mRNA_E-siliculosus-1a_F_contig1146.953.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 959 bits (2478), Expect = 0.000e+0 Identity = 519/560 (92.68%), Postives = 521/560 (93.04%), Query Frame = 1
Query: 67 QGTWARGREGETLMLRERVAILAATLLLLKCRSMSGGATGALPDQQRHRRHVPHYGCTPPRAQDFGSRYPQTGRFEARHKTGLVLDDEPAGEEWEEADCECWSATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRXXXXXXXXXXXXXXXXGKDRDNGSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA---QAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPQGVV 1737
QGTWARGRE E LMLRERVAILAATLLLLKC SMSGGATGALPDQQ+HRRHVPHYGCTPPRAQDFGSRYPQTGRFEA HK GLVLDDEPAGEEWE AD ECW ATIAAIVASGSTLALQRTLKPDEQQSASAEGYGR XXXXXXXXX SAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAA ASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPD GGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEA QAAGVPKAEASSA VGGR+EGSADD PVGDDSGK KPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAP G V
Sbjct: 21 QGTWARGREAENLMLRERVAILAATLLLLKCHSMSGGATGALPDQQQHRRHVPHYGCTPPRAQDFGSRYPQTGRFEAWHKRGLVLDDEPAGEEWEGADRECWGATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRQPRHYRRXXXXXXXXXXXXXXXXSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAAKASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPHGAV 580
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 958 bits (2476), Expect = 0.000e+0 Identity = 525/595 (88.24%), Postives = 539/595 (90.59%), Query Frame = 1
Query: 106 MLRERVAILAATLLLLKCRSMSGGATGALPDQQRHRRHVPHYGCTPPRAQDFGSRYPQTGRFEARHKTGLVLDDEPAGEEWEEADCECWSATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRXXXXXXXXXXXXXXXXGKDRDNGSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA---QAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPQGVV----------------AKEREAGREGGGSLEGXXXXXXXXXERWGERT 1833
MLRERVAILAATLLLL+C SMSGGATGA+PDQQ+HRRHVPHYGCTP RAQDFGSRYPQTGRFEA+HK GLV+DD+PAGEEWEEAD ECWSAT+AAIVASGSTLALQRTLKPDEQQSASAEGYGR XXXXXXXXXX N SAPRFRR+RAELSANLDAWRMRRRRARET PAAAIVIRQHLT LTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRK+QNPD SGG+ KLG GKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA QAAGVPKAEA SASVGGR+EGSADDPAPVG+DSGK +PPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAP G AKE+E GREGGGSLEG E WGERT
Sbjct: 1 MLRERVAILAATLLLLECHSMSGGATGAIPDQQQHRRHVPHYGCTPQRAQDFGSRYPQTGRFEAQHKRGLVVDDQPAGEEWEEADLECWSATMAAIVASGSTLALQRTLKPDEQQSASAEGYGRQQRHIRXXXXXXXXXXXXXXXNSSAPRFRRIRAELSANLDAWRMRRRRARETIPAAAIVIRQHLTHLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKRQNPDGSGGD-KLGMGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAPHGAAGGDTGTGDVDKDWGGAAKEQEEGREGGGSLEGERGVGGVKGEGWGERT 594
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA) HSP 1 Score: 207 bits (527), Expect = 5.430e-57 Identity = 96/166 (57.83%), Postives = 125/166 (75.30%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLM 1692
+FA +KA + P E V+ LF DNSRVGEYN+HC E+KDLE + +K+TW+ASG+ GPFKARDFCTLVHF TL+DGT A VS P HP AP TSRYVRSE+++AG+FMR P DP++T F +T VNPGG A + A +VNSL T P+TF++++E+AA++ M
Sbjct: 219 KFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAAQQTM 384
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN) HSP 1 Score: 197 bits (502), Expect = 2.970e-55 Identity = 93/176 (52.84%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1159 PVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKK 1686
PVG+ S +F CVKA A+L P VY LF DN+RV EYNE C++++DLE + +K+TW+AS R+GPFK RDF T VH+RTL D TL V++ +HPAAP+T RY+R EI+L GN M+PVP DP +T F M+THVNPGG A TR G M++NS + P++F++ L A K+
Sbjct: 31 PVGEAS------KFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKR 200
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC) HSP 1 Score: 193 bits (490), Expect = 9.710e-55 Identity = 84/144 (58.33%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVN 1626
+FACVKA ++ P + V+ LF D++RVGEYNEHCRE++D++ LS ++K+TW+ASGR GPFKARDFCT+VH+R L DG L V++ EH APR+ +YVRSEILLAGN MRP P DP++T + +TH+NPGG+ +++AGA++VN
Sbjct: 16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.360e-54 Identity = 132/332 (39.76%), Postives = 175/332 (52.71%), Query Frame = 1
Query: 703 GEGFRRAERLLSAANASG----NVGI--RIAGCAELLRRRGRELFLLGLRKKQNPDDSGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAQAAGVPKAEASSASVGGRIEGSADDPAPVGDDSGKPKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 1680
G+G R R L A G + G+ R G RRGRE G + G + K +EGE +M LQ D V+ V+ V+ DGWE V E+ GVVV R+++ G D+ A +FACVKA L +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R PFKARDF T VH+RTL DGT+ +++PVEHPAA R +YVR+EIL+A N MRP DPS+T+F+ VTH+NPGG A++R GA +VN LC +PV + LE +A
Sbjct: 180 GDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFG----RRGRESLAFG--------NFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXX--------------------XXXXXRGIVDEGAAA----------KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 469
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.630e-52 Identity = 88/162 (54.32%), Postives = 118/162 (72.84%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 1680
+F+CVKA+AIL+ P VY LF DNS+V EYNEHC++++D+E +S+D+K+ W+ + GPFK RDF T+VH+R DGTL +++P HP P ++ R+E+LLAGN MRPV GD S+TEF M+THVNPGG GA +VN +C+ PV FIRRLE AA
Sbjct: 135 KFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAA 296
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.630e-51 Identity = 91/162 (56.17%), Postives = 118/162 (72.84%), Query Frame = 1
Query: 1195 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 1680
+FACVKA L +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R PFKARDF T VH+RTL DGT+ V++PVEHPAA R +YVR+EIL+A N MRP DPS+T+F+ VTH+NPGG A++R GA +VN LC +PV + LE +A
Sbjct: 243 KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 404
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH) HSP 1 Score: 185 bits (470), Expect = 2.670e-50 Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 1174 SGKPKPP--QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPG-----DPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRL 1668
+G+P P +F CV +S IL PPE VY F DNSRV EYNE C++VKDLE L ++KITW+ASGR+GPFK RDF T VH+RT SDG+L ++ +HP AP T R++R EI++ GN +RP D SRT ++THVNPGG AETR G M++NS S P+ FI+ L
Sbjct: 49 AGRPLGPSAKFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGL 220
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Match: A0A7S0VPD5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPD5_9CRYP) HSP 1 Score: 179 bits (453), Expect = 2.980e-49 Identity = 80/144 (55.56%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 1255 LFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKK 1686
LF DN+RV EYNE C++++DLE + +K+TW+AS R+GPFK RDF T VH+RTL+D TL V++ +HPAAPRT RY+R EI+L GN MR VPGDP +T F M+THVNPGG A TR G M++NS + P++F++ L K+
Sbjct: 2 LFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLADQTLLVVNRAEDHPAAPRTDRYLRMEIVLGGNVMRAVPGDPQKTSFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDCLKR 145 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1146.953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1146.953.1 >prot_E-siliculosus-1a_F_contig1146.953.1 ID=prot_E-siliculosus-1a_F_contig1146.953.1|Name=mRNA_E-siliculosus-1a_F_contig1146.953.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=645bp GHLVHTPLQQHPAHRRARHTAAQGTWARGREGETLMLRERVAILAATLLLback to top mRNA from alignment at E-siliculosus-1a_F_contig1146:7571..11250- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1146.953.1 ID=mRNA_E-siliculosus-1a_F_contig1146.953.1|Name=mRNA_E-siliculosus-1a_F_contig1146.953.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3680bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1146:7571..11250- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1146:7571..11250- >mRNA_E-siliculosus-1a_F_contig1146.953.1 ID=mRNA_E-siliculosus-1a_F_contig1146.953.1|Name=mRNA_E-siliculosus-1a_F_contig1146.953.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3870bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1146:7571..11250- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |