mRNA_E-siliculosus-1a_F_contig1141.934.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A6H5KHJ2_9PHAE (Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHJ2_9PHAE) HSP 1 Score: 379 bits (974), Expect = 4.270e-130 Identity = 186/198 (93.94%), Postives = 187/198 (94.44%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+GVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFR YDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY
Sbjct: 198 EGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFR-----------YDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 384
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A836CII9_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII9_9STRA) HSP 1 Score: 290 bits (741), Expect = 3.700e-94 Identity = 132/197 (67.01%), Postives = 160/197 (81.22%), Query Frame = 1
Query: 4 GVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
GVCSNFLC A AG V++ GPSGKIML+PE+ P D+IMVGTGTG+APYRGF++RLF+EDTPAARA+TG AWLFLGVA + LLYH+DW+ ++R+FPFNFR YD+ALSREQ+N +GGKMYIQD++E+YADE+F++LD GAHIYFCGLKGMMPGI DMLARVA +G+ W+ LK GQWHVEVY
Sbjct: 244 GVCSNFLCDAAAGAAVSIAGPSGKIMLMPEQDPTTDIIMVGTGTGVAPYRGFVRRLFQEDTPAARAYTGQAWLFLGVANRDALLYHEDWLSVVRRFPFNFR-----------YDVALSREQQNRAGGKMYIQDKMEEYADELFDKLDNGAHIYFCGLKGMMPGINDMLARVARSKGLVWEDAFAALKKNGQWHVEVY 429
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A8J5XIC4_DIALT (Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIC4_DIALT) HSP 1 Score: 275 bits (702), Expect = 2.650e-89 Identity = 128/198 (64.65%), Postives = 154/198 (77.78%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+GVCSNFLC + G+E+++TGPSGK+ML+PE+ P D+IMV TGTGIAPYRGF++RLF E TPAA A+ G AWLFLGVA ++ LLY D+W R FP NFR D ALSREQ N SGGKMYIQD+VE+YADE+F +L+ GAH+YFCGLKGMMPGIT+ML RVA +GISW+ KL+ELK GQWHVEVY
Sbjct: 164 KGVCSNFLCDSTPGREISMTGPSGKVMLMPEKDPKTDLIMVATGTGIAPYRGFIRRLFVEKTPAAAAYEGQAWLFLGVANSDSLLYDDEWQAAKRSFPSNFRL-----------DYALSREQNNKSGGKMYIQDKVEEYADEIFAKLENGAHMYFCGLKGMMPGITEMLERVAQSKGISWEEKLEELKKNGQWHVEVY 350
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A7S3KVQ4_9STRA (Ferredoxin--NADP(+) reductase n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3KVQ4_9STRA) HSP 1 Score: 273 bits (699), Expect = 5.690e-89 Identity = 129/198 (65.15%), Postives = 153/198 (77.27%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+G+CSNFLC G EV +TGP+GK+ML+PEE P+ D IMV TGTGIAPYRGF++RLF EDTPAA A+ G AWLFLGVA ++ LLY D+W E+ +KFP NFR D ALSREQ N SGGKMYIQD+VE+YADE+F +LD GAHIYFCGLKGMMPGI DML +VA ++G+ +D LK LKSK QWHVEVY
Sbjct: 155 KGICSNFLCDTEPGAEVQMTGPAGKVMLMPEEDPNTDYIMVATGTGIAPYRGFIRRLFVEDTPAAEAYKGEAWLFLGVANSDALLYDDEWQEVKKKFPKNFRL-----------DYALSREQTNKSGGKMYIQDKVEEYADEIFSKLDNGAHIYFCGLKGMMPGIQDMLKKVAEDKGLDYDEWLKGLKSKKQWHVEVY 341
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A0M0LR35_9EUKA (Ferredoxin--NADP(+) reductase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LR35_9EUKA) HSP 1 Score: 270 bits (691), Expect = 2.800e-87 Identity = 125/198 (63.13%), Postives = 152/198 (76.77%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+GVCSNFLC A+ G E+ LTGPSGK+ML+PE+ P+ D+IMV TGTGIAPYR F++RLF E TP + G AWLFLGVA + LLY D+W E+L+K+P NF K D ALSREQKN GGKMYIQD+V++YADEVF R+D GAH+YFCGLKGMMPGIT+ML V+ ++G+ W+ KLKE K KGQWHVEVY
Sbjct: 191 KGVCSNFLCDAKPGDELMLTGPSGKVMLIPEKDPNVDLIMVATGTGIAPYRSFIRRLFVEKTPYGEVYKGLAWLFLGVANADALLYDDEWQEVLKKYPKNF-----------KVDYALSREQKNVDGGKMYIQDKVKEYADEVFTRMDNGAHMYFCGLKGMMPGITEMLEEVSSKKGLVWEDKLKEWKEKGQWHVEVY 377
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A8J6C0Y3_DIALT (Ferredoxin--NADP(+) reductase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C0Y3_DIALT) HSP 1 Score: 268 bits (686), Expect = 1.750e-86 Identity = 125/198 (63.13%), Postives = 153/198 (77.27%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+GVCSNFLC A+ GQE+T+TGPSGK+ML+PE+ P D+IMV TGTGIAPYRGF++RLF E TPA A+ G AWLFLGVA ++ LLY D+W L+ P NFR D ALSREQ N +GGKMYIQD+VE+YADE+F +L+ GAH+YFCGLKGMMPGIT+ML RVA +G++W+ L+ LK KGQWHVEVY
Sbjct: 194 KGVCSNFLCDAKPGQELTMTGPSGKVMLMPEQDPKTDLIMVATGTGIAPYRGFIRRLFVEKTPAGAAYKGQAWLFLGVANSDSLLYDDEWQASLKTHPSNFRL-----------DYALSREQNNKAGGKMYIQDKVEEYADEIFAKLEKGAHMYFCGLKGMMPGITEMLERVAKSKGLAWEEFLEGLKKKGQWHVEVY 380
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: B7GCT8_PHATC (Ferredoxin--NADP(+) reductase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT8_PHATC) HSP 1 Score: 267 bits (682), Expect = 2.070e-86 Identity = 125/198 (63.13%), Postives = 151/198 (76.26%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+G+CSNFLC + G EV +TGP+GK+MLLPEE PD D IMV TGTGIAPYRGF++RLF E+TPA A+ G AWLFLGVA ++ LLY D+W +L+++P NFR D ALSREQ+N +GGKMYIQD+VE+YADE+F +LD GAHIYFCGLKGMMPGI DML V E+ + +D LK LKSK QWHVEVY
Sbjct: 154 KGICSNFLCDTKPGDEVNMTGPAGKVMLLPEEEPDTDYIMVATGTGIAPYRGFVRRLFTEETPAGEAYKGQAWLFLGVANSDALLYDDEWQTVLKEYPENFRL-----------DYALSREQENKNGGKMYIQDKVEEYADEIFAKLDSGAHIYFCGLKGMMPGIQDMLKSVCEEKKVDYDEWLKGLKSKKQWHVEVY 340
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A1Z5K265_FISSO (Ferredoxin--NADP(+) reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K265_FISSO) HSP 1 Score: 265 bits (677), Expect = 1.150e-85 Identity = 123/198 (62.12%), Postives = 153/198 (77.27%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+G+CSNFLC + G E+ +TGP+GK+ML+PEE P+ D+IMV TGTGIAPYRGF++RLF EDTPAA A+ GTAWLF+GVA ++ LLY D+ E+ +KFP NFR D ALSREQ+N GGKMY+QD+VE+YADE+F +LD GAHIYFCGLKGMMPGI DML VA + I ++ +KELK+K QWHVEVY
Sbjct: 153 KGICSNFLCDTKPGDEIQMTGPAGKVMLIPEENPNTDLIMVATGTGIAPYRGFIRRLFFEDTPAANAYKGTAWLFMGVANSDALLYDDELQEVKKKFPNNFRL-----------DYALSREQENKKGGKMYVQDKVEEYADEIFTKLDNGAHIYFCGLKGMMPGIQDMLKGVAESKNIDYEEWVKELKAKKQWHVEVY 339
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A7S2NN56_9EUKA (Ferredoxin--NADP(+) reductase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NN56_9EUKA) HSP 1 Score: 263 bits (672), Expect = 4.370e-85 Identity = 123/198 (62.12%), Postives = 150/198 (75.76%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+GVCSNFLC ++ GQE+ LTGPSGK+ML+PE+ P+AD+IMV TGTGIAPYR F++RLF ED+P + G AWLFLGVA T+ LLY D+W +L+ P NFR D ALSREQ N GGKMYIQD+V++YADEVF R+D GAH+YFCGLKGMMPGIT+ML V+ +G+ W+ KLKE K GQWHVEVY
Sbjct: 140 KGVCSNFLCDSKPGQELKLTGPSGKVMLIPEKNPNADLIMVATGTGIAPYRSFIRRLFVEDSPYGGDYKGLAWLFLGVANTDALLYDDEWQPILKSHPNNFRL-----------DYALSREQTNVDGGKMYIQDKVKEYADEVFTRMDNGAHMYFCGLKGMMPGITEMLESVSKSKGMVWEEKLKEWKKAGQWHVEVY 326
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Match: A0A7S4UKW4_9STRA (Ferredoxin--NADP(+) reductase n=6 Tax=Eukaryota TaxID=2759 RepID=A0A7S4UKW4_9STRA) HSP 1 Score: 264 bits (674), Expect = 4.580e-85 Identity = 127/198 (64.14%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 1 QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRCEGREGKEGRKYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGGAHIYFCGLKGMMPGITDMLARVAGERGISWDAKLKELKSKGQWHVEVY 594
+G+CSNFLC + G EV +TGP+GK+ML+PEE P D IMV TGTGIAPYRGF++RLF EDTPAAR + G AWLFLGVA ++ LLY D++ KFP NFR D ALSREQ+N GGKMYIQD+VE+YADEVF++L GAHIYFCGLKGMMPGITDML VA E+GI +D LK LK QWHVEVY
Sbjct: 164 KGICSNFLCDTQPGDEVMMTGPAGKVMLMPEEDPTTDYIMVATGTGIAPYRGFVRRLFAEDTPAARVYKGEAWLFLGVANSDALLYDDEFQAAKEKFPDNFRI-----------DYALSREQENKKGGKMYIQDKVEEYADEVFDKLSNGAHIYFCGLKGMMPGITDMLQGVAAEKGIDYDEWLKGLKKAKQWHVEVY 350 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1141.934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1141.934.1 >prot_E-siliculosus-1a_F_contig1141.934.1 ID=prot_E-siliculosus-1a_F_contig1141.934.1|Name=mRNA_E-siliculosus-1a_F_contig1141.934.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=199bp QGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYback to top mRNA from alignment at E-siliculosus-1a_F_contig1141:34093..36888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1141.934.1 ID=mRNA_E-siliculosus-1a_F_contig1141.934.1|Name=mRNA_E-siliculosus-1a_F_contig1141.934.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2796bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1141:34093..36888- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1141:34093..36888- >mRNA_E-siliculosus-1a_F_contig1141.934.1 ID=mRNA_E-siliculosus-1a_F_contig1141.934.1|Name=mRNA_E-siliculosus-1a_F_contig1141.934.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1194bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1141:34093..36888- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |