mRNA_E-siliculosus-1a_F_contig1150.986.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: D7FP69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI) HSP 1 Score: 904 bits (2337), Expect = 0.000e+0 Identity = 539/558 (96.59%), Postives = 541/558 (96.95%), Query Frame = 3
Query: 36 MAWSCPSELLKGLTLSEKKSLAGLVAVSLPADDLADGLWSLTLLEDILQLLGLDKDLAEGFYPITERSRRGLPRPADSKAAWEERVEPFRVCLPPLGEPRSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPPTREALARAEGRRVEGVSQEDLARDAAAIEQLMEAVLMKEKQETEKAKARAVEEAKLAKEEPARGAGTTLSSTNPGDNRRPSPTARNASERKPAAKTXXXXXXXXXXXXXXXXXXXSSTAAGRGPSPEAPSPSDGNTFTVPGAAGTVAPXXXXXXXXXXLTTAAGVPTHPTAEPRDSGGDSGLDTGSGGGDGLLRDWDRGPDGQVEALRGGVGSMSLA 1709
MAWSCPSELLKGL+LSEKKSLAGLVAVSLPADDLADGLWSLTLLEDILQLLGLDKDLAEGFYPITERSRRGLPRPADSKAAWEERVEPFRVCLPPLGEPRSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPPTREALARAEGRRVEGVSQEDLARDAAAIEQLMEAVL KEKQETEKAKARAVEEAKLAKEEPAR AGTTLSSTNPGDNRRPSPTARNAS RKPA XXXXXXXXXXXXXXXXXXXSST AGRGPSPE PSPSDGN FTVPGAAGTV XXXXXXXXX AGVP HPTAEPRDSGG+SGLDTGSGGGDGLLRDWDRGPDGQVEALRGGVGSMSLA
Sbjct: 1 MAWSCPSELLKGLSLSEKKSLAGLVAVSLPADDLADGLWSLTLLEDILQLLGLDKDLAEGFYPITERSRRGLPRPADSKAAWEERVEPFRVCLPPLGEPRSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPPTREALARAEGRRVEGVSQEDLARDAAAIEQLMEAVLTKEKQETEKAKARAVEEAKLAKEEPARNAGTTLSSTNPGDNRRPSPTARNASGRKPAXXXXXXXXXXXXXXXXXXXXXXSSTPAGRGPSPEVPSPSDGNPFTVPGAAGTVX--XXXXXXXXXXXXXAGVPPHPTAEPRDSGGNSGLDTGSGGGDGLLRDWDRGPDGQVEALRGGVGSMSLA 556
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: W7TZH7_9STRA (Uncharacterized protein n=5 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZH7_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.920e-32 Identity = 121/382 (31.68%), Postives = 179/382 (46.86%), Query Frame = 3
Query: 72 LTLSEKKSLAGLVAVSLPADDLADGLWSLTLLEDILQLLGLDKDLAEGFYPITERSRRGL------------PRPADSKAAWEERVEPFRVCL--------------PPLGEP-------------------RSAVLRDLMVIVALRCGYDARTR-VTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEF--------ESETSVGEEMCVSICVPG-VLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRD 1052
L+ E+ L GL+A+S+P+ D A G ++L LL + +LGL ++ YP+ + P A++E+V+ + PP + R +LRDLM+ +A R YDARTR + R DA ++ W ++ VE+ A +YE +E+E R KI AA +GGG LLA+TGGLA +G +TA +ATLFGA GAGLVGYKM RRT + +FEF + E+ +G M + IC+ G +++D+++ +GVEPR SDV+A RLR FY HN + + + G+ES+L +Y A P D
Sbjct: 6 LSTEERVCLLGLLALSMPSQDQAFGRYNLRLLRTVSNMLGLQENHCSALYPLLHSEGNDVKIRHTQLLAFLKPFEGAESLAFDEKVQFAQASCKNHTYTEELGLKQEPPADQAYHISGKRFSGSAVYHERRRRYLILRDLMISLACRSLYDARTRRIMMRLASDAFEISWR-NIACVEAFTASYLYEIWEARQEKEKINKGLRYAKITAAAVGGGALLALTGGLAAPAIGIGLSAMSATGAVV-----AGLTSTASVATLFGASGAGLVGYKMRRRTAALDQFEFRHVEPSGDKKESDLGR-MAICICISGWLVEDESEYDTPFGVEPRNSDVAA--RLRLFYSRHNPQNIKYATLLADEFQGRESELEHECLRKYNASPFD 378
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: A0A1V9YBI8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBI8_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.000e-25 Identity = 112/356 (31.46%), Postives = 161/356 (45.22%), Query Frame = 3
Query: 54 SELLKGLTLSEKKSLAGLVAVSLPA--DDLADGLWSLTLLEDIL-QLLGLDKDLAEGFYPIT----ERSRRGLPRPADSKAAWEERVEPFRVCLPPLGEPRSAVLRDLMVIV--------ALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDR----W-RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLK-DKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPP 1058
+ ++ L+ + K+ L G+VA +L D W+ T ++ Q L L EG PI RS L P D+ + R P P + + + RD +V+V GYDAR R FR + + ++ E+ L ++ + R++ + R W R KIG A + GGTLLA+TGGL XX S TA + LFG GAGLVG+K DRRT G+K+FEFE S G M V ICV G L D+AD +R WG + +E L FY N K+ ++ +L + G+E +L +L +YG P + P
Sbjct: 26 ARVMMKLSTTAKRGLGGVVACALAQVNDGSVHREWAQTYFRFLMEQCLDLPPTTVEGLVPIVVMERARSSGNLAAPEDASSPRTLRETPMN-SRPFVALVEADITRDELVVVLHFMLWKTTTTVGYDARARAMFRFLVQEIHALPWAVIASEEAALGMALFLEATELKSRKVASPRRWGDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAVVGTXXGSAGGITA-ASVLFGTAGAGLVGFKTDRRTSGIKQFEFEL-LSAGSGMHVYICVSGWLDHDEADFKRPWG--------TPREYLLAFYQQFNPDKIPSIDAMLQRFRGREDELFASLRRQYGLAPDEDP 370
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: T0QKH0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QKH0_SAPDV) HSP 1 Score: 115 bits (288), Expect = 2.050e-23 Identity = 121/369 (32.79%), Postives = 169/369 (45.80%), Query Frame = 3
Query: 54 SELLKGLTLSEKKSLAGLVAVSLPA--DDLADGLWSLTLLEDIL-QLLGLDKDLAEGFYPIT--ERSRRGLPRPA---DSKAAWEERVE----PFRVCLPPLGEPRSAVL------RDLMVIV--------ALRCGYDARTRVTFR-RVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDR----W-RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKD--KADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPP 1058
+ ++ L+ + K+ L G+VA +L D A W+ T ++ Q L L + EG PI ER+R R A D A E+ V P + P+ L RD ++ V GYDAR R FR V + ++ W SE ES L ++ + R++ + R W R KIG A + GGTLLA+TGGL XXX S TA LFG GAGL GYK DRRT G+K+FEFE T+ G M V IC+ G L++ +AD +R WG + +E L FY N K+ ++ +LV + G+E L +L +YG P + P
Sbjct: 33 ARVMMKLSTNAKRGLGGVVACALAQVNDGSAHREWAQTYFRFLMEQCLDLPFHMIEGLLPIVAMERARSSRDRAAMLVDDTA--EDHVSLTLSPRTLRETPMNSRPFVALVEADISRDELIAVFHYMLWKTTYTVGYDARARSMFRFLVHEIHELPWTVIASE-ESALGMALFLEANELKSRKVESPRRWGDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAVVGXXXASAGGVTA-ATVLFGTAGAGLAGYKTDRRTSGIKQFEFELLTA-GSGMNVYICISGWLENNSEADFKRPWG--------TPREYLHAFYKQFNPEKIASIDAMLVRFRGREDDLFASLRRQYGLAPDEDP 388
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: A0A1W0AA63_9STRA (B2-adapt-app_C domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AA63_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.630e-23 Identity = 115/354 (32.49%), Postives = 165/354 (46.61%), Query Frame = 3
Query: 54 SELLKGLTLSEKKSLAGLVAVSLPA--DDLADGLWSLT----LLEDILQLLGLDKDLAEGFYPITERSRRGLPRPADSKAAWEERV---EPFRVCLPP--LGEPRSAVLRDLMVIVALRCGYDARTRVTFRRVC-DAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDR----W-RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKA--DLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPP 1058
+ +L L+ + + LAGL+A +L D W+ + LLED LQ+ + EG PI R S + E+ EPF V + E VL ++ GYDARTR FR + +A ++ W +++ ES + ++ V + R++ + R W R KIG A + GGTLLA+TGGL XXXXX LFG GAGL GYK DRRT G+K+FEFE T+ G M V IC+ G L+D D +R WG + +E L FY N K+ ++ +L + G+E +L +L +YG P + P
Sbjct: 43 ARVLMKLSTNGMRGLAGLIACALAQVNDGSESREWAQSYYRFLLEDCLQMT---EHKIEGLIPIVALERGRTMDSTTSPRSLEQTPMDSEPFVVLVEADISSEELITVLHFMLWKTVNAIGYDARTRAMFRFLTHEAHELPWSV-ITKEESAIGMALFLEVNELKSRKVESPRKWNDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAVVXXXXXXXXXXXX-XTVLFGTAGAGLAGYKTDRRTSGIKQFEFELLTA-GSGMSVYICISGWLEDNVQDDFKRPWG--------TPREYLLAFYKQFNPEKIDSIDSMLQRFRGREDELFASLRRQYGLAPDEDP 382
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: A0A7S2PUT1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PUT1_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.680e-22 Identity = 69/174 (39.66%), Postives = 96/174 (55.17%), Query Frame = 3
Query: 540 RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGE----EMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAK-ERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADP 1046
RG K+G A G TL A+TGGLA ++ A + T+FG GGAGL GYKM RRTKG+ EF+F+ E +G+ E+ ++C+ G L+D D QR WGV P + K E L RFY++HN V V +IL + G+ +L +AL ++YG+DP
Sbjct: 626 RGIKVGTAGAVGATLFALTGGLAAPGIAAGLAAVAGGSALAAGVTTV-LSSAAAITTIFGVGGAGLAGYKMHRRTKGLTEFDFQKE-QLGKNSEAELFSTVCISGWLRDARDFQRPWGVSPSHPRIIDKQELLERFYFIHNPDNVHRVPEILKHWKGRYFQLWRALKEKYGSDP 797
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: B5YMF2_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMF2_THAPS) HSP 1 Score: 113 bits (283), Expect = 1.720e-22 Identity = 70/173 (40.46%), Postives = 95/173 (54.91%), Query Frame = 3
Query: 540 RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESE--TSVGE-EMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAK-ERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADP 1046
RG KIG A G TL A+TGGLA + A ++T+FG GGAGL GYKM RRTKG+ EF+F+ E + GE E+ ++C+ G L+D D QR WGV P + K E L RFY++HN V ++IL + G+ +L +AL ++YG DP
Sbjct: 973 RGLKIGTAGAVGATLFALTGGLAAPGIAAGLAAVAGGSAVAAGVSTV-LTSAAAISTIFGVGGAGLAGYKMHRRTKGLTEFDFQKEGMSKNGEAELFSTVCISGWLRDARDFQRPWGVFPSHPRIVDKLELLERFYFIHNPENVQRCQEILKHWKGRYFQLWRALREKYGTDP 1144
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: A0A3R8CUC3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R8CUC3_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.290e-22 Identity = 112/376 (29.79%), Postives = 161/376 (42.82%), Query Frame = 3
Query: 72 LTLSEKKSLAGLVAVSLPA--DDLADGLWSLTLLEDILQ-LLGLDKDLAEGFYPI-TERSRRGLPRPADSKAAWEERVEP--FRVCLPPLGEP-------------------------------------RSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVY-ERVARDRERELRTDR---W-RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDK----ADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGAD 1043
L+ S+K+ +AGL A LPA D D +WS L+ I++ +GLD E + PI T R + + D + ++P F + P R V++ L+ GYDAR+R FRR+ AMQ++W V++ E T+ + ++ E A ++ + W R IGAA + GG LLAVTGGLA S TA LFG GAG++G K+D RT+GV +F F+ S G+ M V ICV G L D + +R WG ++E LR FY N KV V+ ++ Y G+E + L Y D
Sbjct: 4 LSESQKRGVAGLCACLLPAVTDGSTDLIWSKAYLQLIIEHFIGLDSTQTEAYVPILTSRLVQLAEKTHDPSTVTVDELDPSPFLALIKPERNVTKDFERWTNKLENRHNKWSNNSRTENDAVEMLTTENFRLEVIKRLLWFTVKSVGYDARSRTLFRRLVLAMQLQWTD-VTKEEITIGQVLFAEATAMPLDKVAAKPKIWDWKRNAAIGAAAMTGGALLAVTGGLAAPAIAASLTALGGAGVTIGAAVGSAXXVTA-TTVLFGTAGAGVMGMKVDTRTRGVHDFSFDL-VSAGDGMNVYICVSGWLDDDDPPTSGFRRAWG--------DSREYLRAFYRQKNIEKVDQVDQVMDRYKGREDEFFAILRRTYNID 368
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: A0A485KQD1_9STRA (Aste57867_10253 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQD1_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.210e-19 Identity = 108/361 (29.92%), Postives = 154/361 (42.66%), Query Frame = 3
Query: 54 SELLKGLTLSEKKSLAGLVA--VSLPADDLADGLWSLTLLEDILQ-LLGLDKDLAEGFYPITE--RSRRGLPRPADSKAAWEERV---EPFRVCLPPLGEPRSAVLRDLMVIVALRC----------GYDARTRVTFRRVCDAMQ-VRWHP-RVSEVESTLARKVYERVARDRERELRTDRW----RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYG-ADPRDPPT 1061
+ ++ L+ + K++L G++A ++L D +W+ T + L E F P+ + RSR + S+ E+ PF + S + RD +V + C GYDARTR R V + W EVE A + + R++ +W R IG A + GGTLLA+TGGLA + TA LFG GAGL G+K DRRT G+K FEFE T G+ M V ICV G L D Q E + + +E LR FY + K+ +E +L Y G+E L AL +YG + +DP T
Sbjct: 59 ARVMMRLSPAGKRALGGVLACSIALVNDGSESRVWAQTFYRFLADSCCELPASATEAFLPVVQVGRSRTAASTSSSSQTYLEDAPIDSAPFVAVI------ESEISRD--EVVQMLCFVLWRTTHAVGYDARTRAMLRLVTRQFHDIPWSAIAAEEVELARALLLEAHELQTRKKVASPRKWGDWRRNLAIGGAAVAGGTLLALTGGLALPVLASGFSLLGTAGAAVGGALMTSGGITA-ATVLFGTAGAGLAGFKADRRTVGIKHFEFELLTP-GDGMHVYICVAGWLDDDESGQANHNAEYSKAFGTPREYLRAFYEQYCPEKLDTIEAMLQRYKGREDDLFAALRKQYGLVEGQDPVT 409
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Match: A0A024G2C1_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G2C1_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.510e-19 Identity = 104/335 (31.04%), Postives = 154/335 (45.97%), Query Frame = 3
Query: 72 LTLSEKKSLAGLVA--VSLPADDLADGLWSLTLLEDILQ-LLGLDKDLAEGFYPITERSRRGLPRPADSKAAWE---ERVEPFRVCLPPLGEPRSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDR-----W-RGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKADLQRGWGVEP--RGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRY 1034
L+ S+K GL ++L D D WS L + + L LDK+ A+ +YP + P D KA E+++ + L + L+ + GYDAR R R + +M++ W +V E E+ + R++Y + +++ + W R IGAA + GGTLLAVTGGLA S TA + LFG GA ++G+K D+RT+GV+E F+ T+ G+ M V ICV G L DK D+Q GVE R + E LR + + HN K V+ IL Y G+E + L +
Sbjct: 13 LSKSQKIGFLGLCGCRLALVNDTSIDLEWSKRFLSILSKDFLKLDKNDAQAYYPFLDAKSE---EPIDPKAFLNLLVEKIDDNQDSLVTGNALHWKIFEQLLWFIVFNIGYDARARTMCRHLAASMEISWS-KVIEEETIIGRELYAEAMKISKKKFGGQKKGIWNWKRNMAIGAAAVTGGTLLAVTGGLAAPAISASLAVFGTTGAAIGTAIGSTAGVTA-TSILFGTTGASVIGFKTDKRTRGVQELCFDLITA-GDGMNVYICVTGWL-DKDDIQ---GVEDPFRLAWGDTIEYLRMYQHYHN-LKEDAVDTILELYRGREMEFITKLRKMH 336 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1150.986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1150.986.1 >prot_E-siliculosus-1a_F_contig1150.986.1 ID=prot_E-siliculosus-1a_F_contig1150.986.1|Name=mRNA_E-siliculosus-1a_F_contig1150.986.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=558bp MAWSCPSELLKGLTLSEKKSLAGLVAVSLPADDLADGLWSLTLLEDILQLback to top mRNA from alignment at E-siliculosus-1a_F_contig1150:10693..17787+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1150.986.1 ID=mRNA_E-siliculosus-1a_F_contig1150.986.1|Name=mRNA_E-siliculosus-1a_F_contig1150.986.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7095bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1150:10693..17787+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1150:10693..17787+ >mRNA_E-siliculosus-1a_F_contig1150.986.1 ID=mRNA_E-siliculosus-1a_F_contig1150.986.1|Name=mRNA_E-siliculosus-1a_F_contig1150.986.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3348bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1150:10693..17787+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |