mRNA_E-siliculosus-1a_F_contig1142.939.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1142.939.1
Unique NamemRNA_E-siliculosus-1a_F_contig1142.939.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: D8LC95_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI)

HSP 1 Score: 753 bits (1943), Expect = 7.350e-265
Identity = 403/407 (99.02%), Postives = 407/407 (100.00%), Query Frame = 1
Query:    1 MAKALLIIGTLCSFANVGAFVPTCPRIASPSACARPSSAGIMSRASALADNRVRMQQQLPTTPAGGRAARTELFSTPAASGDKDAAPSPASAVEKEAKAAPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK 1221
            MAKALLIIGTLCSFA+VGAFVPTCPRIASPSACARPSSAGIMSRASALADNRVRMQQ+LPTTPAGGRAARTELFSTPAASGDKDAAPSPASAVEKEAKA+PSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSL+PIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK
Sbjct:    2 MAKALLIIGTLCSFASVGAFVPTCPRIASPSACARPSSAGIMSRASALADNRVRMQQELPTTPAGGRAARTELFSTPAASGDKDAAPSPASAVEKEAKASPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK 408          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A7R9YBK2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK2_9STRA)

HSP 1 Score: 375 bits (962), Expect = 5.680e-118
Identity = 202/326 (61.96%), Postives = 250/326 (76.69%), Query Frame = 1
Query:  244 DKDAAPSPASAVEKEAKAAPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK 1221
            D   A SP+S+  K+       +KV   F LWY+ NIGYNIYNK+VLN LP+P+ MA+ QL  GLL   PLW++ +RKAPKL+   L  L  LA+LHT AH+TAVLSLGAGAVSFTHIVKAAEP F+A F+A L+GQ FAAPVYL+L+P+IAGV++AS+KEL+FSWV+FGNAMGSNT SALRGI  KK MG P GENM+ ANLYAVLT      L+P+AL++EG K   AW AA+AA  + + L    LLSGL+YY YNEVAFLAL  V+P+THAVGNTIKRVV+I+A+ I F T MTP +IAGS++A+ GTL+Y+L K +Y+KKK
Sbjct:   65 DTTPAASPSSSTLKQT------LKVGGAFALWYILNIGYNIYNKKVLNALPLPYTMAAVQLAAGLLIFVPLWVSGIRKAPKLSRENLKNLFPLASLHTGAHLTAVLSLGAGAVSFTHIVKAAEPAFSALFAAVLMGQVFAAPVYLTLIPVIAGVAVASMKELAFSWVSFGNAMGSNTFSALRGIYAKKNMGNPQGENMNSANLYAVLTCFGIALLTPIALILEGGKMGAAWTAAVAAYGSQQLLLWHALLSGLYYYSYNEVAFLALSQVHPITHAVGNTIKRVVVIIASVIVFGTTMTPTAIAGSSVAILGTLMYALAKNYYQKKK 384          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A6U4KWF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KWF3_9STRA)

HSP 1 Score: 372 bits (956), Expect = 6.070e-117
Identity = 207/344 (60.17%), Postives = 251/344 (72.97%), Query Frame = 1
Query:  199 RAARTELFSTPAASGDKDAAPSPASA---VEKEAKAAPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK 1221
            ++A  E  S PA    K+   +PA+     +K+AK   +M+KV  YF LWY+ NIGYNIYNK+VLN  P+PW MA  QL  GLL   PLW T LRKAPKL+   +  L  LA++HT AH TAVLSLGAGAVSFTHIVKAAEP F+A F+A  LGQ FAAPVY +L+P+I GV++AS+KELSFSW++FGNAMGSNT SALRGI  KK MG PVGENM+ ANLYAVLT +    L P+ALL EG K   +W A +AA      L+  +L SGLFYYLYNEVAFLAL  VNPVTHAVGNTIKRVV+I+A+ + F T MTP ++AGST+A+AGTL Y+L K  +  K+
Sbjct:   49 KSALEESGSEPAPVPAKEVEEAPAAVDAEADKKAKLI-NMLKVGGYFALWYILNIGYNIYNKKVLNAFPLPWTMALMQLAAGLLVFVPLWATGLRKAPKLSIPNVKTLLPLASMHTAAHATAVLSLGAGAVSFTHIVKAAEPAFSALFAALFLGQVFAAPVYAALVPVIGGVAVASMKELSFSWMSFGNAMGSNTFSALRGIFAKKNMGNPVGENMNAANLYAVLTCMGIGLLFPIALLTEGSKWAASWAAGVAAYGGKALLAKHMLFSGLFYYLYNEVAFLALSKVNPVTHAVGNTIKRVVVILASVVVFGTQMTPTAVAGSTVAIAGTLGYALAKNAFPNKE 391          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A8J6C741_DIALT (TPT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT)

HSP 1 Score: 348 bits (894), Expect = 3.460e-108
Identity = 183/299 (61.20%), Postives = 222/299 (74.25%), Query Frame = 1
Query:  310 VKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAH 1206
            +KV   FG+WY FNI YNI NK++LN LP PW MA  QLG+GLLY+ PLW++ LRKAPKL+   +  L  +A +H + H+  V+SLGAGAVSFTHIVKAAEP F+   SA      F  PVYL+L+P++ GV +ASL ELSFSWVAF NAMGSNTA +LR I  KK M KP GENM  ANLY VLT+++F  L P AL++EG K K  W AAIAAG TA  L  T L+SGLFYYLYNEVAFL LD+V+P+THAVGNTIKRVVII+A+ + F T MTPL+  GS++A+ G LLYSL K +
Sbjct:   70 LKVGFLFGVWYAFNIVYNISNKKILNALPFPWTMAVVQLGVGLLYLLPLWMSPLRKAPKLSSENIKALMPIALMHGIGHLCTVISLGAGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLAKQY 368          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA)

HSP 1 Score: 348 bits (893), Expect = 1.530e-107
Identity = 183/303 (60.40%), Postives = 234/303 (77.23%), Query Frame = 1
Query:  310 VKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKK 1218
            +KV ++F LWYLFNIGYNIYNK+ LN+LP+PW++   QL +GLLYVFPLWL  +RKAPKL+   +  +  +AA+H +AH+TAV+SLGAGAVSFTHI+KAAEP FT+ FSA  L Q F+  VY SL+P++ GV++ASL E  FSW+AF +AM +NTASA RGI  KK M +P G+NM PANLYAVLT+LA   ++PVA LVEG K KPAW+AA+A   + + L + I+ SGL++YLYNEVAFLALDSV+PVTHAVGNTIKRVVII A+ + F+ P+T     GS +A+AG LLYSL     +K+
Sbjct:  103 LKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAV-TSQRQLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPITLQGYIGSAVAIAGVLLYSLAVERTKKR 404          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A7S1XYR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYR7_9STRA)

HSP 1 Score: 343 bits (881), Expect = 3.180e-106
Identity = 181/302 (59.93%), Postives = 231/302 (76.49%), Query Frame = 1
Query:  310 VKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKL--RKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHY 1209
            +K+  YF LWY FN+ YN+ NK+VLN LP+PW +++AQLGIGLLYVFP+WL KL  RKAP L    +  L  +A  HT  H+  V+SL AG+VSFTHIVKAAEP F+   SA  L   F  PVYL+L+PI+ GV++ASLKELSF+WV+F NAM SNTA ++R I  KKQM  P+GENMS  NLYAVLT+++F  L+P+A ++EGRK  PAWD+A++AG  +  L+  IL+SGL YYLYNEVAFLAL++V+P+THAVGNTIKRVVIIVA+ I F+T M+  SI GS+IA+ G LLYSL K ++
Sbjct:   72 LKIGVYFFLWYAFNVVYNLTNKQVLNALPLPWTISAAQLGIGLLYVFPVWLLKLGGRKAPVLTMENVKTLMPIATCHTTGHLCTVISLSAGSVSFTHIVKAAEPFFSTVMSAVFLKSFFKLPVYLTLIPIVVGVAMASLKELSFTWVSFLNAMASNTAFSMRAIFSKKQMNAPMGENMSAPNLYAVLTIMSFLGLAPLAGVIEGRKIGPAWDSALSAGLESSELTKKILMSGLSYYLYNEVAFLALNAVHPITHAVGNTIKRVVIIVASVIFFKTKMSMQSIIGSSIAIFGVLLYSLAKQYF 373          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A7S2SP14_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP14_9STRA)

HSP 1 Score: 338 bits (868), Expect = 3.100e-104
Identity = 185/302 (61.26%), Postives = 225/302 (74.50%), Query Frame = 1
Query:  310 VKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQM-GKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYE 1212
            +K+ +YF LWY FNIGYNI+NK+ LN L +PW +A  QL  G+ YV  LW++KLRKAPKL+   L  LS  A  H   HV AVLSLGAGAVSFTHIVKA+EPV +AG +A  L Q    PVYLSL+PII GV+LAS+ ELSF+W+AFG AM SN ASA R IL K  + GKP+GEN++P NLYAVLT+L+F  L P+AL  E    +  W+AA+A+G T K L+ TI  SG+ YYLYNEVAFLALDSV PVTHAVGNTIKRVVII+A+ + F T +TPL  AGS IA+AGTL+YSL K  ++
Sbjct:   79 LKIGSYFALWYAFNIGYNIFNKQALNALDLPWTLALVQLFAGIPYVAILWMSKLRKAPKLSRENLVNLSPSALCHLGTHVGAVLSLGAGAVSFTHIVKASEPVVSAGLTAIFLKQIMPLPVYLSLVPIIGGVALASVTELSFTWLAFGAAMMSNVASASRAILSKTVLSGKPMGENLTPQNLYAVLTILSFFMLLPMALAFEAGSIQSVWNAAVASGLTPKYLAQTIAASGILYYLYNEVAFLALDSVAPVTHAVGNTIKRVVIILASIVVFNTQLTPLGAAGSGIAIAGTLMYSLAKNKFK 380          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A835ZAU1_9STRA (Triosephosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU1_9STRA)

HSP 1 Score: 336 bits (861), Expect = 2.780e-103
Identity = 187/340 (55.00%), Postives = 239/340 (70.29%), Query Frame = 1
Query:  193 GGRAARTELFSTPAASGDKDAAPSPASAVEKEAKAAPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGAT-AKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHY 1209
            GG AAR  L   P         PS A+ V     +A    KV +YF LWY+ NI YNI+NK++LN +P+PW MA+AQLG GLLY+ P+WL +LR AP+L+   +  L+ + A HT  H+  V+SLGAGAVSFTHIVKAAEP+F+   SA +L  TF   VY++L+PI+AGV++AS+ EL+FSWV+F NAMGSNTA +LR I  K  M KP G+NM+P NLYAVLT++AF  + P+ LLVEG K + A++  IA     A    +     GL YYLYNEVAFLAL  V+P+THAVGNTIKRVVI++A+ IAF T M P+SIAGS +AV+GTLLYSL K+ Y
Sbjct:   38 GGAAARQPL---PRXXXXXXXGPSAATTVPAPQSSAAHTAKVGSYFALWYILNIAYNIFNKKMLNAVPLPWTMATAQLGTGLLYILPVWLLRLRAAPQLSLDNIKGLTGITACHTAGHIMTVISLGAGAVSFTHIVKAAEPLFSTLMSAIVLKSTFPWQVYMTLLPIVAGVAIASMTELTFSWVSFLNAMGSNTAFSLRAIFSKMAMNKPQGKNMTPPNLYAVLTIMAFIGVLPLTLLVEGSKIQSAFETGIAGYVGGANKFWTHFFACGLSYYLYNEVAFLALGQVHPITHAVGNTIKRVVILIASVIAFGTKMRPMSIAGSAMAVSGTLLYSLAKSKY 374          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: A0A7S4E311_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E311_9STRA)

HSP 1 Score: 335 bits (859), Expect = 3.490e-102
Identity = 183/301 (60.80%), Postives = 223/301 (74.09%), Query Frame = 1
Query:  310 VKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAK-PAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHY 1209
            +K  ++F LWYLFNIGYNIYNK+ LN+LPMPW +A+ QL  G+ YV  LW T  RK PKL    L  L  +A  H   H+ AV+SLGAGAVSFTHIVKA+EPV +A  SA +LG  ++   YL+L+PI+ GV+LASLKELSF+W+ FG AM SN +SALRGIL KK MG  VGENM+  NLYAV+T++AF  L PV+LLVE  KA   A + A+AAG + K L+    LSG +YYLYNEVAFLAL  VNPVTHAVGNTIKRVVII+A+ IAF TP++ L + GS+IA+ GTLLYSL K  Y
Sbjct:  132 LKTGSFFALWYLFNIGYNIYNKKALNVLPMPWTLATLQLFAGIPYVLLLWSTGARKTPKLTQDNLKTLFPVACGHLGTHIGAVISLGAGAVSFTHIVKASEPVVSAALSAVMLGAFYSPITYLTLLPIVGGVALASLKELSFTWLGFGAAMLSNVSSALRGILAKKTMGGGVGENMNETNLYAVMTIMAFAVLLPVSLLVETPKAVGAAINTAVAAGTSKKDLAILSALSGAYYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFNTPISRLGVIGSSIAITGTLLYSLAKNKY 432          
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Match: R1FIQ2_EMIHU (TPT domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FIQ2_EMIHU)

HSP 1 Score: 333 bits (853), Expect = 3.600e-102
Identity = 187/310 (60.32%), Postives = 225/310 (72.58%), Query Frame = 1
Query:  283 KEAKAAPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKA-KPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHY 1209
            KE+      +K  ++F LWYLFNIGYNIYNK+ LN LP+PW MA  QL +G+ Y   LW T LRKAPKL+   +  L  ++  H   H+ AV+SLGAGAVSFTHI+KA+EPV +A  S A+LG   +   YL+L+PI+ GV+LASLKELSF+WV F  AM SN +SA+RGIL KK MG  VGENMS ANLY VLT+LA   L PVAL +E   A + AW AA  AG TA  L+   LLSG FYYLYNEVAFLAL  VNPVTHAVGNTIKRVVIIVA+ IAF+TP++ L + GS+IA+AGTLLYSL K  +
Sbjct:   61 KESDGVFETLKTASFFALWYLFNIGYNIYNKKALNALPIPWTMALLQLFVGIPYCLFLWTTGLRKAPKLSADNVKTLIPVSLGHLGTHIGAVISLGAGAVSFTHIIKASEPVVSAALSFAILGAVSSWQTYLTLLPIVGGVALASLKELSFTWVGFIAAMVSNLSSAMRGILAKKTMGGGVGENMSEANLYGVLTILATIALFPVALAIEPPAAIRAAWTAATGAGMTAGYLAKMSLLSGAFYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIVASVIAFKTPISTLGVIGSSIAIAGTLLYSLAKNKF 370          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1142.939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC95_ECTSI7.350e-26599.02TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7R9YBK2_9STRA5.680e-11861.96Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4KWF3_9STRA6.070e-11760.17Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J6C741_DIALT3.460e-10861.20TPT domain-containing protein n=2 Tax=Diacronema l... [more]
A0A4D9DFS8_9STRA1.530e-10760.40TPT domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S1XYR7_9STRA3.180e-10659.93Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SP14_9STRA3.100e-10461.26Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZAU1_9STRA2.780e-10355.00Triosephosphate/phosphate translocator n=1 Tax=Tri... [more]
A0A7S4E311_9STRA3.490e-10260.80Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
R1FIQ2_EMIHU3.600e-10260.32TPT domain-containing protein n=1 Tax=Emiliania hu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1142contigE-siliculosus-1a_F_contig1142:20894..28538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1224
Model size2864
Exons4
Ec32 orthologEc-14_005600.1
Ec32 ortholog descriptionTriose-phosphate transporter domain
Hectar predicted targeting categorychloroplast
EggNOG OGsKOG1441@1,KOG1441@2759
EggNOG free text desc.carbohydrate transport
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
KEGG TC2.A.7.9
KEGG koko:K06643,ko:K15283,ko:K15285
Preferred nameSLC35E3
Seed eggNOG ortholog2880.D8LC95
Seed ortholog evalue6.3e-216
Seed ortholog score756.5
Taxonomic scopeEukaryota
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.Z
EC2.3.2.27
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1142.939.1prot_E-siliculosus-1a_F_contig1142.939.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1142 20894..26898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927657.2875535-CDS-E-siliculosus-1a_F_contig1142:20893..212491622927657.2875535-CDS-E-siliculosus-1a_F_contig1142:20893..21249Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 20894..21249 +
1696318626.8195543-CDS-E-siliculosus-1a_F_contig1142:20893..212491696318626.8195543-CDS-E-siliculosus-1a_F_contig1142:20893..21249Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 20894..21249 +
1622927657.320221-CDS-E-siliculosus-1a_F_contig1142:24834..249931622927657.320221-CDS-E-siliculosus-1a_F_contig1142:24834..24993Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 24835..24993 +
1696318626.831625-CDS-E-siliculosus-1a_F_contig1142:24834..249931696318626.831625-CDS-E-siliculosus-1a_F_contig1142:24834..24993Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 24835..24993 +
1622927657.33353-CDS-E-siliculosus-1a_F_contig1142:25729..262761622927657.33353-CDS-E-siliculosus-1a_F_contig1142:25729..26276Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 25730..26276 +
1696318626.8417513-CDS-E-siliculosus-1a_F_contig1142:25729..262761696318626.8417513-CDS-E-siliculosus-1a_F_contig1142:25729..26276Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 25730..26276 +
1622927657.3463626-CDS-E-siliculosus-1a_F_contig1142:26736..268981622927657.3463626-CDS-E-siliculosus-1a_F_contig1142:26736..26898Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 26737..26898 +
1696318626.8519475-CDS-E-siliculosus-1a_F_contig1142:26736..268981696318626.8519475-CDS-E-siliculosus-1a_F_contig1142:26736..26898Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 26737..26898 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927657.3584824-UTR-E-siliculosus-1a_F_contig1142:26898..285381622927657.3584824-UTR-E-siliculosus-1a_F_contig1142:26898..28538Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1142 26899..28538 +
1696318626.8614292-UTR-E-siliculosus-1a_F_contig1142:26898..285381696318626.8614292-UTR-E-siliculosus-1a_F_contig1142:26898..28538Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1142 26899..28538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1142.939.1

>prot_E-siliculosus-1a_F_contig1142.939.1 ID=prot_E-siliculosus-1a_F_contig1142.939.1|Name=mRNA_E-siliculosus-1a_F_contig1142.939.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=408bp
MAKALLIIGTLCSFANVGAFVPTCPRIASPSACARPSSAGIMSRASALAD
NRVRMQQQLPTTPAGGRAARTELFSTPAASGDKDAAPSPASAVEKEAKAA
PSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVF
PLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIV
KAAEPVFTAGFSAALLGQTFAAPVYLSLMPIIAGVSLASLKELSFSWVAF
GNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVA
LLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSV
NPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVK
AHYEKKK*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1142:20894..28538+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1142.939.1 ID=mRNA_E-siliculosus-1a_F_contig1142.939.1|Name=mRNA_E-siliculosus-1a_F_contig1142.939.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7645bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1142:20894..28538+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGAAGGCATTGTTGATAATCGGCACGCTATGCTCCTTCGCGAACGT AGGAGCCTTTGTGCCGACATGCCCTAGGATCGCTTCTCCCTCGGCATGCG CCAGGCCGAGCTCCGCGGGTATCATGAGCCGCGCGTCGGCGCTGGCGGAC AACAGGGTACGTATGCAGCAACAGCTGCCTACGACACCCGCTGGTGGCCG TGCCGCTCGCACTGAGCTGTTCTCGACTCCGGCGGCTAGTGGTGACAAGG ACGCCGCGCCATCGCCTGCCTCAGCCGTGGAGAAGGAGGCCAAGGCTGCT CCGTCTATGGTGAAGGTCACCGCGTACTTCGGTCTGTGGTACCTCTTCAA CATCGGGTACGACCAACCAATTGATTTTCAAATTCGTCGTCGGAGTTATT CACGAGACAGTCTGGATGCATCGGTGTTTAGAACGCTCTCTTTCGGTCGG ATCGAATCAGCCATGGCAGTCGTATTGGCTGCTCTACCACACCCATCTCT CTGCTCCTGAACCATCATGATGAGTCTTTTCGAGAGTTTTTCTCGTTTTT TCGGGTTGTCGAAGAATGCACATGATTCAATGACGTCATACATCTCATGA GCGTATTCCACCTCCAAGCCTCCGAAGTTGCTGGAAACTCGCACCAGAGT CGAAGATCAGATTCATTACCTTGCCTTCAACCCTTTCAGAGTGAATTGCT GACGATTATATGGTACAAACAACTCCTCTTCTACAGTAACTCTATATGTA GTCTAGCGTATGGCAGAAGAGCAACACCGCTGGTACGCGATGCATACAAT TCTAAACACGAACACAACACTGCCACAAGCATTACCAACACTAGACTACC GACAGACAGGACCGCGAAGTACGTTTATGGTTCGTACATTCATGTAGACT ATTTAGAGGTTTGCTCGTCAACAAATGCAGAGGCATCTCCGTTCTTAGGT TGATGCCACGTGGAGGAGTGTGATAAAACCGACCACCAGTGGAGGCATCA TTCCACTCGCGATATGTGACAAAGCGTAGCCGATCGTGTCGGTCAGGCTC CACGTATAGAGAAGTGCCCGAGCGGAGCGGTGTGTCCATCGTGGACGCCT GTCCTACAACTGCAGCAGTAACTCCCAAGGTCCTGCAAGTTGGTCCCAGC AGCTCAAGGAACATCTCGGAATATAAGTTTGGGTATACAATGTACATGGA CTATGCTTAGAATCTCTACACTACGAAGATATGCAAGATCCTGGCCCGCA ACATATCTACTTCGGAGGCTCTTTGTTGGCTTTAAAGTTTAGATCAACAT TTGCTGGTTGATCTGCCCGTTTGCGCTCAAAGTGTTGTTTCAAATTGCCG AGCGAGACAAAAATCCAATCTTCACACACCGGGCACTGTATCGATCGCCG TGAACAGGGGGACAGGGTGATATCGTTCATAAACGCTTATCCATTTGACT ACTCAGTCAGCGCTGACGGAATAGTCTAACAGATAAGCCTTAATATAATA AATGATAAACTCTCGGCTCGTAGCCTCCCAGCTTGATCAGCGTAGTACTG TAGGGATCTCCGGGGACGGACCCTCGCCAGGCGCTGCCGGTGGGTGGGCA AAGGCCCTCCGCACTCGGGAGCGCCTGGGGGCAACCTTCCTGCCTACCCC GTCACTCAACAGGGGTACGACTACAGCGCATACCCCCCTCACCCGTACCG CCCCCAGGGAAACGAGCCGCCGATACATGCCGCTGACCCACGCAGGGTGA CGGGGTAGGCAGGAAGGTTGCTGCCAGGCGCTCCCGGGTGAGGAGGGCCT TTGCCCCACCCACCGGAAGCGACGCCACGCCCCCCGAGTCTTCCTCCCGC CTGCTGCTGCTGCTGCTGCTACGTCCAGGTCCCCCTCCAACAAAGCCCCG GCCCCCACGCTGGGCCCCGTGCCTTCGGCCGTAGCTCACACCTCTGCCGC CCGATGGTACCCCCCAACCTCGCTGCAGACGACATTCCTCGTTTCTGTGA GACGATTGTGGAGGGTACAGAATTAAGTGGCGTGGTTGTCGGGCGGGTGC GGCGGCGGGCATACCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCG CTGCTGTCGCGCGGCCGTCCTCTCGTCTTCCCCTATCCCCCGTGTTCCCT CCTCCGCCACCACGGTTGTCACCGCCATTGACGAGGGCATACGCCCCCAC GCTCTGGCGCTTTCTTACTATTTAGCGATGATGACCGTTCTGTACCATAA GCAGCAGTATTACACCGATGGCGCTACAATTGATGGGGGCAAAGATCGCG CCTCTAGAATGCCGTGGAATGGAGTGTTCAAGGCAAGACGCAAGATAATC GAGAATCAATAAAGAGGCAGCGCGCGTGCATTGTAGATTTCATTGTTTTG CATATGAAACGAGCCGGCCGGCCTGGGGCCTGTATAATGTGTGTATGTGT GTGTGTTTGTTCGTCCCATATATTCTGGCGCCGGTGTACAGGCCTTTCGG TGTAATACACTTGATGTCTCAGCTGGGGTCACACAAGAGGAAGGCCACAC AGGAGCTTTTTTAGTTTTTTATTTTGTTTTATTGCCCCACGTTTCCCCCT GCGGTGCCTGCCTTGGTTTTTATCGCGAGGAGGGTTCAGCCATCCCTTTC CCTCGTCGACCGTGAAGCCGAAGTTTGTCTACTCACGACCTAGATCGCTT TCAACCACAGGTTGCTGGAAATAAATCCCGGGAAAAAAAACTCCGGAGAG GGAATCGATCGAACACACAACCTGCCGCTCGGGAGTCGTGCAGATTGACC ACTAGACCACACCAACCATCAGCGGTATCCACGATACCGACATCCAAGCG TGATTCATGCCCAACGCTCCCGATAGGTAGAAATACGACAAAAAAACGGT GATCTGTGCCTCGTCGGCTGTGAACGAGTGTGTCGTGGCCAACGTCTTCT TACATGGGTTTTAATGTTTTAGTGCGTTCCGACCAGCTATTTAGTCGCAT TCACTCAAAACTTTCAGCGGACAATGAAAGAGAGGCCGCGATGATCCTCG TGCACACGACAATTGATGGAGGTCGGATATGAAGTAAACACCAATTTTCA CCGCGGTTTCTTCTCTACTGGGGCATTCCGGTGCACCTTGCCTAACAACG TGACCTCTATCTAAACATATACTGTAAAAGCCATGAAGTGTTGTTGTGTT TCTGCATACTGGGAAGCTTGAAGGGAAAGCTCGCTTGCAAGAGCACCCTG ACCCTACGAGTTCAGTCGGCAAATTCTTCTTAGTCCATCGAAGAAGCTAA TCTACGCTCTACTCCACACGAGCTTTTCATGGTCCATGAGTTCCTTTCAG CTCGGCCGGCGCTCGTCGATTTCAGAGGACCTGCGGAAAGAACATCACAG AACGCCACAAAGTGTATATGTTCGCGACAATTCTCCGAGGAAATGTCTCT ATACAGTTGTTTTGTTTTTGGAGAGCGTCGCCCTTGGTTGGGCCTACATG AGACCACCTCCCATGCTATGCAAGCATCGACCGCTTTCCGTTGCACTCAC GGCGGATCCCAAGGAGGGCACAAAACAGGCAGCTCACCCTACGCAAAGAC ACAATTGTTGCTTGCCCGCGAAGCAGAAGAAGGCTTTTCTTTCTGGCAAT TCTCTCCTCGAGAGCGGCAAGAAGAACGTGGCTGTGCTGCTTGCGTTACC AGCTCCGATGAAGGGACAGCGAGCGGGTCTTTTCGCCGTGTACGGCAGTA CGTTGTCTTCTCCGTAGCTGCGCGCTCGTCATCGGAAGGGTGTTCCTCAA GAGAACGTGGTAGATGTGAAACCTCTAGTGCCGCGGATATGGTAACAGCG ACTGCCTCTTGATCCAACGAACACCTCTGAATAATGAAGGAGACACGAAG GAGGGAGAGTTCTCATGCTGATCTTCTCTCGCACGGAACAGGTACAACAT CTACAACAAGAGGGTTCTCAACATCCTCCCGATGCCCTGGTTGATGGCGA GCGCCCAGCTCGGGATCGGGTTGCTGTACGTGTTCCCGCTGTGGCTGACG AAGCTGCGCAAGGCCCCTAAGCTTGCCGACGGTGCCCTCGGACCGCTCAG GTATGTCGCGTGGTTGGTCTGCATGTTGCCTAGAAGTAGGCTGGCGCATG GGCTGCTGCTTGATATCGCCAGTGGTTTACTGCTGATTTTGCTGATTCTG CTGCTGGTCTTGGCTAACCTGCTTGTATGTACGAGAGAGATCCACGATAT TTCCCGCGAAACAAGAGGCGATAAGTACACTCCATGTCTTAGGTCGGTTG GACAGACACGCAACACACGATCTCTTCTCATGCGTCTTGTCTTGCGTTGG TCACGTGGTACGTTGCCATTCTGCATGTGTGGTCATTCTTAGCACGAGTG TGGAAAAAACACCCCGTGCTTCGTTCGTCGCCCGAAGTTCCCCGATGCAA CCATGCTGCCACGTACGGCTGGCTGCTGTACTCGTGAAAAGTACGGAAAT TGCTGTGAATTTGTTCCGTCGCCTCCGATACCACACCCATGCGTGTAGGA CATGCCTCGACAGCACACGATCTCATCGTGACTCCTACCTACTAATTGTG CTGCTACTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCGCCCGCCGCCCGCGCAG GCGCGCCCGCCGGCCGCNNNNNNNNNNCCCCCCCCCCCCCCCACCCCAGC GTTCCCCCCCCCTACCAACGTTCCCCCCCCCCCCCCCCCCCCCCCCCTCC CCCCCCCGCGGCTTCCACGTCGTCTCCGGAGAGCAGCCAGCTGGCGGCGC TGCACACGGTGGCGCACGTGACGGCGGTGCTCTCCCTGGGCGCCGGCGCG GTCTCCTTCACGCACATCGTCAAGGCTGCCGAGCCCGTCTTCACGGCAGG GTTCTCGGCCGCCCTCCTCGGGCAGACCTTCGCCGCCCCGGTCTACCTGT CCCTCATGCCCATCATCGCGGGAGTGTCCCTGGCGTCCCTCAAGGAGCTC TCCTTCTCCTGGGTGGCGTTCGGCAACGCCATGGGCTCCAACACGGCCTC CGCGCTGCGCGGCATCCTGGGCAAGAAGCAGATGGGCAAGCCGGTCGGGG AGAACATGAGCCCGGCCAACCTCTACGCCGTGCTGACCGTGCTCGCGTTC TGCTTCCTGTCGCCCGTGGCGCTGCTGGTGGAGGGCAGGAAGGCCAAGCC CGCGTGGGACGCGGCCATCGCGGCTGGCGCCACGGCGAAGGGCCTGTCGT CGACCATCCTGCTGTCCGGCCTCTTCTACTACCTCTACAACGAGGTCGCC TTCCTCGCCTTGGACTCCGTCAACCCCGTCACGGTGAGAGCGCGACCGGC CGGACATGGCGGTGGCTGCGGTTCATGGCTATCAGTAGATGGGGGGGGGG GGGGGTACGTATACTGCTTCGAGTGTGTTCCTTGATTTCGTTGCCCAATC CTGCGTGGGACGGAGGTCGCGGCCCCTTGCCGAGGGCACCAGTTCTGACC TCGTGTGCAAAGCGCGGCCAAGTGCCCGCACCATTGGTGTGTACCGTAAA CGAAAAACATACTGTTTTCATTTGAACGCCTTCGACACGAAGCTGCCTCT GTGGTCAAGAGCTGCTGCTGTTGTGCACGGGTCTATCGCTTCCCGTCGCA ATCGCCAATCTGCGGGCCCTCTTAACGCTTGCCGTGACCAGCGCGGTCTC TTTCAATTTTACATGCACTTCACCAGCGTACTAATCTCCCCCGCCCCCTT CCTCCGTCTCCGCTACGCGTGCTCTCTCTCTCCCGGCGCGCAGCACGCCG TGGGTAACACGATCAAGCGCGTGGTTATCATCGTGGCGGCGTGCATCGCG TTCCGCACGCCGATGACGCCGCTATCCATCGCCGGTTCGACTATCGCGGT GGCCGGCACGCTGCTGTACTCCCTGGTGAAGGCACACTACGAGAAGAAGA AGTAGATTTAGAGATGGAAAACCCGGACCCCCCCGGTTCCTCCTCCCCTG CGTGACTTCTTGGCGACGGGGTATACGCTAGAAAGGAGGGGAGTTTGAGG CCACACGCCTTGCGTTTTGCGCCCCTTCTCGGTGTGATCGAGAGGCACAA CTCGGGGAAGAAACCTGCGGAGATAATGCCCCTCGCGTTGCTGCTGTGGT ATCGTTGTGTTTATTCAAGGACCGGTTCATGTCACGTAGTTATAGAGACG AGGGGACCAGCACTTGTTTCAGGCCCGTTTTTAAGGCTCTGTGATTATCC GTCTGTAGCTCTTTGCAGACAGACAGGCTGAGCTGTGGGTGGGGTTGGGT GGTAGGGGGCTAAAGTTAGAAGATTGACCTGCACGGTGGTTCAGGGTGGC TTGCGATAATCAGTGCGAGTCGGGAGGGGGTAGAGCAATATTTAGGGGGA GGACGGCTATCCTTGCTGTCGTGTGGGAGGGGGGCTCTCGCGCTGGTCAC GCGGTACTAAATATAGAGACTGGCGCGTCTGGCGGGTGTGCGCCCTGTGT ACTGTGCTTGCACCAAGTGTGGCGACAATTGATGTGCACGTGTGGCCTCT CCCACTGCTCCCGTCATAGGTAGGGAGACCGGGGCCCTTTCGATATGGTT AGCATAGACTAGGTGTCCTTTTACGGTTTGGTGTATCGTTTGCAAGAGAC GACGCGTTATCCACCTCGTTCTGGCAGTTTTGTGGGTATCTTGTTCACAC GTGGCTCTTAGAGGAGCGAGGATGGCCAAATGCAGAAAAGCTGATGCAAT GGGACGTTGGTGCGGTGGTGACACAGAGCTAAAAAGGCTTCGTGGTGGTC TTGCATGGCGTGCTTTCGGATTAGCTCCTCGCTTGCACCACGGTAGCTAA AACCGTTCAGCTTGATTAAGGGGGGGGGCGTGAGCCAGCTGCGTTTTTGT TTCTCCCCGTTTTGTCCTGTCCGCGGGGAAGCGGCCGCGTGCCGCTGTTT TCCGCAGGCCTGATGTCTTGTTGCTGTCTCTGACTATGGCTTGCTTTGTT CGGGCTGCTCGTCACACGCGTGGCCAACAGCACTTGTCCTCTCCGTCAAT AGGCAGAGGGGGGGGAGGGGGAGGTACGCGAAAGACTGCAGGGCATTGCA CAGGCGCAGGAAAACATGTTTTTAGTTTTGCTCGGTGCACCTTAGACGGG TTAGCGGGAGTGCCAATGAAACAAGAATCATGGGCATAATTTTCTTTTTA TTTCGTCGAGCCTTTGTTCGTACTACCGATACGGTCGCTGTTGTAGAAAG TCTTGCGGATCAACATGCAGAACAGTTTATTGCTGTACTGGCTTGCGGAA TTGCGTGACGCGCGTGGGGCCCGATATTTCGTGGCAAGCGGTGGAGGAGT CAAAAGTGTTCTTTGTCCTTCTTGACTCGGCCGTCCCTGCCCAAGCATCT AGCGTCCAGAATGCCTAGGAAAAGCTTCGGGGGAAGAGTACATTTCAACA GAACGAGTCCTGACTGGAGGGGGTCGATCTTAGCGGGGATCGGATGGGTC TCATGGCTCGGCTCTGGTCATTTCGGGGTGGCATTTTGACGTGCTTTGAT CGCAATGCACCAGAAAAACGGTCGCACCTTCCAACAACAAACCAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1142:20894..28538+

>mRNA_E-siliculosus-1a_F_contig1142.939.1 ID=mRNA_E-siliculosus-1a_F_contig1142.939.1|Name=mRNA_E-siliculosus-1a_F_contig1142.939.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2448bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1142:20894..28538+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGAAGGCATTGTTGATAATCGGCACGCTATGCTCCTTCGCGAACGT
AGGAGCCTTTGTGCCGACATGCCCTAGGATCGCTTCTCCCTCGGCATGCG
CCAGGCCGAGCTCCGCGGGTATCATGAGCCGCGCGTCGGCGCTGGCGGAC
AACAGGGTACGTATGCAGCAACAGCTGCCTACGACACCCGCTGGTGGCCG
TGCCGCTCGCACTGAGCTGTTCTCGACTCCGGCGGCTAGTGGTGACAAGG
ACGCCGCGCCATCGCCTGCCTCAGCCGTGGAGAAGGAGGCCAAGGCTGCT
CCGTCTATGGTGAAGGTCACCGCGTACTTCGGTCTGTGGTACCTCTTCAA
CATCGGATGGCGAAGGCATTGTTGATAATCGGCACGCTATGCTCCTTCGC
GAACGTAGGAGCCTTTGTGCCGACATGCCCTAGGATCGCTTCTCCCTCGG
CATGCGCCAGGCCGAGCTCCGCGGGTATCATGAGCCGCGCGTCGGCGCTG
GCGGACAACAGGGTACGTATGCAGCAACAGCTGCCTACGACACCCGCTGG
TGGCCGTGCCGCTCGCACTGAGCTGTTCTCGACTCCGGCGGCTAGTGGTG
ACAAGGACGCCGCGCCATCGCCTGCCTCAGCCGTGGAGAAGGAGGCCAAG
GCTGCTCCGTCTATGGTGAAGGTCACCGCGTACTTCGGTCTGTGGTACCT
CTTCAACATCGGGTACAACATCTACAACAAGAGGGTTCTCAACATCCTCC
CGATGCCCTGGTTGATGGCGAGCGCCCAGCTCGGGATCGGGTTGCTGTAC
GTGTTCCCGCTGTGGCTGACGAAGCTGCGCAAGGCCCCTAAGCTTGCCGA
CGGTGCCCTCGGACCGCTCAGGTACAACATCTACAACAAGAGGGTTCTCA
ACATCCTCCCGATGCCCTGGTTGATGGCGAGCGCCCAGCTCGGGATCGGG
TTGCTGTACGTGTTCCCGCTGTGGCTGACGAAGCTGCGCAAGGCCCCTAA
GCTTGCCGACGGTGCCCTCGGACCGCTCAGCCAGCTGGCGGCGCTGCACA
CGGTGGCGCACGTGACGGCGGTGCTCTCCCTGGGCGCCGGCGCGGTCTCC
TTCACGCACATCGTCAAGGCTGCCGAGCCCGTCTTCACGGCAGGGTTCTC
GGCCGCCCTCCTCGGGCAGACCTTCGCCGCCCCGGTCTACCTGTCCCTCA
TGCCCATCATCGCGGGAGTGTCCCTGGCGTCCCTCAAGGAGCTCTCCTTC
TCCTGGGTGGCGTTCGGCAACGCCATGGGCTCCAACACGGCCTCCGCGCT
GCGCGGCATCCTGGGCAAGAAGCAGATGGGCAAGCCGGTCGGGGAGAACA
TGAGCCCGGCCAACCTCTACGCCGTGCTGACCGTGCTCGCGTTCTGCTTC
CTGTCGCCCGTGGCGCTGCTGGTGGAGGGCAGGAAGGCCAAGCCCGCGTG
GGACGCGGCCATCGCGGCTGGCGCCACGGCGAAGGGCCTGTCGTCGACCA
TCCTGCTGTCCGGCCTCTTCTACTACCTCTACAACGAGGTCGCCTTCCTC
GCCTTGGACTCCGTCAACCCCGTCACGCCAGCTGGCGGCGCTGCACACGG
TGGCGCACGTGACGGCGGTGCTCTCCCTGGGCGCCGGCGCGGTCTCCTTC
ACGCACATCGTCAAGGCTGCCGAGCCCGTCTTCACGGCAGGGTTCTCGGC
CGCCCTCCTCGGGCAGACCTTCGCCGCCCCGGTCTACCTGTCCCTCATGC
CCATCATCGCGGGAGTGTCCCTGGCGTCCCTCAAGGAGCTCTCCTTCTCC
TGGGTGGCGTTCGGCAACGCCATGGGCTCCAACACGGCCTCCGCGCTGCG
CGGCATCCTGGGCAAGAAGCAGATGGGCAAGCCGGTCGGGGAGAACATGA
GCCCGGCCAACCTCTACGCCGTGCTGACCGTGCTCGCGTTCTGCTTCCTG
TCGCCCGTGGCGCTGCTGGTGGAGGGCAGGAAGGCCAAGCCCGCGTGGGA
CGCGGCCATCGCGGCTGGCGCCACGGCGAAGGGCCTGTCGTCGACCATCC
TGCTGTCCGGCCTCTTCTACTACCTCTACAACGAGGTCGCCTTCCTCGCC
TTGGACTCCGTCAACCCCGTCACGCACGCCGTGGGTAACACGATCAAGCG
CGTGGTTATCATCGTGGCGGCGTGCATCGCGTTCCGCACGCCGATGACGC
CGCTATCCATCGCCGGTTCGACTATCGCGGTGGCCGGCACGCTGCTGTAC
TCCCTGGTGAAGGCACACTACGAGAAGAAGAAGTAGCACGCCGTGGGTAA
CACGATCAAGCGCGTGGTTATCATCGTGGCGGCGTGCATCGCGTTCCGCA
CGCCGATGACGCCGCTATCCATCGCCGGTTCGACTATCGCGGTGGCCGGC
ACGCTGCTGTACTCCCTGGTGAAGGCACACTACGAGAAGAAGAAGTAG
back to top