mRNA_E-siliculosus-1a_F_contig115.978.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig115.978.1
Unique NamemRNA_E-siliculosus-1a_F_contig115.978.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: A0A6H5JND9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JND9_9PHAE)

HSP 1 Score: 617 bits (1591), Expect = 5.980e-222
Identity = 314/320 (98.12%), Postives = 317/320 (99.06%), Query Frame = 1
Query:   49 MFTANRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 1008
            MFTA+RLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASK ERYPFQPQGGGLGCTLDGTVTVERAAGTI+IHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLA+STFVSE GSGLVKYSLKVVPI HRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD
Sbjct:    1 MFTASRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKTERYPFQPQGGGLGCTLDGTVTVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEAGSGLVKYSLKVVPIFHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 320          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: A0A7S2UYF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.740e-33
Identity = 97/315 (30.79%), Postives = 164/315 (52.06%), Query Frame = 1
Query:   67 LRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHE--HDAVTARLHATFPFVECKDLEVVTDHPQGGVPN------SEAVSVHKRPASKAERYPFQPQGG---GLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGV-GRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTH-TYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFV 972
            ++  D   K +  + +K+  GA+VSIAS+ +MA+L+ISE+  Y KVD  SHM V+   E         LH TFP + C+DL++  ++ +GG         S + ++  R +   E   F+ +        CT++G++ + R  G+I I      P  +      L     +  + P      N++H IH+  FG  + G   + G   L  +    + GSGL +Y +K+VP ++  +H   V  H  YS    FV ++  +  LS+    LG+E SYDF+ +MV+Y + ++S+F+ +T++CAI+GG++T S L V
Sbjct:    7 MKSLDGFSKPMADIQEKTTAGAVVSIASLAIMALLLISEIWLYFKVDVVSHMGVSHLKEGMEQPFDVHLHITFPHMRCEDLDLRVENLKGGDAADVMKMLSSSKTLDMRQSKPNEVVLFKDEARFKMNETCTVEGSLKLPRVGGSIDI-ASRRKPVDIASLLSALFLNTAQLGNVP------NVSHVIHELWFGDKILGGDQMAGSLPLKDACNAVDHGSGLFRYEVKIVPTTYEWLHTHRVKEHYQYSVVENFVKDSAGISSLST----LGLEISYDFSPIMVEYVEQKQSIFQFLTNLCAIMGGVFTTSSLLV 310          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: A0A7S2AXB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB8_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.430e-30
Identity = 97/308 (31.49%), Postives = 153/308 (49.68%), Query Frame = 1
Query:   58 ANRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAV-ADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHV----MHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 966
            A+ L++FD+  KA+ GV  ++L GA++++AS TL+ +L  SELL +  V T  HM V +   +  +V   LHATFP + C    +  +  +G        S+ K P  +             GC+L G + V +  G   I      +   P   + +G  L    G   S      G NM+H IH   FGP   G      N L + T V     G  ++ +KV+P  ++ +  + V ++ YS +  FV + D++  L +SS   G+ F YDF  VMV+Y + + S+ + +T +C I+GGI+TVSGL
Sbjct:    2 ADWLKKFDVHVKALDGVRKRTLPGAILTLASSTLIVLLCFSELLVFSSVKTVHHMTVDSAAADRPSVRISLHATFPHLACDSTNLEVEATRGDPTMDVVNSIVKTPVGEG------------GCSLKGELLVGKVGGNFHISTGMAGLPSSPMLQLSSG--LMSATGLMGS----FKGVNMSHTIHHLSFGPKFPGRS----NPLEEVTNVVSTDVGQYQFHIKVIPTVYKYLRRSPVYSNQYSLSEQFV-KLDLMSALKASSAP-GIFFYYDFYPVMVEYDEEKVSILQFLTRICGIIGGIFTVSGL 285          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: A0A7S1CC96_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC96_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.900e-24
Identity = 85/308 (27.60%), Postives = 143/308 (46.43%), Query Frame = 1
Query:   67 LRRFDLGQK-AVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLG-------VEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 966
            ++ FDL  K A + ++ ++L GA+++ A   L   LV++E   +   +   H+ V D      +   L+  FP V C+DL V     +G       V++ K P   A++    P     GC + GT TV + AG I I                 A+  G  R G  A    N +H I    FG P  G V     +L   T    +     +Y ++ VP  +  + GA + +H YS+   FV + +        ++++G       V F ++F+ VMV+  +T+R++ + +TS+CAIVGG++TV+G+
Sbjct:    1 MKAFDLHVKVAHEHLVKRTLCGAVLTAAFAALSVALVVNEASLWATTEVEDHLRV-DAGVSMPLDVALNIAFPHVRCRDLRVTVSDARGLTYAELRVNLEKTPFPDADKGDQAP-----GCVVAGTATVRKVAGLINIEA------------GAAAQIPGFRRDGDTAAL--NTSHVIRKLSFGDPFPGMV----EALGGFTSPPRDKPARYQYFIQAVPTVYEPLRGARIASHQYSAT-KFVTDVEAPDANDFEAIMMGGGVQPAGVYFKFEFSPVMVRVVETKRTVLQFLTSICAIVGGVFTVAGM 283          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: A0A6G0WYB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYB9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.110e-23
Identity = 85/316 (26.90%), Postives = 145/316 (45.89%), Query Frame = 1
Query:   61 NRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 1008
            +RLR++D+  K V+G+ +K+ VGA++++ SV +  +L +SEL  Y   +  + M V    +   +   +  +F   +C D+ +     +G   N   +S      S     P   +  G GC   G+V V + AG++      H+ S  +F+     +               N +H +H   FGP +   V    N L       E+   L KYSL VVP  +  ++G+ + T+ YS     V E         +    GV F Y+F+ + V+Y +T+ S  + ITS CAI+GG++ V+ +    +  VS +K D
Sbjct:    3 SRLRQYDVYTKGVEGIQEKTAVGAVITVLSVAVALLLFLSELNMYTTTEVVNRMYVDTMPQDTIMHIEVDISFLHEKCSDVSMDASDSKG---NKGLLSD-----SNIASVPIGAE--GEGCRFTGSVDVHKIAGSVSFA---HEGSLNMFSFMDFLQF--------------NSSHIVHRLTFGPEIPNMV----NPLENVHKTVEKNVALYKYSLSVVPTQYTPLYGSPIQTYQYS-----VTEYTSEPHDGGTLSFPGVSFMYEFSPIKVEYIETKPSFLQFITSTCAILGGVFAVARILDSIIYSVSSRKLD 282          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: UPI001C7274B9 (endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X1 n=6 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7274B9)

HSP 1 Score: 104 bits (260), Expect = 5.720e-22
Identity = 88/315 (27.94%), Postives = 146/315 (46.35%), Query Frame = 1
Query:   73 RFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECK--DLEVVTD---HPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAK--STFVSEEGSGLVK------YSLKVVPISHRRMHGAEVNTHTYS----SNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 966
            RFD+ +K  + +   +L GA++S+     + +L +SE L ++ V   S + V +  ++D +   L+ T P ++C    L++  +   H  G V N+E V V   P +K             GC  +G+  + +  G    HV  H  S                 S P A+   +M H IH+  FG  V G +    N L +   +   ++GS L        Y +K+VP  +  ++G +V T+ Y+    S+V F           S  ++  + F YD T + VKYT+TR  ++  +T+VCAIVGG +TV+GL
Sbjct:   13 RFDIYRKIPKDLTQPTLTGAIISVCCXXFILILFLSEFLHFMNVSVISELFVDNPGDNDRILVHLNVTLPNLQCSVIGLDIQDEMGRHEVGFVENTEKVPVG--PDNK-------------GCRFEGSFYINKVPGNF--HVSTHSAS-----------------SQPDAI---DMRHIIHECSFGTKVAGKIKGSFNPLKEIDRSGARDDGSTLFADIESHDYVMKIVPTIYESLNGLKVETYQYTYAYKSSVTFS---------HSGRIMPAIWFRYDLTPITVKYTETRPPLYSFLTTVCAIVGGTFTVAGL 281          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: UPI0006B0895B (endoplasmic reticulum-Golgi intermediate compartment protein 1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0895B)

HSP 1 Score: 101 bits (252), Expect = 5.710e-21
Identity = 83/309 (26.86%), Postives = 135/309 (43.69%), Query Frame = 1
Query:   67 LRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDL-----EVVTDHPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVN----THTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 966
            +RRFD+ +K  + +   +L GA+VS+     + VL +SE L++I  +  S + V +   +D +  RL+ + P + C  L     + +  H  G V N+E V                P   G GC  +G+  + +  G    HV  H  S+                  P ++   +M H IH+  FG  VK       N L        +  G   Y +K+VP  +  + G +      T+ Y + VAF           S  ++  + F YD   + VKYT+ R+ ++  IT+VCAIVGG +TV+G+
Sbjct:    5 VRRFDIYRKIPKDLTQPTLTGAVVSVCCCFFILVLFLSEFLSFISTEVVSELYVDNPGTNDKILVRLNISLPRLSCDVLGLDIQDEMGRHEVGFVENTEKV----------------PLNDGKGCRFEGSFYINKVPGNF--HVSTHAASKQ-----------------PDSI---DMGHFIHEVSFGQKVKDQSRGSFNPLKDVNKEDSQDIGSHDYVMKIVPTIYEDLSGQKTESYQYTYAYKTYVAFS---------HSGRIIPAIWFRYDLNPITVKYTEKRQPLYSFITTVCAIVGGTFTVAGI 266          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: A0A7S4A3Y7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3Y7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 6.170e-21
Identity = 93/309 (30.10%), Postives = 149/309 (48.22%), Query Frame = 1
Query:   91 KAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVAD---------FHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVS-VHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHD-PSR--VIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKST----FVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 966
            +AV+GV ++++ GAL++   V L+  L+  EL +Y   ++  H+ V D         FH  D +   L ATF  V+C DLE+  +  +G     +AV  ++ R     E Y +       GCTLDG + V + +    + +     P++  VI    FL +    T +GP     +NMTHK+H F FG          R+S+ K+      VS +  G  +Y+LKV+P         +V  + YS   ++V    +  D   S+ + G+ F YDF  VMV+    R S+ E + S+CA+VGG   ++ L
Sbjct:    8 RAVEGVQERTVSGALITGGCVLLILSLLTGELSSYFYPNSIHHLGVDDGDASIGSRPFHVPDRLPIELSATFAHVKCDDLELSIEAARG---LRDAVDRINFREPHAKELYGWSDASTSEGCTLDGKLRVGKVSAHFSVGLTAAAAPAKPNVIMVQSFLRQA---TNAGPS----KNMTHKVHVFRFGS---------RSSVTKNAPLDGLVSPDLDGQARYALKVIPTVLDDGWFPQV-ANQYSLAESYVSAKQLQTD---STAVPGIVFFYDFFPVMVQVKKERTSILEFLVSLCAVVGGCVALASL 293          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: W4G1C2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1C2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.620e-20
Identity = 85/330 (25.76%), Postives = 141/330 (42.73%), Query Frame = 1
Query:   61 NRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVG--------VGRNSLAKSTFVSEEGSGLV------KYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 1008
            NRLR++D+  K V G+ +K++ GA++++ SV ++ +L +SEL  Y   +  + M V    +   +   +  TF   +C D+ +     +G        ++   P    E           GC L GTV V + AG  V+   H     +     FL                 N +H +H   FGP +   V         V +N     +++S     LV      KY L +VP  H  ++G  V T+ YS     V E         +    GV F Y+F+ + V+Y +++ S  + +TS  AIVGG++ V+ +    +  VS +K D
Sbjct:    3 NRLRQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQDAVMRIEVDITFLHEKCADVAMDASDIKGNKDLLSDSNIAAVPVVSDESE---------GCRLTGTVDVHKVAG--VVSFAHAGSLNMFSFSDFLEF---------------NSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYS-----VTEYTSEPSEEGALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKMD 301          
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Match: H3F916_PRIPA (Uncharacterized protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=H3F916_PRIPA)

HSP 1 Score: 97.1 bits (240), Expect = 2.730e-19
Identity = 76/314 (24.20%), Postives = 139/314 (44.27%), Query Frame = 1
Query:   76 FDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRP-ASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSP--KKHD 1008
            FD+ +K  + +   +  GA++SI  V  +A ++ ++LLAYI +D  S + V D      +   ++ +FP + C+ + +V      GV   +    H+     K ++ P     GG+GC  + T  + +  G    H+  H                   +S P +    +M H IH   FG  +   +    + L+K   +  +     +Y LK+VP     + G     + Y+         + +    S  ++  V F Y+   + VK T+TR+S +  +TS+CA+VGG +TV+G+    +  +S   KKH+
Sbjct:    5 FDIYRKVPKDLTQPTTTGAVISICCVIFIAFMIFNDLLAYIFIDVRSELFVDDPGREGKIDVSVNVSFPALPCELIRIV----DVGVDIQDENGRHEVGFVGKTDKIPLD---GGVGCRFESTFEINKVPGNF--HLSTHS-----------------AQSQPDSP---DMRHVIHSIMFGDKIMNNLKGSFDPLSKKETMGSQPLATHEYILKIVPTVFESIGGTVTTAYQYTFG-----HREYVAYHHSGRIIPAVWFKYELQPITVKMTETRQSFYMFLTSICAVVGGTFTVAGIIDSFVFTMSEMWKKHE 284          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig115.978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JND9_9PHAE5.980e-22298.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UYF2_9STRA2.740e-3330.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AXB8_9STRA2.430e-3031.49Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1CC96_9STRA5.900e-2427.60Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6G0WYB9_9STRA4.110e-2326.90Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI001C7274B95.720e-2227.94endoplasmic reticulum-Golgi intermediate compartme... [more]
UPI0006B0895B5.710e-2126.86endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A7S4A3Y7_9STRA6.170e-2130.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W4G1C2_9STRA2.620e-2025.76Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
H3F916_PRIPA2.730e-1924.20Uncharacterized protein n=2 Tax=Pristionchus pacif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig115contigE-siliculosus-1a_F_contig115:44410..46942 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size963
Model size1126
Exons3
Ec32 orthologEc-01_011140.1
Ec32 ortholog descriptionEndoplasmic reticulum vesicle transporter, C-terminal
Hectar predicted targeting categorysignal anchor
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.D
EggNOG OGsCOG0445@1,KOG2667@2759
EggNOG free text desc.vesicle-mediated transport
GOsGO:0008150,GO:0009825,GO:0009987,GO:0016049,GO:0040007
KEGG koko:K20365,ko:K20367
Seed eggNOG ortholog2880.D7G740
Seed ortholog evalue7.3e-175
Seed ortholog score619.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig115.978.1prot_E-siliculosus-1a_F_contig115.978.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig115 44458..46827 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927663.7939167-UTR-E-siliculosus-1a_F_contig115:44409..444571622927663.7939167-UTR-E-siliculosus-1a_F_contig115:44409..44457Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig115 44410..44457 +
1696318629.910163-UTR-E-siliculosus-1a_F_contig115:44409..444571696318629.910163-UTR-E-siliculosus-1a_F_contig115:44409..44457Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig115 44410..44457 +
1622927663.8597074-UTR-E-siliculosus-1a_F_contig115:46827..469421622927663.8597074-UTR-E-siliculosus-1a_F_contig115:46827..46942Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig115 46828..46942 +
1696318629.947835-UTR-E-siliculosus-1a_F_contig115:46827..469421696318629.947835-UTR-E-siliculosus-1a_F_contig115:46827..46942Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig115 46828..46942 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927663.8124874-CDS-E-siliculosus-1a_F_contig115:44457..445451622927663.8124874-CDS-E-siliculosus-1a_F_contig115:44457..44545Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig115 44458..44545 +
1696318629.9229116-CDS-E-siliculosus-1a_F_contig115:44457..445451696318629.9229116-CDS-E-siliculosus-1a_F_contig115:44457..44545Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig115 44458..44545 +
1622927663.8252182-CDS-E-siliculosus-1a_F_contig115:45394..455561622927663.8252182-CDS-E-siliculosus-1a_F_contig115:45394..45556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig115 45395..45556 +
1696318629.9309802-CDS-E-siliculosus-1a_F_contig115:45394..455561696318629.9309802-CDS-E-siliculosus-1a_F_contig115:45394..45556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig115 45395..45556 +
1622927663.8397248-CDS-E-siliculosus-1a_F_contig115:46114..468271622927663.8397248-CDS-E-siliculosus-1a_F_contig115:46114..46827Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig115 46115..46827 +
1696318629.9385607-CDS-E-siliculosus-1a_F_contig115:46114..468271696318629.9385607-CDS-E-siliculosus-1a_F_contig115:46114..46827Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig115 46115..46827 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig115.978.1

>prot_E-siliculosus-1a_F_contig115.978.1 ID=prot_E-siliculosus-1a_F_contig115.978.1|Name=mRNA_E-siliculosus-1a_F_contig115.978.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=321bp
MFTANRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYI
KVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSE
AVSVHKRPASKAERYPFQPQGGGLGCTLDGTVTVERAAGTIVIHVMHHDP
SRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGR
NSLAKSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFVPE
ADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGI
YTVSGLFVRGLQVVSPKKHD*
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mRNA from alignment at E-siliculosus-1a_F_contig115:44410..46942+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig115.978.1 ID=mRNA_E-siliculosus-1a_F_contig115.978.1|Name=mRNA_E-siliculosus-1a_F_contig115.978.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2533bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig115:44410..46942+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGCGCCTCTGCTAGGTACCTTGATGCAGTTACCTGCTCTTCTTGCGGAAT GTTTACAGCTAACAGGCTTCGGCGGTTCGACCTTGGTCAAAAGGCCGTCC AAGGCGTCCTCGACAAATCTCTCGTGGGTGCATTAGGTGAGTTGAGTTCC TCCGCGTTTTCTGGCTCCCGTCGTCGCGTCGTCTGCCGTCGCCAAACCAA AGATGTTCTCACCCCAACGTCTCCGCTCCCGTTCTCCCCTAATGCAATCG CTGTCCTGGCGTAGATAGCGAACATCGCCCTCGCGTACGGGTTCACGTCA TCTCCTCTTTACTCCAGGCACACCCCTTGATAGATTTTGGGTAGTACTCT CGATCTCATGCTACAGGCGACACCATGCTCTGGGGTGTTGCGATAGTTAC ACTCGGGGTGGGTTCATGTAGCCACTTTGATTGCCGGTCTATTGCGTGAG GAACCACGCCTCCTTGGACCAGTTTTCAGGCTCGATATCTCTTATTTAGA GCACCATTTGCATAGACTATGTTACAGCACGTTATGTTGGCAGCGCAATC CTTGGGTGAGAGATTCGACGATCTTTGAGAAACCTGACCTGTGAAGACCT ATTTAGGCCTGTATCAAGCGTTAGGGGCTGCTGAAACGGGCGGCATCTGC TTGTAGTCTAACAGGAAATATCCAAAACCACCAGCCGGTGGAGAGAGTCT CGATCTCAGATGCTACATGAGTAGAGGGCATCATGGATCAGCGATCTAAA TCGTCTTTTTCCCTGTTGACAAAACAGCAGTCTTCCCCTTACGCGCAATC TGGACCTTTGGCCTGTAGACTTTCTGCGTGTCACATTTTCAACGTTGAAA TAGGCGTTGGCGCGGGCTTGTCGAATCTCGAAACTGCATGCCTATCGATA TCAGCAGTCAAGTAGAAAAGTGAAAGACAGCATGATCATGTTCTCCCCCG TGTTAAACGTTCCTGCCCGGTGGTCCGTCGAACAGTTTCAATAGCTTCAG TGACGCTTATGGCGGTGCTCGTCATATCGGAGCTGCTGGCGTACATCAAG GTGGACACCTCGAGCCACATGGCGGTCGCGGACTTCCACGAGCACGACGC CGTTACCGCTCGGTTGCACGCCACGTTCCCCTTTGTAGAATGCAAAGGTC AGTGCAACTGCGGTGTGGATGGCCAGCCAGCTGTCTCAACAGCTATTGCT GCCCCCATGTGTTTCAGATGCGCAGACGCTGTATTGCTAAGCTCACCTGT AGTCACACCGGTGCATGTCGTGATGCGATTTCATACACTAAACTTGTTGT ACGAACCGCCCGCAACCTACACGTTCAATTGTTTTGCCCTGCGGTGTTGG CTGGTACGTAGCGTTTTCAGTTTGGTGCACGCCACCTGAAGGAACCCTGA TCTGTATGTGGACTGGCGGAATCTCAGCTTCGCGGAAGTAATTATGATTC TCTCGTTTTCCATCCACACCCCTCGGGTAGGCATGTTGGGAGATGCGTAT GACTTGCAATCTTCAAACACGCAAGTAGTAAGTGTCATCCCCGGTTTTTA GCGCCCGCATGTTATTCGCGTCTCCATCACGCGAACAAGTTGTGCGCGGC CTCAGGAAGGAATTGCGACGCCCGGGCCAATGCTCAACTCGCAAGTACAA ACAACGAGTTGTCTCCTCGCCCCCCCCACGTGCTGTTCCTTTTGCCAACC AACAGACTTGGAGGTCGTCACCGATCATCCTCAGGGGGGTGTTCCAAACT CGGAGGCGGTGTCGGTACACAAGAGACCAGCATCGAAGGCCGAGAGATAT CCCTTCCAACCGCAAGGTGGCGGCCTGGGCTGCACGCTGGATGGGACGGT AACCGTAGAGAGGGCGGCGGGGACGATCGTGATCCACGTGATGCACCACG ACCCTTCCCGCGTCATCTTCACGGGCAGGTTTCTTGCCCGGACGAAGGGA GAGACCCGGTCCGGCCCCAAAGCCGTTGCGGGCCAGAACATGACCCACAA GATCCACGACTTTGGGTTCGGGCCTCCGGTGAAGGGACCGGTGGGGGTGG GAAGGAACTCCTTGGCGAAGAGCACGTTCGTGTCGGAGGAGGGGTCGGGC TTGGTCAAGTACTCCTTGAAGGTGGTGCCGATCTCTCACCGACGTATGCA CGGGGCAGAGGTCAACACCCACACGTACTCGTCCAACGTTGCCTTCGTGC CAGAAGCTGACGTGCTACAAGACCTGTCCTCGTCGTCGCTACTTTTGGGC GTCGAGTTCTCGTACGATTTTACCAGTGTCATGGTCAAATACACCGACAC GAGGCGGTCGATGTTCGAGTTGATAACCAGCGTTTGCGCTATCGTGGGAG GGATTTATACTGTCAGCGGTCTGTTTGTGCGGGGTTTGCAAGTGGTTTCG CCAAAGAAGCACGATTGACAGGGCCAATTGTGTCGCTTTAGGCGTTGTAT ATGGCTACTGTATCCTTACGTCCACGAGGATGATTGGTCGTGATACGAAT TGTTTTCTAAGACGCTTGTTCAGTAAGAGCAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig115:44410..46942+

>mRNA_E-siliculosus-1a_F_contig115.978.1 ID=mRNA_E-siliculosus-1a_F_contig115.978.1|Name=mRNA_E-siliculosus-1a_F_contig115.978.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1926bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig115:44410..46942+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTTACAGCTAACAGGCTTCGGCGGTTCGACCTTGGTCAAAAGGCCGT
CCAAGGCGTCCTCGACAAATCTCTCGTGGGTGCATTAGATGTTTACAGCT
AACAGGCTTCGGCGGTTCGACCTTGGTCAAAAGGCCGTCCAAGGCGTCCT
CGACAAATCTCTCGTGGGTGCATTAGTTTCAATAGCTTCAGTGACGCTTA
TGGCGGTGCTCGTCATATCGGAGCTGCTGGCGTACATCAAGGTGGACACC
TCGAGCCACATGGCGGTCGCGGACTTCCACGAGCACGACGCCGTTACCGC
TCGGTTGCACGCCACGTTCCCCTTTGTAGAATGCAAAGTTTCAATAGCTT
CAGTGACGCTTATGGCGGTGCTCGTCATATCGGAGCTGCTGGCGTACATC
AAGGTGGACACCTCGAGCCACATGGCGGTCGCGGACTTCCACGAGCACGA
CGCCGTTACCGCTCGGTTGCACGCCACGTTCCCCTTTGTAGAATGCAAAG
ACTTGGAGGTCGTCACCGATCATCCTCAGGGGGGTGTTCCAAACTCGGAG
GCGGTGTCGGTACACAAGAGACCAGCATCGAAGGCCGAGAGATATCCCTT
CCAACCGCAAGGTGGCGGCCTGGGCTGCACGCTGGATGGGACGGTAACCG
TAGAGAGGGCGGCGGGGACGATCGTGATCCACGTGATGCACCACGACCCT
TCCCGCGTCATCTTCACGGGCAGGTTTCTTGCCCGGACGAAGGGAGAGAC
CCGGTCCGGCCCCAAAGCCGTTGCGGGCCAGAACATGACCCACAAGATCC
ACGACTTTGGGTTCGGGCCTCCGGTGAAGGGACCGGTGGGGGTGGGAAGG
AACTCCTTGGCGAAGAGCACGTTCGTGTCGGAGGAGGGGTCGGGCTTGGT
CAAGTACTCCTTGAAGGTGGTGCCGATCTCTCACCGACGTATGCACGGGG
CAGAGGTCAACACCCACACGTACTCGTCCAACGTTGCCTTCGTGCCAGAA
GCTGACGTGCTACAAGACCTGTCCTCGTCGTCGCTACTTTTGGGCGTCGA
GTTCTCGTACGATTTTACCAGTGTCATGGTCAAATACACCGACACGAGGC
GGTCGATGTTCGAGTTGATAACCAGCGTTTGCGCTATCGTGGGAGGGATT
TATACTGTCAGCGGTCTGTTTGTGCGGGGTTTGCAAGTGGTTTCGCCAAA
GAAGCACGATTGAACTTGGAGGTCGTCACCGATCATCCTCAGGGGGGTGT
TCCAAACTCGGAGGCGGTGTCGGTACACAAGAGACCAGCATCGAAGGCCG
AGAGATATCCCTTCCAACCGCAAGGTGGCGGCCTGGGCTGCACGCTGGAT
GGGACGGTAACCGTAGAGAGGGCGGCGGGGACGATCGTGATCCACGTGAT
GCACCACGACCCTTCCCGCGTCATCTTCACGGGCAGGTTTCTTGCCCGGA
CGAAGGGAGAGACCCGGTCCGGCCCCAAAGCCGTTGCGGGCCAGAACATG
ACCCACAAGATCCACGACTTTGGGTTCGGGCCTCCGGTGAAGGGACCGGT
GGGGGTGGGAAGGAACTCCTTGGCGAAGAGCACGTTCGTGTCGGAGGAGG
GGTCGGGCTTGGTCAAGTACTCCTTGAAGGTGGTGCCGATCTCTCACCGA
CGTATGCACGGGGCAGAGGTCAACACCCACACGTACTCGTCCAACGTTGC
CTTCGTGCCAGAAGCTGACGTGCTACAAGACCTGTCCTCGTCGTCGCTAC
TTTTGGGCGTCGAGTTCTCGTACGATTTTACCAGTGTCATGGTCAAATAC
ACCGACACGAGGCGGTCGATGTTCGAGTTGATAACCAGCGTTTGCGCTAT
CGTGGGAGGGATTTATACTGTCAGCGGTCTGTTTGTGCGGGGTTTGCAAG
TGGTTTCGCCAAAGAAGCACGATTGA
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