mRNA_E-siliculosus-1a_F_contig1146.953.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1146.953.1
Unique NamemRNA_E-siliculosus-1a_F_contig1146.953.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI)

HSP 1 Score: 959 bits (2478), Expect = 0.000e+0
Identity = 519/560 (92.68%), Postives = 521/560 (93.04%), Query Frame = 1
Query:   67 QGTWARGREGETLMLRERVAILAATLLLLKCRSMSGGATGALPDQQRHRRHVPHYGCTPPRAQDFGSRYPQTGRFEARHKTGLVLDDEPAGEEWEEADCECWSATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRXXXXXXXXXXXXXXXXGKDRDNGSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA---QAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPQGVV 1737
            QGTWARGRE E LMLRERVAILAATLLLLKC SMSGGATGALPDQQ+HRRHVPHYGCTPPRAQDFGSRYPQTGRFEA HK GLVLDDEPAGEEWE AD ECW ATIAAIVASGSTLALQRTLKPDEQQSASAEGYGR       XXXXXXXXX       SAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAA ASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPD  GGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEA        QAAGVPKAEASSA VGGR+EGSADD  PVGDDSGK KPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAP G V
Sbjct:   21 QGTWARGREAENLMLRERVAILAATLLLLKCHSMSGGATGALPDQQQHRRHVPHYGCTPPRAQDFGSRYPQTGRFEAWHKRGLVLDDEPAGEEWEGADRECWGATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRQPRHYRRXXXXXXXXXXXXXXXXSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAAKASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPHGAV 580          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE)

HSP 1 Score: 958 bits (2476), Expect = 0.000e+0
Identity = 525/595 (88.24%), Postives = 539/595 (90.59%), Query Frame = 1
Query:  106 MLRERVAILAATLLLLKCRSMSGGATGALPDQQRHRRHVPHYGCTPPRAQDFGSRYPQTGRFEARHKTGLVLDDEPAGEEWEEADCECWSATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRXXXXXXXXXXXXXXXXGKDRDNGSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA---QAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPQGVV----------------AKEREAGREGGGSLEGXXXXXXXXXERWGERT 1833
            MLRERVAILAATLLLL+C SMSGGATGA+PDQQ+HRRHVPHYGCTP RAQDFGSRYPQTGRFEA+HK GLV+DD+PAGEEWEEAD ECWSAT+AAIVASGSTLALQRTLKPDEQQSASAEGYGR      XXXXXXXXXX     N SAPRFRR+RAELSANLDAWRMRRRRARET PAAAIVIRQHLT LTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRK+QNPD SGG+ KLG GKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA   QAAGVPKAEA SASVGGR+EGSADDPAPVG+DSGK +PPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAP G                  AKE+E GREGGGSLEG         E WGERT
Sbjct:    1 MLRERVAILAATLLLLECHSMSGGATGAIPDQQQHRRHVPHYGCTPQRAQDFGSRYPQTGRFEAQHKRGLVVDDQPAGEEWEEADLECWSATMAAIVASGSTLALQRTLKPDEQQSASAEGYGRQQRHIRXXXXXXXXXXXXXXXNSSAPRFRRIRAELSANLDAWRMRRRRARETIPAAAIVIRQHLTHLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKRQNPDGSGGD-KLGMGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPHGAAGGDTGTGDVDKDWGGAAKEQEEGREGGGSLEGERGVGGVKGEGWGERT 594          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.430e-57
Identity = 96/166 (57.83%), Postives = 125/166 (75.30%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLM 1692
            +FA +KA   +  P E V+ LF DNSRVGEYN+HC E+KDLE +   +K+TW+ASG+ GPFKARDFCTLVHF TL+DGT A VS P  HP AP TSRYVRSE+++AG+FMR  P DP++T F  +T VNPGG A +   A +VNSL T  P+TF++++E+AA++ M
Sbjct:  219 KFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAAQQTM 384          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN)

HSP 1 Score: 197 bits (502), Expect = 2.970e-55
Identity = 93/176 (52.84%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1159 PVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKK 1686
            PVG+ S      +F CVKA A+L   P  VY LF DN+RV EYNE C++++DLE  +  +K+TW+AS R+GPFK RDF T VH+RTL D TL  V++  +HPAAP+T RY+R EI+L GN M+PVP DP +T F M+THVNPGG A TR G M++NS   + P++F++ L  A K+
Sbjct:   31 PVGEAS------KFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKR 200          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC)

HSP 1 Score: 193 bits (490), Expect = 9.710e-55
Identity = 84/144 (58.33%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVN 1626
            +FACVKA  ++  P + V+ LF D++RVGEYNEHCRE++D++ LS ++K+TW+ASGR GPFKARDFCT+VH+R L DG L  V++  EH  APR+ +YVRSEILLAGN MRP P DP++T  + +TH+NPGG+ +++AGA++VN
Sbjct:   16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.360e-54
Identity = 132/332 (39.76%), Postives = 175/332 (52.71%), Query Frame = 1
Query:  703 GEGFRRAERLLSAANASG----NVGI--RIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAQAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 1680
            G+G R   R L  A   G    + G+  R  G      RRGRE    G        + G   +  K +EGE    +M  LQ   D  V+ V+ V+  DGWE V E+ GVVV R+++                                   G  D+ A            +FACVKA   L      +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R  PFKARDF T VH+RTL DGT+  +++PVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LC  +PV  +  LE +A
Sbjct:  180 GDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFG----RRGRESLAFG--------NFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXX--------------------XXXXXRGIVDEGAAA----------KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 469          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.630e-52
Identity = 88/162 (54.32%), Postives = 118/162 (72.84%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 1680
            +F+CVKA+AIL+  P  VY LF DNS+V EYNEHC++++D+E +S+D+K+ W+ +   GPFK RDF T+VH+R   DGTL  +++P  HP  P   ++ R+E+LLAGN MRPV GD S+TEF M+THVNPGG      GA +VN +C+  PV FIRRLE AA
Sbjct:  135 KFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAA 296          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 2.630e-51
Identity = 91/162 (56.17%), Postives = 118/162 (72.84%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 1680
            +FACVKA   L      +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R  PFKARDF T VH+RTL DGT+  V++PVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LC  +PV  +  LE +A
Sbjct:  243 KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 404          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH)

HSP 1 Score: 185 bits (470), Expect = 2.670e-50
Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 1174 SGKPKPP--QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPG-----DPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRL 1668
            +G+P  P  +F CV +S IL  PPE VY  F DNSRV EYNE C++VKDLE L  ++KITW+ASGR+GPFK RDF T VH+RT SDG+L   ++  +HP AP T R++R EI++ GN +RP        D SRT   ++THVNPGG AETR G M++NS   S P+ FI+ L
Sbjct:   49 AGRPLGPSAKFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGL 220          
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S0VPD5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPD5_9CRYP)

HSP 1 Score: 179 bits (453), Expect = 2.980e-49
Identity = 80/144 (55.56%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 1255 LFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKK 1686
            LF DN+RV EYNE C++++DLE  +  +K+TW+AS R+GPFK RDF T VH+RTL+D TL  V++  +HPAAPRT RY+R EI+L GN MR VPGDP +T F M+THVNPGG A TR G M++NS   + P++F++ L    K+
Sbjct:    2 LFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLADQTLLVVNRAEDHPAAPRTDRYLRMEIVLGGNVMRAVPGDPQKTSFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDCLKR 145          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLJ0_ECTSI0.000e+092.68START domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5J623_9PHAE0.000e+088.24START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2V5A8_9STRA5.430e-5757.83Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U4ZLH7_HEMAN2.970e-5552.84Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
I2CRQ3_NANGC9.710e-5558.33Lipid transfer protein 5-like protein (Fragment) n... [more]
D8LAW9_ECTSI2.360e-5439.76START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2RES9_9STRA1.630e-5254.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5JSI0_9PHAE2.630e-5156.17START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S4NFJ2_GUITH2.670e-5053.49Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0VPD5_9CRYP2.980e-4955.56Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1146contigE-siliculosus-1a_F_contig1146:7571..11250 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1935
Model size1937
Exons6
Ec32 orthologEc-22_001140.1
Ec32 ortholog descriptionSTART domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03000,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC3.6.4.12
EggNOG OGsKOG2761@1,KOG2761@2759
EggNOG free text desc.lipid binding
KEGG koko:K10779
Seed eggNOG ortholog2880.D7G2E9
Seed ortholog evalue7.6e-30
Seed ortholog score139.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1146.953.1prot_E-siliculosus-1a_F_contig1146.953.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1146 7571..11250 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927659.891307-CDS-E-siliculosus-1a_F_contig1146:7570..77671622927659.891307-CDS-E-siliculosus-1a_F_contig1146:7570..7767Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 7571..7767 -
1696318628.0993602-CDS-E-siliculosus-1a_F_contig1146:7570..77671696318628.0993602-CDS-E-siliculosus-1a_F_contig1146:7570..7767Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 7571..7767 -
1622927659.919167-CDS-E-siliculosus-1a_F_contig1146:7815..79681622927659.919167-CDS-E-siliculosus-1a_F_contig1146:7815..7968Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 7816..7968 -
1696318628.1120107-CDS-E-siliculosus-1a_F_contig1146:7815..79681696318628.1120107-CDS-E-siliculosus-1a_F_contig1146:7815..7968Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 7816..7968 -
1622927659.9402707-CDS-E-siliculosus-1a_F_contig1146:8500..85741622927659.9402707-CDS-E-siliculosus-1a_F_contig1146:8500..8574Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 8501..8574 -
1696318628.1209157-CDS-E-siliculosus-1a_F_contig1146:8500..85741696318628.1209157-CDS-E-siliculosus-1a_F_contig1146:8500..8574Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 8501..8574 -
1622927659.9639075-CDS-E-siliculosus-1a_F_contig1146:9132..92631622927659.9639075-CDS-E-siliculosus-1a_F_contig1146:9132..9263Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 9133..9263 -
1696318628.129937-CDS-E-siliculosus-1a_F_contig1146:9132..92631696318628.129937-CDS-E-siliculosus-1a_F_contig1146:9132..9263Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 9133..9263 -
1622927659.9795635-CDS-E-siliculosus-1a_F_contig1146:9627..109921622927659.9795635-CDS-E-siliculosus-1a_F_contig1146:9627..10992Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 9628..10992 -
1696318628.1391003-CDS-E-siliculosus-1a_F_contig1146:9627..109921696318628.1391003-CDS-E-siliculosus-1a_F_contig1146:9627..10992Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 9628..10992 -
1622927659.994554-CDS-E-siliculosus-1a_F_contig1146:11235..112501622927659.994554-CDS-E-siliculosus-1a_F_contig1146:11235..11250Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 11236..11250 -
1696318628.148366-CDS-E-siliculosus-1a_F_contig1146:11235..112501696318628.148366-CDS-E-siliculosus-1a_F_contig1146:11235..11250Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1146 11236..11250 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1146.953.1

>prot_E-siliculosus-1a_F_contig1146.953.1 ID=prot_E-siliculosus-1a_F_contig1146.953.1|Name=mRNA_E-siliculosus-1a_F_contig1146.953.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=645bp
GHLVHTPLQQHPAHRRARHTAAQGTWARGREGETLMLRERVAILAATLLL
LKCRSMSGGATGALPDQQRHRRHVPHYGCTPPRAQDFGSRYPQTGRFEAR
HKTGLVLDDEPAGEEWEEADCECWSATIAAIVASGSTLALQRTLKPDEQQ
SASAEGYGRQQRHNRRRRRRRHRYHGKDRDNGSAPRFRRMRAELSANLDA
WRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAANA
SGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEA
ERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDG
TPEAPAAPAQAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQF
ACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITW
AASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSE
ILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPV
TFIRRLEVAAKKLMLELQQQQKRAPQGVVAKEREAGREGGGSLEGGRGGG
GVEGERWGERTTAAAAAATVATPDDDAAPRPQPEMPPSPPPPPP*
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mRNA from alignment at E-siliculosus-1a_F_contig1146:7571..11250-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1146.953.1 ID=mRNA_E-siliculosus-1a_F_contig1146.953.1|Name=mRNA_E-siliculosus-1a_F_contig1146.953.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3680bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1146:7571..11250- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGACATTTGGTTCACGTAAGAATGCTCATTGCTTCAACAGACTAAAGTGC TCGTTTGGTTTTAAATTTGAATTGTGTGTATGAGAAGCTGGTTTGTTGCA CATGAGCTGCGCATCACCTCATCACCTTATCCCGCCGCTGGCCTCCTTCC CTGCGGCGCGATACCGGCAGTTTCGCCGAAACGCAACGTCGGCTATTCAA AACCTGTTTTCACACCACCACCCCACTTAGCTTCCATCCCGCGGGCCCCT TGTCATAGACGCCACTGCAACAGCACCCAGCCCACCGGCGTGCAAGACAC ACAGCAGCACAGGGCACGTGGGCGAGAGGCAGAGAGGGAGAAACCCTTAT GCTTCGAGAGCGGGTGGCCATCCTGGCCGCAACGCTGCTCTTGTTGAAGT GTCGCTCGATGTCGGGGGGTGCCACTGGTGCATTACCTGATCAACAACGG CATCGGCGACATGTCCCGCACTACGGCTGCACTCCCCCACGAGCGCAGGA CTTCGGAAGCCGGTACCCTCAGACAGGAAGGTTCGAGGCGCGGCACAAGA CGGGGCTTGTTTTGGACGATGAGCCGGCGGGCGAGGAATGGGAGGAGGCC GATTGCGAGTGTTGGAGTGCCACCATAGCAGCGATAGTCGCTTCGGGATC AACGCTTGCCCTTCAACGAACACTCAAGCCAGACGAACAGCAGTCTGCTT CCGCAGAAGGGTACGGACGACAACAACGGCACAACCGACGGCGACGGCGA CGACGACATCGTTACCACGGAAAAGACCGGGATAACGGCAGCGCTCCACG GTTTCGGCGTATGCGGGCAGAGCTGTCTGCCAACCTGGACGCCTGGCGCA TGAGAAGACGACGTGCTAGAGAAACCACCCCGGCGGCGGCGATAGTCATA CGGCAGCACCTCACCCAGCTGACAGCCCAGCTCTCGGAACTCACGGGCGA AGGGTTCCGCCGGGCAGAAAGACTCTTATCGGCGGCCAACGCCTCCGGCA ATGTCGGCATCCGGATCGCAGGCTGCGCAGAGTTGTTGCGTCGGCGCGGC CGGGAACTGTTTCTTCTCGGCCTGCGGAAGAAGCAGAACCCCGATGACTC GGGCGGAGAGGGGAAACTGGGGAAGGGCAAGGAGGGCGAGGCGGAGCGGA GAAAGATGAGGGAGCTGCAGCTGCTCACCGACAAGATCGTGCAGAACGTG GTGGACGTCGTTGCACGGGATGGGTGGGAAGTGGTCGTTGAACGGGAAGG GGTAGTCGTGCACCGGCAGTACCTTGCGCTTGGCCCCGACGGCACGCCCG AGGCGCCGGCGGCGCCGGCGCAGGCCGCCGGAGTTCCTAAGGCGGAGGCT TCTTCTGCGTCTGTCGGGGGGCGGATCGAGGGCTCCGCCGATGATCCCGC GCCGGTAGGCGACGATAGCGGCAAGCCCAAGCCCCCGCAGTTCGCGTGCG TGAAGGCGAGCGCCATCCTCTCCGTTCCCCCGGAGGTGGTGTACCTGCTG TTCGCCGACAACTCGAGGGTGGGAGAGTACAACGAGCACTGCCGGGAGGT GAAGGACCTGGAGGTGTTATCGCAAGACAGCAAGATCACGTGGGCCGCCA GCGGACGGATGGGCCCCTTCAAGGTGCGTGCTTGTTCCCCTGTGTTTGGT GGTGATCGTCAATTTTCCACCGACGGTGGCTGCACCCTCCGGGTCGTTTG AGCCTTTTGAGCGGACAGGGAGGTGGCAAAGAGATCCCACGACGAAGCAG CAATGCAGGAGGTCGGGGGGGGTGGGGGGGCTGTGAGAAGACAGGGACGT TTACTGCGTCTGCCCCGAGTCCCCAGCATGAGCGGGCGAGCCTCTATATA CGTCGGCAATGAAAACATGATTTCGTTTATTCTTCCCTTGCGAATCATCC CGTTCGAACTCCCGACCTTTGCTGAAGGACATCGAAAGGTCCGCTTTCCG ACCCACCCGCCTGCCCTTCGCAAACTTGCATGTACAGGCTCGAGACTTTT GCACGCTGGTTCATTTTCGAACGCTTAGCGATGGCACCTTGGCTCAGGTC TCGAAGCCGGTGGAGCATCCGGCGGCCCCCCGCACCAGCCGCTACGTTCG GAGCGAGATCCTCTTGGCGTGAGTGGGATCATCGATGTGGCCACGTGGTA GATTCTCACCGTATGTAATCTTCTGCTTTGCCGCTACTGCTGTAGGTTGC GGTAGTGGAAGTTGTTGCAGGGTTGCTGCATGTCGTCCTCTGCTGTGCCG CTACTGCTGTACCTTACAGCAATGGAAATAGCTACAAGGTTGGCGCATGT CGTCCTGCTGCGCTATACCAGTGGAAATTGTTGCACAGGTTGCTCCATGT CGCCCTGTGCTGTGCTGTCCTGCTACCGTACGTATCAGTAAAAGAAAAAG CTACAAGGTTTGCCACGGAAACAGTCGAACGCCCCCCCCCGCGTTGTGTG GTACGTACATACCCGTTCAACGTTCGTCACCACGGGCCACCCGCACACTC GAACGGTTTCCTTTGGTAAAGCCTTCCGCAGTTCATTGGGATTTGGTGCT CAGATAGGGGTCGTCGCCCTTGGGTAGGCTCTGTCCATGTAGGTTTTGAT GAGAAGTGCACTGGGTACGGTTATTGTGTGAAGGTCATGACTGCCCCCAC ATACGCACGTTGTCGTTTTTGCGCAGCGGAAACTTCATGCGACCGGTCCC GGGTGACCCTTCGCGGACCGAGTTTTTGATGGTGACACACGTGAACCCAG GTGATTTCTTGTTTCGAAGACTCAGCTCGGCGTTAATGTCCGTTCGTCGT CCTTCCTGTGCAAGGACCGCGTGTCTTCCTCTCTTGTTCCCCCTCTTGCC CCACTTTTGCTCCCTCTATCTTGCTCTTGTTTTGGTAGAGGCACCCCTTG TCGCGGGAACTCGAATAGAACGCGTCATTTTCCCTGAACCAAAACTTGAT CGGTGCTTTGGGCTGGGGTAAGCTGCTGTTTAGGAAGGAAACCTTAGTCT CCAGAGTTTGGTGTGATGTCATGGAGGCAAAACACATCACACCCCCACGT GTATCCTGTCGTGATCGTTGTTTAGGTGTGGCCGCTTTATGCTGTCCGTG CTACAACCCGGTGTGTCACCCGTACCCCTACAACGTCCTTTTCTGACCCT ACAAAGGGTGGAACGGGTTTCCGTGCTGTCAAGGGTTAACCCGCGTAAGT TACAAAACTGAATGGGATGGACGTGGACAAAACAACTCACCACCTCGCCT TTGAACCGTTGTCTATGCTCTTGCGGCGACAGGGGGCGCCGCAGAGACCA GAGCCGGTGCCATGCTCGTAAACTCACTGTGCACGAGCTCGCCGGTGACC TTCATCCGCAGGCTGGAGGTGGCCGCAAAAAAGCTGATGCTCGAGTTGCA ACAGCAGCAGAAGAGAGCGCCTCAAGGGGTCGTAGGTGGGGACACCGGTG CCGGTGATGTTGATAAGGATTGGGGGGGGACAGCGAAGGAGCGAGAAGCG GGGAGAGAGGGGGGAGGCAGTTTAGAAGGGGGCCGGGGGGGTGGAGGGGT AGAGGGAGAACGGTGGGGGGAGAGGACGACGGCGGCGGCGGCGGCGGCGA CAGTGGCTACTCCGGATGATGATGCCGCGCCTCGGCCGCAACCGGAAATG CCTCCCAGCCCACCCCCGCCACCACCGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1146:7571..11250-

>mRNA_E-siliculosus-1a_F_contig1146.953.1 ID=mRNA_E-siliculosus-1a_F_contig1146.953.1|Name=mRNA_E-siliculosus-1a_F_contig1146.953.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3870bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1146:7571..11250- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGACATTTGGTTCACGGACATTTGGTTCACACGCCACTGCAACAGCACCC
AGCCCACCGGCGTGCAAGACACACAGCAGCACAGGGCACGTGGGCGAGAG
GCAGAGAGGGAGAAACCCTTATGCTTCGAGAGCGGGTGGCCATCCTGGCC
GCAACGCTGCTCTTGTTGAAGTGTCGCTCGATGTCGGGGGGTGCCACTGG
TGCATTACCTGATCAACAACGGCATCGGCGACATGTCCCGCACTACGGCT
GCACTCCCCCACGAGCGCAGGACTTCGGAAGCCGGTACCCTCAGACAGGA
AGGTTCGAGGCGCGGCACAAGACGGGGCTTGTTTTGGACGATGAGCCGGC
GGGCGAGGAATGGGAGGAGGCCGATTGCGAGTGTTGGAGTGCCACCATAG
CAGCGATAGTCGCTTCGGGATCAACGCTTGCCCTTCAACGAACACTCAAG
CCAGACGAACAGCAGTCTGCTTCCGCAGAAGGGTACGGACGACAACAACG
GCACAACCGACGGCGACGGCGACGACGACATCGTTACCACGGAAAAGACC
GGGATAACGGCAGCGCTCCACGGTTTCGGCGTATGCGGGCAGAGCTGTCT
GCCAACCTGGACGCCTGGCGCATGAGAAGACGACGTGCTAGAGAAACCAC
CCCGGCGGCGGCGATAGTCATACGGCAGCACCTCACCCAGCTGACAGCCC
AGCTCTCGGAACTCACGGGCGAAGGGTTCCGCCGGGCAGAAAGACTCTTA
TCGGCGGCCAACGCCTCCGGCAATGTCGGCATCCGGATCGCAGGCTGCGC
AGAGTTGTTGCGTCGGCGCGGCCGGGAACTGTTTCTTCTCGGCCTGCGGA
AGAAGCAGAACCCCGATGACTCGGGCGGAGAGGGGAAACTGGGGAAGGGC
AAGGAGGGCGAGGCGGAGCGGAGAAAGATGAGGGAGCTGCAGCTGCTCAC
CGACAAGATCGTGCAGAACGTGGTGGACGTCGTTGCACGGGATGGGTGGG
AAGTGGTCGTTGAACGGGAAGGGGTAGTCGTGCACCGGCAGTACCTTGCG
CTTGGCCCCGACGGCACGCCCGAGGCGCCGGCGGCGCCGGCGCAGGCCGC
CGGAGTTCCTAAGGCGGAGGCTTCTTCTGCGTCTGTCGGGGGGCGGATCG
AGGGCTCCGCCGATGATCCCGCGCCGGTAGGCGACGATAGCGGCAAGCCC
AAGCCCCCGCAGTTCGCGTGCGTGAAGGCGAGCGCCATCCTCTCCGTTCC
CCCGGAGGTGGTGTACCTGCTGTTCGCCGACAACTCGAGGGTGGGAGAGT
ACAACGAGCACTGCCGGGAGGTGAAGGACCTGGAGGTGTTATCGCAAGAC
AGCAAGATCACGTGGGCCGCCAGCGGACGGATGGGCCCCTTCAAGACGCC
ACTGCAACAGCACCCAGCCCACCGGCGTGCAAGACACACAGCAGCACAGG
GCACGTGGGCGAGAGGCAGAGAGGGAGAAACCCTTATGCTTCGAGAGCGG
GTGGCCATCCTGGCCGCAACGCTGCTCTTGTTGAAGTGTCGCTCGATGTC
GGGGGGTGCCACTGGTGCATTACCTGATCAACAACGGCATCGGCGACATG
TCCCGCACTACGGCTGCACTCCCCCACGAGCGCAGGACTTCGGAAGCCGG
TACCCTCAGACAGGAAGGTTCGAGGCGCGGCACAAGACGGGGCTTGTTTT
GGACGATGAGCCGGCGGGCGAGGAATGGGAGGAGGCCGATTGCGAGTGTT
GGAGTGCCACCATAGCAGCGATAGTCGCTTCGGGATCAACGCTTGCCCTT
CAACGAACACTCAAGCCAGACGAACAGCAGTCTGCTTCCGCAGAAGGGTA
CGGACGACAACAACGGCACAACCGACGGCGACGGCGACGACGACATCGTT
ACCACGGAAAAGACCGGGATAACGGCAGCGCTCCACGGTTTCGGCGTATG
CGGGCAGAGCTGTCTGCCAACCTGGACGCCTGGCGCATGAGAAGACGACG
TGCTAGAGAAACCACCCCGGCGGCGGCGATAGTCATACGGCAGCACCTCA
CCCAGCTGACAGCCCAGCTCTCGGAACTCACGGGCGAAGGGTTCCGCCGG
GCAGAAAGACTCTTATCGGCGGCCAACGCCTCCGGCAATGTCGGCATCCG
GATCGCAGGCTGCGCAGAGTTGTTGCGTCGGCGCGGCCGGGAACTGTTTC
TTCTCGGCCTGCGGAAGAAGCAGAACCCCGATGACTCGGGCGGAGAGGGG
AAACTGGGGAAGGGCAAGGAGGGCGAGGCGGAGCGGAGAAAGATGAGGGA
GCTGCAGCTGCTCACCGACAAGATCGTGCAGAACGTGGTGGACGTCGTTG
CACGGGATGGGTGGGAAGTGGTCGTTGAACGGGAAGGGGTAGTCGTGCAC
CGGCAGTACCTTGCGCTTGGCCCCGACGGCACGCCCGAGGCGCCGGCGGC
GCCGGCGCAGGCCGCCGGAGTTCCTAAGGCGGAGGCTTCTTCTGCGTCTG
TCGGGGGGCGGATCGAGGGCTCCGCCGATGATCCCGCGCCGGTAGGCGAC
GATAGCGGCAAGCCCAAGCCCCCGCAGTTCGCGTGCGTGAAGGCGAGCGC
CATCCTCTCCGTTCCCCCGGAGGTGGTGTACCTGCTGTTCGCCGACAACT
CGAGGGTGGGAGAGTACAACGAGCACTGCCGGGAGGTGAAGGACCTGGAG
GTGTTATCGCAAGACAGCAAGATCACGTGGGCCGCCAGCGGACGGATGGG
CCCCTTCAAGGCTCGAGACTTTTGCACGCTGGTTCATTTTCGAACGCTTA
GCGATGGCACCTTGGCTCAGGTCTCGAAGCCGGTGGAGCATCCGGCGGCC
CCCCGCACCAGCCGCTACGTTCGGAGCGAGATCCTCTTGGCGCTCGAGAC
TTTTGCACGCTGGTTCATTTTCGAACGCTTAGCGATGGCACCTTGGCTCA
GGTCTCGAAGCCGGTGGAGCATCCGGCGGCCCCCCGCACCAGCCGCTACG
TTCGGAGCGAGATCCTCTTGGCCGGAAACTTCATGCGACCGGTCCCGGGT
GACCCTTCGCGGACCGAGTTTTTGATGGTGACACACGTGAACCCAGCGGA
AACTTCATGCGACCGGTCCCGGGTGACCCTTCGCGGACCGAGTTTTTGAT
GGTGACACACGTGAACCCAGGGGGCGCCGCAGAGACCAGAGCCGGTGCCA
TGCTCGTAAACTCACTGTGCACGAGCTCGCCGGTGACCTTCATCCGCAGG
CTGGAGGTGGCCGCAAAAAAGCTGATGCTCGAGTTGCAACAGCAGCAGAA
GAGAGCGCCTCAAGGGGTCGTAGGGGGCGCCGCAGAGACCAGAGCCGGTG
CCATGCTCGTAAACTCACTGTGCACGAGCTCGCCGGTGACCTTCATCCGC
AGGCTGGAGGTGGCCGCAAAAAAGCTGATGCTCGAGTTGCAACAGCAGCA
GAAGAGAGCGCCTCAAGGGGTCGTAGCGAAGGAGCGAGAAGCGGGGAGAG
AGGGGGGAGGCAGTTTAGAAGGGGGCCGGGGGGGTGGAGGGGTAGAGGGA
GAACGGTGGGGGGAGAGGACGACGGCGGCGGCGGCGGCGGCGACAGTGGC
TACTCCGGATGATGATGCCGCGCCTCGGCCGCAACCGGAAATGCCTCCCA
GCCCACCCCCGCCACCACCGTAGCGAAGGAGCGAGAAGCGGGGAGAGAGG
GGGGAGGCAGTTTAGAAGGGGGCCGGGGGGGTGGAGGGGTAGAGGGAGAA
CGGTGGGGGGAGAGGACGACGGCGGCGGCGGCGGCGGCGACAGTGGCTAC
TCCGGATGATGATGCCGCGCCTCGGCCGCAACCGGAAATGCCTCCCAGCC
CACCCCCGCCACCACCGTAG
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