mRNA_E-siliculosus-1a_F_contig1151.993.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: D7FPR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR7_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.380e-37 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1
Query: 1 QAGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
QAGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG
Sbjct: 112 QAGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 177
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A836CFW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.920e-17 Identity = 36/60 (60.00%), Postives = 51/60 (85.00%), Query Frame = 1
Query: 19 DDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
D+ LTPAQ+R+++++ ++ K+I+ +V+ THR+RIE FN+ LASMTEHNDIPR SAAGNG
Sbjct: 71 DEFLTPAQKRYKQQKASQDEKRIKAIVKMTHRDRIEEFNSTLASMTEHNDIPRISAAGNG 130
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A835YYZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 7.750e-17 Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 13 EVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
+VD LTPAQ+RF++ QL RE + +R +V++THR+R+E FN +A +TEHNDIPR SAAGNG
Sbjct: 69 DVDSGLTPAQKRFKEAQLARERQVMRELVKKTHRQRVEEFNQKIAKLTEHNDIPRISAAGNG 130
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A7R9VT13_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VT13_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.070e-14 Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 4 AGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
AG DDM T A+RR K +LERE K + + Q+HRER+ENF+ L S+TEHNDIPR SAAGNG
Sbjct: 55 AGSSDDDM-TEAERRAMKVKLERERKDLEKIARQSHRERVENFSEKLGSLTEHNDIPRVSAAGNG 118
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A0P1A8L4_PLAHL (Conserved alpha-helical protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8L4_PLAHL) HSP 1 Score: 69.7 bits (169), Expect = 7.480e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 4 AGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
AG EVDDM TPAQRR + + +RE ++I M +T+RERIE N L S+TEH+D+PR SAAGNG
Sbjct: 49 AGVEVDDM-TPAQRRHAEHKKKREQEEIEKMASKTYRERIEELNQHLGSLTEHHDVPRVSAAGNG 112
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A7S2WV15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV15_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.360e-13 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 10 EEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
E+ + +LT A++R RKK ERE + R + +THR+++E FN L+S++EHNDIPR SAAGNG
Sbjct: 69 EDPEALLTEAEKRHRKKMRERETEMARSLTAKTHRQKVEEFNDRLSSLSEHNDIPRVSAAGNG 131
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A482S2J5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2J5_9ARCH) HSP 1 Score: 68.2 bits (165), Expect = 3.400e-13 Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 19 DDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
D LT AQRRF+++Q E+E KKI+ ++ R+R+E FN L+ +TEHNDIPR SAAGNG
Sbjct: 58 DAHLTEAQRRFKRRQQEKEEKKIKVEASKSFRDRVEEFNYKLSKLTEHNDIPRVSAAGNG 117
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: W7TTM0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTM0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.660e-13 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 13 EVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
E DD LT QRR K ERE + I+ +V ++HRERI+ FN L+ +TEHNDIPR SAAGNG
Sbjct: 59 EKDDGLTETQRRHIAKLKERERQNIKKLVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 120
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A2R5GLX7_9STRA (Protein FAM32A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLX7_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 5.930e-13 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 28 LTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
LTPAQRRF KQ ERE ++I+ M THRER++ FN L+ ++EH+DIP+ SAAGNG
Sbjct: 307 LTPAQRRFELKQREREAERIKEMTRMTHRERVDAFNEKLSKLSEHHDIPKVSAAGNG 363
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Match: A0A7S4JUH8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JUH8_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.470e-12 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 13 EVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 198
++DD +T A+RR K +LERE K + + +Q+HRER+E+F+ L ++TE NDIPR SAAGNG
Sbjct: 59 DIDDDMTDAERRAAKFKLERERKDLEKVAKQSHRERVEDFSEKLGNLTELNDIPRVSAAGNG 120 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1151.993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1151.993.1 >prot_E-siliculosus-1a_F_contig1151.993.1 ID=prot_E-siliculosus-1a_F_contig1151.993.1|Name=mRNA_E-siliculosus-1a_F_contig1151.993.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=59bp MLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPback to top mRNA from alignment at E-siliculosus-1a_F_contig1151:35720..36258- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1151.993.1 ID=mRNA_E-siliculosus-1a_F_contig1151.993.1|Name=mRNA_E-siliculosus-1a_F_contig1151.993.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=539bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1151:35720..36258- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1151:35720..36258- >mRNA_E-siliculosus-1a_F_contig1151.993.1 ID=mRNA_E-siliculosus-1a_F_contig1151.993.1|Name=mRNA_E-siliculosus-1a_F_contig1151.993.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=354bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1151:35720..36258- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |