mRNA_E-siliculosus-1a_F_contig1150.988.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: D7FP67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP67_ECTSI) HSP 1 Score: 701 bits (1809), Expect = 1.050e-249 Identity = 353/365 (96.71%), Postives = 358/365 (98.08%), Query Frame = 1
Query: 1 DRAEVLAERLRSLKASSATLIVVPPPMLPHWRNQLSLHAEDGRLGPVFFDERSDTRLPPMDELKEFGVVVTTYQRLTNEQPGWSDSPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDVDDFQVRTND 1095
DRAE L ERL +LKASSATLIVVPPPMLPHWRNQL+LHAE GRLG VFFDERSDTRLPP+DELK+FGVVVTTYQRLTNEQPGWSDSPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETL MLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYD+DDFQVRT D
Sbjct: 306 DRAESLLERLCALKASSATLIVVPPPMLPHWRNQLTLHAEHGRLGSVFFDERSDTRLPPVDELKDFGVVVTTYQRLTNEQPGWSDSPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLHMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDIDDFQVRTID 670
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A6H5JNK1_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK1_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 1.250e-131 Identity = 214/234 (91.45%), Postives = 214/234 (91.45%), Query Frame = 1
Query: 379 MTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDVDDFQ 1080
MTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQ I XXXXXNNTCRVCGSRYDVDDFQ
Sbjct: 1 MTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQ-----------------IXXXXXXXXNNTCRVCGSRYDVDDFQ 217
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A7S2KSK3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KSK3_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.230e-83 Identity = 162/413 (39.23%), Postives = 220/413 (53.27%), Query Frame = 1
Query: 19 AERLRSLKASSATLIVVPPPMLPHWRNQLSLHA-------------------------------EDGRLGPVFFDERSDTRLPPMDELKEFGVVVTTYQRLTNE-------------QPG---WSD------SPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPE------WRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDVDDFQ 1080
AE L ASS+TL+VVP P+L HW Q+ H + GP F + LPP L F +V+T Y R T E + G W D SPL ++HWLR+++DEGH MG + + I A+RRW MTGTPT ++ LRNL L N ++ +S E W + + + RL+ LLS +M+RHTK DL+ +PPP+ + +N+SQ E Y+T+VS VR+N++ TSMEGKTSGWQDSLLNP N+KYA EAL N+R+SCCG ++P + IH ETL+MLRD+H + + ++NFI R T GE+S CQ CG LQ L + PC HL+C + +C VC + +D DDFQ
Sbjct: 493 AELHDPLVASSSTLLVVPNPLLNHWEEQIIRHINFQYSAKRSIYYHTKKRNFELSNPAVSFDLEQTLNQGPFVFIDDGTKALPPASTLSRFSIVLTAYNRFTAEWKQGSLENELRATRKGVTYWGDDLSEEASPLLKVHWLRLIVDEGHTMGKNPNNTI-QFCSWITAQRRWGMTGTPTNQIASQTGLRNLFFLQNFVKHNFFSRELGKEKLWNSLINNGWKDDHLASFYRLKHLLSFLMVRHTKDDLVELPPPIYLTTSINLSQSEKKTYNTLVSSVRTNIITTSMEGKTSGWQDSLLNPRNSKYANEALINLRISCCGSYQILPSITNIHWSETLEMLRDIHKVNDTSINLVNNFIYRCTNGELSGCQQCGIQLQTLFVIPCGHLVCPECIDSETTSCPVCETPFDADDFQ 904
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: B8CDY7_THAPS (Bromo domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDY7_THAPS) HSP 1 Score: 271 bits (694), Expect = 3.580e-78 Identity = 147/373 (39.41%), Postives = 208/373 (55.76%), Query Frame = 1
Query: 94 RNQLSLHAEDGRL--GPVFFDERSDTRLPPMDELKEFGVVVTTYQRLTNE-----------------------------QPGWSD-------SPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPE------WRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDVDDFQ 1080
R+++S E L P F + LPP D L F +V+T+Y RLT E + W + SPL ++HWLR+++DEGH MG + A + A+RRWVMTGTPT S+ LR L +L N L+ + ++ E W + + K RL LLS +MIRHTKADL+ IPPP+ ++ +++SQ ET Y+T+ + +R+NL+ TSMEG+TSGWQDSLLNP +++A EALTN+R++CCGG ++P + +H ETL +LR H +R +++FI RA G +SSC GCG +QLL + PC L+C + CRVCG +DVDDFQ
Sbjct: 790 RDKISFDLEPFLLQENPFMFIDDGSKALPPSDVLSRFRIVLTSYNRLTAEYYLTSFQQWKWKLGSVEQEVKASKKGSVGERYWGEEGFVPKASPLLKVHWLRLIVDEGHVMGKDVSNAI-QFASWVSADRRWVMTGTPTQQISSQNGLRQLFHLSNFLKHEFFARELGQEKTWTHLISRGWKDEKVASFFRLSHLLSFLMIRHTKADLVEIPPPIFSTSYISLSQSETTTYNTLAAVIRTNLITTSMEGRTSGWQDSLLNPRQSRFASEALTNLRVACCGGCQILPSISNVHWNETLTLLRQRHKVDDTKVRVVNDFIDRAQSGMLSSCMGCGIGIQLLFVVPCGDLLCAECISRETTLCRVCGETFDVDDFQ 1161
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: K0TAG8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAG8_THAOC) HSP 1 Score: 230 bits (586), Expect = 9.500e-64 Identity = 139/346 (40.17%), Postives = 196/346 (56.65%), Query Frame = 1
Query: 139 VFFDERSDTRLPPMDELKEFGVVVTTYQRLT-------------NEQPG----WSD-----SPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSAD---AALRNLSNLLNLLREKEYSP------EWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSI-PPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDVDDFQ 1080
+ FD+ + +LP + L F +VVTTYQR T ++ G W D S L ++ WLR+++DEGH MG A C A I+A+RRW MTGTPT + A L++L NL N + +S +W + + NK RL+ LLS +MIRHTK DL I PPP E +L+ +S QE AY+TIV VR+N++ TSMEG+TSG QDSLL+ N KYA +ALTN+R+S CGG ++P + ++ ETL MLR+ H + + + ++FI RA+ G++S C+ C LQ L + PC L+C + C VC +DVD+FQ
Sbjct: 710 IMFDDGTK-QLPEPEVLSRFLLVVTTYQRFTLGFKYGSIEQEKRSQITGRGYFWGDEMPMPSSLQKVTWLRIIVDEGHVMGKHANNMC-QFAAWIKADRRWAMTGTPTQQVARQHGTAVLKSLFNLTNFVNHDFFSKRLGREQDWNALISQGWRENKLVSFYRLKHLLSFLMIRHTKGDLEDIIPPPTTEKSLVKLSLQERTAYNTIVCMVRTNIITTSMEGETSGRQDSLLHANNAKYAGQALTNLRISSCGGIRILPTITNVNWDETLSMLRERHGLNENRIAKANDFIHRASSGDLSVCRACAVRLQTLFLMPCGCLVCPECISSSARQCPVCCKPFDVDEFQ 1053
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A024U6U4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6U4_9STRA) HSP 1 Score: 223 bits (569), Expect = 8.700e-62 Identity = 136/398 (34.17%), Postives = 212/398 (53.27%), Query Frame = 1
Query: 37 LKASSATLIVVPPPMLPHWRNQLSLHAEDGRLGPVFFDERSDTRLPPMDELKEFGVVVTTYQRL----------------------TNEQPGWSD-------SPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYS----PEWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSG--WQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRR---IDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXX------------NNTCRVCGSRYDVDDFQ 1080
L+ S A+LI+VP ++ HW QL +H R V FD R + +P +D L+++ VVVT++ RL + Q ++D SPLS++HW+R+++DEGH +G +A+T+ + + A++RW+MTGTPTP + LR+L LL L+E Y W + + PF A +G RL RLL+ +M+RH KAD+ SIPPP+ + ++N + E Y+ +V VR NL++T + +T G +DSLLNP N K A+ A++N+RL+ CGGGT+ ++ H VET++ D +D R + ++ A G + C+ C LQ + +T C HL+C D TC VC + +D + FQ
Sbjct: 345 LRPSHASLIIVPDTLMAHWSYQLKMHTTGLR---VLFDSRKN--VPDVDVLEQYDVVVTSFGRLATHWMHHRPLSALERRAPERLGSENQRNYADGVEHKSLSPLSQLHWVRIIVDEGHKLGGTAITNAMQMLCSLSADKRWIMTGTPTPHVAQTDGLRHLHGLLRFLQEMPYGCNDGKPWLQAIAKPFEAKCVKGYLRLERLLNRIMLRHVKADVASIPPPIFITTVVNPTPVEFRIYNGVVGVVRGNLIVTKWDPETPGPLHKDSLLNPDNRKDAILAVSNLRLASCGGGTMEVLLSQKHYVETINFF----DEFQMDWDRRLIVQQYMRNAQDGNCTPCEVCRRELQFVMVTVCGHLVCADCIEKHVDTHGFVPGPVLRTTCPVCKATFDWEHFQ 733
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A835Z414_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z414_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.100e-61 Identity = 153/482 (31.74%), Postives = 214/482 (44.40%), Query Frame = 1
Query: 19 AERLRSLKASSATLIVVPPPMLP------------------------------------------------------------HWRNQLSLHAEDGRLGPVFFDERSDTRLPPMDELKEFGVVVTTYQRLTNEQPGWSDSPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIE-----------------AERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSP--EWRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLS----IPPPVRESA-------------------------------------------LLNMSQQETLAYDTIVSFVRSNLLLTS-MEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNTCRVCGSRYDVDDFQV 1083
A RL +L S ATLIVVPPPM+P HW Q++ ++ LG FFD+ LP ++ F +VVTT RL+ E+ SPL H+ RMV+DEGHA+G + T+ G+VAR IE AER W+++GTPTP T+ + AL + +LL LR ++S +WR ++ F + G RL R+L+ +M+RH K DL PP + +L +S E++AYD I +FV++N+LLTS ++ +TS W DSLLNP A EA+TN+RL+CCGGG L + ETL ML H AS D+ R ++ R +V+ C GCG LQ+L +TPC HL+C C C D D+ Q+
Sbjct: 527 AARLAALTPSPATLIVVPPPMVPXXXXXXXXXXXXXXXXXXMRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEHWITQITTYSIPTYLGAAFFDKHIRQPLPSAQQMANFNIVVTTTSRLSAERENGDASPLFATHFQRMVIDEGHALGGQSWTNYGEVARAIESPTLSXXXXXXXXXXXXAERLWIVSGTPTPDTTLERALSHTRSLLAFLRATQWSDAADWREHIARQFGDARSVGFRRLARILAALMMRHEKRDLRGGAALFEPPRKXXXXXXXXXXXXXXXXXXLVILLTYGKKXXXXXXXXXXXXXXXXXXMLELSPAESMAYDCIAAFVKTNILLTSELQSRTSAWDDSLLNPKQRHSANEAVTNVRLACCGGGELHAFATSKNVKETLAMLELKHRASPPDVARAAEYLRRTNAQQVTGCDGCGRLLQILVLTPCVHLLCFACVRGSMYECCRCNKGIDPDELQL 1008
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A662XAN3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XAN3_9STRA) HSP 1 Score: 221 bits (564), Expect = 8.650e-61 Identity = 139/393 (35.37%), Postives = 210/393 (53.44%), Query Frame = 1
Query: 25 RLRSLKASSATLIVVPPPMLPHWRNQLSLHAEDGRLGPVFFDERSDTRLPPMDELKEFGVVVTTYQRLTNE----QPG------------------WSD-------SPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYS-PE---WRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSI-PPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSG--WQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATM-GEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNN----TCRVCGSRYDVDDFQ 1080
RL L +S A+LIVVP P++ HW+ Q+ H E G L VF D D LP +L E+ VV+T++ RL E +P ++D S L +HW+R+++DEGH +G T+ ++AR + A+RRWVMTGTPTP T A L+ + LL LR + Y P+ W + + PF N+ RL+ LLS +M+RHTK + I P P+R + ++ + E Y+ + + VR+NL++T+M+ + G +DSLLNP N K A+ + N+R++ CGG ++ +VET+DML + D + + ++ R T+ G + C C LQLL + PC HL C D +C +CG YD +DFQ
Sbjct: 384 RLEDLVSSGASLIVVPDPLVEHWKYQVETHVEPGALR-VFVDPGMDYTLPCNLDLAEYDVVITSFSRLAREWRVHRPASAMEERMAARCGSDGSRYYADGTVRGEVSSLLTVHWVRVIVDEGHKLGGKTPTNLMEMARLLCAKRRWVMTGTPTPNTLQSADLQFMHGLLVFLRNQPYGMPDGRAWAKAIAQPFGQNQVISFYRLQYLLSRIMLRHTKESIQDILPEPIRHTVFIDPTPSEYAQYNVVAASVRANLVITNMDPEKPGRLHEDSLLNPMNRKQALAVVRNLRIASCGGVNSEVLLTEKARVETIDMLTEF-DVEEAKVTTVVAYLRRVTLPGMTTECGSCKRQLQLLMVIPCGHLCCADCVEDRMTKVGPSCFLCGEVYDPEDFQ 774
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A2R5G6C0_9STRA (DNA repair protein RAD5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6C0_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.150e-60 Identity = 134/378 (35.45%), Postives = 196/378 (51.85%), Query Frame = 1
Query: 34 SLKASSATLIVVPPPMLPHWRNQLSLHAEDGRL----------------GPVFFDERSDTRLPPMDELKEFGVVVTTYQRLTNEQP--GWSDSPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPEWRRNVRGPFIANKPEGR-----ERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQ--GCGEPLQLLHITPCTHLICVDXXXXX-----NNTCRVCGSRYDVDDF 1077
SL SS TL+VVP +L HWR Q++LH + L FFD+ + LPP + L + V TT RLT E+ W S L R+ WLR+V+DEGHA+G+ T G R++A+RRWVMTGTP TS LR + L L+ Y N IA E R +L +LS++M+RHTK D+ +PP V S + ++ +E +Y+ IV+F RSN+ LTS + + SLLNPAN + A + + N+RLSC GGG++ + +ET +L + H AS +R + F R + G++++CQ GC +++ +TPC H +CV+ C C + V+ F
Sbjct: 620 SLVPSSTTLVVVPKTLLQHWRAQVALHVDPAFLVRDSCARTTGIKVDANSLFFFDDDTSRELPPPEVLARYVAVFTTVPRLTREEKDEAWKSS-LCRVLWLRIVVDEGHALGSCMQTMYGSFLGRVKAQRRWVMTGTPAKETSLGDGLRTILGTLRFLKVSPYGRAGGANEWSSLIARAMERRMGVGVAQLVAVLSDIMMRHTKVDVAELPPLVLRSVAVELTNEERESYNAIVAFGRSNIALTS--AGRAAYDISLLNPANQRMARQLVENLRLSCSGGGSMGATLTRKSWMETRTLLEERHGASPAQIREANEFTIRVSRGQMTACQAPGCSHVYRIVLMTPCVHYMCVECFERECVKPDRYACLHCSQTFSVNQF 994
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Match: A0A6G0XRX9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRX9_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.560e-59 Identity = 141/401 (35.16%), Postives = 207/401 (51.62%), Query Frame = 1
Query: 13 VLAERLRSLKASSATLIVVPPPMLPHWRNQLSLHAEDGRLGPVFFDERSDTRLPPMDELKEFGVVVTTYQRLT----------------------NEQPGWSD-------SPLSRIHWLRMVLDEGHAMGTSAMTSCGDVARRIEAERRWVMTGTPTPTTSADAALRNLSNLLNLLREKEYSPE----WRRNVRGPFIANKPEGRERLRRLLSEVMIRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSG--WQDSLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLDMLRDLHDASAVDLRRIDNFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDXXXXXNNT----------CRVCGSRYDVDDFQ 1080
V A+RLR AS A+LIVVP ++ HW NQ LH V FD + +P D L F VVVTT+ RL Q ++D SP +HW+R+++DEGH +G S +T+ + I AE+RW+MTGTPTP + LR+L +LL L+EK Y + W + + PF A +G RL RLL+ +M+RH KAD+ +IP P +++ + E Y+ +V VR NL++T + + G +DSLLNPAN K AM A+ N+RL+ CGGG++ ++ H VET++ + D D + ++ A + ++C+ C LQ L +T C HLIC + C+VCG+ YD + FQ
Sbjct: 339 VSADRLR---ASRASLIVVPDTLMAHWTNQFQLHTTGLN---VLFD--TSRTVPDADTLVLFDVVVTTFGRLAAHWIHRRPLSTLEARAPERLGRENQVTYADGVEYKALSPFLELHWVRIIVDEGHKLGGSLVTNAMQMLCGISAEKRWIMTGTPTPHVAQTDGLRHLHSLLRFLQEKPYGTDDDKPWLQAIARPFEAKCLKGYLRLERLLNRIMLRHVKADVTTIPKPTYLRTVVDPTPVEYRIYNGVVGVVRGNLVVTRWDPEFPGPLHKDSLLNPANRKDAMTAVANLRLAACGGGSMEVLLSTAHFVETVNYMNDF-DMPWERRPIVQQYMRDAQENKCTACEVCRRELQFLMVTVCGHLICANCLEAYVEVHGFKVGMLVPCQVCGAMYDWEKFQ 730 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1150.988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1150.988.1 >prot_E-siliculosus-1a_F_contig1150.988.1 ID=prot_E-siliculosus-1a_F_contig1150.988.1|Name=mRNA_E-siliculosus-1a_F_contig1150.988.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=367bp DRAEVLAERLRSLKASSATLIVVPPPMLPHWRNQLSLHAEDGRLGPVFFDback to top mRNA from alignment at E-siliculosus-1a_F_contig1150:30105..36331- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1150.988.1 ID=mRNA_E-siliculosus-1a_F_contig1150.988.1|Name=mRNA_E-siliculosus-1a_F_contig1150.988.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6227bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1150:30105..36331- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1150:30105..36331- >mRNA_E-siliculosus-1a_F_contig1150.988.1 ID=mRNA_E-siliculosus-1a_F_contig1150.988.1|Name=mRNA_E-siliculosus-1a_F_contig1150.988.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2202bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1150:30105..36331- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |