mRNA_E-siliculosus-1a_F_contig1148.962.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: D7FVK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK4_ECTSI) HSP 1 Score: 966 bits (2496), Expect = 0.000e+0 Identity = 511/517 (98.84%), Postives = 512/517 (99.03%), Query Frame = 1
Query: 169 MTPTLLRGLCAHGTKTSVEAARAWRRDARALASATAKRRSAAAVPAARALCSAAPVAVGEEDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
MTPTLLRGLCAHGTKTSVEAARAWRR+AR AS TAKRRSAA VPAARALCSA PVAVGEEDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII
Sbjct: 1 MTPTLLRGLCAHGTKTSVEAARAWRREARVFASVTAKRRSAAVVPAARALCSATPVAVGEEDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 517
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A7S3HU59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU59_9STRA) HSP 1 Score: 503 bits (1294), Expect = 1.220e-166 Identity = 271/455 (59.56%), Postives = 343/455 (75.38%), Query Frame = 1
Query: 382 LPPQDIG--TAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPL------NRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQE-QEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
+PP G +KP+++V+QL ++IVGQ DAKRAVAIALRNRWRR +L +DLR +VIPKNILMIGPTGCGKTEIARR+AK+SQAPFIKVEATKFTEVGFHG+DVD+II+DLVEV ITMTKKK + ++A + I+ CLVG + AS+ SF + LK G E+ I + L N N G+ F NS P D+ LK G +K++ + MK+ DARPL E+ E E+ L+ VT++A+ AVEE+GIVFIDEIDKI ++G+ R ADAS+EGVQRDLLP+IEGSS+ST+HGN++T FILFIASGAFHS KPSD+LAELQGRLPIRV L+GL+EDD+++ILTEP NLIRQQ+ ++K+E V L FT+ AIREIARV N+TVENIGARRLHTV+ER++E ISFDA+E + VV D + VK RVSD+L +D+ K+I+
Sbjct: 47 VPPLTSGLQNVLKPKEVVEQLNKYIVGQPDAKRAVAIALRNRWRRQQLSDDLRNEVIPKNILMIGPTGCGKTEIARRIAKLSQAPFIKVEATKFTEVGFHGKDVDQIIRDLVEVSITMTKKKLKEQVKDAAAAAAEEKILTCLVGVNADASTMNSFREQLKAGLCEDIMIDIDLPPKPEKNDNKAGGPIGIAFDTNSGTFAPN--DLFGKLKVGFNGAGKKRDIKRMKVSDARPLAEEAEAERLLEDFDVTKEAITAVEESGIVFIDEIDKIVSSGDYRGADASSEGVQRDLLPLIEGSSISTKHGNVNTDFILFIASGAFHSAKPSDLLAELQGRLPIRVNLQGLTEDDMFRILTEPVTNLIRQQIALIKSEDVTLTFTEPAIREIARVAFLTNRTVENIGARRLHTVIERVMEEISFDAAEKQGENVVVTD-EYVKTRVSDLLLSTDMRKYIL 498
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: W7TQM4_9STRA (Atp-dependent hsl protease atp-binding subunit hslu n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQM4_9STRA) HSP 1 Score: 504 bits (1298), Expect = 6.460e-166 Identity = 261/456 (57.24%), Postives = 353/456 (77.41%), Query Frame = 1
Query: 391 QDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEE--YNIKVPLNRNNTPDMPGVIFSD-----------NSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
+ + A++P+++V+ L+++IVGQ+DAKRAVAIALRNRWRR KL +DLR ++IPKNILMIGPTGCGKTEIARR+AK+S APFIKVEATKFTEVGFHG+DVD+II+DLVE+ + MTKK++ + + + ++ L G + ++E+F DLL+KG+L + +++VP +R PG +F S N+ + I + +A K +++++ +K+A PL+ ++E+EK +DM+ VTR+A+++VEE+GIVFIDEIDKICN + R ADASAEGVQRDLLP+IEG ++ST+HGNI+T +ILFI+SGAFH CKP+D+LAELQGRLPIRV+LKGL+E+D+Y+ILTEP NLI QQV ++ TE + L+FTDEA+REIARV A VNKTVENIGARRLHTVLERIVE ISFDA++ EGTV++VD LV RV+D+L SD+SK+I+
Sbjct: 140 EPVAAALRPRELVEYLDKYIVGQADAKRAVAIALRNRWRRHKLPDDLRTEIIPKNILMIGPTGCGKTEIARRIAKLSDAPFIKVEATKFTEVGFHGRDVDQIIRDLVEISVNMTKKRRSEAIKSEAQKAVEEKVLQILTGPYAREDAKETFRDLLRKGSLNDRLIDVEVPADRG-----PGGLFDKAGAGPGGGAFAESNPNVSMADFIGKFSRAIMP-KRPMEKRKILVKEAMPLLLEVEMEKLVDMSDVTREAIQSVEESGIVFIDEIDKICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNINTDYILFISSGAFHQCKPADLLAELQGRLPIRVELKGLTEEDMYRILTEPVTNLIAQQVALLSTENIALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVEQISFDAADKPEGTVITVDKGLVHGRVNDLLVESDVSKYIL 589
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A8K1C4S1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4S1_PYTOL) HSP 1 Score: 501 bits (1290), Expect = 1.130e-165 Identity = 267/465 (57.42%), Postives = 352/465 (75.70%), Query Frame = 1
Query: 346 EEDTKVA----FVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKV--PLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
EED VA ++E DIG +KP+++V+QL ++IVGQ DAKRAVAIALRNRWRR K+ EDLRG+V PKNILMIGPTGCGKTEIARR+AK+S+APF+KVEATKFTEVGFHG+DVD+II+DLVE I M KK++ R+ V+ ++ I+D L G SR SF+ LL+ G +E+ I V P+NRN + + + + + MP I ++ + G K + + + M + ++R + E+ME+EK +DM+ V R+A+ EE GIVFIDEIDKIC+ G+ RR AD S+EGVQRDLLP+IEG +ST+HGN++T ILF+ SGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP NL++QQVE++KTE V L+FTDEAIREIARV A +N+T+ENIGARRLHTV+E++VE ISFD+SEME G+ V++ + V ERV +++ +DLSKFI+
Sbjct: 67 EEDVPVASEEEVAHVEAEEDDIGRKLKPREVVEQLNKYIVGQPDAKRAVAIALRNRWRRLKISEDLRGEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKQRKERVRKEVQHLVENRILDALTGANVTERSRASFQRLLQLGEMEDRTISVDVPVNRNMSGNPISFVTGEKA---MP----IGEIFNKAYGEK-KTERKVMTVAESRAVFEEMEMEKAIDMSDVVREAISETEENGIVFIDEIDKICSNGDFRRQADPSSEGVQRDLLPLIEGCVISTKHGNVNTDHILFVGSGAFHSAKPSDLLAELQGRLPIRVELKGLTEQDLYRILTEPVTNLVKQQVELIKTEDVHLEFTDEAIREIARVAAEINQTIENIGARRLHTVMEKVVEEISFDSSEMEAGSTVTITKEFVAERVGKLMKKTDLSKFIL 523
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A024T9I4_9STRA (ATP-dependent protease HslVU, ATPase subunit n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024T9I4_9STRA) HSP 1 Score: 499 bits (1285), Expect = 2.000e-165 Identity = 266/466 (57.08%), Postives = 353/466 (75.75%), Query Frame = 1
Query: 346 EEDTKVAFVNL---ELPPQD--IGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNS---RANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
E +T + VNL E P D +G +KP+++VDQL+++IVGQ DAK+AVA+ALRNRWRR +L +DLR +V PKNILMIGPTGCGKTEIARR+AK++QAPF+KVEATKFTEVGFHG+DVD+IIKDL+E I + KK +M R+ + + IID L G+ +GA SR++F LL+ G L+E I V + +N P+ G I D S +N V D+M+V+ +GGK +++Q M + DARP++E+ME+E +DM V ++A+ EE GIVFIDEIDKIC++G R ADAS EGVQRDLLP+IEGS++ST+HGN++T ILFI SGAFHS KPS++LAELQGRLPIRV+LK L+E DL++ILTEP NLI QQ ++ TE V+L F ++AI+E+ARV +N TVENIGARRLHTVLE++VE ISF+AS+ EG V+++ ++V +RV ML+ SDLSKFI+
Sbjct: 28 EVETPLPVVNLVVEETPMDDDELGRKLKPKEVVDQLDKYIVGQKDAKKAVAVALRNRWRRQQLPDDLRPEVSPKNILMIGPTGCGKTEIARRLAKLAQAPFVKVEATKFTEVGFHGRDVDQIIKDLLENSIQLVKKHRMERVRKDIAGVVEQRIIDALAGQHTGAQSRQTFLKLLRDGELDERMITVDVRSSNNPNSIGAISIDPSGKVNSNNSTVNDLMKVI---SGGKKMEKKQ-MTVADARPILEEMELENAIDMGDVVKEAISEAEENGIVFIDEIDKICSSGAYRGADASDEGVQRDLLPLIEGSTISTKHGNVNTDHILFIGSGAFHSVKPSNLLAELQGRLPIRVELKALTEQDLWRILTEPVANLIVQQKALLATENVNLNFEEDAIKEVARVAYEINHTVENIGARRLHTVLEKVVEDISFEASDYPEGHVLTITKEIVHDRVGAMLKKSDLSKFIL 489
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A836CKY0_9STRA (ATP-dependent hsl protease ATP-binding subunit hslU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY0_9STRA) HSP 1 Score: 500 bits (1287), Expect = 2.880e-165 Identity = 267/450 (59.33%), Postives = 341/450 (75.78%), Query Frame = 1
Query: 397 IGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVG---EKSGASSRESFEDLLKKGALEEY--NIKVPLNRNNTPDMPGVIFSDNSRA----NMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
+G A++P+++V+QL+++IVGQ +AKRAVAIALRNRWRR +L E +R +VIPKNILMIGPTGCGKTEIARR+AK+SQAPFIKVEATKFTEVGFHG DVD+IIKDLVE+ ITM KK +M HR A + + ++D L+ + G SRESF LL++G LE+ ++ VP +R P + N+ + P+ S GGK R +++ M I A PL+ ++ +E+ +DM VT++A+ AVE+ GIVFIDEIDKICNA + R ADASAEGVQRDLLP+IEGS+++T+HGN++T FILFIASGAF CKPSD+LAELQGRLPIRV+LKGL+E+D+Y+ILTEP NLIRQQ ++ EGVDL F D AIRE+ARV A VN+TVENIGARRLHTVLER+VE ISFDA++ ++V +LV RVSDML SDLSK+I+
Sbjct: 83 LGVALRPREVVEQLDKYIVGQPEAKRAVAIALRNRWRRHRLREAMRNEVIPKNILMIGPTGCGKTEIARRIAKLSQAPFIKVEATKFTEVGFHGGDVDQIIKDLVEISITMVKKARMENHRAAARLKAEDTVLDLLLKAPIDLEGNRSRESFRKLLRQGLLEDIAVDVDVPADRG----APSLQLDQNTMTFTVVSGPRAHP-------SAGGK-RTEQKSMPISKALPLLTELSLEEMVDMGDVTKEAITAVEQDGIVFIDEIDKICNASDYRGADASAEGVQRDLLPLIEGSAITTKHGNVNTDFILFIASGAFSQCKPSDLLAELQGRLPIRVELKGLTEEDMYRILTEPVTNLIRQQKALLAAEGVDLVFEDAAIREVARVAAKVNRTVENIGARRLHTVLERVVEEISFDAADTAPSATITVTAELVARRVSDMLIESDLSKYIL 520
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A2D4BX63_PYTIN (ATP-dependent protease HslVU, ATPase subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX63_PYTIN) HSP 1 Score: 496 bits (1278), Expect = 8.260e-165 Identity = 264/445 (59.33%), Postives = 338/445 (75.96%), Query Frame = 1
Query: 394 DIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKV--PLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
D+G +KP+++VDQL ++IVGQ DAK+AVAIALRNRWRR K+ EDLR +V PKNILMIGPTGCGKTEIARR+AK+S+APF+KVEATKFTEVGFHG+DVD+II+DLVE I M KK++ R+ V+ +S I+D L G SR SF+ LL+ G +E+ I V P+ RNN + + D +P I ++ + G K + + + M + ++R + E+ME+EK +DM V R+A+ EE GIVFIDEIDKIC+ G+ RR AD S+EGVQRDLLP+IEG +ST+HGN++T ILFI SGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP NLI+QQ+E++KTE V L+FTDEAIREIARV A +NKTVENIGARRLHTVLE++VE ISFD+ EM G V+V + V ERV ++L+ +DLSKFI+
Sbjct: 24 DMGRKLKPREVVDQLNKYIVGQPDAKKAVAIALRNRWRRLKIPEDLRAEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGRDVDQIIRDLVENAINMVKKQRKERVRKEVQHLVESRILDALTGANGTERSRASFQRLLRLGEMEDRTITVDVPVARNNASNPISFVAGDKG---LP----IGEIFSKAYGEK-KTERKAMTVAESRAVFEEMEMEKAIDMTDVVREAISETEENGIVFIDEIDKICSNGDFRRQADPSSEGVQRDLLPLIEGCVISTKHGNVNTDHILFIGSGAFHSAKPSDLLAELQGRLPIRVELKGLTEQDLYRILTEPVTNLIKQQIELIKTEDVHLEFTDEAIREIARVAAEINKTVENIGARRLHTVLEKVVEDISFDSCEMAPGATVTVTKEFVTERVGNLLKKTDLSKFIL 460
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A5D6XXH3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH3_9STRA) HSP 1 Score: 496 bits (1278), Expect = 3.860e-164 Identity = 264/446 (59.19%), Postives = 342/446 (76.68%), Query Frame = 1
Query: 394 DIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKV--PLNRN-NTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
++G +KP+++V+QL ++IVGQ+DAKRAVAIALRNRWRR K+ +DLR +V PKNILMIGPTGCGKTEIARR+AK+S+APF+KVEATKFTEVGFHG+DVD+II+DLVE ITM KK++ R+ V+ +S I+D L G SR SFE LL+ G +E+ I V P+ RN N +M G I S +P E + G+ + + + + + ++R + E++E+EK +DM V R+A+ EE GIVFIDEIDKIC+ G+ RR AD S+EGVQRDLLP+IEGS +ST+HGN+ T ILF+ASGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP NLI+QQVE++KTE V L+FTDEAIREIARV A +N+TVENIGARRLHTVLE++VE ISFD+S+M G V++ D+V +RV +L+ +DLSKFI+
Sbjct: 65 EMGRKLKPKEVVEQLNKYIVGQADAKRAVAIALRNRWRRQKISDDLRAEVSPKNILMIGPTGCGKTEIARRLAKLSEAPFVKVEATKFTEVGFHGKDVDQIIRDLVENAITMVKKQRKERVRKEVQHLVESRILDALTGANVTERSRASFERLLRLGEMEDRTITVDVPVARNHNANNMNGPISFVTSEKALPIGEIFTKAY-----GEKKTERKVLTVAESRAVFEELEMEKAIDMTDVVREAITETEENGIVFIDEIDKICSNGDYRRQADPSSEGVQRDLLPLIEGSVISTKHGNVSTDHILFVASGAFHSAKPSDLLAELQGRLPIRVELKGLTEADLYRILTEPVTNLIKQQVELIKTEDVHLEFTDEAIREIARVSAEINQTVENIGARRLHTVLEKVVEDISFDSSDMAPGATVTITKDVVADRVGKLLKKTDLSKFIL 505
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A8J2WET5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WET5_9STRA) HSP 1 Score: 490 bits (1261), Expect = 5.250e-162 Identity = 248/438 (56.62%), Postives = 332/438 (75.80%), Query Frame = 1
Query: 406 AMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEEYNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
A+ P+++ D+L+ HIVGQ AKRAVAIALRNRWRR L E+LR +V+PKNILMIGPTGCGKTEIARR++K++ APF+KVEATKFTEVGFHG+DVD+II+DLVE I +T+K++ R ++ I+D L G + +++ SF ++L+KG L++ I V + + P GVI D S N + D + K R + + + I+DARP+IE+ E+EK L+ V R+AV+AVEE+GIVFIDEIDKI NA + R ADASAEGVQRDLLP+IEGS+++T++GN++T ++LFIASGAFH KPSD+LAELQGRLPIRV+L+ L+E+ LYKILTEPK+NLI QQ ++ TE V L+FT+EAIREIARV A N+T+ENIGARRLHT +ERI++ ISFDA + G +V++D + V+ +V DML SD+SK+I+
Sbjct: 42 ALTPRKICDELDTHIVGQDAAKRAVAIALRNRWRRQLLGEELRAEVVPKNILMIGPTGCGKTEIARRLSKLANAPFVKVEATKFTEVGFHGRDVDQIIRDLVEASIALTRKRKAEAFRAEAARAAETRILDTLTGLNAAQATQSSFREMLRKGVLDDRQIDVDVPHSQPPQQSGVIQLDQS--NPVSINDFLGRFSQMASSKGRSERKRLAIRDARPIIEEQELEKLLENIDVNREAVQAVEESGIVFIDEIDKIVNASDYRGADASAEGVQRDLLPLIEGSTIATKYGNVNTDYVLFIASGAFHQAKPSDLLAELQGRLPIRVELEALTEEQLYKILTEPKHNLIAQQRALLATENVMLEFTEEAIREIARVAALANRTIENIGARRLHTCIERIIDEISFDACDYPPGDLVTIDEEYVRSKVDDMLVASDVSKYIL 477
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Match: A0A024GVM8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GVM8_9STRA) HSP 1 Score: 493 bits (1268), Expect = 6.290e-162 Identity = 260/459 (56.64%), Postives = 344/459 (74.95%), Query Frame = 1
Query: 349 EDTKVAFVNLELPPQDIGTAMKPQQMVDQLEEHIVGQSDAKRAVAIALRNRWRRAKLDEDLRGDVIPKNILMIGPTGCGKTEIARRVAKMSQAPFIKVEATKFTEVGFHGQDVDRIIKDLVEVGITMTKKKQMAEHREAVKTTTDSIIIDCLVGEKSGASSRESFEDLLKKGALEE--YNIKVPLNRNNTPDMPGVIFSDNSRANMPKVEDIMQVLKASTGGKNRKQEQEMKIKDARPLIEDMEIEKRLDMAQVTRDAVKAVEETGIVFIDEIDKICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGRLPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISFDASEMEEGTVVSVDIDLVKERVSDMLEGSDLSKFII 1719
ED + L ++G +KP+++V L I+GQ AKRAVAIALRNRWRR K+ DLR ++ PKNILMIGPTGCGKTEIARR+AK+++APFIKVEATKFTEVGFHG+DVD+II+DLVE I + KK++ R+ V+ + I+D L+G S A+SR +FE+LLK G +EE I VP++R N M G S + V +I + KA T + + + + M + ++R + E+ME+E +DM V R+A+ EE GIVFIDEIDKIC+ G+ RSADAS+EGVQRDLLP++EGS +ST+HGN++T ILFI SGAFHS KPSD+LAELQGRLPIRV+LKGL+E DLY+ILTEP ++L+RQQ+E++KTE +DL FT++AIREIARV +N T+ENIGARRLHT++E++VE ISFDAS++ G+ V+V DLV+ERV ML+ +DLSKFI+
Sbjct: 100 EDPSNEEMKLNALDNEVGRKLKPREVVSILNTCIIGQESAKRAVAIALRNRWRRMKVTPDLRPEISPKNILMIGPTGCGKTEIARRLAKLAEAPFIKVEATKFTEVGFHGRDVDQIIRDLVENAINLVKKQKQERVRQQVQQLVERRILDALIGPNSTANSRAAFENLLKTGEMEERMITIDVPVSRGN--GMGGTPISFMASQGPLPVGEI--IGKAYTTMEKKSETRNMTVAESRSVFEEMEMENAIDMTDVVREAIHETEENGIVFIDEIDKICSTGDFRSADASSEGVQRDLLPLLEGSVISTKHGNVNTDHILFIGSGAFHSSKPSDLLAELQGRLPIRVELKGLTESDLYRILTEPVSSLVRQQIELLKTEKIDLDFTEDAIREIARVATDINNTIENIGARRLHTIMEKVVEDISFDASDLSPGSKVTVTKDLVRERVGPMLKKADLSKFIL 554 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1148.962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1148.962.1 >prot_E-siliculosus-1a_F_contig1148.962.1 ID=prot_E-siliculosus-1a_F_contig1148.962.1|Name=mRNA_E-siliculosus-1a_F_contig1148.962.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=518bp MTPTLLRGLCAHGTKTSVEAARAWRRDARALASATAKRRSAAAVPAARALback to top mRNA from alignment at E-siliculosus-1a_F_contig1148:10643..21403- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1148.962.1 ID=mRNA_E-siliculosus-1a_F_contig1148.962.1|Name=mRNA_E-siliculosus-1a_F_contig1148.962.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10761bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1148:10643..21403- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1148:10643..21403- >mRNA_E-siliculosus-1a_F_contig1148.962.1 ID=mRNA_E-siliculosus-1a_F_contig1148.962.1|Name=mRNA_E-siliculosus-1a_F_contig1148.962.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3108bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1148:10643..21403- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |