mRNA_E-siliculosus-1a_F_contig1152.998.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: A0A6H5KQ88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ88_9PHAE) HSP 1 Score: 353 bits (906), Expect = 7.410e-118 Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPI WLD+FFEACGGDVE RDFCGIT+IAIHSYT
Sbjct: 58 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPIKWLDDFFEACGGDVEGRDFCGITYIAIHSYT 224
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI) HSP 1 Score: 357 bits (915), Expect = 1.340e-115 Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
PTQCSSKRGVAFGFKES DLYTLK GISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT
Sbjct: 95 PTQCSSKRGVAFGFKESGDLYTLKTGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 261
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 199 bits (506), Expect = 4.040e-57 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
PT+C KRGV+F FK++DDL L G+SWWY+WSP +A + A + G Y+PMIWGE DL RL +LA +G +S ++LGFNEPN+G QANLTPQEAA LW V+ +A LG E+VSPAVNFC G+C +EDP WLD+FF AC G C +T IA+H YT
Sbjct: 126 PTECHGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLANLASLGQSS-HMLGFNEPNFGSQANLTPQEAAALWSTVKSEAATLGAEIVSPAVNFCGGDCTKEDPYEWLDDFFSACEG-------CDVTAIAVHIYT 284
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: A0A0K1E7A5_CHOCO (Glyco_hydro_cc domain-containing protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1E7A5_CHOCO) HSP 1 Score: 153 bits (386), Expect = 1.510e-42 Identity = 81/171 (47.37%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSP----YLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
PT C KRGVA+G+ D+ L +SWWY+W+ +A T G YVPM+WG G L R +A D P +LLGFNEPN+GEQANL+ EAA LWP V A G+ELVSPAVN+C G+C E DP T+LD+FF AC G C + I +H YT
Sbjct: 64 PTGC--KRGVAYGYHSQADMLALSPAVSWWYNWTHVPDEGVRPDAYTTIGVEYVPMVWGGGGLDAARATQIA---DEMPGGVRFLLGFNEPNFGEQANLSASEAAALWPHVEAIASARGLELVSPAVNYCGGSCQETDPFTYLDDFFAACAG-------CRVDAIGVHIYT 222
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: UPI001CCFE65D (glycoside hydrolase family protein n=1 Tax=Nannocystis pusilla TaxID=889268 RepID=UPI001CCFE65D) HSP 1 Score: 152 bits (384), Expect = 2.940e-42 Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSY 498
P S KRGVA+G+ + DL L +SWWY+W+ +G+ ++ G +VPM+WG L E+++++ G + YLL FNEPN+G QANLTPQEAA LWPQV AD G+E+VSPA+N+C G+C + +P W DEFF AC G C + H+A+H Y
Sbjct: 75 PPASSCKRGVAYGYHSAADLSALAPAVSWWYNWTVPP-DEGVRDSYQEIGVEFVPMLWGAASL--EQMQEIP-AG--ARYLLAFNEPNFGSQANLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGSCNKTNPFEWFDEFFAACQG-------CRVDHLAVHWY 227
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: A0A4U1JJB9_9DELT (Glyco_hydro_cc domain-containing protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JJB9_9DELT) HSP 1 Score: 150 bits (379), Expect = 9.870e-42 Identity = 76/162 (46.91%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 19 KRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAW-VGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
KRGVA+G+ D+ L +SWWY+W+ + T G YVPM+WG G L R ++A + D +LLGFNEPN+GEQAN++ EAA LWP V AD G+ LVSPAVNFC G+C E DP +LD+FF AC G C + I IH YT
Sbjct: 46 KRGVAYGYHSKADMAALSPAVSWWYNWAHVPDEGVKPDVYKTLGVEYVPMVWGGGGLDSNRAAEIAAEIPDGVNFLLGFNEPNFGEQANMSAAEAAALWPHVEAVADARGLALVSPAVNFCGGSCQETDPFKYLDDFFAACEG-------CRVDSIGIHIYT 200
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: A0A1I2ARD7_9DELT (Glycosyl hydrolase catalytic core n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2ARD7_9DELT) HSP 1 Score: 150 bits (380), Expect = 1.160e-41 Identity = 75/163 (46.01%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 13 SSKRGVAFGFKESDDLYTLKKGISWWYDWS-PGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSY 498
S KRG+A+G+ DL L G+SWWY+W+ P G +A + +VPM+WG G L ++ + + + YLL FNEPN+G QA+LTPQEAA LWPQV AD G+E+VSPA+N+C G+C + DP W DEFF AC G C + H+A+H Y
Sbjct: 80 SCKRGIAYGYHSHADLAALAPGVSWWYNWAVPPDPDVGDYQALNVE---FVPMLWGGGSLDQD-----PPIPEGARYLLAFNEPNFGAQADLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGDCNKTDPFEWFDEFFAACPG-------CRVDHLAVHWY 227
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: A0A017T4U7_9DELT (Putative secreted protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017T4U7_9DELT) HSP 1 Score: 150 bits (378), Expect = 3.580e-41 Identity = 78/168 (46.43%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLA-WVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
PT C KRGVA+G+ + D+ L G+SWWY+W+ +A T G YVPM+WG L R +A + D +LLGFNEPN+G QANL+ EAA LWP V AD G+ LVSPAVN+C G C E DP T+LD+FF AC G C + ++ +H YT
Sbjct: 82 PTGC--KRGVAYGYHSTADMQALSPGVSWWYNWTHVPDEGVRPDAYETLGVDYVPMVWGGDGLDGARAAQIADEIPDGVRFLLGFNEPNFGAQANLSAAEAAALWPHVEAIADARGLALVSPAVNYCGGACQETDPFTYLDDFFAACEG-------CRVDYLGVHIYT 240
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: UPI001478295C (glycoside hydrolase family protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=UPI001478295C) HSP 1 Score: 150 bits (378), Expect = 3.580e-41 Identity = 77/168 (45.83%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAW-VGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYT 501
PT C KRGVA+G+ D+ L +SWWY+W+ + G YVPM+WG G L + +A + D + +LLGFNEPN+GEQANL+ +AA LWP V AD G+ LVSPAVNFC G+C E DP +LD+FF AC G C + +I IH YT
Sbjct: 82 PTGC--KRGVAYGYHSKADMQALSPAVSWWYNWAHEPDEGLKPDVYKMLGVEYVPMVWGGGGLDSAQATKIAGEIPDGTSFLLGFNEPNFGEQANLSATQAAALWPHVEAIADARGLALVSPAVNFCGGSCQETDPFKYLDDFFAACEG-------CRVDYIGIHIYT 240
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Match: A0A4U1JHY0_9DELT (Glyco_hydro_cc domain-containing protein n=2 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JHY0_9DELT) HSP 1 Score: 147 bits (370), Expect = 2.530e-40 Identity = 77/166 (46.39%), Postives = 94/166 (56.63%), Query Frame = 1
Query: 1 PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSY 498
P C KRGVA+G+ DL L KGI WWY+W+ + +A G YVPM WGE L A V + +LLGFNEPN+G QANLTP +AA LWPQ+ A+ + +VSPAVNFC G C DP WLD+FF AC G C + IA+H Y
Sbjct: 58 PAAC--KRGVAYGYHSVADLTALSKGIGWWYNWATKPDNTDVADAHAGLGVEYVPMAWGEASLVGLS----AEVPADARHLLGFNEPNFGSQANLTPTQAAALWPQIEDFAEQHDLVIVSPAVNFCGGTCNVADPFEWLDQFFAACQG-------CTVDAIAMHWY 210 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1152.998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1152.998.1 >prot_E-siliculosus-1a_F_contig1152.998.1 ID=prot_E-siliculosus-1a_F_contig1152.998.1|Name=mRNA_E-siliculosus-1a_F_contig1152.998.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=167bp PTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGback to top mRNA from alignment at E-siliculosus-1a_F_contig1152:27506..29362+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1152.998.1 ID=mRNA_E-siliculosus-1a_F_contig1152.998.1|Name=mRNA_E-siliculosus-1a_F_contig1152.998.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1857bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1152:27506..29362+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1152:27506..29362+ >mRNA_E-siliculosus-1a_F_contig1152.998.1 ID=mRNA_E-siliculosus-1a_F_contig1152.998.1|Name=mRNA_E-siliculosus-1a_F_contig1152.998.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1152:27506..29362+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |