mRNA_E-siliculosus-1a_F_contig1142.937.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1142.937.1
Unique NamemRNA_E-siliculosus-1a_F_contig1142.937.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: D8LC93_ECTSI (CCHC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC93_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 4.390e-65
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 587
            MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD
Sbjct:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 111
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BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A835YWX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.360e-44
Identity = 84/98 (85.71%), Postives = 87/98 (88.78%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGG---GADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQ 539
            MPATAGRVRMPH NRVSSSSALKMTGIWTNTIGYDPYAAEGG    A A D  NA+EQAQGLMALAKLSN+GVTE RGACKKCG VGHLTFQCRNH+Q
Sbjct:    1 MPATAGRVRMPHNNRVSSSSALKMTGIWTNTIGYDPYAAEGGEAAAAAAADAENAYEQAQGLMALAKLSNEGVTESRGACKKCGMVGHLTFQCRNHLQ 98
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BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A2D4C9D1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9D1_PYTIN)

HSP 1 Score: 141 bits (356), Expect = 4.870e-36
Identity = 70/98 (71.43%), Postives = 79/98 (80.61%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVD 548
            MPATAGRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAEG     +   +++EQA+GLMALAKLSNQG  E RGACKKCG +GHLTFQCRN +   D
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEGEEQQGQVSQSSYEQAKGLMALAKLSNQG-NEVRGACKKCGMLGHLTFQCRNFLDMGD 97
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BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A2P4YHG3_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHG3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.030e-34
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 536
            MPATAGRVRMPH NR+ SS+ALKMTGIW +TIGYDPYAAEG     E    ++EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKDTIGYDPYAAEG--EKKETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91
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BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A6A3SK00_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SK00_9STRA)

HSP 1 Score: 138 bits (347), Expect = 9.210e-33
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 536
            MPATAGRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAE    +  D   +FEQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEDEKQETSD--TSFEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A329RX20_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX20_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.050e-32
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 536
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    ++EQA+GLMALAKLSN+  ++ RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGE-QQGETSETSYEQAKGLMALAKLSNKS-SDVRGACKKCGMVGHLTFQCRNHL 92
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A833TGJ4_PHYIN (Zinc knuckle n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TGJ4_PHYIN)

HSP 1 Score: 137 bits (345), Expect = 1.060e-32
Identity = 71/111 (63.96%), Postives = 82/111 (73.87%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 587
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    + EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+     G   + ++ +SD
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGE-QQGETNETSLEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL----GGEEKRVMSSDSD 105
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BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A0W8C9S2_PHYNI (CAX-interacting protein 4 n=17 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9S2_PHYNI)

HSP 1 Score: 137 bits (345), Expect = 1.260e-32
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 536
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    ++EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWXNTIGYDPYAAEGE-KQGETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 92
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A3M6VM93_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM93_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.010e-32
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 536
            MPAT+GRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAE      E    ++EQA+GLM LAKLSN+G ++ RGACKKCG VGHLTFQCRNH+
Sbjct:   15 MPATSGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAED--EKKETTETSYEQAKGLMTLAKLSNKG-SDVRGACKKCGKVGHLTFQCRNHL 105
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Match: A0A8K1FHX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHX2_PYTOL)

HSP 1 Score: 135 bits (340), Expect = 5.240e-32
Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 3 
Query:  255 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 536
            MPA+AGRVRMPH NR+ SS+ALKMTGIWTNTIGYDPYAAEG     E   +++EQAQGLMALAKLSN+   + RGACKKCG +GHLTFQCRN +
Sbjct:    1 MPASAGRVRMPHNNRMHSSAALKMTGIWTNTIGYDPYAAEGE-EKKEVSQSSYEQAQGLMALAKLSNKS-NDVRGACKKCGMLGHLTFQCRNFL 92
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1142.937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC93_ECTSI4.390e-65100.00CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YWX5_9STRA1.360e-4485.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4C9D1_PYTIN4.870e-3671.43Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2P4YHG3_9STRA4.030e-3472.34Zinc ion binding protein n=1 Tax=Phytophthora palm... [more]
A0A6A3SK00_9STRA9.210e-3373.40Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A329RX20_9STRA1.050e-3272.34Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A833TGJ4_PHYIN1.060e-3263.96Zinc knuckle n=1 Tax=Phytophthora infestans TaxID=... [more]
A0A0W8C9S2_PHYNI1.260e-3272.34CAX-interacting protein 4 n=17 Tax=Phytophthora Ta... [more]
A0A3M6VM93_9STRA2.010e-3271.28CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A8K1FHX2_PYTOL5.240e-3272.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1142contigE-siliculosus-1a_F_contig1142:2709..8846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size822
Model size2271
Exons7
Ec32 orthologEc-14_005630.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03019,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG2985@1,KOG2985@2759
EggNOG free text desc.zinc ion binding
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
KEGG koko:K11493
Preferred nameSREK1IP1
Seed eggNOG ortholog2880.D8LC93
Seed ortholog evalue2.4e-57
Seed ortholog score229.2
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927653.2363188-UTR-E-siliculosus-1a_F_contig1142:2708..39031622927653.2363188-UTR-E-siliculosus-1a_F_contig1142:2708..3903Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1142 2709..3903 -
1696318626.6490295-UTR-E-siliculosus-1a_F_contig1142:2708..39031696318626.6490295-UTR-E-siliculosus-1a_F_contig1142:2708..3903Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1142 2709..3903 -
1622927656.8464777-UTR-E-siliculosus-1a_F_contig1142:8592..88461622927656.8464777-UTR-E-siliculosus-1a_F_contig1142:8592..8846Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1142 8593..8846 -
1696318626.7477863-UTR-E-siliculosus-1a_F_contig1142:8592..88461696318626.7477863-UTR-E-siliculosus-1a_F_contig1142:8592..8846Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1142 8593..8846 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927653.2526-CDS-E-siliculosus-1a_F_contig1142:3903..39971622927653.2526-CDS-E-siliculosus-1a_F_contig1142:3903..3997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 3904..3997 -
1696318626.6652217-CDS-E-siliculosus-1a_F_contig1142:3903..39971696318626.6652217-CDS-E-siliculosus-1a_F_contig1142:3903..3997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 3904..3997 -
1622927653.265659-CDS-E-siliculosus-1a_F_contig1142:4324..44291622927653.265659-CDS-E-siliculosus-1a_F_contig1142:4324..4429Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 4325..4429 -
1696318626.6765878-CDS-E-siliculosus-1a_F_contig1142:4324..44291696318626.6765878-CDS-E-siliculosus-1a_F_contig1142:4324..4429Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 4325..4429 -
1622927653.2790809-CDS-E-siliculosus-1a_F_contig1142:5200..54331622927653.2790809-CDS-E-siliculosus-1a_F_contig1142:5200..5433Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 5201..5433 -
1696318626.6929507-CDS-E-siliculosus-1a_F_contig1142:5200..54331696318626.6929507-CDS-E-siliculosus-1a_F_contig1142:5200..5433Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 5201..5433 -
1622927653.2893562-CDS-E-siliculosus-1a_F_contig1142:5912..59901622927653.2893562-CDS-E-siliculosus-1a_F_contig1142:5912..5990Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 5913..5990 -
1696318626.7045813-CDS-E-siliculosus-1a_F_contig1142:5912..59901696318626.7045813-CDS-E-siliculosus-1a_F_contig1142:5912..5990Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 5913..5990 -
1622927653.2988715-CDS-E-siliculosus-1a_F_contig1142:6772..68471622927653.2988715-CDS-E-siliculosus-1a_F_contig1142:6772..6847Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 6773..6847 -
1696318626.7144916-CDS-E-siliculosus-1a_F_contig1142:6772..68471696318626.7144916-CDS-E-siliculosus-1a_F_contig1142:6772..6847Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 6773..6847 -
1622927653.3128786-CDS-E-siliculosus-1a_F_contig1142:7403..74331622927653.3128786-CDS-E-siliculosus-1a_F_contig1142:7403..7433Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 7404..7433 -
1696318626.7250822-CDS-E-siliculosus-1a_F_contig1142:7403..74331696318626.7250822-CDS-E-siliculosus-1a_F_contig1142:7403..7433Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 7404..7433 -
1622927653.3281944-CDS-E-siliculosus-1a_F_contig1142:8385..85921622927653.3281944-CDS-E-siliculosus-1a_F_contig1142:8385..8592Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 8386..8592 -
1696318626.7367365-CDS-E-siliculosus-1a_F_contig1142:8385..85921696318626.7367365-CDS-E-siliculosus-1a_F_contig1142:8385..8592Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1142 8386..8592 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1142.937.1prot_E-siliculosus-1a_F_contig1142.937.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1142 3904..8592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1142.937.1

>prot_E-siliculosus-1a_F_contig1142.937.1 ID=prot_E-siliculosus-1a_F_contig1142.937.1|Name=mRNA_E-siliculosus-1a_F_contig1142.937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=274bp
MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEA
NAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAG
APMQAVAEESDSDSDDISSCSSVSDSSDEEDSRRRKSGGGSGATSKGSKG
KEKKSSRASSSSHKDRDRGRDRDGGGGKRKRRREADSSDDEGSNDSDSGS
DVRRKGSGSSKKRRARSGDDSSKDKGKPERRERKEKRRKDREREKSRKSS
SKKSKKDKREKKSKHSKHSSRKK*
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mRNA from alignment at E-siliculosus-1a_F_contig1142:2709..8846-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1142.937.1 ID=mRNA_E-siliculosus-1a_F_contig1142.937.1|Name=mRNA_E-siliculosus-1a_F_contig1142.937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6138bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1142:2709..8846- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGTCCTGCCTTGCTTTGTTGTGTTTGTTGCTCGCCTCAGGTACAGTTTA
CACGTACACTACCTGAGCAAATAACGGGAGCCCGAGCGAGTCAAATAGAG
CTACAACAGAGGTGGTTGCTTTGTGCTGGCAAGACCCAATCTCGAGATAT
TGCTGTGTCGGACAAGAGGGCATCCCGCCAGGCAGGAAGTGTGGGCCAAC
ACGACGCACTGACTCCAGCCGAGCGTTCGACCAGAGGGAACACTCGCCGC
CACCATGCCGGCTACCGCGGGGAGAGTGCGCATGCCGCACGGCAACCGCG
TCAGCAGCAGCTCTGCCCTCAAGATGACGGGCATCTGGACCAACACCATT
GGGTATGACCCGTACGCCGCCGAGGGCGGGGGAGCCGATGCCGAGGACGA
AGCCAACGCGTTCGAGCAGGCGCAGGGGCTGATGGCGCTGGCGAAGCTTT
CGAACCAGGGGGTGAGTGGTGGGATAGTTATGGAGAAATAAATACACGCA
CAGAAAGACTACCCATTCGAGATATACCCACAGTCGAACGGGATGTGGTG
GATTCTTTTCAGTTCTACCCGTAGGCAACGCGTGCGTTGCCTCATTCATT
GATAATGTTAGCTTTCGCGAAAGCAGTAGTGGACGTGCCGCTAATGTAGG
TCTGGGTGTGCGGTAGGGGTGGTAACCTACGCAATGTCAGAACGCGCCTG
GGAGACGAGACCCTGCTTTGTTCATCCCTTGTCCACAGCGTAGACTACAC
TTCCGATGCTCCCAGTTTTTAACTCCCTACGGCCTCTCTAGCTAACAGAA
GTGCTGCCCGAAATCACACAGAAGAAAATTCGCCTGCGAGGCGTTTGTTG
TTTCTTGCCTTCAATAAACACTGCGGTCGAGCGGCCTTGGTACTCTTGGT
CGCGTTCACTTCCTGACCAAGCCTGAGCCTCCACAATGAGCTGCACGGCC
TGTAGATCTCCCTTCGCCGACTATCCAATGGCTTGCTGGTTGCGCGCTTT
TTTTATGTAGGAGTAGTAGTAGTTGCTTGTTGTTGCTGTTGTTGCTGCTG
CTGTTGTTGCTACTGTACAAAACCAAGATTTTCACCCAGCTCCTGTACAT
ACGTACACTTGAGGCTTGGAGCGATCCTATATCGAATATTGGAGTAGCTC
CCAGCTGGACACAAGCCTCTTCTTGGGTCAGTGATACTTGTATGGCTTTT
CACATGGGTCGACCAGCCACCACACAAGCACGTAGTATACGACGCCCAAC
AAACCGCAATTGCTTCCGTCGCGGCCGCGCACCTTACGGGGTATCCGACT
TTCGGGCGGAGTTCGTTCGTGGCAATCGTGTTTTCCTTTAATCGATAGCG
TTGCTTCCTCCGCCCCCCCGCCTGCGCTCCGCGAATCATGAACGACGTAT
GTACTGCGCGCAGGTCACGGAGCAGCGAGGAGCTTGCAAAAAGGTGGGTG
GGCGGCTCGTTGATGTTGAGCGTGGCTCGTTTGATTGAATAGCAATTGAC
GTAGCAGCTGCTTGGGGCCACCACTTTTCTTGTAGCCATGACCTGTTGAG
AGAAAATGTCTGTACCCTCTGCTGGCTGCTGGCCGTGTTTCTCTAGGGGG
GCTGTACTCCGACACCAGCCGAGGAAATTCTCACTCTTGATGATGTTGTG
ATGTTTGGGTTGTCGACAACGGGCAACGTCGACTGACCCGCAGACTGCGC
TGCTCAGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCTTCTTC
CCTTCCACCACAAACCTACNNNNNNNNNNCAACGGGCCACGTCGACTGAC
CCGCAGACTGCGCCGCTCACCCCCCCCCCCCCCCCGTTGACCCCCTCTTC
TCTCCCCACCCCTTCCTGTCTCGTTCTTCCTTCCCCCCTCCCTTTCTTGA
ATTGGTTGTTTCGAACACATAAACCGTGTTGACTCTCACGTCACTGTAGT
GCGGATCGGTGGGCCACCTGACCTTCCAATGCCGGAACCACATCCAGCCT
GTCGACGCGGGCGCGCCCATGCAGGTACGTACGGCAGCAGTGACTCGGGG
TTGATGGGGTATGCTTCGGGTGAGAGGATACCAACACGGTCTAGAGAGGG
GTCCTCTTGTGGTTGAGAAAAGTTGGATCGGCGTGGGAGAGGAAAGCTTC
TCCAGTTGAGAACGGTGCAATCGACGGAGTGATAGGGGGAACCTTACGCG
GTGCGGGAGGGTGCGGCTAAACTCCTGTGTGTGAGAACGTCTTGGTCGGA
TGGTTTCATCTCCTTTTGAGAAGTGGTGCTACTGAAGCGTAGAGATTACG
ACCTTTGACAGCAATGGTGCACTTGACACCGGTCCCACGACTTGTCGCGG
GAAGTCTCCAAGTTGGATAAGTCGCGTGAACTATTGCTTGAACTGCTGTT
GCGGGCAACAAACGAGAGGCCTTTAGGTGTCCTCGGTTAAGACTTCGTCG
TCCGTGTCGGCACCATCGACACCGAAAAGATCATTCCTCTAGCAGTATTG
CATCTGGCTTGACACTAGAGGAGAGACGATAGATATTAACAGAAGTAGCG
GATATCTTCCTCTCTGTCTTTTTTGGGTGTACAAGTATCTCGCTTGGCCA
ATCCTTCCGTACCCCTCGGTGTCTGTTTTCACACACACCCTCTCGGTTCT
TGGTGGCCGTCTCTCCTTTAATGACGACCGCCTACCCCCAACGCCTACCC
TTCACCCACCTCGCGTGGAACTGCTCACACTCAACGGCCTTGCTTGTTTT
TTCTCTTGTCGCGTCGTTCCTCGTCGTTTTCCTATTTCTGGTTGTGCACC
CGCCAGGCGGTTGCGGAGGAGTCTGATTCCGACTCGGACGACATCAGCTC
TTGCTCCTCGGTGTCCGACAGCAGTGACGAGGAGGTAACGCTGCATGCTA
CATGTACATAACCATCGAAGGGAACCCCCGCCGTAAGAAACTAAACGCAG
CACGGCGATGCGATTGGCGCTTTGCTTCAAAACCAAAACCAGGCGGGTCG
GTGAAGCTCCGATGTTCTCCGCCCGACCTAGCTTTGCGGGGATACTTGGG
TCTAGGGTATGGACGCTAGGACTTGGATGACTGCGAGTCCCGCCCCTCCT
CCCGCCCAGACGAGGGTAGAAGTAAATTGAAGCATCTTGTGCATTGGTGC
AGTGGTTGTGCAAGTCCTCAAACGGTGCTCAGATTGGTGATTGATTCTGT
TGTGTGGAGATTCTGGGTTTCTGTCGTGATATGCGGTACACGCAAGATGC
TGGCGGGGTCAAAACTTAGCTCCCTACGTGTTAGTCGCGCATCGTAGCTA
CTGCAGCTTACGGCCCCTATCGTCTGTGTGATCCACGTTTTGTGTGCCTG
GTATGCCCAACAGGACTCGCGGCGACGCAAGAGTGGCGGCGGGAGCGGCG
CAACCAGCAAGGGCAGCAAGGGTAAGGAGAAGAAGAGCAGCCGGGCCTCG
TCTTCCTCCCACAAGGATAGGGACAGGGGCAGGGATAGGGACGGCGGGGG
GGGCAAGAGAAAAAGGCGGAGGGAGGCGGATAGCAGCGATGACGAGGGGA
GCAACGACAGCGACAGCGGCAGCGACGTCCGTCGCAAGGGTTCGGGGTGA
GTCTTTGATTTGTTTCTGCCTTGGGTTCTGTTGAGCGGTGGCGGGGCGTT
GTGATTGATGCGGAACGCAGGGCTTCAACAATGAAATTTTTGCTCTCTCG
AGAACAACTTGTTTGAATGGTCGCCTATTTCACTGTTACTTGGGAGACAG
TGGGGAGGCGATGGTTGATGATGCAGCAAGGCTGTAATCTTGACTTGAGC
GCGCTACGAGTTTAATGCAACAGCAGTGTTAATGCCTGCAACTCATTGCC
TGTGAACCAAGTAATGGAAATGGTGTATATTCCCTGAAGCAGTATTTAGT
GGTTTTGTAGGCTTTCCCCGACGAGGTTGCCAACGTGTCAGGTCTCCAAT
GTAAATGAAAATCTCGGTGGGGTGCGGGTGTCCTAGTCTACCGTCCCTCA
AGCTTCTTCCTCGCGAATGCGTGAAAATTTGCAGCAAGTGCTCACACGGC
ACGTACGCTTGTCCAACCCTCCGGTGGCGCGTTTGAAACGTTCGAGTACG
TTGGTCACGACGTAGCATCTTCCTCTTGTCTACCCTACAGTTCCAAAGCG
AGAGTACCGCGATAGCCTGGTCAACGTTACTTGTTTTGAATGCATGATAC
CCGCATATGGCGCTCCGGCGGCTTGGTGTCGTGCGCATTGCGTTAAGCGA
GCTATGAAAATGACCGTACGTTCCGCTTTGGTTTGTAACGGTTTCGAGAG
GCGTAGTATGGCTCATCTTCTTGTTGCTCTGCTGTTTCCCAATACTTGAC
AATTCTGTTTCCTCAAGGTCAAGCAAGAAGCGGCGAGCGCGAAGTGGCGA
CGATTCTTCCAAGGATAAGGGCAAGCCGGAGCGACGGGAGCGAAAGGAAA
AGAGGCGGAAGGACCGGGAGAGGTCAGTCGTATTTTTGGGGTTAATTCAC
TGCGTCATCCCTAGTTTTGTTGTTGCTGGCCTCGTTTCAGGCTGGTACCT
CCCCAGATTGATGAGAAACACGAAGGGGCTGGATTGAGGCCGGCCTAGTT
TTCAAAGGGGAGCTTGCAGCGTCGACGAAAAGAACAGCAAATCGCAAAGT
GTACATCGTTTTCATGTACCCACTCGCCCTTGTGACACGGCACAAAGTTT
TTATCTGCCCTCGTGCATTTCCATCTCGTGTGTCGTTTCAATGTTTTGAC
GCCGTGCCTCGTTTTATCTGTGTTGTTGTTGCTGCTGTGATGATCTCAGG
GAAAAATCGCGCAAGTCGTCCTCGAAAAAGTCCAAGAAAGACAAGCGAGA
AAAGAAGAGCAAGCACAGCAAGCACAGCAGCCGGAAGAAGTGATTCGTCT
GTTTTCGTCTTTGTATGTACCAGGCACCCCAGAAGGGCGAAGCACCGCAA
TCGCGGGGTGGGAGAGGTGGCCAATTGAGTGCTGTGTTGCAACCGATGAT
GCGAAGAGTGCGCGCGTGTGTGTGGGCCATCCAAGCGACGAGTGTACGAT
AAGAGATAATGTTTGGGCGAGGGGAGCAGCTCGAACCGACCCCCCAAAGC
CTCGACGACATGTATGCGGGAAATGCTGACGCGAAGGCCTGGTTGGTAAG
AAACAGAGGCAGGGAGAGGGGCAAGAGGCAATGAAGCTGTCGTACGTTGC
GTGCTGTTCGGCTTTGTTTGTTTTGGTCTCTTTGTGCTTCGTTCTGGGAA
TGTTCGCGGGGATGGGTGGGCTCAGTCTCTCAAGCTATCCTCCTGAGCCT
GAGTAGAACATGCGTCGCTTGGAGATTTCTGTTGTGAGCAATTACGTCGT
TGGGAACGAGCGCCCGCCTTGCGGCATTTAGACACAAGTAACCAACCCTC
TGTTGACGTTTGTGATGGAGACAAGCATGCGTTCCTGCGTGAAGCTAGCA
TCTTTTGAAGCTGGTGTGGACGAGAAGGGGATAGTATTGTCGCAAGCACT
TTGATACGCCAATGAAAGCAAGTGCCCACACCTCAGGTCGTGCCTTTTGA
CCGTAGTGGTAGTGCTTTCACAGTTGCATTTGCGAGGATGGCCTTTCACC
CGTCTGATGTAGAAGTGTGAACGGGTGCATTGTTGCCTTATGGAGTTTCG
TATGTTCGATACATTTTCTCGAATTCTTGCTTTGCCGTAGTCACATCCGG
TGGTTTCCAGGATAGGCTACAACGTGTTACCGAAAATTAGACTGGGATCT
GAAAGGTAGTTCAAGGGAAAGATAAAGATTAACAGGCTGTGGCAGGAGTT
GCAGTTCCCTAGGACAGCATTACACTCGTATCAGGAGAAGGCCCCGCGCC
GTTGGAGGAACCACTCCCTTTGTTCAGTCTACCACTTCCTTGTTCAGTTT
ACCACTCCCTTGTTCAGTCTACCAAAGAGAGCAAGACAACAGCACGGACT
GCTGCTCAAAGAGGTTTAATCAACAAGTGATCTTCGCAGGGTCTTCAGAG
CTGGCTATGCGCGGAACATCCAACGTAACTCGACACAAGTAGACTTGCCA
GCATTGGCCATTGGTCCATGTACCCATCAGGATGATGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1142:2709..8846-

>mRNA_E-siliculosus-1a_F_contig1142.937.1 ID=mRNA_E-siliculosus-1a_F_contig1142.937.1|Name=mRNA_E-siliculosus-1a_F_contig1142.937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1644bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1142:2709..8846- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGGCTACCGCGGGGAGAGTGCGCATGCCGCACGGCAACCGCGTCAG
CAGCAGCTCTGCCCTCAAGATGACGGGCATCTGGACCAACACCATTGGGT
ATGACCCGTACGCCGCCGAGGGCGGGGGAGCCGATGCCGAGGACGAAGCC
AACGCGTTCGAGCAGGCGCAGGGGCTGATGGCGCTGGCGAAGCTTTCGAA
CCAGGGGATGCCGGCTACCGCGGGGAGAGTGCGCATGCCGCACGGCAACC
GCGTCAGCAGCAGCTCTGCCCTCAAGATGACGGGCATCTGGACCAACACC
ATTGGGTATGACCCGTACGCCGCCGAGGGCGGGGGAGCCGATGCCGAGGA
CGAAGCCAACGCGTTCGAGCAGGCGCAGGGGCTGATGGCGCTGGCGAAGC
TTTCGAACCAGGGGGTCACGGAGCAGCGAGGAGCTTGCAAAAAGGTCACG
GAGCAGCGAGGAGCTTGCAAAAAGTGCGGATCGGTGGGCCACCTGACCTT
CCAATGCCGGAACCACATCCAGCCTGTCGACGCGGGCGCGCCCATGCAGT
GCGGATCGGTGGGCCACCTGACCTTCCAATGCCGGAACCACATCCAGCCT
GTCGACGCGGGCGCGCCCATGCAGGCGGTTGCGGAGGAGTCTGATTCCGA
CTCGGACGACATCAGCTCTTGCTCCTCGGTGTCCGACAGCAGTGACGAGG
AGGCGGTTGCGGAGGAGTCTGATTCCGACTCGGACGACATCAGCTCTTGC
TCCTCGGTGTCCGACAGCAGTGACGAGGAGGACTCGCGGCGACGCAAGAG
TGGCGGCGGGAGCGGCGCAACCAGCAAGGGCAGCAAGGGTAAGGAGAAGA
AGAGCAGCCGGGCCTCGTCTTCCTCCCACAAGGATAGGGACAGGGGCAGG
GATAGGGACGGCGGGGGGGGCAAGAGAAAAAGGCGGAGGGAGGCGGATAG
CAGCGATGACGAGGGGAGCAACGACAGCGACAGCGGCAGCGACGTCCGTC
GCAAGGGTTCGGGGACTCGCGGCGACGCAAGAGTGGCGGCGGGAGCGGCG
CAACCAGCAAGGGCAGCAAGGGTAAGGAGAAGAAGAGCAGCCGGGCCTCG
TCTTCCTCCCACAAGGATAGGGACAGGGGCAGGGATAGGGACGGCGGGGG
GGGCAAGAGAAAAAGGCGGAGGGAGGCGGATAGCAGCGATGACGAGGGGA
GCAACGACAGCGACAGCGGCAGCGACGTCCGTCGCAAGGGTTCGGGGTCA
AGCAAGAAGCGGCGAGCGCGAAGTGGCGACGATTCTTCCAAGGATAAGGG
CAAGCCGGAGCGACGGGAGCGAAAGGAAAAGAGGCGGAAGGACCGGGAGA
GGTCAAGCAAGAAGCGGCGAGCGCGAAGTGGCGACGATTCTTCCAAGGAT
AAGGGCAAGCCGGAGCGACGGGAGCGAAAGGAAAAGAGGCGGAAGGACCG
GGAGAGGGAAAAATCGCGCAAGTCGTCCTCGAAAAAGTCCAAGAAAGACA
AGCGAGAAAAGAAGAGCAAGCACAGCAAGCACAGCAGCCGGAAGAAGTGA
GGAAAAATCGCGCAAGTCGTCCTCGAAAAAGTCCAAGAAAGACAAGCGAG
AAAAGAAGAGCAAGCACAGCAAGCACAGCAGCCGGAAGAAGTGA
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