mRNA_E-siliculosus-1a_F_contig1146.954.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: D8LLI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI9_ECTSI) HSP 1 Score: 1646 bits (4262), Expect = 0.000e+0 Identity = 1005/1114 (90.22%), Postives = 1018/1114 (91.38%), Query Frame = 1
Query: 1 MATLQESQYSVYPMGAAKAAAPNFSDLSKPTVTVDVTRLQAELRALHQRLEFLEVAAQVAAVEHGKDQDPDEGSASSTVESIPSAAAAGRETRPDELDGGSIADDLKTETKAGEMPHSPLMRSATGLRKKAAAASAALQAEVRDLSERLEALAASCKRREKAQGIXXXXXXLAQSMEIKRIQMAIESRVTSDDLQLAVSAADDKIVAVQSSVESALSDRFRRMQDVVHQQMASLLSMVQGLTQSQARRKGSGPYVNARGNLSGG-YGGGPXXXXXXXXXXXXAEAFNKAVKDVVERVLQEGGISGGSGQGDVKMADFESLQEDXXXXXXXMEEKADRQDAISSSLEDAQTRLEDAEANLSALSEELEHSSQDTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECAALRLLVGESRREGQADARQEAEAITARAXXXXXXXXXXXXXXXXSATEKVGSELKRHIKKSEDEAEGFQGAVAGTRALSEKAMAGATAAAARADECDALLQKAETRMGQRLDKAVQNQTTAVEDTLERVAAGESELARAESELRHLIANNETEIMDLRTGQSVLRESSEQATEQLREEVQDALTTMVVDQDFIDSPSSXXXXXXXXXRTGXXXXXSGSDNSRGGVRFEASHXXXXXXXNRSNNFVDRSASDVARLSLAHLGTALRRQGEDVAQKVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKAKACLACDRPFTPSSVTGKPGPTPPDGITGAAVEPDGIPEENSHITKDTFRPHTSHGRLGSPSRSGSIELFEQHSSIHSVMSGSRSSSHSPHVYRGGFKLPKHLKSPLHLPDGEDQSAFGIGHASPLLHKSQSMTGLGSHNHNNGRPSTSGGVRQKRRPPNTGKFHSSSPPATGDGDPDVGLQDGGGNSIISAFTARTEYAAATPNAGESGAERLGFGDPPAGTSMPYFATSHTPSRPGVQHDGSVRLLT 3339
MATLQESQYSVYPMGAAKAAAPNFSDL KPTVTVDVTRLQAELRALHQRLEFLEVAAQVAAVEH KDQDPD GSASST ESIPSA AAGRETRPDELDGG IADDL TETKAGEMPHSP+MRSATGLRKKAAAASAA+QAEVRDLS+RLEALA+SCKRREKAQGI LAQSMEIKRIQMAIESRVTSDDLQLAVSAADDKIVAVQSSVESALSDRFRRMQDVVHQQMASLLSMVQGLTQSQARRKGSGPYVNARGNLSGG Y XXXXXXXXX AE FNKAVKD VERVLQEG ISGGSGQGDVKMADFESLQED XXXXXX EKADRQDAISSSLEDAQ EANLSAL+EELEHSSQDT XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CAALRLLVG+SRREGQADARQEAEAITARAXXXXXXXXXXXXXXXXSATEKVGSELKRHIKKSEDEAEGFQGAVAGTRALSEKAMAGATAAAARADECDALLQKAETRMG+RLDKAVQNQTTA+EDTLERVAAGESELARAESELR LIA+N EIMDLRTGQSVL ESSEQATEQLREEVQDALTTMV+DQDFIDSPSSXXXXXXXXXRTGXXXXX GSDNSRGGVRFEASH RSN+FVDRSASDVARLSLAHLGTALRRQGED AQ VSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKL+TPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLK NSHITKDTFRPHTSHGRLGSPSRSGSIELFE HSSIHSVMSGSRSSSHSPHVYRGGFKLPKHLKSPLHLPDGEDQSAFGIGHASPLLHKSQSMTGLGSHN NNGRPSTSGGVRQKRRPPN GKFH+SSPPATGDGDPD GLQDGGGNSIISAFTARTEYAAATPNAGESGAERLGF DPPAGTSMPYFATSHTPSRPGVQHDGSVRLLT
Sbjct: 1 MATLQESQYSVYPMGAAKAAAPNFSDLGKPTVTVDVTRLQAELRALHQRLEFLEVAAQVAAVEHAKDQDPDGGSASSTAESIPSAVAAGRETRPDELDGGCIADDLTTETKAGEMPHSPVMRSATGLRKKAAAASAAMQAEVRDLSDRLEALASSCKRREKAQGIREKTNALAQSMEIKRIQMAIESRVTSDDLQLAVSAADDKIVAVQSSVESALSDRFRRMQDVVHQQMASLLSMVQGLTQSQARRKGSGPYVNARGNLSGGGYXXXXXXXXXXXXXASEAETFNKAVKDAVERVLQEGRISGGSGQGDVKMADFESLQEDYXXXXXXXXEKADRQDAISSSLEDAQXXXXXXEANLSALAEELEHSSQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAALRLLVGDSRREGQADARQEAEAITARAXXXXXXXXXXXXXXXXSATEKVGSELKRHIKKSEDEAEGFQGAVAGTRALSEKAMAGATAAAARADECDALLQKAETRMGKRLDKAVQNQTTAIEDTLERVAAGESELARAESELRRLIASNGAEIMDLRTGQSVLGESSEQATEQLREEVQDALTTMVIDQDFIDSPSSXXXXXXXXXRTGXXXXXXGSDNSRGGVRFEASHGGGSGNNYRSNDFVDRSASDVARLSLAHLGTALRRQGEDAAQMVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLK-----------------------------------------NSHITKDTFRPHTSHGRLGSPSRSGSIELFEPHSSIHSVMSGSRSSSHSPHVYRGGFKLPKHLKSPLHLPDGEDQSAFGIGHASPLLHKSQSMTGLGSHN-NNGRPSTSGGVRQKRRPPNAGKFHTSSPPATGDGDPDAGLQDGGGNSIISAFTARTEYAAATPNAGESGAERLGFDDPPAGTSMPYFATSHTPSRPGVQHDGSVRLLT 1072
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.550e-46 Identity = 131/337 (38.87%), Postives = 175/337 (51.93%), Query Frame = 1
Query: 2005 LRRQGEDVAQKVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRIT------------------LSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKAKACLACDRPFTPSSVTGKP-GPTPPDGITGAAVEPDGIPEENSHITKDTFRPHTSHGRLGSPSR--SGSIEL------FEQHSSIHSVMSG------------SRSSSHSPHVYRGGFKLPKH 2898
LR + A + LQRS V LR++E +L++K LFW++ D+KLAAH V V L VE A L+ +A LAG+ QRVAKL+A KADYEVIR +++ E P G DWD RVE LR + +F D R+ L K AP E RG+F+ ++ AL+VALSKY PTTPGATLFG++++ A+AC+ACDRPF ++ G P + P G AA +P +P E S ++ FRP T GSP++ G +E+ E +H G S +VYRGGFKLPKH
Sbjct: 699 LRAHAAEGADALEALQRSGVANALALRRVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLAPDALRVLAGNTQRVAKLIAAKADYEVIRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGPA--AEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPFA-TAADGLPCAVSAPPGGNHAAAKPPALPTETSIAVRNNFRPSTC---TGSPTKRSGGGVEVNGDDGDVESEVPLHVAPFGFGXXXXXXXXXXSDVQKPQAYVYRGGFKLPKH 1029
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK) HSP 1 Score: 143 bits (361), Expect = 1.150e-34 Identity = 88/231 (38.10%), Postives = 131/231 (56.71%), Query Frame = 1
Query: 2005 LRRQGEDVAQKVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEI----RGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKAKACLACDRPFTPSSVTGKPGPTPPDGITGAA 2685
LRR+ + +RSSVG+ + R+ E V A+++K LFW+A+ +L AH + G+ C ++E A S +LS EAQ LAG+ QRVAKL+ +AD+E IR+++ PE +DWD +V+ LRQ F + A + + +G+ + R +F+ KL A+++ALSK++ PG TLFGK + AC+ACDRPFT PGP G+ GAA
Sbjct: 24 LRRRARAAEESCGRTERSSVGLAALCRQAEGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELE-ANSSAAHAFSLSPEAQRYLAGNAQRVAKLVGQRADFETIRQVSTSRHPE--DEDWDTKVDQLRQKYRAEFTQGVE------AYAAKQHRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPFT-----SDPGP----GLAGAA 236
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: D7G4P4_ECTSI (Myosin-like antigen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P4_ECTSI) HSP 1 Score: 115 bits (289), Expect = 5.160e-23 Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 1
Query: 2035 KVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKAKACLACDRPFTPSSVTGKP 2649
++++L+RS+V +VT +R+++ + AL+TK+ W ++V+ H + +G D+E A +L Q ++ Q VAK++A +ADYEV R+ + P + DWD +VE LR M +F+ D K P EE+R F KL ++K+A+SKY P GAT+ GK+ L +C+ACDRPF + G P
Sbjct: 150 RMTSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEP-FSLGPAMQKHVSAVSQMVAKIVATRADYEVTRQAVNRKNPGEDS-DWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPV--EEVRETFATKLELSMKLAISKYKPIQAGATILGKVHL-LPSCMACDRPFIDNPGPGDP 349
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: A0A6H5L1L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L3_9PHAE) HSP 1 Score: 109 bits (273), Expect = 8.500e-21 Identity = 74/231 (32.03%), Postives = 118/231 (51.08%), Query Frame = 1
Query: 2035 KVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATV---------------------SRRSR------ITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKAKACLACDRPFTPSSVTGK 2646
++ +L+RS+V +VT +R+++ + AL+TK+ W ++V+ H + +G D+E A +RR ++LS Q L+ Q VAK++A +ADYEV R+ + P + DWD +VE LR M +F+ D K P EE+R F KL ++K+A+SKY P GAT+ GK+ L +C+ACDRPF ++ G+
Sbjct: 196 RMVSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFRPHHHLTPLSSNEFLATRRKASAVCVPLSLSPAMQKHLSAVSQMVAKIVATRADYEVTRQAVNRKNPGEDS-DWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPV--EEVRETFATKLELSMKLAISKYKPIQAGATILGKVHL-LPSCMACDRPFIGPAIRGR 422
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI) HSP 1 Score: 104 bits (259), Expect = 4.870e-19 Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query: 1987 AHLGTALRRQGEDVAQKVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKV 2526
A + TA+R Q + + ++R+++ + +++K+E + LS++DLFW+ V KL AH A + VE AT + R L+ E Q +AG+ QRVAKL+ KAD+EVI++L E+ QDWD RV+ +R + + F+ + R LD+ P G R +F KL LKV
Sbjct: 543 AKVATAVREQQQRREESSRRVERANLSLTLLVKKLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVE-ATSEEQDRFVLTVELQQYIAGNTQRVAKLICQKADFEVIQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYPSHGPF--GARNRDRFFVKLEQGLKV 719
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Match: W7TB27_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB27_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.370e-13 Identity = 72/232 (31.03%), Postives = 115/232 (49.57%), Query Frame = 1
Query: 1981 SLAHLGTALRRQGEDVAQKVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDV----------EDATVSRRSR-ITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLETPEQ-TGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGE-----EIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKAKA-CLACDRPF 2622
S+ L T L Q + ++ L++ G+ ++ V AL T+ W A+DV+L + ++ + C + D + + R + L KE +A R+AK +A+KADY++IR +E+ + T D ++ R+T + RFL K A EV + G EI +F KL A+++ALSK+S G +LFGKI L+A+A CLAC+R F
Sbjct: 73 SIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRH--NVESKDTLTDNQCDAKILQSRETYLMRFLGGV-----KRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQF 297 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1146.954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1146.954.1 >prot_E-siliculosus-1a_F_contig1146.954.1 ID=prot_E-siliculosus-1a_F_contig1146.954.1|Name=mRNA_E-siliculosus-1a_F_contig1146.954.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1114bp MATLQESQYSVYPMGAAKAAAPNFSDLSKPTVTVDVTRLQAELRALHQRLback to top mRNA from alignment at E-siliculosus-1a_F_contig1146:11338..27646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1146.954.1 ID=mRNA_E-siliculosus-1a_F_contig1146.954.1|Name=mRNA_E-siliculosus-1a_F_contig1146.954.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=16309bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1146:11338..27646+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1146:11338..27646+ >mRNA_E-siliculosus-1a_F_contig1146.954.1 ID=mRNA_E-siliculosus-1a_F_contig1146.954.1|Name=mRNA_E-siliculosus-1a_F_contig1146.954.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6684bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1146:11338..27646+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |