mRNA_E-siliculosus-1a_F_contig1155.1010.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: D8LN58_ECTSI (Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN58_ECTSI) HSP 1 Score: 1552 bits (4018), Expect = 0.000e+0 Identity = 1006/1142 (88.09%), Postives = 1024/1142 (89.67%), Query Frame = 1
Query: 331 MPSSQQQGREWHRCTGCGVDRSHSGSGRRRRLQAVAAESDSPNTNHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PRPPQGVSPSSGGRSVGAAVAPRTQSAAPISIESIASTLESGQSQTSTARGNGXNPSHQQQQQVWRDNSFDQRGRGDAAAVGLRSRNTEERGGGGADQEPGYDDGRNGFPGGRAGAANAARDPGVVGGGDAVGEEKSRGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVVVEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPVAAAPSIPINGDAGGVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIPHTKLLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLDKLMPAPRKAHPNINADSPPGESHDGSARDVAVVGAGGGARTGGAEDDTLRKVGGLLQSMRVRKQHSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTTGGLSRDSPYARVLAEDAARVKDRLDEARFADVLSDDGIIEGSVRQQPFVSGHDGSERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPVPAAPKATPGDPDSISTTTGGAASQPSPGVRHMGERGAREVLPPETSRSTAADAIEDRPKEDGAGEGVSDVDETASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA 3744
MPSSQQ GREWHRCTGCGVDRS S SGR RRLQAVA ESDSPNT XXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+PPQGVSPSSGGRSVGAAVAPRTQSAAPISIESIASTLESGQSQTS+AR NG NPS QQQQQVWRD+SFDQRGRGDAAA GLRSRNTEE G G DQEPGYDDGRNGFPGGRAG ANAARDPGVV GGD VGEE+S+GNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVV+EMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVP+AA PSIPINGDAG VGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERP SCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSR HTK+LARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTY LKDIMGKG NPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLDKLMP PRK HPNI+ADSPPGE++DGSARDVA+V +GGGARTGGAEDDTLRKVGGLLQSMRVRKQHSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTTGG+SRDSPYARVLA DAARVKDR ++ GS + PPAPVPAAPKATP DPDSISTTTGGAASQP PG+RH GERGAR VLPPETSRSTAADAIED KEDGA E VSDVDETASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA
Sbjct: 1 MPSSQQHGREWHRCTGCGVDRSRSDSGRSRRLQAVAEESDSPNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPPQGVSPSSGGRSVGAAVAPRTQSAAPISIESIASTLESGQSQTSSARSNGNNPSDQQQQQVWRDSSFDQRGRGDAAAAGLRSRNTEEPGWVGDDQEPGYDDGRNGFPGGRAGVANAARDPGVVEGGDIVGEEQSKGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPLAATPSIPINGDAGAVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPHSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSR-----HTKMLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYPLKDIMGKGLNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLDKLMPTPRKTHPNIHADSPPGETNDGSARDVAMVSSGGGARTGGAEDDTLRKVGGLLQSMRVRKQHSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTTGGVSRDSPYARVLAADAARVKDRGEDV-------------GSAAAAAAI----------------------------------------------------PPAPVPAAPKATPRDPDSISTTTGGAASQP-PGIRHTGERGARAVLPPETSRSTAADAIEDSLKEDGAEERVSDVDETASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA 1071
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A6H5KNL2_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL2_9PHAE) HSP 1 Score: 774 bits (1999), Expect = 1.510e-265 Identity = 565/635 (88.98%), Postives = 574/635 (90.39%), Query Frame = 1
Query: 64 MKQRSQLGVCSCQAATAIRERKQRGRRGALHGSRATQQPAREGGRSVMPXXXXXXXXXVLSPELCSGFTAGLSAVATRSCWAPSRGGVSMPSSQQQGREWHRCTGCGVDRSHSGSGRRRRLQAVAAESDSPNTNHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-RPPQGVSPSSGGRSVGAAVAPRTQSAAPISIESIASTLESGQSQTSTARGNGXNPSHQQQQQVWRDNSFDQRGRGDAAAVGLRSRNTEERGGGGADQEPGYDDGRNGFPGGRAGAANAARDPGVVGGGDAVGEEKSRGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVVVEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPVAAAPSIPINGDAGGVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIP 1965
M+QR QLGV CQA TAIRERKQRGRRGALHGSRATQQ AREGGRSV PXXXXXXXXXVLSPELCSGFT GLSAV TRSCWAPSR GVSMPSSQQ GREWH CTG GVDRS S SGR RRLQ VAAESDSPN+N XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PPQGVSPSS GRSVGAAVAPRTQSAAPISIESIAS LE GQSQTSTAR X QQVWRD+SFD+RGRGDAAA GLRSRNTEERG GGADQEPGY GRNGFPGGRAGAANA RDPGVVGGGD VGEEKS+GNPNKLSLRKRRAR ETPEEKQLQNE+ALALKADSAEE LRSFNTAMEMGVALRANLLRGVLNQCAKAGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLL+MSYHARNLTMGQVEQLEEHFNAVP+AAAPSIPINGDAG VGDTNA AITE SSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIP
Sbjct: 1 MEQRPQLGVSGCQAVTAIRERKQRGRRGALHGSRATQQSAREGGRSVTPXXXXXXXXXVLSPELCSGFTTGLSAVTTRSCWAPSRRGVSMPSSQQHGREWHGCTGRGVDRSRSESGRSRRLQTVAAESDSPNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVQPPQGVSPSSSGRSVGAAVAPRTQSAAPISIESIASLLERGQSQTSTARXXXXXXXXXXXQQVWRDDSFDKRGRGDAAAAGLRSRNTEERGAGGADQEPGYHGGRNGFPGGRAGAANAVRDPGVVGGGDTVGEEKSKGNPNKLSLRKRRARXXXXETPEEKQLQNEIALALKADSAEEALRSFNTAMEMGVALRANLLRGVLNQCAKAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLDMSYHARNLTMGQVEQLEEHFNAVPLAAAPSIPINGDAGAVGDTNACAITEI--SSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIP 633
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A6H5KMI6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI6_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.190e-71 Identity = 176/227 (77.53%), Postives = 179/227 (78.85%), Query Frame = 1
Query: 3064 AQTTGGLSRDSPYARVLAEDAARVKDRLDEARFADVLSDDGIIEGSVRQQPFVSGHDGSERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPVPAAPKATPGDPDSISTTTGGAASQPSPGVRHMGERGAREVLPPETSRSTAADAIEDRPKEDGAGEGVSDVDETASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA 3744
AQTTGGLSRDSPYARVLAEDAARVKDRLDEARFA+VLSDDGI+E VRQQ FVSGHD SERQXXXXXXXXXXXXX XXXXXXXXX PAPVPAAP+ P DPDSISTT PGVRH GERGARE LPPETSRSTA DAIED KEDG E V DVDE ASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA
Sbjct: 55 AQTTGGLSRDSPYARVLAEDAARVKDRLDEARFAEVLSDDGILEDPVRQQAFVSGHDESERQXXXXXXXXXXXXXLAGERRPPVEVRKVDDVGXXXXXXXXX----PAPVPAAPRVLPRDPDSISTTXXXXXXXX-PGVRHTGERGAREALPPETSRSTATDAIEDCLKEDGVREDVPDVDEPASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA 276
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.270e-35 Identity = 125/419 (29.83%), Postives = 184/419 (43.91%), Query Frame = 1
Query: 1468 YVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNA---VPVAAAPSIPINGDAGGVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIPHTKLLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGS--AFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYE-------------------CSDEASDDWYWMYATVAFDDI--PMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQ 2646
YV L G S++G+LW +G++D L E+SY L +EQL++ FNA PVA+ S+ ++GG G SCPAC L+A+GLT ER ++R L +A + + ++ A S + L F WL +RA +TAV+D+ NVAYH + F + QVD +VQ LEA+GER LV+ E+Y+ + R + +P AI++ W K LY C++ +DDWYWMY TVAFD++ P+TV+SND RDHR++L E P++RW+ TQ ++ Y + +GS +V + PP FTRD+Q
Sbjct: 173 YVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDGDLIEQLQQAFNAGLQEPVASMVSV----ESGGKG--------------------------------------------------SCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAK----------ASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLR-ERA---KFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQ----QMRYYFPRVALEGSTESL------EVDLFDPPPFTRDIQ 513
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A7S3XLJ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ8_HETAK) HSP 1 Score: 104 bits (259), Expect = 4.640e-21 Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 2197 LEAKGERPLVLIAEKYIDR-----VGDLYDNSPARGGFRYMSNPLN---KAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIP------------MTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYSLKDIMGKGSNPQGWPANPPQVA-IQPPPAFTRDVQKSEQGCWHVPAGADDE 2694
+E+ G R LV+I E+Y+DR + ++ A G F + S P+ + I+ +W A+ +Y + +DDWYWMYATV D + V++ND+ RDHR+SL P+ RWR+TQ+ F++ +DI P VA + PP F+R+VQ ++ G WHVP ++
Sbjct: 1 MESMGHRVLVVIPERYMDREKIPNTTRIKKSNRASGKFYHPSEPVTDEQREIMDKWTAQGDIYTVAKHNNDDWYWMYATVVNRDGQAEEEEEDKEGHRLMVVTNDKMRDHRLSLLTPRPFFRWRSTQIMNFDIRKE-QDI-------------PYLVATVLDPPVFSREVQMTDNGVWHVPIAEKED 173
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A1Z5J5P3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5P3_FISSO) HSP 1 Score: 107 bits (267), Expect = 4.810e-20 Identity = 96/321 (29.91%), Postives = 150/321 (46.73%), Query Frame = 1
Query: 1831 CPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIPHTKLLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDD------------IPMT-----VISNDRTRDHRMSLAETVPYLRWRTTQLAQFEL-TYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQKSE-QGC----WHVPAG--ADDEWLCIDVQR 2718
CPA G LR + LT +R ++ +TL +AG Q +++ KL AR + + N Y+ +EQL+ F DWL + YTA++D NVAY H+S QV +VQ L+ GERPLV++ +KY+ R L G + + N ++AI+ + K +Y DD+YWM A+VA P+T +I+ND+ RDHR++L E + RW + + + L T KD GK N + + P F+ ++Q + QG WH P ++ E C +++
Sbjct: 348 CPATGVTLRLMALTPSQRQQVHDTLLEMAGTQHEEYG---------AKLQARGKAMEEKRNGQYA------QEQLRQFSDWLKQRET---PYTAIVDGPNVAYFGHGNVHYS--QVWEVVQELQRLGERPLVVMPQKYLSRSFWL----SGLGKVQEL-NDQDQAIIDK--LKDCMYVVPSTCLDDYYWMLASVAEQGSTDFVIVQQDQMFPLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKDGNGKAVNGEECSY---ETKFFPAQVFSGEIQGNGIQGTDTMVWHFPVSGWSESERFCFCLRQ 638
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A1Z5KPE3_FISSO (Ribonuclease P n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPE3_FISSO) HSP 1 Score: 104 bits (260), Expect = 3.340e-19 Identity = 93/317 (29.34%), Postives = 148/317 (46.69%), Query Frame = 1
Query: 1831 CPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIPHTKLLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVA-----------------FDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFEL-TYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQKSE-QGC----WHVPAG--ADDEWLCI 2706
CPA G LR + LT +R ++ +TL +AG Q +++ KL AR + + N ++ +EQL+ F DWL + +YTA++D NVAY H+S QV +VQ L+ GERPLV++ +KY+ R L G + +S+ ++AI+ + K +Y DD+YWM A+VA + +I+ND+ RDHR++L E + RW + + + L T KD GK N + + P F+ ++Q + QG WH P ++ E C+
Sbjct: 345 CPATGVTLRLMALTPPQRQQVHDTLLEMAGTQHEEYG---------AKLQARGKAMEEKRNGQFA------QEQLRQFSDWLKQRET---SYTAIVDGPNVAYFGHGNVHYS--QVWEVVQELQRLGERPLVVMPQKYLSRSFWL----SGLGKVQELSDQ-DQAIIDK--LKDCMYVVQSTCLDDYYWMIASVADQGSTDFATLQKDQTFQLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKDGDGKAVNGEECSY---ETKFFPAQLFSGEIQGNGLQGTDTIVWHFPVSGWSESERFCV 631
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A6V7Q716_ANACO (PRORP domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q716_ANACO) HSP 1 Score: 87.0 bits (214), Expect = 4.100e-15 Identity = 61/221 (27.60%), Postives = 96/221 (43.44%), Query Frame = 1
Query: 2062 FVDWLHAQRADGKTYTAVIDSANVAYHKGSAFH-FSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDE------WLC 2703
F +WL + AVID+ANV + F F L V ++ + + PL+++ + + + PA P NK +++ WR LY ++DDWYW+YA V+ + V++ND RDH L T + RW+ Q LT+S + A PP ++R +Q+SE G WH+P D+ W+C
Sbjct: 47 FQEWLERNGP----FDAVIDAANVGLYNQKNFSLFQLNSVVNGMRQMSRSNKLPLIVLHSRRVK-------SGPADA-------PNNKKLIESWRRAGTLYATPPGSNDDWYWLYAAVSCRSL---VVTNDEMRDHLFQLLGTSFFPRWKEKH--QVRLTFSRRG-----------------PAFHMPPPYSRVIQESEGGSWHIPTLTGDDIEAPRQWIC 227
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A7C9AEA4_OPUST (Ribonuclease P (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AEA4_OPUST) HSP 1 Score: 91.7 bits (226), Expect = 5.650e-15 Identity = 57/210 (27.14%), Postives = 98/210 (46.67%), Query Frame = 1
Query: 2104 YTAVIDSANVAYHKGSAFHFSLPQVDLMVQALE---AKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDE------WLCI 2706
+ AV+D+ANV S +F +V+L+V L + PL+++ K + M+ P+NKA+V++W+ LY ++DDWYW+YA + F +++ND RDH L T + +W+ +F + A P Q PP+++ +Q+SE+G WH+P ++++ WLCI
Sbjct: 617 FEAVVDAANVGLL--SQMNFRPSKVNLLVNGLRHLLPSRKWPLIIVHNKRLTG--------------NKMNQPVNKALVEKWKKAGALYATPTGSNDDWYWLYAAIKF---KCLIVTNDEMRDHTFQLLGTDFFPKWKERHQVRFSFSE----------------AGP---VFQMPPSYSVVIQESERGHWHIPVASENQSEGDRIWLCI 788
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Match: A0A448ZE27_9STRA (Ribonuclease P n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE27_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.190e-14 Identity = 83/323 (25.70%), Postives = 138/323 (42.72%), Query Frame = 1
Query: 1816 ERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARIPHTKLLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFH--FSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLN---KAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDD--IPMT------------VISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYSLKDIMGKGSNPQGWPANPPQVAIQPPPAFTRDVQ--KSEQGC-WHVPAGA--DDEWLCIDV 2712
E C G LR + L ++ + R+ L L ++ R+ R D E+L+ F DWL Q+ DGK++TA+ID N+AY+ + F+ Q+ + ALE GE+ LV++ +KY YD+ + G R + L+ K I +K + + DD+YWM+A+V+ D+ +P +ISND+ RDH+MSL E + RW + L F + + D ++ + ++R++Q E G WH P ++E +CI +
Sbjct: 749 ETTGKCARSGSQLRLINLDSAQKKKFRDGLLYLVSSSYQERHRNARK--------------------------VDVAEKLKRFGDWL--QKKDGKSFTAIIDGPNIAYYMQNFQQGTFNYHQIKFVADALENMGEKILVVLPKKYT------YDSFTIQVGGRTVKQTLSLEEKQIRDDLLSKGKACVVPVGSLDDYYWMFASVSMDEEFVPPNNAEGRWPGNRPMLISNDKLRDHKMSLLEPRLFRRWYSNFLVNFTFSAFVNDE-----------CTDREIGFRTADFYSREIQGNSDENGTTWHFPVTDWDENESMCIRI 1026 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1155.1010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1155.1010.1 >prot_E-siliculosus-1a_F_contig1155.1010.1 ID=prot_E-siliculosus-1a_F_contig1155.1010.1|Name=mRNA_E-siliculosus-1a_F_contig1155.1010.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1249bp AGSSATSARHNQHVTCSRGQPMKQRSQLGVCSCQAATAIRERKQRGRRGAback to top mRNA from alignment at E-siliculosus-1a_F_contig1155:1204..17790- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1155.1010.1 ID=mRNA_E-siliculosus-1a_F_contig1155.1010.1|Name=mRNA_E-siliculosus-1a_F_contig1155.1010.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=16587bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1155:1204..17790- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1155:1204..17790- >mRNA_E-siliculosus-1a_F_contig1155.1010.1 ID=mRNA_E-siliculosus-1a_F_contig1155.1010.1|Name=mRNA_E-siliculosus-1a_F_contig1155.1010.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=7494bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1155:1204..17790- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |