mRNA_E-siliculosus-1a_F_contig1144.948.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1144.948.1
Unique NamemRNA_E-siliculosus-1a_F_contig1144.948.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: D7FNT2_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNT2_ECTSI)

HSP 1 Score: 1246 bits (3223), Expect = 0.000e+0
Identity = 694/787 (88.18%), Postives = 698/787 (88.69%), Query Frame = 1 
Query:  514 SGYSNESGRSTPGRSKSSHHRPGAAAAFAGPDGMDGGFADPGTFRWDATVADAATAQGEDGSEGDXXXXXXXXXXXXXX-VSRRDGRVGGTGGRRRGKGVRRSSSGKLAAVNPSRSGGGDMIDIALAARHQSVWYIITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEP---------------------------------------IAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADMEDADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGRATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESERPLLLLTTGERRGSTGDTASDSAPEIRRRRSDVSAGGSLASLHKAAAGDKQALQSGNIVQPTVDANRSLARCLAEASRAEEEAWDRLQLLTDSLRTLRGCLGDSSRELQRQQIPDVSHAGRDELSSGADTSGGLRLGDVSLLPSSSSDPKVYCSSPLSRGLN 2754
            SGYS ESGRSTPGRSKSSHHRPGAAA FAGPDGMD GFADPGTFRWDATVADAATAQGED     XXXXXXXXXXXXX  VSRRDGRV  TG RRRGKGVRRSSSGKLAAVNPSRSG GDMIDIALAARHQSVWYIITPESKTHQIFDHI                          EDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVV                                          IAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADMEDADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARI+FFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGRATVTRRGVEVGRL+AGSCFGATAALHGGGVRRESVTCVT+CEMYTIEGKALRRIARAFPGPMS+LKAESERPLLLL  GERRGSTGDTASDSAPEIRRRRSD SAGGSLASLHKAAAGDKQALQSGNIVQPT DANRSLARCLAEASRAEEEAWDRL LLTDSLRTLRGCLGDSSRE QRQ IPDVSHAGRDELSSGADTSGGLRLGDVSLLPSSSSDPKVYCSSPLSRGLN
Sbjct:   19 SGYSKESGRSTPGRSKSSHHRPGAAATFAGPDGMDAGFADPGTFRWDATVADAATAQGEDXXXXXXXXXXXXXXXXXXEGVSRRDGRVADTGSRRRGKGVRRSSSGKLAAVNPSRSGRGDMIDIALAARHQSVWYIITPESKTHQIFDHI--------------------------EDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADMEDADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIQFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGRATVTRRGVEVGRLSAGSCFGATAALHGGGVRRESVTCVTECEMYTIEGKALRRIARAFPGPMSELKAESERPLLLLNAGERRGSTGDTASDSAPEIRRRRSDTSAGGSLASLHKAAAGDKQALQSGNIVQPTADANRSLARCLAEASRAEEEAWDRLHLLTDSLRTLRGCLGDSSREFQRQ-IPDVSHAGRDELSSGADTSGGLRLGDVSLLPSSSSDPKVYCSSPLSRGLN 778
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0A835YVA8_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVA8_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.330e-67
Identity = 165/504 (32.74%), Postives = 249/504 (49.40%), Query Frame = 1 
Query:  949 FDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANR------------------------VVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVV-LYILLVMHWVACGWHLLADMEDADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGRATVTRRGVEVGRLNAGSCFGATAALHGGGV-----------------------RRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESERPLLLLTTGERRGSTG 2316
            ++++GD LT+YV +A+PL VSFQH+  MH  DW+  N VVDV  L+DLA    T +      R                        V+Y+   I + Y+R  L  D +AS+PLT+++G   +S++NK                   L+   ++ ++KN+L  +YN+ KVV  ++ LV+HW ACGWH +A ME  + SWI KDGLE A                ++TVGYGDI AST  ER Y I VML+GA + ALAI +VSHI+ +VVA  +++ +I  HAE FI  HSLP  LA ++ RTLN+SGET    E+ AQ                      I+++ F +D + + PVFVT+    +H     + GE + +E  +S +  F+++G   +T  G  +  + A   F    ++    +                       R  + T VT CE+ TI  + ++++ R FP  M+ LK ++     L+  G     TG
Sbjct:   84 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNK-------------------LAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGF--------------IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQ----------------------ISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTG 532
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: H1W827_9CYAN (Cyclic nucleotide-binding protein n=4 Tax=Oscillatoriales TaxID=1150 RepID=H1W827_9CYAN)

HSP 1 Score: 161 bits (407), Expect = 6.850e-39
Identity = 123/455 (27.03%), Postives = 234/455 (51.43%), Query Frame = 1 
Query:  916 IITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLA-DMEDADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRG--RATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESER 2271
            I  PESK   +++ +   + +Y  V IP  ++F   +   +  W   +   D+ F++D+  RF  AY D+     + +   IA+NY    L  +L AS+PL +M  +    +S  +  + R+P+ LRL +  ++      +TN K I  A+  + ++VL I L+ HWVAC W  +   M     SW++   L+ AP +T Y+ S+YW++TTL+TVGYGDI  ++  E  + ++VM+ G +MYA  IG V+ +++++ A  ++ R      ++++R   +P +L +++        E ++      ++ L+ +P+S++T   L +Y+  + ++  FKD    C   + +++  +   I P   + ++ EE +  E  F+ RG  +A   + G     ++AGS FG  A L+    R  SV  ++ CE++ +  +    +   +P     +K  +E+
Sbjct:    3 IFDPESKEVFLWECLLVLVILYNFVVIPFRIAF---DTTTSHLWLGIDLAADLIFIMDIFLRFRMAYIDQ--GECITDLQKIAQNYRATYLKMNLAASLPLDLMARLFFPQLSVLILAILRIPRLLRLSQFFRIFRRW--ETNVK-INPALVRMTELVLIIFLIDHWVACIWFWIGKSMIAYGDSWLINSNLDTAPIATQYMKSLYWSITTLTTVGYGDITPTSNLEIAFTLVVMILGVSMYAFIIGNVASVVSSLDASQARFREQLDQVQSYMRDRQIPAFLQAQVRDYYQYLWECNRDTSFD-RDFLDEIPNSLKTKIYLYLYQELLEKVPLFKDADPAC---IEALVVKLKPRILPP-NDYIIREEQLGHEMYFIQRGEVQAFSEKTGKVYRIMSAGSFFGEIALLYSTR-RTASVKTLSYCELFVLLKEDFDSVLENYPQFSKKVKEIAEQ 443
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0A6P0RH86_9CYAN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Okeania sp. SIO3I5 TaxID=2607805 RepID=A0A6P0RH86_9CYAN)

HSP 1 Score: 153 bits (386), Expect = 3.940e-36
Identity = 121/444 (27.25%), Postives = 217/444 (48.87%), Query Frame = 1 
Query:  916 IITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQ-HIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADMEDA-DLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRG--RATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFP 2235
            I  P+SK  ++++ +   +T+Y    IP  ++FQ   + +    W     + D   + D+  RF   Y D      + +P  IA+ Y  GLL   LIAS P  +++ +  F  S  +  L R+P+ LRL +  ++ +      +    L+ M    K+V++I L+ HWVACGW L+  +E     SW++   LE A   T Y+ S+YW +TTL+TVGYGDI  +T  E  + ++VM  G +MYA  IG VS +I+ + A  ++ R      + ++R + +P  L  +I          ++ +  +  + LE LP  ++    L +++  I ++  F+        FV  ++ ++   I P + E ++ E    +E  F+ RG  +A   + G     + AG+ FG  A ++    R  S+  +T CE++ +     +++   +P
Sbjct:    3 IFRPDSKFIRLWEVVIVSITIYNAFLIPFRIAFQIRFDGI----WILLYLIGDAILIADIFLRFHLGYFDR--GEYIADPQMIAQYYRSGLLKRHLIASFPGDLIVRIF-FPKSLFIIALLRLPRLLRLPQFYRIFNRWETNIHIDPTLIRM---CKLVIFIALITHWVACGWFLIGSLESRYGESWLINKSLESASTKTQYMNSLYWAITTLTTVGYGDITPATEIEIIFTLIVMFLGISMYAYIIGNVSSLISNIDAAQARYREKLNQIQTYMRENKIPPKLQQKIRDYYQYRWIENRDI--RDYHILEELPHPLKMKLALQLHKEVIEKVPIFQGATSQ---FVEEIVMALKPEILPPS-EYIIREGNWGNEMYFIKRGLVQAFSEKTGSVYRNMAAGTFFGEIALVYEQR-RTASIITLTYCELFVLHKDDFKKVLENYP 429
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0A6L9ZYB5_9CYAN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Okeania sp. SIO3B5 TaxID=2607811 RepID=A0A6L9ZYB5_9CYAN)

HSP 1 Score: 150 bits (380), Expect = 2.390e-35
Identity = 122/451 (27.05%), Postives = 226/451 (50.11%), Query Frame = 1 
Query:  925 PESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGV----HTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADME-DADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRG--RATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLK 2256
            P SK  + +  +  F+T+Y  + +P  ++F+   N     W   + + DV  ++D+  RF  +Y  EY    + +   IA+NY   L +  LIAS P  I+  +      F+I+     L R+P+ LRL +  ++ ++     N    L+ MY   K+V+ I+L+ HWVAC W +L   E + + SW++++ L+ A   T Y+ S+YW +TTL+TVGYGDI  +T  E  + ++VM  G +MYA  +G VS +I+ + A  ++ R      + ++R + +   L  +I          ++ +  +  + LE LP S++    L +++  I ++  F+        FV  ++ ++   I P   E ++ E     E  F+ RG  +A   + G     ++AG+ FG  A ++    R  S+  +T CE++ +E    +++   +P   +++K
Sbjct:    6 PNSKLIRSWQVLIVFITIYNALIVPFRIAFK---NRFDGIWIVLDIIGDVILIIDIFIRFHLSYF-EYGE-YIEDKKKIAKNYLNRLFLRHLIASFPGDIIARIVAPNSLFTIA-----LLRLPRLLRLPQFYRIFNKWETNININPTLIRMY---KLVIIIILITHWVACIWFMLGSWESNGENSWLIRNSLQSASRRTQYINSLYWAITTLTTVGYGDIIPTTEIEIIFTLVVMFLGISMYAYIVGNVSSLISNLDATKARYREKLGQIQTYMRENKISPKLQQKIRDYYQYRWIENRDI--RDYHILEELPYSLKMKLALQLHKEVIEKVPIFQG---ATTQFVEEIVMALTPEILPP-NEYIIREGHWGHEMYFIKRGLVQAFSEKTGTIYRNMSAGTFFGEIALVYEQR-RTASIITLTYCELFILEKDDFKKVLENYPDFAANVK 436
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0YJ56_LYNSP (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Lyngbya TaxID=28073 RepID=A0YJ56_LYNSP)

HSP 1 Score: 145 bits (366), Expect = 1.560e-33
Identity = 120/455 (26.37%), Postives = 215/455 (47.25%), Query Frame = 1 
Query:  916 IITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADMED-ADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGR--ATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESER 2271
            II PESK   I++ +   +T+Y  +AIP  ++FQ         W   + + D   + D+  RF   Y D+ A   + +   I ++Y       +LIAS P+ I++     S+   V  +AR+   +RL+R  + L+      N  N+   +  ++ +VL I L+ HWVAC W  +      ++ SW+    LE+   +T Y+ S+YW++TTL+TVGYGDI  +   E  + +++M  G +MYA  IG V+ +I  + A   + R      +A++R   +P +L  ++        E       +  + L+ LP S++T   L +++  + ++  FK+       F+  ++  +   I P   + ++ EE +  E  F+ RG   A   + G     + AG  FG  A L+    R  SV   T CE++ +      ++   +P     +K  +E+
Sbjct:    3 IIHPESKVVIIWESLIVLVTLYNYLAIPFRIAFQ---TSSGGVWLILDILSDSILITDIFLRFHMGYIDQGA--FINDKQKIHQHYRANDFKINLIASFPIDILIRFLFPSLPGYVIGIARL---IRLLRGFQCLAIFRRWENNVNVNPVVIRMINLVLIIFLIDHWVACLWFFIGKTTKISNESWLTTASLENVRTTTQYMKSLYWSITTLTTVGYGDITPTNDLEIAFTLVIMFLGVSMYAFIIGNVASLIANLDANQGRFREKLDQIQAYMRERRIPSHLQQQVRDYYQYMWEYSHDASMEL-DFLDELPHSIKTRIYLHLHQELLEKVPLFKEADKG---FIEDLVIKLRPRILPPE-DYIIREEQLGHEMYFIKRGEVIAFSEKTGRVYRTMTAGMFFGEIALLYSSR-RTASVKTQTYCELFVLYKDDFDQVLENYPRFWEKVKEIAEQ 443
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0A0F5Y7J9_9CYAN (Cyclic nucleotide-binding protein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5Y7J9_9CYAN)

HSP 1 Score: 145 bits (365), Expect = 2.110e-33
Identity = 116/454 (25.55%), Postives = 211/454 (46.48%), Query Frame = 1 
Query:  919 ITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADMED-ADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGR--ATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESER 2271
            I PESK   +++ I   +++Y  ++IP  ++FQ   +     W   + + D   + D+  RF   Y D+     + +   I +NY    L  +LIAS+P+  ++ +    +   V  + R P+ LR  + + +        N   +++ M NLV     I L+ HWVAC W  + ++   +  SW+    LE A  ST Y+ S+YW++TTL+TVGYGDI  +   E  + +++M  G +MYA  IG V+ +I  + A   + R      +A++R   +P  L  ++        E       +  + L+ LP S++T   L +++  + ++  F+D       F+  ++  +   I P   + ++ EE +  E  F+ RG   A   + G     +  G  FG  A L+    R  SV   T CE++ +  +   ++   +P     +K  +E+
Sbjct:    4 IHPESKIIIVWESIIVLVSLYNYLSIPFTIAFQTDAD---GIWLILDLLSDTVLIADIFLRFKIGYIDQ--GEFITDRQKIRKNYRSTDLKINLIASLPIDFIVRIFISPVPGYVIGIIRFPRLLRGFQCLGIFRRWENNVNVNPVVIRMINLVVT---IFLIDHWVACLWFFIGEVAQISGESWLTNASLESARTSTQYLNSLYWSITTLTTVGYGDITPTNDLEIVFTLVIMFLGVSMYAFIIGNVASLIANLDANQGRFREKLDQIQAYMRERRIPAILQQQVRDYYQYMWEYSHDASMEL-DFLDELPHSIKTRIYLHLHQELLEKVPLFQDADKG---FIEDLVIKLKPRILPP-NDYIIREEQLGHEMYFIKRGEVIAFSEKTGRVYRTMTTGMFFGEIALLYSSR-RTASVKTQTYCELFVLYKEDFDQVLENYPRFWEKIKEIAEQ 443
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: F0XYE9_AURAN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYE9_AURAN)

HSP 1 Score: 150 bits (379), Expect = 2.810e-33
Identity = 130/491 (26.48%), Postives = 225/491 (45.82%), Query Frame = 1 
Query:  916 IITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAY-HDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLT--IMLGVHTFSISNKVTRLARMP--QTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADME------------------DADLSWIVKDG------------LEDAPAST---LYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLN--ISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGRATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESE 2268
            ++T  S+T ++ D  G    ++V    P  V+F   +++    + A   ++ + F  D+A RF TA+ HD     +      IA  Y RG  +FDL+A+VP +  I+ G    +  +   R+  +P  + LRL    ++     +   R ++      L  + +  L++ H + C W+++   +                  D DL++    G            L D    T    YV +VYW  +TL+TVGYGDI AST  ER + ++VMLTG + YA  +   S I+ T     ++ R        F+R + LP  L+ +++R  N   S  T +M        L+++P ++R   +L + R  IA+I F  ++   C  F+  ++  M       AGE V+ E  +++E  F+V+G+A V  +G +V   NAGS FG    + G  VR  S+  +   E+ T+   +L  +   +P    +L   ++
Sbjct:  160 VLTTASRTFRVIDACGLVAVVFVAFWTPFRVAFVERDDVA---YDAVEDLISLAFFADMALRFNTAFRHDN--GMLERRRSVIAARYCRGSFLFDLLATVPWSRIIVDGAGRTAYVSDRYRVPVLPMFRALRLAWMPRLREYLGKGAQRLDVNQGFARLAYIAVLQLVITHTLGCIWYIIGKCDVASRDAREDVICVSSFGLDDDLAYFAASGADGYSSRCTWLELYDMRRGTNVEKYVAAVYWAFSTLTTVGYGDIKASTNDERRFAMIVMLTGVSWYAYIVSTTSSIMATFEWESNRIRERMLKVSGFLRENKLPDDLSRQMVRFYNHFYSSNTWKMASYDGSELLQVMPPTLRCDVILYVERDLIAKIPFLDNK---CGAFIADLV-VMLQPCSVSAGEYVIREGTIANEMFFLVKGKAVVLAKGAKVHAFNAGSYFGEVGCIRGA-VRTASIKAIMRSELQTLHKSSLLSLIEEYPDTRDELNITAD 640
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0A846G2R8_9CYAN (Cyclic nucleotide-binding domain-containing protein n=3 Tax=unclassified Okeania TaxID=2634635 RepID=A0A846G2R8_9CYAN)

HSP 1 Score: 142 bits (359), Expect = 1.290e-32
Identity = 118/447 (26.40%), Postives = 221/447 (49.44%), Query Frame = 1 
Query:  925 PESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLVKVVLYILLVMHWVACGWHLLADME-DADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRG--RATVTRRGVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLK 2256
            P+SK  + +  +   +T+Y    IP  ++F+   N     W   + + DV  ++D+  RF   Y  EY    + +   IA+ Y   L    L+AS+P  ++  +   + S  +  L R P+ LRL +  ++ +      N  + L+ M    K+V+ I+L+ HWVAC W ++   + +A+ SW++ + L+ A   T Y+ S+YW +TTL+TVGYGDI  +T  E  + ++VM  G +MYA  IG VS +I+ + A  ++ R      + ++R + +P  L  +I          ++ +  +  + LE LP S++    L +++  I ++  F+        F   ++ ++   I P   E ++ E     E  F+ RG  +A   + G+    + AG+ FG  A ++    R  S+  +T CE++ +E   L+++   +P   +++K
Sbjct:    6 PDSKFIRFWQVLIVSITIYNAFIIPFRIAFK---NRFDGIWIILDIIGDVILIMDIFIRFHIGYF-EYGE-YIQDKKKIAQRYRIRLFSRHLVASIPGDLIARIIAPN-SLFIIALLRFPRLLRLPQFYRIFNRWETNININSTLIRM---CKLVILIILITHWVACIWFMIGSWKSNAENSWLISNSLQSASRRTQYINSLYWAITTLTTVGYGDITPATEIEIIFTLVVMFLGISMYAYIIGNVSSLISNLDAAKARYREKLGQIQTYMRENKIPPELQQKIRDYYQYRWIENRDI--RDYHILEELPYSLKMKLALQLHKEVIEKVPIFQG---ATRHFFEEIVMALKPEILPP-NEYIIREGNWGHEMYFIKRGLVQAFSEKTGIIYRNMGAGTFFGEIALVYEQR-RTASIITLTYCELFILEKDDLKKVLENYPDFAANVK 436
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Match: A0A2R5GKH3_9STRA (Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKH3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.180e-32
Identity = 120/476 (25.21%), Postives = 224/476 (47.06%), Query Frame = 1 
Query:  910 WYIITPESKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCFLVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIMLGVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEA-----------EKTNRKNILL--AMYNLVKVVLYILLVMHWVACGWHLLA----DMEDADLSWIVKDGLEDAPASTLYVTSVYWTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTVVARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISG--ETHQMLEKKAQNTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDHIYPKAGERVLLEEGVSDETIFVVRGRATVTRR-GVEVGRLNAGSCFGATAALHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESERPL 2277
            W+I+ P ++  ++++ +   + +YVV  +P+ V F       A     F+ +VDV F++D+    + AY D     +V EP  I  +Y R   + D++ASVP+   + + +     ++ RL ++                            ++  R NI +  A   + KV+  + LV H + C W+ +A    D    D SWIV+ G+E+    + Y++S+YW+ +TL+T+GYGD+ A T  E+ + I+ M+ G + YA  I  +S I+T    R +  +R +R    F+R   +P  +   IM   + +   E+      +  + L +L + +RT   L ++R  + ++ FF ++    P F+ S +  +    Y K G+ +      +DE  F++ GRA V    G +   +  GS FG    +      R SV   ++C +Y +    LR +   +P   S+++  +++ L
Sbjct:  323 WFIMLPRNRFRRVWEALLIAMLLYVVFTVPVRVCFDIEVTGGAA---TFDLLVDVLFILDIFVNVVCAYEDSNGELIV-EPKLIVLHYMRTWFILDVVASVPIYRFVSLDSSVEEAQINRLGKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXQQWERHNIGMNGAFTRMFKVIFGVFLVTHLIGCFWYFVAWAGHDTIPED-SWIVQYGIENHDDMSKYLSSIYWSFSTLTTIGYGDVRAFTNREKIFSIVCMVVGVSWYAFVISTISSIMTMFDRRTAAVKRKQRLLVDFMRETHMPWAMRRRIMTYFDYATTRESSDADPNEMASVLSMLSTQLRTEVTLHVHRHLVPKVPFFLNKS---PQFIASTVSLLRPLQYAK-GDYISTRGQHADEMYFLIEGRAVVVLSDGRKFKSIIQGSYFGEIGCMLSER-HRVSVVAASECHVYALSKADLRSLMDEYPDVASEIRFNAKKRL 788
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1144.948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT2_ECTSI0.000e+088.18Cyclic nucleotide-binding domain-containing protei... [more]
A0A835YVA8_9STRA1.330e-6732.74Cyclic nucleotide-binding domain-containing protei... [more]
H1W827_9CYAN6.850e-3927.03Cyclic nucleotide-binding protein n=4 Tax=Oscillat... [more]
A0A6P0RH86_9CYAN3.940e-3627.25Cyclic nucleotide-binding domain-containing protei... [more]
A0A6L9ZYB5_9CYAN2.390e-3527.05Cyclic nucleotide-binding domain-containing protei... [more]
A0YJ56_LYNSP1.560e-3326.37Cyclic nucleotide-binding domain-containing protei... [more]
A0A0F5Y7J9_9CYAN2.110e-3325.55Cyclic nucleotide-binding protein n=1 Tax=Limnorap... [more]
F0XYE9_AURAN2.810e-3326.48Cyclic nucleotide-binding domain-containing protei... [more]
A0A846G2R8_9CYAN1.290e-3226.40Cyclic nucleotide-binding domain-containing protei... [more]
A0A2R5GKH3_9STRA2.180e-3225.21Potassium/sodium hyperpolarization-activated cycli... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1144contigE-siliculosus-1a_F_contig1144:15424..27211 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2577
Model size2757
Exons15
Ec32 orthologEc-12_003490.1
Ec32 ortholog descriptionCyclic nucleotide-binding domain
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
EggNOG OGsKOG0498@1,KOG0498@2759
EggNOG free text desc.voltage-gated potassium channel activity
Seed eggNOG ortholog2880.D7FNT2
Seed ortholog evalue0.0
Seed ortholog score1257.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1144.948.1prot_E-siliculosus-1a_F_contig1144.948.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1144 15604..27211 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927658.478933-UTR-E-siliculosus-1a_F_contig1144:15423..156031622927658.478933-UTR-E-siliculosus-1a_F_contig1144:15423..15603Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1144 15424..15603 +
1696318627.363273-UTR-E-siliculosus-1a_F_contig1144:15423..156031696318627.363273-UTR-E-siliculosus-1a_F_contig1144:15423..15603Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1144 15424..15603 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927658.4935892-CDS-E-siliculosus-1a_F_contig1144:15603..163841622927658.4935892-CDS-E-siliculosus-1a_F_contig1144:15603..16384Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 15604..16384 +
1696318627.3727252-CDS-E-siliculosus-1a_F_contig1144:15603..163841696318627.3727252-CDS-E-siliculosus-1a_F_contig1144:15603..16384Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 15604..16384 +
1622927658.5066066-CDS-E-siliculosus-1a_F_contig1144:17225..173021622927658.5066066-CDS-E-siliculosus-1a_F_contig1144:17225..17302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 17226..17302 +
1696318627.382893-CDS-E-siliculosus-1a_F_contig1144:17225..173021696318627.382893-CDS-E-siliculosus-1a_F_contig1144:17225..17302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 17226..17302 +
1622927658.5193324-CDS-E-siliculosus-1a_F_contig1144:18062..182481622927658.5193324-CDS-E-siliculosus-1a_F_contig1144:18062..18248Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 18063..18248 +
1696318627.4001162-CDS-E-siliculosus-1a_F_contig1144:18062..182481696318627.4001162-CDS-E-siliculosus-1a_F_contig1144:18062..18248Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 18063..18248 +
1622927658.5301485-CDS-E-siliculosus-1a_F_contig1144:18630..187891622927658.5301485-CDS-E-siliculosus-1a_F_contig1144:18630..18789Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 18631..18789 +
1696318627.410669-CDS-E-siliculosus-1a_F_contig1144:18630..187891696318627.410669-CDS-E-siliculosus-1a_F_contig1144:18630..18789Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 18631..18789 +
1622927658.5410008-CDS-E-siliculosus-1a_F_contig1144:19021..191071622927658.5410008-CDS-E-siliculosus-1a_F_contig1144:19021..19107Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 19022..19107 +
1696318627.4198592-CDS-E-siliculosus-1a_F_contig1144:19021..191071696318627.4198592-CDS-E-siliculosus-1a_F_contig1144:19021..19107Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 19022..19107 +
1622927658.5525901-CDS-E-siliculosus-1a_F_contig1144:19340..194821622927658.5525901-CDS-E-siliculosus-1a_F_contig1144:19340..19482Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 19341..19482 +
1696318627.431162-CDS-E-siliculosus-1a_F_contig1144:19340..194821696318627.431162-CDS-E-siliculosus-1a_F_contig1144:19340..19482Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 19341..19482 +
1622927658.5648434-CDS-E-siliculosus-1a_F_contig1144:20386..205451622927658.5648434-CDS-E-siliculosus-1a_F_contig1144:20386..20545Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 20387..20545 +
1696318627.4472551-CDS-E-siliculosus-1a_F_contig1144:20386..205451696318627.4472551-CDS-E-siliculosus-1a_F_contig1144:20386..20545Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 20387..20545 +
1622927658.576795-CDS-E-siliculosus-1a_F_contig1144:21090..212161622927658.576795-CDS-E-siliculosus-1a_F_contig1144:21090..21216Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 21091..21216 +
1696318627.4555676-CDS-E-siliculosus-1a_F_contig1144:21090..212161696318627.4555676-CDS-E-siliculosus-1a_F_contig1144:21090..21216Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 21091..21216 +
1622927658.5900865-CDS-E-siliculosus-1a_F_contig1144:22094..221901622927658.5900865-CDS-E-siliculosus-1a_F_contig1144:22094..22190Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 22095..22190 +
1696318627.46561-CDS-E-siliculosus-1a_F_contig1144:22094..221901696318627.46561-CDS-E-siliculosus-1a_F_contig1144:22094..22190Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 22095..22190 +
1622927658.6031847-CDS-E-siliculosus-1a_F_contig1144:23827..239201622927658.6031847-CDS-E-siliculosus-1a_F_contig1144:23827..23920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 23828..23920 +
1696318627.4754262-CDS-E-siliculosus-1a_F_contig1144:23827..239201696318627.4754262-CDS-E-siliculosus-1a_F_contig1144:23827..23920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 23828..23920 +
1622927658.6191406-CDS-E-siliculosus-1a_F_contig1144:24271..244111622927658.6191406-CDS-E-siliculosus-1a_F_contig1144:24271..24411Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 24272..24411 +
1696318627.4846008-CDS-E-siliculosus-1a_F_contig1144:24271..244111696318627.4846008-CDS-E-siliculosus-1a_F_contig1144:24271..24411Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 24272..24411 +
1622927658.6318061-CDS-E-siliculosus-1a_F_contig1144:24818..249361622927658.6318061-CDS-E-siliculosus-1a_F_contig1144:24818..24936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 24819..24936 +
1696318627.4924722-CDS-E-siliculosus-1a_F_contig1144:24818..249361696318627.4924722-CDS-E-siliculosus-1a_F_contig1144:24818..24936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 24819..24936 +
1622927658.644965-CDS-E-siliculosus-1a_F_contig1144:25633..257501622927658.644965-CDS-E-siliculosus-1a_F_contig1144:25633..25750Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 25634..25750 +
1696318627.4998333-CDS-E-siliculosus-1a_F_contig1144:25633..257501696318627.4998333-CDS-E-siliculosus-1a_F_contig1144:25633..25750Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 25634..25750 +
1622927658.657026-CDS-E-siliculosus-1a_F_contig1144:26293..264341622927658.657026-CDS-E-siliculosus-1a_F_contig1144:26293..26434Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 26294..26434 +
1696318627.507391-CDS-E-siliculosus-1a_F_contig1144:26293..264341696318627.507391-CDS-E-siliculosus-1a_F_contig1144:26293..26434Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 26294..26434 +
1622927658.6777396-CDS-E-siliculosus-1a_F_contig1144:27055..272111622927658.6777396-CDS-E-siliculosus-1a_F_contig1144:27055..27211Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 27056..27211 +
1696318627.517453-CDS-E-siliculosus-1a_F_contig1144:27055..272111696318627.517453-CDS-E-siliculosus-1a_F_contig1144:27055..27211Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1144 27056..27211 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1144.948.1

>prot_E-siliculosus-1a_F_contig1144.948.1 ID=prot_E-siliculosus-1a_F_contig1144.948.1|Name=mRNA_E-siliculosus-1a_F_contig1144.948.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=859bp
MFHAVHQMPGEDLGSPGAGALPMFREQRSSSHGLGGSSGGGARGRSGVAT
ATGSGRRTHRVGGDGSGILSASVEAGGGGGGSSDSNEPPRVLEMRPLHHG
GTAAAAARRRRSGYSNESGRSTPGRSKSSHHRPGAAAAFAGPDGMDGGFA
DPGTFRWDATVADAATAQGEDGSEGDDEEEEEEEEEGGGGVSRRDGRVGG
TGGRRRGKGVRRSSSGKLAAVNPSRSGGGDMIDIALAARHQSVWYIITPE
SKTHQIFDHIGDFLTMYVVVAIPLFVSFQHIENMHAEDWHAFNFVVDVCF
LVDLAARFLTAYHDEYANRVVYEPIAIARNYSRGLLVFDLIASVPLTIML
GVHTFSISNKVTRLARMPQTLRLIRSIKMLSEEAEKTNRKNILLAMYNLV
KVVLYILLVMHWVACGWHLLADMEDADLSWIVKDGLEDAPASTLYVTSVY
WTVTTLSTVGYGDIFASTIAERTYCILVMLTGATMYALAIGAVSHIITTV
VARHSQSRRIERHAEAFIRMHSLPQYLASEIMRTLNISGETHQMLEKKAQ
NTLELLPSSVRTSTLLCIYRRQIARIKFFKDRKDVCPVFVTSVMRSMHDH
IYPKAGERVLLEEGVSDETIFVVRGRATVTRRGVEVGRLNAGSCFGATAA
LHGGGVRRESVTCVTDCEMYTIEGKALRRIARAFPGPMSDLKAESERPLL
LLTTGERRGSTGDTASDSAPEIRRRRSDVSAGGSLASLHKAAAGDKQALQ
SGNIVQPTVDANRSLARCLAEASRAEEEAWDRLQLLTDSLRTLRGCLGDS
SRELQRQQIPDVSHAGRDELSSGADTSGGLRLGDVSLLPSSSSDPKVYCS
SPLSRGLN*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1144:15424..27211+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1144.948.1 ID=mRNA_E-siliculosus-1a_F_contig1144.948.1|Name=mRNA_E-siliculosus-1a_F_contig1144.948.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11788bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1144:15424..27211+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCCAGCAACAGGCAAGGCTGTGTGGCGCGACCTGTACGACGGCCTCAAG
CTGACTTGACTCTGTCCCGCCGTGTTCTGGGCACGCGGGGAGGTGCAGGG
AACTTGTTTTCCTCTTGGGGTCCCGCACAAGTGAGTTCAAGCTTTTCTTC
ATCCCTAGTTTTTGTGCAGCAGCAGCAGCAATGTTTCACGCAGTGCACCA
GATGCCGGGCGAGGACCTCGGTTCTCCCGGGGCCGGCGCCTTGCCCATGT
TCCGAGAGCAGCGCTCCTCCTCGCACGGCCTCGGCGGAAGCAGTGGTGGT
GGTGCAAGGGGCCGGAGCGGAGTCGCGACGGCCACCGGCAGCGGGAGGAG
AACCCACCGGGTCGGCGGCGATGGCAGCGGCATTCTGTCCGCGTCCGTTG
AAGCCGGCGGCGGCGGCGGCGGTTCGTCGGATTCAAATGAACCGCCTAGA
GTGCTCGAGATGAGGCCGCTGCACCACGGGGGAACCGCCGCCGCCGCCGC
TCGGCGAAGGAGGAGCGGGTACTCCAATGAAAGTGGCAGGTCGACGCCAG
GACGGAGCAAAAGTAGTCATCATCGTCCGGGCGCCGCCGCTGCTTTCGCG
GGACCGGATGGAATGGACGGCGGCTTTGCGGACCCGGGCACATTCCGATG
GGATGCGACCGTCGCCGACGCCGCCACTGCTCAGGGGGAGGACGGTTCGG
AGGGCGATGATGAGGAGGAAGAGGAAGAGGAGGAGGAGGGGGGGGGAGGG
GTCAGCAGGAGGGACGGGAGGGTGGGTGGCACGGGTGGCAGGAGGCGAGG
CAAGGGCGTAAGACGGAGCAGCAGCGGCAAGCTTGCGGCGGTAAACCCTT
CGAGGTCGGGGGGGGGGGACATGATCGACATTGCGCTTGCTGCAAGGCAC
CAGAGCGTGTGGTACATCATCACGCCTGAGTCGAAGACGCACCAGATTTT
CGACCATATCGGTGAGAGAGATTTGTGTTAAGCCTCTGGGATTTCGATAT
GTGTCCAAGCTGGGTAGGCTGTTTTTGACAAGCTCCACACTTTTGCATGC
GGGACAATTAACAAGCAGTTCTGTGTACCCACGGCAGCAACGGCAACAGC
TGCGTTGTGTCTTTCGAACTGCCTGTACAAGAACGAATCATGGTTGGGCA
CTGCCGCTGTTGCCTACGATCACAGCACACGGGGGGCACCCTTGAAGCTT
TTGGCGCAATAGCGGTGCGATGCTGGCCCAGTATTAGGCCGCTCTTTCCC
GTACGAGTTGAGTGTATGGCAACGTTGCTCTCTCGAGTACATTCAGTCAC
AGAAAGGTATCCTACCCTTTCGAGATAGTAGCATACCACAAGCAGTCGAA
GGGGAGGTGTTCAATTCTTTGCAGGTTTGGCGCCAGGACGAAGGAATCGC
CGGCGAAACAAAGGCCAATCACGCCTCATTTCGACGATGAATCAATCCAC
CAGCCGTCCACGGTGGGCACATGGCTTGCTTGGCTGCCCGCAACGTCCGG
GCCATGTATCTCTTGCCTGCGGCAGTAACACTCTGGCTGACAGCTGATTG
TGTTGCTTATACAGATGCCAGTTTTCCCTCCTACTCTGCTGTATGTATGA
CAACCGATTGTTGGCTCGCTGCCGGATTATATGCAAAGTCTGGCCAGCAG
TCCTACCACCATCATATTTTCATTTCTCAACCTGCTCACCGGCAGGGAAA
CAGGGGATCCACCTGAGAGGCCGTCGGTTGTAGAATGCTGACGCGATTAC
GGTCCCTGCTATCGGTGCTGTGATGCGGTTTGTTTGTTTCTCATCCTCCC
AGGCGACTTCTTGACGATGTACGTGGTGGTGGCGATACCGCTCTTCGTCT
CGTTCCAGCACATCGAAAACATGCACGCGGTATGTATGTATGTCCCACAC
ATACACACGCACTCGCAGATGATCTTTTATGTACAAAGCGTTCTTTATGT
CTTATGTTCGACTCAAGAACCGTAAGTCTGTGCTTACAGCCAACGTCACT
GCGGGGTATCTGTTGGCTGTGATAGTCGCTACGTTTTTTTCGGCATTTAT
GTTTATTGACCCTGCGGCGGTGGCCACGGTTGCGACACACATCTACAGTA
GCGCGACACGTGCGTGGTCGGCAGGCACTAATGGCGCGCAACACGTGGAC
TTCAGTTGAAACTTGAGGTGCTCACGACGACCGATCTGGACGGCGAAGCT
GCGGGTGTTGTAGTTGATCGGACCTCCACTCACCTTGGGCAGTCGTACGT
ACTCTACAACCGCTCTTTTGTGAAGGTGCATGAATTTGTGCTATTAAACA
CAGTCAGTAGACTGCGCAGTATAGGTCACGTCATTGCGTGGTTCTGCCGC
AAGTGTGTTGCAGAAGTCATCCGGTTACGCACCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCGCGCGCGC
CGCGCGGGGTGGGGGAGGGCGCGTGGGGGGCTCGTGTGNNNNNNNNNNTA
ACACACTCATGAGACGCCGCCGGTATGGGCCCGGCCTTGCGGGGTTCCTC
CCCCGCTGCGTGCCCGAAGCCCCCCCGTTACCCCCCCCCCCCCCCCCCCC
CGCCCCGTTCCCTAAATTTCTGCCCCGACCGACTGGCAGGAGGACTGGCA
CGCCTTCAACTTCGTGGTGGACGTGTGCTTCCTGGTGGACCTCGCGGCGC
GGTTCCTGACTGCGTACCACGACGAGTACGCCAACAGGGTGGTCTACGAG
CCCATCGCGATCGCGCGGAACTACTCCCGCGGGCTGCTCGTGTTCGACCT
CATCGCCTCTGTCCCGCTGACCATCGTGAGTTCGGGTTCGCCGCAGGCGT
GTCGGGTCTGGTTTCGGGAGAGCCCCCGATGGTTGGCTGTTTGGTGTGTC
TTTGTTGTCTGTGTCTTGAGTGCTTAGAACAAGATCGAACATGGCCGCGT
ATGGCTGTCTGTGCCTTGGGGTGTTCGTTTATGAGGCGTGTGTTTGTTTG
CTGCTTGAAGCGCACGTATTTTGCCCTCGACTGACTCTGACTCTTGCATC
TGTGTTTGCGCTCCCCGTTGGGCCCATTGTTATAGAGTCTATTCGACCCC
GTAAATATACCCCCTCGGAGCGAGACCGTCGCTGACGGACTCACACATTT
CGTCACCCACGTCCTTCGGTCGCGACCCCTTGATGTCGGTTTTGCCTCCT
CGAACAGATGCTGGGCGTGCACACGTTCAGCATCTCCAACAAGGTGACAA
GGCTGGCCAGGATGCCCCAGACCCTGAGGTTGATTCGGTCTATCAAGATG
CTCAGCGAGGAGGCGGAGAAGACCAACCGAAAGAACATTCTTCTCGCCAT
GTACAACTTGGTAAAGGTAGGATAACATGTTTGCACGTACGCCGCATGTG
CTCGCCTATGCGCCCTTAGCTGATCTTAGCCTTAGCTGAATCTCAAGATT
AACTGAGCCTTAAGGGTGTAGACTGGCGCCTGTGTGGAACGGATGGGATG
AATAGAAAAATGGCAACCAAAAGGACTCGCAGCAGTATCCCGTAAGACTC
ACTACTACGCAGGACCGAACGCTTTTCCCTTGTCCAATCGCCGCTAAGGT
TGTCCTCTACATCCTTCTGGTGATGCACTGGGTGGCGTGCGGCTGGCACC
TCCTGGCGGACATGGAGGACGCTGACCTGTCATGGTGAGATGCTGATGCG
GAGCGTGAGAATAGAAGACATTATGGGTAGACGTTCCAGAAAATTGTCAT
GGGCATATGGTTCGGAAATGAGAGAGGATGCCATACGAACATCAAGAACA
AGGACACGCCGATAGCAACGTAGATGCCCCGAGAGCCGAGAAGAATCTAT
AGACTACAAGCTTTGCAAGATTCTGTTCTTGATGTCGTCTTGGACTCCTT
CTCCTTCGTCCCGTCAGGATCGTGAAAGACGGCCTGGAAGACGCGCCGGC
CTCCACGCTCTACGTGACCTCGGTGTACTGGACCGTGACCACGCTGTCCA
CTGTCGGCTACGGCGACATCTTCGCGAGCACGATCGCCGAGAGGACATAC
TGCATCCTCGTGAGTTAGTCATGAAGTGCTGCTGCGACCAGGGTTCTAGG
TGGTGCCCCCGTTTTCGTTGGCCGGCCTCAGGGTGGGGGCGAGCTAGAGC
GGAACACGGGAGGGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTA
GACCTTCGGCCTCGCGTCCCTACAAAGCCGGGACGGAGCACGCCGGGTTC
TCACCGAACCAGGCTCTCACATCACCAAGCGCTGAGGGTTTTCGGCATGT
TGTGCACCGGGGGGGGGGGTAGATTTCTCACCTGTTCACGGGAGTGCCGG
AGGTGACACAAATTACCGCACCCCCTGGACGGATTTGCAACGCTCGACTA
CTCCACAGCAGAAAGAATAGTGTTGCCCGAAAATGTCGGCGTTGGAACCG
TCTCGTTGAGATCTTTCCGGAAACGCATCATTTGAGGTTGGCGTCCTTTT
CTTCGTGGAGTAGTCGAGCTTTGAAAATCGGTCCAGAAGTTGTGGTATCT
TGTGTCGCCTACAATAGTCCGTCGGACCCCAGGTCCAGTCAATTTGAGGA
GATGAGCGCTTGTCTCCGAGATGAGCGCTTGTCTCCTCGGTGACTTCTGA
CGCGTCGGACGCAAAACCGAGCACCCGGCTGCGTCGCGATGCCATTCTTA
GGGCGTTTCCTCGCAGTGTCGTGCTGAGCCGTTTCATGGTTGAAGAGCCG
ACCAGGTCTGGGGACACGCCGCTCACATACGTATGTTCTGCTGTTGCGGA
ACCCCCTGCCCCTGTACCTGCCTGAACGGTGTTTTGCCACAGAACGGTTG
ATGTTCTCTCTCACGAGCACGCATCATGACGTCTTGCGCCCCCCGCCCCT
CCGCCTGCTCGTGTCGCCGCGCGCCTCGCCGCCATGTGAACGGCTTCTTT
TTTTTTTGCTCAGGTGATGTTGACGGGGGCCACGATGTATGCCCTCGCGA
TCGGTGCCGTGAGCCACATCATCACCACCGTGGTCGCCAGGCACTCGCAG
TCGAGGCGCATAGAGCGGCACGCGGAGGCGTTCATCCGCATGCACTCGCT
CCCGCAGTACTTAGCCTCCGAGGTAAACAAGAAGAAGCCTGCCTTTGTGC
ACCATTATTTCATTTTTTTTACGGTGCACCGTGGCAATGAAAAAATATAT
GGGGGTGCGTTTTTTAAGGGTTCGGCGGCTTTCTCGTATGTGACCAATCC
TCCAACTCGCCAACCTGGATGTGTTGGTGTGGTATTCTGCTGCCGTTACG
TGCCTCGTCTGCTTGCTTTTCTCGAGCAACACTAGGCAAGAATCCCGGCC
AGCCTCGCTGAGGGTGCAACCTTCTCGGTTTTTGCTGTCCTCGTCATTAT
GCTCTTCCTTGGGTTTTGAGCTGCACTTTCTTTGTTTGTTTATTATGCGT
TTGTTATCTTGTGTTTGTTTCGCTCCGCAAACGCGCCGCAAGTTTTCACC
GACGCAGACAAAGCACCTGTACGTGCTTACAAGCAGTGCCATGTTTTTCC
CTTCCCCTCCGAGGCTTATGCAAGCGTGTAAACAAATAACAACGTTCCCC
CCCCCCGCTTTTTTTGGCCCGTGCCGTTCTTGTATGCGGACGCCGTGTGA
ACAAAACTCGTCCGCAGATCATGCGCACGCTCAACATCTCCGGGGAGACG
CACCAGATGCTGGAAAAGAAGGCTCAAAACACTCTCGAGCTGCTGCCCTC
GAGCGTTCGCACCTCCACGCTTCTGTGCATCTACCGACGACAGGTAGCTT
GGGTAGGGGGGCGACCGTGAATGCGAGGTGTTTTGCACATGGCTTGGCAC
ACAGATATATACTCTGCTATTTCTTGGTCGCGAAACTCAGGGCGCGACGG
CTCCTAGTTTGTCGTATTTTTCGGCCTCGCTAGCAATGCTGTCGGCTACG
GTATGTGCAAGTCCGGGACTCGCGTGTACGTGTGCTCTGTGCGTTCGGGG
GTGCGGACGGTACAAGTTGTGGTGCTGCTGTTGGTTGTGGACTGCAGCGG
CCTTTCCGTTGTTATTTGCGGGCCTGTATTTGGTTGGTTGTGACACATGT
TTGCCTCGTGCGGGCTGTTCGGGGCTTTGTCCAGCAGCAGCAGCAGCAGC
AGCAGTTTTGAGTGTTGGCGTCACAGTTTCACTGCTTTCGTGGCCCAATA
GCGACGCTACCGCCAGTAGCACCGCTGTTGACACAGGAAGAACGTTCGGT
GGTGTTGTCGATACCGTGTGGTGTCAGGCTTAGTGTTGGCCCCATGTCTC
ACGATATTTTATCGCTGAGGGTTCGAGATGTGATTCAGGCCAGGCGACAA
ACACAACGGCCGGAGAGTCGGCATCATGACATGCCCTTGCGCCGCGTTTC
AGCATCAAGTCGAGGCCTGGAGCCACTCACACATATCGTGTCACCCTGAG
CACGAGGAGTGGCGGGAACGGAAGACCACTCTCCTCCTCTCCTTGTTGGC
TGTCGACCATCTTCGGTGTTTTATGTGTACTGTACGGCGTGGGCGAACCC
CGCACGCTGGCCTGGTTTCGCGCGGTTTGGTTTGTTTGCCAATCTCTCGT
GCTTTTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCTGC
CGCTGCTGCTGCTGCTGATAGATCGCGAGGATAAAGTTCTTCAAGGATCG
GAAGGATGTCTGCCCGGTGTTCGTGACGTCCGTCATGCGATCCATGCACG
ACCACATTTACCCCAAGGTGTGTTTGTAGCGTGCTTCTACAGCGAAGGGG
GGTCTGCCAGACCAGGTTTGCTGGTCTGTGTGGACGTTGGCGGGGGCGTA
CTCTTATTCTTATGTTCTGCATGCCTTAGCGGTTAGACCATCGACCACAT
GTCCTCGAGAGGACGGGGCGTTGTTCCCACAGGACCGATCACCGATGGCC
AATCGCTCCTTCCTGCTTTGCCAAAGGTGGCTCAAAAACGTCTTCCCTAG
TCTATCTATCCGATCGATGTCACCTCCCGGCTTTCCAACTCACTTCCGAT
GCCCCAGTACAATGAACGTTTTATCCTGGCTATCCCATGCCTCAAAACAT
CTCCCTGTACTTTTGTTCTACTTTTCCCAGCTCAGTCATGTACACTTCCC
TCTCCTTGTACAGCCGACATTCCGCGACTACATGAACACGGTCTTCGCAC
TCTGAGCCGCAATCACATTTGAACTTGGCGTCTTCATCGTCTACCTTCCG
ATATCTTCGTGTACGTTCTCGAAGGCCAATGTCCCCGATCCTGAATTTGA
CCTGCAGCTTTGTCTCTGCACCCATTGGTCCGTGCAGGTACTCCTTGAAC
CCTATTCCTTCTTTCAACATTCCGTACACATCTAGACCCTCCTATCCTTG
TTTTCTTTTCTTAGATTATGTTCTTCGCTCTCGGCAAAAGCAACGGATAT
CTTCTGCTTGGAAACCTGTTCTTTTTTTTTGTCATCACTTCAAACCAGAG
TTCACAACATTTCTACCGGTTTTACTCCGACCCGTGGTCGCACAGGAGAG
CCCCTCTCCCTCCCCTCCTCTCCTGCGGTACTATTGCATAAGATTTTTTG
AAGAAGAGTTAGGCCCTCTCTTCCCTGTGTACACACGAACTAGCGCTATC
CACAACCATGAACGCAAGCGAGAGAAAAACTCATGTTGTAAGAAAAGCTC
ACTCACTCCGGGACTCGAACCCATGACCTGGAGCTAGAGGGATGCGCGGA
TTCCCAACTAGACCACCGCGGCGACTTTTAGACCCTCCGTATCCAGCGTA
TCGCCTTCGTCAATTTCGAACCCCTTCCATACGTCACCTACAACGTTGAC
CCACTCCGTGGGTTGTCTACCCTTCTTCTTGTTTGCCCACTCCGCCTCCC
AAGCTATTCTCGGTAACCTCTCCTTTCCCATACCGCACATGCGATACTGC
CATGTCAGCTTCTCTTCCCGATCGTAGGGATCGGATCCCCAGTTCTGCCC
TGACGGCTGCATTACTGGTGCGCTTGGAACATCCAAGGATGATTTTCTCT
GCTTTCATCTGCGCCGCCTCGAGCTCTTTGACTTCTGATTTCCTTCCCAT
ACTTCTCCGGCGTACTCTAGATGCGGTACGATTACGCTCTTCAAGAGGAC
GTTGGTGGGGAGCGGTGTTTTTGTTCCCGGTAGTAGCCTCGGCAGCTCGT
TCGATAGTTGCTCGCGCTGGGAGCATTCGAACAGCCCGGGTACTGAATAG
CCGTGCGTGCACAAGAGCCGCAGTAGCCGTGCGTGCATAGGAGCCTTGCA
GAACACAACACAGAAGAGAAAGAGGGAACTGACGCGAGTGGTTGGTGATC
TCTCCTCCCTCGCTCTTGACCGGTGTTATCGCTGGTGTTTGCTCTTGCTG
GCAGGCTGGGGAGCGCGTCTTGCTCGAGGAAGGCGTTTCGGATGAGACCA
TCTTCGTCGTGCGCGGGCGGGCGACGGTCACTCGCCGAGGCGTGGAGGTG
ATAATACCAGAAAAAGAAAGAAAGAACAAAATCGGCCCGTTCCTCACTCG
ATACAATCGGTGGGTGGTGTTGGTTGTCGGGGGGGGGTGCAGTTGTGTTT
TCGCTTGAGGTGGTGTGGTTGGTTATCCGTAGATTGGAGTCTAACCGGTC
GACGGGTGCTTTCGGGAGCATTTCCGGAGAAGTAACGGGCGGCCCTTGCG
CTTGTGTGCCAGGTGGCCTACAGCCCGTTCCCGACACTATTTTCGTGCGA
ATGTGGTTCATTTCATGTTTTTTCCGTGTTTCGCGAACAACAGGTTGGAA
CTTGCGTGCATGTTTCATGTTTTCCCTGTTGTTTTGCGATCCCGACAGGT
TGGAAGGCTGAACGCCGGGTCGTGCTTTGGGGCGACGGCGGCGCTTCACG
GGGGTGGTGTTCGCAGAGAATCGGTTACGTGCGTGACGGACTGCGAGATG
TACACCATCGAGGGGAAAGCGCTAAGACGGATCGCGAGGTAGTCCTGCCC
TTTCGTTCGCTACTCGATGGGGTTCTTCTGCCCTCGGCACAACGGCTGCT
TGTTGATCTGTCCATGGAGACGGGCCGGGCGCGGTCCTGTTCATGCGCTT
GTTGCAGGATCTATTTGTCGTGTGTGTTTGTGTGTGCTGCCTGTTTCGAG
ATTCCTGTGAGCCCGCCGTCGACGAGACAACGGGCGAAGAGTGTCAACCT
CCAGAACCAGCATGTCCCCCCCCCCCCCCCTACCAAACAAAAAAATTCGC
ATTTTTATCGTGTAGCTGTGGGTTTTGTTGCTCTGTAAAATGCACTCGCA
ACATGTTTACGCTATCGGCCTTCGTTTTGACGCGGGCGTCGTTCGACGTG
CAATGTCAATTGTGATTGGCGTTGGCAAATGGCGAAAAACACCAGGGCAT
TTCCGGGGCCCATGTCCGACCTCAAGGCCGAGTCGGAGCGGCCGCTGCTG
TTGCTGACCACCGGGGAGCGTAGAGGGAGCACCGGCGACACGGCTTCTGA
CTCCGCTCCGGAGGTGGGTTTTATCGCTGTACCGCTGTTATCTTAGGCAC
AACGGGGAGCGGCGATGGGTTAAATTATATTTGTGTTGCTTTGTTCCGGG
CTCATTCTGGTTCTGTAGCCGGTGCATGGAACGGGTTGCCGTTCGTCGGC
TCCAAAGGCGAGGTTTTACAACAATCCCCAACTTGAGATCTGCGGGAAGT
GGTAGCAAGCTGCTCGGCGCTGCACCGTAGACTGTATCAATGGAGTCAGG
TATTTTTTTTGTTGAGTGGAGATGCTTCGACGGGGTTGTCGAGCAGTTTG
CTTCTGAGGGTTTAACCGCGTATCTCCGGATGACTAATCGACAATCCCGC
CGCCTTATTGTTCGAGGCCGTTGGCAGACTCTCGATTTCGGTAGCATTTA
TTTGCCACCGCGACGGAACCCCAATACAAGAGATAGCTCGTCTGGAAGAT
TGTTGCCCTCGAACTGCCTTTCTTTTTCCTAACGAAGCTAGCTAGCTATT
TTCGCACGTGAACCAGTATGCGACCCTGCTAAGCACGACAAGACATGAGA
TGACAACTGACGAGTCGTTGGTGAAACCGACGATAAAGCTAGTTTCGCAC
GTGAACCAATATGCGACCCCCTCTGCCTAGCAAGACATGACCACTGACGA
GTTGTCTTTGAATCCGCTATACACACCTGGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCAGATTCGAAGGCGTCGGAGTGACGTTTCCGCTGGCGGGTCTT
TGGCGTCTCTCCACAAGGCGGCGGCCGGCGACAAGCAAGCGCTACAATCG
GGGAACATTGTTCAGCCTACCGTGGATGTGAGGGGTTGGTTCTCCAGGAC
TTGTCGGTTGTACAATATATGGTTCGAATCCGTTTCGTCTACTGCTTTCT
GAGTGGCCCGGGGGTCGGCTTCTCACGGCAGCGGCTGCCATGCGATTCGT
GTGTGTGTGTCCTCTTTTTGCTTGCGGTCGTGCACTCTGCCTCGCACACC
TCTATATCAACTTATCGCTCACCTCTTTCCCCCACTATCTTGTCCACGCA
TCTGCCAACCAACTCCCCCCCCTCCACTTCCATTTCTTTTTCCTACGCTT
TGCCGTCGTGCCCTCAACACCATTGTAGCTGCTCCGTTTCCTGGCTGTGG
TGTGTTTCTGCGCCCTTGAATGCCGTGGGATTTTCGAGCTTCGTACTCAT
AGATTACTATCTGTCTCTGATATTTACTTTTTTTCGGACCCTTGGGGTCC
ATTGTCTTCGAGTATACATTTTTTTCTGCTGTAAGTACGCCTGTGTGCTC
GGGTAGAGAGATTGCAACAGTTTTTATTTGGAGAAAACAAACAATTCTTG
CGTTGTTGTTGTGCCGACAGGCCAACCGAAGCCTAGCGAGATGCCTCGCG
GAAGCAAGCCGGGCGGAGGAGGAGGCGTGGGACCGACTGCAGCTCCTCAC
CGACAGCCTGAGGACCTTGCGTGGCTGCCTCGGCGATAGTAGCCGAGAGC
TCCAACGCCAGGTGGGCGATCGGTGCATGCCTATTTTTTTTGTGCTGAGT
GACCGATGCCAAACCCACGAAGATGAGCGAGAGTCTCTTGCAGCGAGTCG
TACAGCAGTACGAACTGAACCTTGAAGCGCTATCTTTTTTTGGTAGTTTC
CCAGCGGGCATTGGTTGAGAAGGTGGTGCCGAAAATGTGGTCTCTTTTGT
GTCGTTCTCCTGGCGCGGATAGGCACGTGATATCCGTAGATGATTCGACG
GCGCCACCGTACGATTCTTCTTTCGGAAAGTATTCCGAACGCCGGACGGC
GTTCCGGTTTAAGTTACTCGTTGAGAACGCCAATTTTGTTTTTCACTAGT
TAACGAGGGAAAAGTCTTGCCAGCACTGCCCGACCCAGGCTGTTCCGACC
CAGGCTCTTTCCCGGTGCTCCAAAGCTAGGCCGTTCGGAAACCCCTGTGG
TTGGCTATCTTTCGGACAAGGCTGCCACATGCCTGAGCGCGAAGAACTTG
TGGCAAAACACGTGACGCATTTGCTACTCGCGCGCCTCTCGCTCAAGGTT
CGTCTCGCTGCTCGCTTGCTCGCTTGCTCACTTGCTCCCTTGCCCTGTGT
CATTTTCCGCTTTGCTGCACTACCTTTCCCAGCAGATCCCAGACGTGTCT
CACGCCGGTCGCGACGAGTTGTCGAGCGGGGCTGACACCTCGGGCGGGTT
GCGGTTGGGCGATGTCAGCCTCCTACCCTCTTCGTCGAGCGACCCCAAAG
TGTACTGTAGTTCTCCGCTCTCCCGAGGGTTGAATTGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1144:15424..27211+

>mRNA_E-siliculosus-1a_F_contig1144.948.1 ID=mRNA_E-siliculosus-1a_F_contig1144.948.1|Name=mRNA_E-siliculosus-1a_F_contig1144.948.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5154bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1144:15424..27211+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTTCACGCAGTGCACCAGATGCCGGGCGAGGACCTCGGTTCTCCCGG
GGCCGGCGCCTTGCCCATGTTCCGAGAGCAGCGCTCCTCCTCGCACGGCC
TCGGCGGAAGCAGTGGTGGTGGTGCAAGGGGCCGGAGCGGAGTCGCGACG
GCCACCGGCAGCGGGAGGAGAACCCACCGGGTCGGCGGCGATGGCAGCGG
CATTCTGTCCGCGTCCGTTGAAGCCGGCGGCGGCGGCGGCGGTTCGTCGG
ATTCAAATGAACCGCCTAGAGTGCTCGAGATGAGGCCGCTGCACCACGGG
GGAACCGCCGCCGCCGCCGCTCGGCGAAGGAGGAGCGGGTACTCCAATGA
AAGTGGCAGGTCGACGCCAGGACGGAGCAAAAGTAGTCATCATCGTCCGG
GCGCCGCCGCTGCTTTCGCGGGACCGGATGGAATGGACGGCGGCTTTGCG
GACCCGGGCACATTCCGATGGGATGCGACCGTCGCCGACGCCGCCACTGC
TCAGGGGGAGGACGGTTCGGAGGGCGATGATGAGGAGGAAGAGGAAGAGG
AGGAGGAGGGGGGGGGAGGGGTCAGCAGGAGGGACGGGAGGGTGGGTGGC
ACGGGTGGCAGGAGGCGAGGCAAGGGCGTAAGACGGAGCAGCAGCGGCAA
GCTTGCGGCGGTAAACCCTTCGAGGTCGGGGGGGGGGGACATGATCGACA
TTGCGCTTGCTGCAAGGCACCAGAGCGTGTGGTACATCATCACGCCTGAG
TCGAAGACGCACCAGATTTTCGACCATATCGATGTTTCACGCAGTGCACC
AGATGCCGGGCGAGGACCTCGGTTCTCCCGGGGCCGGCGCCTTGCCCATG
TTCCGAGAGCAGCGCTCCTCCTCGCACGGCCTCGGCGGAAGCAGTGGTGG
TGGTGCAAGGGGCCGGAGCGGAGTCGCGACGGCCACCGGCAGCGGGAGGA
GAACCCACCGGGTCGGCGGCGATGGCAGCGGCATTCTGTCCGCGTCCGTT
GAAGCCGGCGGCGGCGGCGGCGGTTCGTCGGATTCAAATGAACCGCCTAG
AGTGCTCGAGATGAGGCCGCTGCACCACGGGGGAACCGCCGCCGCCGCCG
CTCGGCGAAGGAGGAGCGGGTACTCCAATGAAAGTGGCAGGTCGACGCCA
GGACGGAGCAAAAGTAGTCATCATCGTCCGGGCGCCGCCGCTGCTTTCGC
GGGACCGGATGGAATGGACGGCGGCTTTGCGGACCCGGGCACATTCCGAT
GGGATGCGACCGTCGCCGACGCCGCCACTGCTCAGGGGGAGGACGGTTCG
GAGGGCGATGATGAGGAGGAAGAGGAAGAGGAGGAGGAGGGGGGGGGAGG
GGTCAGCAGGAGGGACGGGAGGGTGGGTGGCACGGGTGGCAGGAGGCGAG
GCAAGGGCGTAAGACGGAGCAGCAGCGGCAAGCTTGCGGCGGTAAACCCT
TCGAGGTCGGGGGGGGGGGACATGATCGACATTGCGCTTGCTGCAAGGCA
CCAGAGCGTGTGGTACATCATCACGCCTGAGTCGAAGACGCACCAGATTT
TCGACCATATCGGCGACTTCTTGACGATGTACGTGGTGGTGGCGATACCG
CTCTTCGTCTCGTTCCAGCACATCGAAAACATGCACGCGGCGACTTCTTG
ACGATGTACGTGGTGGTGGCGATACCGCTCTTCGTCTCGTTCCAGCACAT
CGAAAACATGCACGCGGAGGACTGGCACGCCTTCAACTTCGTGGTGGACG
TGTGCTTCCTGGTGGACCTCGCGGCGCGGTTCCTGACTGCGTACCACGAC
GAGTACGCCAACAGGGTGGTCTACGAGCCCATCGCGATCGCGCGGAACTA
CTCCCGCGGGCTGCTCGTGTTCGACCTCATCGCCTCTGTCCCGCTGACCA
TCGAGGACTGGCACGCCTTCAACTTCGTGGTGGACGTGTGCTTCCTGGTG
GACCTCGCGGCGCGGTTCCTGACTGCGTACCACGACGAGTACGCCAACAG
GGTGGTCTACGAGCCCATCGCGATCGCGCGGAACTACTCCCGCGGGCTGC
TCGTGTTCGACCTCATCGCCTCTGTCCCGCTGACCATCATGCTGGGCGTG
CACACGTTCAGCATCTCCAACAAGGTGACAAGGCTGGCCAGGATGCCCCA
GACCCTGAGGTTGATTCGGTCTATCAAGATGCTCAGCGAGGAGGCGGAGA
AGACCAACCGAAAGAACATTCTTCTCGCCATGTACAACTTGGTAAAGATG
CTGGGCGTGCACACGTTCAGCATCTCCAACAAGGTGACAAGGCTGGCCAG
GATGCCCCAGACCCTGAGGTTGATTCGGTCTATCAAGATGCTCAGCGAGG
AGGCGGAGAAGACCAACCGAAAGAACATTCTTCTCGCCATGTACAACTTG
GTAAAGGTTGTCCTCTACATCCTTCTGGTGATGCACTGGGTGGCGTGCGG
CTGGCACCTCCTGGCGGACATGGAGGACGCTGACCTGTCATGGTTGTCCT
CTACATCCTTCTGGTGATGCACTGGGTGGCGTGCGGCTGGCACCTCCTGG
CGGACATGGAGGACGCTGACCTGTCATGGATCGTGAAAGACGGCCTGGAA
GACGCGCCGGCCTCCACGCTCTACGTGACCTCGGTGTACTGGACCGTGAC
CACGCTGTCCACTGTCGGCTACGGCGACATCTTCGCGAGCACGATCGCCG
AGAGGACATACTGCATCCTCGATCGTGAAAGACGGCCTGGAAGACGCGCC
GGCCTCCACGCTCTACGTGACCTCGGTGTACTGGACCGTGACCACGCTGT
CCACTGTCGGCTACGGCGACATCTTCGCGAGCACGATCGCCGAGAGGACA
TACTGCATCCTCGTGATGTTGACGGGGGCCACGATGTATGCCCTCGCGAT
CGGTGCCGTGAGCCACATCATCACCACCGTGGTCGCCAGGCACTCGCAGT
CGAGGCGCATAGAGCGGCACGCGGAGGCGTTCATCCGCATGCACTCGCTC
CCGCAGTACTTAGCCTCCGAGGTGATGTTGACGGGGGCCACGATGTATGC
CCTCGCGATCGGTGCCGTGAGCCACATCATCACCACCGTGGTCGCCAGGC
ACTCGCAGTCGAGGCGCATAGAGCGGCACGCGGAGGCGTTCATCCGCATG
CACTCGCTCCCGCAGTACTTAGCCTCCGAGATCATGCGCACGCTCAACAT
CTCCGGGGAGACGCACCAGATGCTGGAAAAGAAGGCTCAAAACACTCTCG
AGCTGCTGCCCTCGAGCGTTCGCACCTCCACGCTTCTGTGCATCTACCGA
CGACAGATCATGCGCACGCTCAACATCTCCGGGGAGACGCACCAGATGCT
GGAAAAGAAGGCTCAAAACACTCTCGAGCTGCTGCCCTCGAGCGTTCGCA
CCTCCACGCTTCTGTGCATCTACCGACGACAGATCGCGAGGATAAAGTTC
TTCAAGGATCGGAAGGATGTCTGCCCGGTGTTCGTGACGTCCGTCATGCG
ATCCATGCACGACCACATTTACCCCAAGATCGCGAGGATAAAGTTCTTCA
AGGATCGGAAGGATGTCTGCCCGGTGTTCGTGACGTCCGTCATGCGATCC
ATGCACGACCACATTTACCCCAAGGCTGGGGAGCGCGTCTTGCTCGAGGA
AGGCGTTTCGGATGAGACCATCTTCGTCGTGCGCGGGCGGGCGACGGTCA
CTCGCCGAGGCGTGGAGGCTGGGGAGCGCGTCTTGCTCGAGGAAGGCGTT
TCGGATGAGACCATCTTCGTCGTGCGCGGGCGGGCGACGGTCACTCGCCG
AGGCGTGGAGGTTGGAAGGCTGAACGCCGGGTCGTGCTTTGGGGCGACGG
CGGCGCTTCACGGGGGTGGTGTTCGCAGAGAATCGGTTACGTGCGTGACG
GACTGCGAGATGTACACCATCGAGGGGAAAGCGCTAAGACGGATCGCGAG
GTTGGAAGGCTGAACGCCGGGTCGTGCTTTGGGGCGACGGCGGCGCTTCA
CGGGGGTGGTGTTCGCAGAGAATCGGTTACGTGCGTGACGGACTGCGAGA
TGTACACCATCGAGGGGAAAGCGCTAAGACGGATCGCGAGGGCATTTCCG
GGGCCCATGTCCGACCTCAAGGCCGAGTCGGAGCGGCCGCTGCTGTTGCT
GACCACCGGGGAGCGTAGAGGGAGCACCGGCGACACGGCTTCTGACTCCG
CTCCGGAGGGCATTTCCGGGGCCCATGTCCGACCTCAAGGCCGAGTCGGA
GCGGCCGCTGCTGTTGCTGACCACCGGGGAGCGTAGAGGGAGCACCGGCG
ACACGGCTTCTGACTCCGCTCCGGAGATTCGAAGGCGTCGGAGTGACGTT
TCCGCTGGCGGGTCTTTGGCGTCTCTCCACAAGGCGGCGGCCGGCGACAA
GCAAGCGCTACAATCGGGGAACATTGTTCAGCCTACCGTGGATATTCGAA
GGCGTCGGAGTGACGTTTCCGCTGGCGGGTCTTTGGCGTCTCTCCACAAG
GCGGCGGCCGGCGACAAGCAAGCGCTACAATCGGGGAACATTGTTCAGCC
TACCGTGGATGCCAACCGAAGCCTAGCGAGATGCCTCGCGGAAGCAAGCC
GGGCGGAGGAGGAGGCGTGGGACCGACTGCAGCTCCTCACCGACAGCCTG
AGGACCTTGCGTGGCTGCCTCGGCGATAGTAGCCGAGAGCTCCAACGCCA
GGCCAACCGAAGCCTAGCGAGATGCCTCGCGGAAGCAAGCCGGGCGGAGG
AGGAGGCGTGGGACCGACTGCAGCTCCTCACCGACAGCCTGAGGACCTTG
CGTGGCTGCCTCGGCGATAGTAGCCGAGAGCTCCAACGCCAGCAGATCCC
AGACGTGTCTCACGCCGGTCGCGACGAGTTGTCGAGCGGGGCTGACACCT
CGGGCGGGTTGCGGTTGGGCGATGTCAGCCTCCTACCCTCTTCGTCGAGC
GACCCCAAAGTGTACTGTAGTTCTCCGCTCTCCCGAGGGTTGAATTGACA
GATCCCAGACGTGTCTCACGCCGGTCGCGACGAGTTGTCGAGCGGGGCTG
ACACCTCGGGCGGGTTGCGGTTGGGCGATGTCAGCCTCCTACCCTCTTCG
TCGAGCGACCCCAAAGTGTACTGTAGTTCTCCGCTCTCCCGAGGGTTGAA
TTGA
back to top