mRNA_E-siliculosus-1a_F_contig1143.945.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI) HSP 1 Score: 770 bits (1988), Expect = 2.940e-274 Identity = 476/510 (93.33%), Postives = 478/510 (93.73%), Query Frame = 3
Query: 60 MAVAKQQKHAPMPAPASASTVGATTSAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAVGRGTSGSVMGGWMDGDSGGDVGGLAXXXXXXXXXXXXXXETVESEEAWLSSLGKQVAGTDSKSRWPSAIAAAAKHAKASKSPRKTPANAPDPRSFFANLLATGSGAGSPP 1586
MAVAKQQKHA PAPASASTVGATT+AATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSAS NNPSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVE+WTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGG GLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKD VNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAVGRG SGS MGGWMDGDSGG XXXXXXXXXXXXXXETVESEEAWLSSLGKQVAGTDSKSRWPSAIAAAAKHAKASKSPRK PANAPDPRSFFANLLATGSGAGSPP
Sbjct: 1 MAVAKQQKHA--PAPASASTVGATTAAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDSVNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAVGRGASGSGMGGWMDGDSGGXXXXXXXXXXXXXXXXXXXXETVESEEAWLSSLGKQVAGTDSKSRWPSAIAAAAKHAKASKSPRKAPANAPDPRSFFANLLATGSGAGSPP 508
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A7S3XSQ8_HETAK (Dynein light intermediate chain (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ8_HETAK) HSP 1 Score: 197 bits (500), Expect = 8.810e-54 Identity = 118/371 (31.81%), Postives = 178/371 (47.98%), Query Frame = 3
Query: 150 NLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQ------TSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPP 1244
N+WE +L +A ++RLP + LV VG GK +LL G S + + + PVL Y+++DA D ERD++P R+S WS + FE LL E+L + + + +DLS+PW++M ++E+W +E+ + + QLSVG QD+L + + + + + SS ++RNLGVP++V+GCK D++++ETFE QQ+L FIQQ LR+FC +YGAAL + SA+ G N L YLL +P F +D FIP+GWD+ +LI+ L KT W P+A F V+ PP
Sbjct: 12 NIWEHLLAEASSKTRLPDAQLVVVGDPQSGKKTLLKKLCSGSSDGS---------------------------------------EVLETSLLDDSSNGPSDEDGQPVLFYSFMDAVDLTANEFERDDTPARISTWSLGDVSFENLLSIPFTAEKLKHTMIAITLDLSKPWDLMRNLEKWVKVLERAIVKVRSQLSVGDQDELMQIQNDYIASQTE--------VENSS------------KIQRNLGVPLMVIGCKLDAIEAETFEHQQKLQFIQQHLRKFCYQYGAALCFASARAGTNLGRLRGYLLHRAHPGHFPGGXXXXXXXAQVANDELFIPSGWDTMKLIEDLEQA-KTSWAPDAAFETVITPP 322
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A835Z2Q1_9STRA (Dynein light intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q1_9STRA) HSP 1 Score: 156 bits (395), Expect = 5.920e-38 Identity = 120/399 (30.08%), Postives = 168/399 (42.11%), Query Frame = 3
Query: 120 VGATTSAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQ---GAERDESPPRVSVWSCSGLEFEPLLETVLRPEE------------LPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSL---QSET---FEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGA 1253
V A+TS W+ +LR+A R P S ++ VGP+G GK++L++ A+ +G FHPVL+Y Y +A D A Q G+ +SPPRVSVWSCS F +L V + P +A+V AVDL+RPWE + + E W A+E G + D R+ VVVGCK D+ + E+ E+Q+R F+Q+ LRR CL+ GAALVY SA+ G NC+ L R +L +YP AFS + + Q S A +IP GWDS L+D L+ W + +A+V+ PP GA
Sbjct: 4 VEASTSDTAGGSWDALLREAATAERPPDSVIICVGPRGSGKTALVERLT----GAAPRKQDATGEEPPPD--------------------------------------------FHPVLAYDYFEARDAAAQSSSGSAFSDSPPRVSVWSCSDARFVDILTAVTASTQHAPPPPAAAGVAAPALALV-AVDLTRPWEAVPAAEAWLAALE------------GVRGDARA----------------------------------------------VVVGCKLDAAGGAERESGGGMERQRRELFVQRRLRRLCLERGAALVYASARTGDNCAALQRLVLHRLYPSAFSCAPDAQVSGAVYIPWGWDSLELVDALMGGGVAGWSDDLPYAKVLPPPQGA 295
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A421FAE9_9STRA (Dynein light intermediate chain n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAE9_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.020e-37 Identity = 108/372 (29.03%), Postives = 177/372 (47.58%), Query Frame = 3
Query: 147 ANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPA--EQGAERDESP-PRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKER-LRGKAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSD--AAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPP 1244
A+LW+ MLRD RS+LP++ L+ VG GKS+LL E + S + A +L+Y +D DP E G + E + WS + L + L++ ++P+ L V + +D+SRPW + S+EQW +A+E + + QLS A+++L +A+K+ L + + +S N+ + +GVL +NLGVP+V+V KAD E ++ +I+ +LR+F ++YGA++V+TSAK G N + L +Y+L YP F F+E Q D + FIP+G+DS L++ L + W + F ++V P
Sbjct: 7 ADLWQQMLRDCSVRSKLPTANLLVVGDAESGKSALLSRLDETKLGVS------------------------------------------------EAAEAADAHAVDTLLAYTTVDVLDPRAKESGGDASEDVMAHIGTWSLNDLSLKDLIKIAVKPQNLQKTVVAIVLDMSRPWTIKSSLEQWLSALEGQLLEQINQLSPEARNELYAAIKQHILTYEDPSVDHSAPTPMDTSTNEF----MEEGVLSKNLGVPLVIVVAKADLRP----ENSVKMDYIEYTLRQFAIRYGASVVFTSAKSGTNVNALRKYILHRAYPTQFKFTEAPQLVDHNSIFIPSGYDSFELVNQSLVGSQARWPIDKPFEKIVPAP 322
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A3M6VKG5_9STRA (Dynein light intermediate chain n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKG5_9STRA) HSP 1 Score: 151 bits (381), Expect = 4.070e-36 Identity = 108/371 (29.11%), Postives = 173/371 (46.63%), Query Frame = 3
Query: 150 NLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQ-GSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAE--RDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKER-LRGKAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSD--AAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPP 1244
NLW+ MLRD RS+LP L+ VG CGKS+LL E + G + N + +L++ LD DP + AE R + + WS + L E L++ ++P+ L V + +DLSRPW + S+EQW +A+E + + QL +++L +++K+ L + + +S N+ L +GVL +N+GVP+V++ KAD E ++ +I+ +LR+F L+YGA++V+TSAK G N L +Y+L Y F F+E Q D + FIP+G+DS LI+ L + W + F ++V P
Sbjct: 6 NLWQQMLRDCSVRSKLPVVNLLLVGDAECGKSALLSRLDEAKRGPSQTTNET---------------------------------------------------HTVDTILAFKTLDVLDPHVKRAEMMRQDVMAHICTWSLNDLTLEDLIKIAIKPQTLQTTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLPSEERNELYASLKQHILTYEDPSVDHSAPVPMDTSTNEF----LAEGVLSKNIGVPLVIIVAKADLRP----ENSVKMDYIEYTLRQFALRYGASVVFTSAKTGSNVDTLRKYILHRAYSCQFKFTEPPQLVDRTSIFIPSGYDSFELINQSLVGSQARWPIDKPFEKIVTAP 317
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A6A4FS02_9STRA (Dynein light intermediate chain n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FS02_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.790e-35 Identity = 104/368 (28.26%), Postives = 175/368 (47.55%), Query Frame = 3
Query: 150 NLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRG-KAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSD--AAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPP 1244
+LW+ MLRD RS+LP++ L+ VG GKS+LL E + + S +A +L++ LD DP + E ++ + WS + L + L++ ++P+ L V + +DLSRPW + S+EQW +A+E + + QL+ A+++L +A+K+ + + + +S N+ + +GVL +NLGVP+V+V KAD E ++ +I+ +LR+F ++YGA++V+TSAK G N L +Y+L YP F F E Q D + FIP+G+DS L++ L + W + F ++V P
Sbjct: 6 DLWQQMLRDCSVRSKLPAANLLVVGDAESGKSALLARLDEAKLAPSEAADE--------------------------------------------------ARAVDTLLAFKTLDVLDP--RAKESEDVMAHIGTWSLNDLNLKDLIKIAVKPQTLQKTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLTPEARNELYTAIKQHILAYEDPSVDHSEPTPMDTSTNEF----MEEGVLSKNLGVPLVIVVAKADL----RLENSVKMDYIEYTLRQFAIRYGASVVFTSAKTGSNVDTLRKYILYRAYPSQFKFIEPPQLVDHNSLFIPSGYDSFDLVNQSLVGSQARWPTDKPFEKIVSAP 313
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A7S2V3Z7_9STRA (Dynein light intermediate chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z7_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.410e-34 Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 3
Query: 876 LERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTS-DAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVV 1235
L NLGVP++V+GCKAD L+SETFEQQQRL FIQQ LR CL YGA L+Y S+ G N +LLHRYLL +YPD FS +E + + D+ FIP+GWDS LI+ L K+PW +AT+ +V+
Sbjct: 47 LTNNLGVPILVIGCKADKLESETFEQQQRLQFIQQHLRNCCLPYGAGLLYCSSHGGTNMNLLHRYLLHRLYPDMFSLKDEAKVANDSVFIPSGWDSPSLIEDLKQA-KSPWEADATYDQVI 166
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: M4BRF2_HYAAE (Dynein light intermediate chain n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRF2_HYAAE) HSP 1 Score: 146 bits (369), Expect = 1.610e-34 Identity = 110/370 (29.73%), Postives = 177/370 (47.84%), Query Frame = 3
Query: 156 WETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADP-AEQGAERDESPP---RVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRG-KAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSD--AAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPP 1244
W+ MLRD R +LP+ +L+ VG GKS+L+ E +G S +GS A +L++ LD DP A++ E ES V WS + L + L++ V++P+ L V V +DLSRPW + S+EQW +A+E + + QL+ A+++L +A+K+ + + I D + + + +GVL +NLGVP++ V KAD L+ E Q + +I+ +LRR ++YGA++V+TSAK G N L +Y+L +P F F+E Q D FIP+G+DS L++ L+ + W + F ++V P
Sbjct: 9 WQQMLRDCSVRCKLPTVSLLLVGDTESGKSALVARLDEAKGGHS--EAAGS------------------------------------------------PPAVDSLLAFQTLDVLDPRAKESGESQESDDVIAHVETWSLNDLSLKDLIKMVVKPQTLYKTVVAVVLDLSRPWTIKSSLEQWLSALEGQLLDQINQLTSEARNELYAAIKQHILAYEDPSI----DHSVPTPMDTSASEFMEEGVLSKNLGVPLIFVVAKAD-LRPENSVQ---MDYIEYTLRRVAVRYGASVVFTSAKTGSNVDTLRKYILHRAHPSQFKFTEPPQLVDHNTIFIPSGYDSFELVENSLAGSQARWPTDKPFEKIVPAP 320
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: F0VZ01_9STRA (Dynein light intermediate chain n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ01_9STRA) HSP 1 Score: 145 bits (365), Expect = 7.660e-34 Identity = 110/376 (29.26%), Postives = 176/376 (46.81%), Query Frame = 3
Query: 141 ATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGGGDR------MGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSD--AAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPP 1244
A AN W+ MLRD+ RS++PS + VG G GK SLL + A+++N +P+ Q + +A + +D E DES ++ WS + L+ LL+ L+ L V VDLS PW + S+E+WT+A+E + + Q+ + L ++K L E G GG M SS N+ L +G+L++NLG+P V++ K+D L+ E+ Q + +++ S+R F ++YGAA+ YTSAK N +LL +Y+L P FS++E Q + A F+P+G+DS LI+ L + W P+ F +++ P
Sbjct: 4 ANANQWQQMLRDSSVRSKIPSVNFIIVGDPGTGKESLLAR-MSASNRANLSNSEN--------------------------WNPTKQNELLSSYSDNQASNPL--QKSDALFKFAAIPISD-KHVAVEADESIAMINAWSLNDLDLHELLQIALQSSTLEFSVAAVTVDLSSPWSMQKSIEKWTSALEGAILQQMSQIDPQKRSSLYQSIKNHLLDYG-EPGMGGQPSDTRGPMDSSSRNEF----LEEGILDKNLGIPFVIIVTKSD-LRPESSLQ---VDYLEYSIRMFAIRYGAAVFYTSAKTESNIALLQKYILHRACPAQFSYNEAPQLIERGAIFLPSGYDSVSLINQSLVGSQPRWQPDTPFEKIIPDP 340
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Match: A0A2D4BES1_PYTIN (Homoserine O-acetyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BES1_PYTIN) HSP 1 Score: 149 bits (376), Expect = 8.900e-34 Identity = 119/403 (29.53%), Postives = 173/403 (42.93%), Query Frame = 3
Query: 150 NLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASINNPSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADP-AEQGAERDESPP-----RVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEQWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLR------------------GKAKEIGGGGDRMGGSSGNDPPGGGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCSLLHRYLLSCVYPDAFSFSEEGQTSD--AAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAV---GRGTS 1271
NLW+ +LRD+ RS+LP + V VG CGK++LL E + + +PS +AG+ +LSY+ L DP A++G +V+ W+ S L L+ L+P L V V VDLSRPW + +S+EQWT+A+E + + QL + L VK+ L KE L +G L +NLGVP++++ K+D L+ E + + F+ LR+F +KYGAA+VYTSAK G N LL YL+ P F F Q D A F+PAG+DS L++ L + W + F ++V PP + RGTS
Sbjct: 468 NLWQQLLRDSSVRSKLPVAQXVVVGDHECGKTALLSRLNELPAKSPLLSPS---------------------------------LQPLNGPETTDGARSMAGE----LLSYSSLHVLDPKAKEGGNSSSDAAEDVIAQVNAWALSDLSLVDLMGIALKPSTLSQTIVAVVVDLSRPWAIKNSIEQWTSALEGQLLKQINQLPTELKTQLYQNVKQHLLEYEDPSLESSLPKAPMELSNKKEF-------------------LEEGTLAKNLGVPLIIIVSKSD-LRPENSVKMDYIEFV---LRQFAIKYGAAIVYTSAKTGTNIDLLRTYLVHRALPAQFKFDTPPQLVDRGAIFVPAGYDSIALVNQSLVGAQPKWPADKPFEKIVPTPPDELDDSSRGTS 810 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1143.945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1143.945.1 >prot_E-siliculosus-1a_F_contig1143.945.1 ID=prot_E-siliculosus-1a_F_contig1143.945.1|Name=mRNA_E-siliculosus-1a_F_contig1143.945.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=517bp MAVAKQQKHAPMPAPASASTVGATTSAATANLWETMLRDAMRRSRLPSSTback to top mRNA from alignment at E-siliculosus-1a_F_contig1143:25521..30619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1143.945.1 ID=mRNA_E-siliculosus-1a_F_contig1143.945.1|Name=mRNA_E-siliculosus-1a_F_contig1143.945.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5099bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1143:25521..30619+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1143:25521..30619+ >mRNA_E-siliculosus-1a_F_contig1143.945.1 ID=mRNA_E-siliculosus-1a_F_contig1143.945.1|Name=mRNA_E-siliculosus-1a_F_contig1143.945.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3102bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1143:25521..30619+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |