mRNA_E-siliculosus-1a_F_contig1156.1014.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1156.1014.1
Unique NamemRNA_E-siliculosus-1a_F_contig1156.1014.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Match: D8LKJ2_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ2_ECTSI)

HSP 1 Score: 920 bits (2379), Expect = 0.000e+0
Identity = 504/581 (86.75%), Postives = 516/581 (88.81%), Query Frame = 1 
Query:    1 MDALYESQHLVKQLGVIFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQRRXXXXXXXXXXQALDSSTSDHPPCGSRVQPLSITTKISERLVSLSNIVCQKSEPLLPLHSSTPSHPCPTFSPFPTATSTPVFFRSPCVHHRELAQRQQERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIAS-PTAAAAVGEDKHAYLSHHHQQYVSNLMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSNXXXXXXGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPSVLPRPPPTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQAPVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCGRQM 1740
            MD LYESQHLVKQLGV+FRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQR XXXXXXXXXX AL SS SDHPPCGSR+QPLSITTKIS+RLVSLSNIVCQKSEPLLPL SSTPSHPC TFS FP AT+TPVFFRSP  HH EL QRQQERHPLFDRPFPLD+LP+DVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALW SLCRC+FPS+AS PTAAA V EDKH+YLSHHHQQYVSN+MHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRG                     XXXXXX   AVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSA RQE+PSVLPRPPPT SNDTA                 GCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFK+LAVFETSEQAEVVRARM NQRLFYCALDRP GQGHPSPAALRV PHISHWGFQQAP RVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLA SSLEALKCGRQM
Sbjct:    1 MDVLYESQHLVKQLGVLFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQRXXXXXXXXXXXXALHSSMSDHPPCGSRIQPLSITTKISDRLVSLSNIVCQKSEPLLPLQSSTPSHPCSTFSSFPAATATPVFFRSPYAHHPELVQRQQERHPLFDRPFPLDQLPEDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWRSLCRCEFPSMASSPTAAAGVREDKHSYLSHHHQQYVSNVMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSALRQESPSVLPRPPPTVSNDTAAVATASRSGGRRTDNGGGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKDLAVFETSEQAEVVRARMANQRLFYCALDRPRGQGHPSPAALRVLPHISHWGFQQAPGRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLASSSLEALKCGRQM 581
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Match: A0A6H5KC80_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC80_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 9.660e-158
Identity = 258/326 (79.14%), Postives = 274/326 (84.05%), Query Frame = 1 
Query:    1 MDALYESQHLVKQLGVIFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQRRXXXXXXXXXXQALDSSTSDHPPCGSRVQPLSITTKISERLVSLSNIVCQKSEPLLPLHSSTPSHPCPTFSPFPTATSTPVFFRSPCVHHRELAQRQQERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIAS-PTAAAAV----------GEDKHAYLSHHHQQYVSNLM----HRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSN 933
            M+ LY+ QHLVKQLGV+FRNIVYPAST LLP YSDRPVA AQPSSSPGHLFHQR XXXXXXXXXX ALDSS SDHPPCGSRVQPLSI TKISERLVSLSNIVCQKS+PLLPLHSSTPSHPCPTFSPFP  T+TPVFF SP  HHREL QRQ+ER+PLFDRPFPLDRLP+DVLPSVLAFLPA ELSGMRR SQ FLQEVDHHG+ALW SLCRCDFPS+AS PTAAA V            +  A L     + ++ +     HRANDQVLNLRSNRHLRKRLYNYTWGNKDPQ+SSRTINMTSGRG TASVSGRIG TSGS PG SN
Sbjct:    1 MNVLYQGQHLVKQLGVLFRNIVYPASTSLLPPYSDRPVAAAQPSSSPGHLFHQRXXXXXXXXXXXPALDSSMSDHPPCGSRVQPLSIKTKISERLVSLSNIVCQKSKPLLPLHSSTPSHPCPTFSPFPAVTATPVFFPSPYAHHRELVQRQEERYPLFDRPFPLDRLPEDVLPSVLAFLPAGELSGMRRVSQTFLQEVDHHGEALWDSLCRCDFPSMASSPTAAAGVWGYSRRPVPFAINSSARLRTTPLKSLAAIRQQRHHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQQSSRTINMTSGRGTTASVSGRIGSTSGSAPGWSN 326
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Match: A0A6H5L1J4_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J4_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 5.420e-107
Identity = 221/435 (50.80%), Postives = 265/435 (60.92%), Query Frame = 1 
Query:  454 QERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIASPTAAAAVGEDKHAYLSHHHQQYVSNLMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSNXXXXXXGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPS-----VLPR--PPPTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQ--APVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCG 1731
            ++R PL+  PFPL  +P+DV  +VL+FLPA ELS +RRAS+ FL   D H D LWG L RCDFPS+A+PT  AA    +       HQQYV N+M RA D+V NLR+N  LR+ L ++TW    P+ ++ T         + ++   I  T G    G + XXXXX    VIGLLSDLVTVPDPRIARALS+K R  LS VVV ND V    RR GLYT  V FL LS    +NP+     +LP   PPP    +                     REE   GA+LLP APE+PAPAGFLGYAVRLL+LRP HE LRWT L A+F++LAVFET+EQAEVVRAR+P++RLFYCALD PG Q  P P   R  PHISHWGF    A   +GG         + G      E V DA+ERQERIAC ARSSL  L+ G
Sbjct:   67 KQRQPLWS-PFPLGLIPEDVRLTVLSFLPAGELSSIRRASRDFLHTADRHADVLWGRLNRCDFPSVAAPTDPAA----QETNCLSPHQQYVKNVMRRAIDEVGNLRANHRLRESLDSFTWPIDWPRGNATT---------SGTIYSAISNTFGGGIDGRSSXXXXXXXXXVIGLLSDLVTVPDPRIARALSYKRRAALSTVVVDNDKVLFDFRRRGLYTGPVNFLPLSTLVVDNPTPLAPLLLPLLLPPPRRIGNVPAGTEDGDG-----------REE---GADLLPRAPESPAPAGFLGYAVRLLRLRPEHEPLRWTALFALFRDLAVFETTEQAEVVRARVPDRRLFYCALDHPGAQDEPCPIGGRSMPHISHWGFHGLLADSGLGGGEG-----EMPGVRDRAGETVGDALERQERIACFARSSLAFLQYG 468
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Match: A0A6H5KB01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB01_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 9.640e-90
Identity = 142/163 (87.12%), Postives = 145/163 (88.96%), Query Frame = 1 
Query: 1255 GCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQAPVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCGRQML 1743
            G REEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFK+LAVF+TSEQAEVVRARM NQR FYCALDRP GQGHPSPA LRV PHISHWGFQQAPVRVGG        H VGSTSFGEEDVD AV RQE+IACLARSSLEALKCGR ML
Sbjct:    8 GRREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKDLAVFKTSEQAEVVRARMANQRRFYCALDRPRGQGHPSPAVLRVLPHISHWGFQQAPVRVGGGGGGRGGEHAVGSTSFGEEDVDAAVARQEKIACLARSSLEALKCGRHML 170
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Match: D8LKK0_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK0_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 2.010e-66
Identity = 172/441 (39.00%), Postives = 200/441 (45.35%), Query Frame = 1 
Query:  457 ERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIASPTAAAAVGEDKHAYLSHHHQQYVSNLMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSNXXXXXXGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPS-----VLPR--PP-------PTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQ--APVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCG 1731
            +R PL+   FPL  +P+DV  +VL+FLPA ELS +RRAS+ FLQ  D H D LWG L RC+FPS+++PT  AA                          Q  N  S                                                                          P  R         R  LS VVV ND V    RR G YT  V FL LS    +NP+     +LP   PP       P G+ D                     REE   GANLLP APE+PAPAGFLGYAVRLL+LRP HE LRWT L A+F++LAVFET+EQAE VRAR+P++RLFYCALD PG Q  P P   R  PHISHWGF    A   +GG         V G      E V DA+ERQER AC ARSSL  L+ G
Sbjct:   67 QRQPLWSS-FPLGLIPEDVRLTVLSFLPAGELSSIRRASRDFLQTADRHADVLWGRLNRCEFPSVSAPTGPAA--------------------------QETNCLS--------------------------------------------------------------------------PHQR---------RAALSTVVVDNDKVLFDFRRRGFYTGPVNFLPLSTLVMDNPTPLAPLLLPLLLPPQRRIGIVPAGTEDGDG------------------REE---GANLLPRAPESPAPAGFLGYAVRLLRLRPEHEPLRWTALFALFRDLAVFETTEQAEAVRARVPDRRLFYCALDHPGAQDEPCPPGGRSLPHISHWGFHGVLADSGLGGGEG-----EVPGVRDRAGETVGDALERQERTACFARSSLAFLQYG 371
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BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Match: A0A2R5GMN1_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMN1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.980e-5
Identity = 69/268 (25.75%), Postives = 108/268 (40.30%), Query Frame = 1 
Query:  958 GAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPSVLPRPPPTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRAR--MPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQAPVRVGGXXXXXXXXHVVGSTS--------FGEEDVDDA--VERQERIACLARSSLEALK 1725
            GAV+ L+S++    D  I+ A+S   ++ +S V++   N +   R+   Y   V F S     Q+N S L  P P+                                     +A +     GFLGYAV L++L P  E +R+T LLA +KNL V+ + ++    RA   +P+  +  CA+D        +PA++   P       +  P+R  G         +  STS         G  D +DA  +ER E       S +  LK
Sbjct:  162 GAVVRLVSNIGYFDDAAISLAVSSYRQYAMSAVILSRSNDAIVFRKCTDYRGPVSFYS-----QDNISTLLTPHPS-------------------------------------IAMQPIRAPGFLGYAVNLVRLSPDEEYMRYTFLLAAYKNLTVWASEKELRAARASGALPDT-VSACAIDAF------APASIAETPEADAEARRNVPLRPSGLSASSSHSSLSTSTSNVTRPAAAIGLPDDEDAPDLERPEAPTSSPASPMTPLK 380
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1156.1014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LKJ2_ECTSI0.000e+086.75F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KC80_9PHAE9.660e-15879.14F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L1J4_9PHAE5.420e-10750.80F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KB01_9PHAE9.640e-9087.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKK0_ECTSI2.010e-6639.00F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A2R5GMN1_9STRA1.980e-525.75Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1156contigE-siliculosus-1a_F_contig1156:3822..6566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1746
Model size1746
Exons3
Ec32 orthologEc-16_003160.1
Ec32 ortholog descriptionF-box domain
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1156.1014.1prot_E-siliculosus-1a_F_contig1156.1014.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1156 3822..6566 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927670.4517791-CDS-E-siliculosus-1a_F_contig1156:3821..41271622927670.4517791-CDS-E-siliculosus-1a_F_contig1156:3821..4127Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1156 3822..4127 -
1696318632.9498844-CDS-E-siliculosus-1a_F_contig1156:3821..41271696318632.9498844-CDS-E-siliculosus-1a_F_contig1156:3821..4127Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1156 3822..4127 -
1622927670.4692178-CDS-E-siliculosus-1a_F_contig1156:4393..51161622927670.4692178-CDS-E-siliculosus-1a_F_contig1156:4393..5116Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1156 4394..5116 -
1696318632.9585502-CDS-E-siliculosus-1a_F_contig1156:4393..51161696318632.9585502-CDS-E-siliculosus-1a_F_contig1156:4393..5116Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1156 4394..5116 -
1622927670.483711-CDS-E-siliculosus-1a_F_contig1156:5849..65661622927670.483711-CDS-E-siliculosus-1a_F_contig1156:5849..6566Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1156 5850..6566 -
1696318632.9674883-CDS-E-siliculosus-1a_F_contig1156:5849..65661696318632.9674883-CDS-E-siliculosus-1a_F_contig1156:5849..6566Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1156 5850..6566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1156.1014.1

>prot_E-siliculosus-1a_F_contig1156.1014.1 ID=prot_E-siliculosus-1a_F_contig1156.1014.1|Name=mRNA_E-siliculosus-1a_F_contig1156.1014.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=582bp
MDALYESQHLVKQLGVIFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHL
FHQRRQQHQEEQQQRQALDSSTSDHPPCGSRVQPLSITTKISERLVSLSN
IVCQKSEPLLPLHSSTPSHPCPTFSPFPTATSTPVFFRSPCVHHRELAQR
QQERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDH
HGDALWGSLCRCDFPSIASPTAAAAVGEDKHAYLSHHHQQYVSNLMHRAN
DQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIG
RTSGSFPGGSNGGNGGDGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLS
RVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPSVLPRPPPTGSNDT
AAVATASRSGGRRTDDGGGCREEVEAGANLLPLAPETPAPAGFLGYAVRL
LQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDR
PGGQGHPSPAALRVFPHISHWGFQQAPVRVGGGGGGRGGGHVVGSTSFGE
EDVDDAVERQERIACLARSSLEALKCGRQML*
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mRNA from alignment at E-siliculosus-1a_F_contig1156:3822..6566-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1156.1014.1 ID=mRNA_E-siliculosus-1a_F_contig1156.1014.1|Name=mRNA_E-siliculosus-1a_F_contig1156.1014.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2745bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1156:3822..6566- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGCCCTCTACGAAAGCCAACACCTCGTCAAACAGCTCGGCGTTAT
ATTTCGGAACATCGTCTACCCAGCAAGCACGCCCCTCCTACCTCTTTACT
CCGATCGACCCGTCGCCACCGCCCAGCCCTCGTCATCGCCGGGCCATCTT
TTTCACCAGCGGCGACAGCAGCATCAAGAAGAGCAGCAGCAGCGACAGGC
CCTCGACTCGTCGACGTCTGATCACCCGCCGTGTGGATCCCGCGTACAAC
CACTCTCGATAACGACGAAGATCAGTGAACGCCTAGTGTCTCTTTCAAAC
ATCGTCTGCCAGAAAAGCGAGCCCCTCTTGCCTCTACACAGCAGCACTCC
CAGCCACCCCTGCCCCACCTTCAGCCCATTCCCCACAGCCACCTCGACCC
CCGTCTTTTTCCGATCTCCATGCGTCCATCACCGGGAGCTGGCCCAGCGG
CAGCAGGAACGACACCCCTTGTTCGACAGGCCGTTCCCGTTGGACCGGCT
GCCGGACGATGTCCTACCGAGCGTTCTGGCGTTCTTGCCGGCAAGAGAGC
TGTCCGGCATGCGAAGGGCGAGCCAGAGGTTCCTTCAGGAAGTCGACCAT
CATGGTGACGCCCTTTGGGGTAGCCTTTGCCGCTGCGACTTCCCGTCCAT
AGCGTCACCAACGGCAGCGGCAGCGGTTGGAGAAGATAAACATGCATACC
TCTCCCATCACCACCAGGTCAGTGCTTTTGGATTGTGTTTCCACATCGCT
GTAGTAGCGCCGTTGTGTGGAGTGTAACGCTGTCGGCGCATTGACGATAG
AGGTTTGGCGTGAAACTGTGACATCGCGAGAGGGTTTTTTGCCTCAACAC
TCGCTGCGTCATTTTTGGCCAGATATTCAAACGATCAGTATTTTTCCCGC
CATAGTCTACCCAGATAGGCCCAAAGTCGTCCTGAAGCTCTCTCTCTCTC
TCTGGCACCAAAAGCATGTTGTCGACATCAGCCCCCCAAATGTGTTCTTT
GGTGCTATTTACTATTGTTGCTCGTACTAAAAGCCAGCGTTTTCCTCCGC
TCGAGCGCAAAATATTGTCGGAGGAAAAGCGTGTCGCAGCCGCTCAGCAG
TCCCTTCAAACACCACAAGCATCGTTGAGCGACCGCTCATACTTCTGTCC
AGACGTCGCCCAAAAGTTCACACTCGTGTACAACCGTTCATCGGTTTAGA
TTCGCTCATGTAATTTTTCCGAAGAGAACGTCCTTTCCAAGCCTACATCT
CGGCGTTTACACCCTCGTGCTTGAACATGGTCCGTTGATGGGTCCCTTGA
GCAGCAATAGATACCAACAAGCACCAACGCCACGTGCCAAATACCTGGCA
TGGACGCATCAATTCCGGGCAGGTAACAGTCGTCGCCCTGTTCCTTTCGC
GATTCACTCCTCTGCGCGTCTTCGTACGACCCCACTCAAATCCCTCGCAG
CAATACGTCAGCAACCTCATGCACCGGGCGAATGACCAAGTGCTAAACCT
CCGCTCCAACCGCCACCTCCGCAAGCGACTCTACAACTACACCTGGGGGA
ACAAAGACCCCCAAAAGAGCAGCAGGACGATCAACATGACGAGTGGCAGG
GGCGACACGGCCTCGGTCAGCGGCAGGATCGGCAGAACCAGCGGCAGCTT
TCCAGGCGGGAGCAACGGGGGCAACGGCGGTGACGGCAGCGGCGCCGTAA
TCGGCCTCCTGTCCGACCTCGTTACCGTTCCGGACCCACGCATCGCCCGC
GCCCTGTCCTTCAAATGCCGCTTCGTCCTGTCCAGGGTAGTCGTTGTCAA
CGACAACGTCAGCTCCAGCATCCGTCGCAGTGGCCTGTACACCGAACGCG
TTGAATTCTTGTCTCTCAGCGCGTTTCGCCAGGAAAACCCCTCCGTGCTG
CCGCGGCCGCCGCCGACCGGTAGCAATGACACAGCCGCTGTTGCTACCGC
TTCGCGCTCAGGGGGGAGGCGCACCGATGATGGTGGCGGTTGCCGGGAGG
AGGTAGAGGCCGGTGCCAATCTCCTGCCTCTGGCGCCGGAGACGCCCGCC
CCGGCTGGGTTCCTCGGGTACGCCGTGCGGCTGTTGCAGCTGCGGCCTGG
GCACGAGTCGCTACGGTGGACGGTGTTGTTGGCGGTCTTCAAGAACTTGG
CGGTGTTCGAGACTTCCGAGCAGGTGAACATAGTTCGCCTTTGAGTGTGC
ATCATATTGTAGCTGTTGAAATTGTTTTGTGGGCCACCACCCTGCCGCCC
ATGGAACGTAGGACACTGTTACGTTTTTCGATAGCGCCCGTTCTGGCGGA
CCGAGTCGTTCCACAAGGATGACGCACACGCTCCTAGTTATCCGCACCTA
GGGTTGAATGAAGCGTCACATCTTGTATTTGTCCCCTAAGCAAGGCTCGA
AACATTTCCCCCCTCTCTTCCGCCAACGATAAACTTCAGGCGGAGGTTGT
GCGTGCTCGTATGCCGAACCAACGGCTCTTCTACTGCGCGCTCGATCGCC
CTGGGGGCCAAGGCCACCCGTCTCCTGCGGCCTTAAGGGTGTTTCCGCAT
ATCAGTCACTGGGGTTTTCAACAAGCACCTGTTCGCGTCGGCGGAGGTGG
TGGTGGCAGAGGCGGGGGGCATGTGGTGGGTTCCACTTCCTTTGGGGAGG
AGGACGTTGATGACGCCGTGGAAAGGCAGGAGAGGATCGCTTGTCTGGCC
AGAAGCTCGTTGGAGGCCCTCAAGTGTGGCAGACAGATGTTATGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1156:3822..6566-

>mRNA_E-siliculosus-1a_F_contig1156.1014.1 ID=mRNA_E-siliculosus-1a_F_contig1156.1014.1|Name=mRNA_E-siliculosus-1a_F_contig1156.1014.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3492bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1156:3822..6566- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGCCCTCTACGAAAGCCAACACCTCGTCAAACAGCTCGGCGTTAT
ATTTCGGAACATCGTCTACCCAGCAAGCACGCCCCTCCTACCTCTTTACT
CCGATCGACCCGTCGCCACCGCCCAGCCCTCGTCATCGCCGGGCCATCTT
TTTCACCAGCGGCGACAGCAGCATCAAGAAGAGCAGCAGCAGCGACAGGC
CCTCGACTCGTCGACGTCTGATCACCCGCCGTGTGGATCCCGCGTACAAC
CACTCTCGATAACGACGAAGATCAGTGAACGCCTAGTGTCTCTTTCAAAC
ATCGTCTGCCAGAAAAGCGAGCCCCTCTTGCCTCTACACAGCAGCACTCC
CAGCCACCCCTGCCCCACCTTCAGCCCATTCCCCACAGCCACCTCGACCC
CCGTCTTTTTCCGATCTCCATGCGTCCATCACCGGGAGCTGGCCCAGCGG
CAGCAGGAACGACACCCCTTGTTCGACAGGCCGTTCCCGTTGGACCGGCT
GCCGGACGATGTCCTACCGAGCGTTCTGGCGTTCTTGCCGGCAAGAGAGC
TGTCCGGCATGCGAAGGGCGAGCCAGAGGTTCCTTCAGGAAGTCGACCAT
CATGGTGACGCCCTTTGGGGTAGCCTTTGCCGCTGCGACTTCCCGTCCAT
AGCGTCACCAACGGCAGCGGCAGCGGTTGGAGAAGATAAACATGCATACC
TCTCCCATCACCACCAGATGGACGCCCTCTACGAAAGCCAACACCTCGTC
AAACAGCTCGGCGTTATATTTCGGAACATCGTCTACCCAGCAAGCACGCC
CCTCCTACCTCTTTACTCCGATCGACCCGTCGCCACCGCCCAGCCCTCGT
CATCGCCGGGCCATCTTTTTCACCAGCGGCGACAGCAGCATCAAGAAGAG
CAGCAGCAGCGACAGGCCCTCGACTCGTCGACGTCTGATCACCCGCCGTG
TGGATCCCGCGTACAACCACTCTCGATAACGACGAAGATCAGTGAACGCC
TAGTGTCTCTTTCAAACATCGTCTGCCAGAAAAGCGAGCCCCTCTTGCCT
CTACACAGCAGCACTCCCAGCCACCCCTGCCCCACCTTCAGCCCATTCCC
CACAGCCACCTCGACCCCCGTCTTTTTCCGATCTCCATGCGTCCATCACC
GGGAGCTGGCCCAGCGGCAGCAGGAACGACACCCCTTGTTCGACAGGCCG
TTCCCGTTGGACCGGCTGCCGGACGATGTCCTACCGAGCGTTCTGGCGTT
CTTGCCGGCAAGAGAGCTGTCCGGCATGCGAAGGGCGAGCCAGAGGTTCC
TTCAGGAAGTCGACCATCATGGTGACGCCCTTTGGGGTAGCCTTTGCCGC
TGCGACTTCCCGTCCATAGCGTCACCAACGGCAGCGGCAGCGGTTGGAGA
AGATAAACATGCATACCTCTCCCATCACCACCAGCAATACGTCAGCAACC
TCATGCACCGGGCGAATGACCAAGTGCTAAACCTCCGCTCCAACCGCCAC
CTCCGCAAGCGACTCTACAACTACACCTGGGGGAACAAAGACCCCCAAAA
GAGCAGCAGGACGATCAACATGACGAGTGGCAGGGGCGACACGGCCTCGG
TCAGCGGCAGGATCGGCAGAACCAGCGGCAGCTTTCCAGGCGGGAGCAAC
GGGGGCAACGGCGGTGACGGCAGCGGCGCCGTAATCGGCCTCCTGTCCGA
CCTCGTTACCGTTCCGGACCCACGCATCGCCCGCGCCCTGTCCTTCAAAT
GCCGCTTCGTCCTGTCCAGGGTAGTCGTTGTCAACGACAACGTCAGCTCC
AGCATCCGTCGCAGTGGCCTGTACACCGAACGCGTTGAATTCTTGTCTCT
CAGCGCGTTTCGCCAGGAAAACCCCTCCGTGCTGCCGCGGCCGCCGCCGA
CCGGTAGCAATGACACAGCCGCTGTTGCTACCGCTTCGCGCTCAGGGGGG
AGGCGCACCGATGATGGTGGCGGTTGCCGGGAGGAGGTAGAGGCCGGTGC
CAATCTCCTGCCTCTGGCGCCGGAGACGCCCGCCCCGGCTGGGTTCCTCG
GGTACGCCGTGCGGCTGTTGCAGCTGCGGCCTGGGCACGAGTCGCTACGG
TGGACGGTGTTGTTGGCGGTCTTCAAGAACTTGGCGGTGTTCGAGACTTC
CGAGCAGCAATACGTCAGCAACCTCATGCACCGGGCGAATGACCAAGTGC
TAAACCTCCGCTCCAACCGCCACCTCCGCAAGCGACTCTACAACTACACC
TGGGGGAACAAAGACCCCCAAAAGAGCAGCAGGACGATCAACATGACGAG
TGGCAGGGGCGACACGGCCTCGGTCAGCGGCAGGATCGGCAGAACCAGCG
GCAGCTTTCCAGGCGGGAGCAACGGGGGCAACGGCGGTGACGGCAGCGGC
GCCGTAATCGGCCTCCTGTCCGACCTCGTTACCGTTCCGGACCCACGCAT
CGCCCGCGCCCTGTCCTTCAAATGCCGCTTCGTCCTGTCCAGGGTAGTCG
TTGTCAACGACAACGTCAGCTCCAGCATCCGTCGCAGTGGCCTGTACACC
GAACGCGTTGAATTCTTGTCTCTCAGCGCGTTTCGCCAGGAAAACCCCTC
CGTGCTGCCGCGGCCGCCGCCGACCGGTAGCAATGACACAGCCGCTGTTG
CTACCGCTTCGCGCTCAGGGGGGAGGCGCACCGATGATGGTGGCGGTTGC
CGGGAGGAGGTAGAGGCCGGTGCCAATCTCCTGCCTCTGGCGCCGGAGAC
GCCCGCCCCGGCTGGGTTCCTCGGGTACGCCGTGCGGCTGTTGCAGCTGC
GGCCTGGGCACGAGTCGCTACGGTGGACGGTGTTGTTGGCGGTCTTCAAG
AACTTGGCGGTGTTCGAGACTTCCGAGCAGGCGGAGGTTGTGCGTGCTCG
TATGCCGAACCAACGGCTCTTCTACTGCGCGCTCGATCGCCCTGGGGGCC
AAGGCCACCCGTCTCCTGCGGCCTTAAGGGTGTTTCCGCATATCAGTCAC
TGGGGTTTTCAACAAGCACCTGTTCGCGTCGGCGGAGGTGGTGGTGGCAG
AGGCGGGGGGCATGTGGTGGGTTCCACTTCCTTTGGGGAGGAGGACGTTG
ATGACGCCGTGGAAAGGCAGGAGAGGATCGCTTGTCTGGCCAGAAGCTCG
TTGGAGGCCCTCAAGTGTGGCAGACAGATGTTATGAGCGGAGGTTGTGCG
TGCTCGTATGCCGAACCAACGGCTCTTCTACTGCGCGCTCGATCGCCCTG
GGGGCCAAGGCCACCCGTCTCCTGCGGCCTTAAGGGTGTTTCCGCATATC
AGTCACTGGGGTTTTCAACAAGCACCTGTTCGCGTCGGCGGAGGTGGTGG
TGGCAGAGGCGGGGGGCATGTGGTGGGTTCCACTTCCTTTGGGGAGGAGG
ACGTTGATGACGCCGTGGAAAGGCAGGAGAGGATCGCTTGTCTGGCCAGA
AGCTCGTTGGAGGCCCTCAAGTGTGGCAGACAGATGTTATGA
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