mRNA_E-siliculosus-1a_F_contig1141.933.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 1052 bits (2720), Expect = 0.000e+0 Identity = 527/671 (78.54%), Postives = 563/671 (83.90%), Query Frame = 3
Query: 3 ATCVDDDNITADIAGSCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLDDFSCVDFACVDPNAPCVDDDVTEGMFEDCFSFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDGSDCSDFVCIDPTASCFDESITVDMYEYCDVELLGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSSFACIDPRFVTPSPTPVPLSSECLDDPACEDGTRGQSVDNPGAQERAIIQGSIAAIIVTVINVSYLAFRKKGKGADEVHCYLLLMAFAFSVVEGISIILLVPDSKENLKIGAVLFFGAVAALSGFFLRKSGLYASAAIVNAVLEALFALFVLLFFVEQSTRNIFVFGVTAGNEALVGLAIVVRVGGRSTSDENAAEA-------------------KREIFVLLVEAVGDMLFPLTATLVQSFFHRDSAWRSDFVRTWWAITGLANTAALCMCFVPPVNRIAFGPKFACLSQLFFSLVTGILSFVILTLTEVKITNPPTFDIVWSSVSGAVGVLYAKGCWEVFEYIRRIPDGQSIGDVVNSLVDAVXXXXXXXXXXXXXVSVLRDYQQGREGVQDNGPPSA 1958
A CVDDDNITADIA SCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDL DFSCVDFACVDPNAPCVDDDVTEGMFEDCF+FGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTA CVDDDDVTADALENCMIEYLGDGYCDTYNN EICDYDGGDCCECTCGSDSTDVL GSDCSDFVCIDPTASCFDESITVDMYEYCDVELLGDSIC SNNFEVCDYDFGDCCEATCGVDSS GTLDELSCSSFAC+DPRFVTPSPTP PLSSECLDDPAC DGTRGQSVD+ QERAII+GSIAA IVTVIN+ YL F KKG+ ADEVHC LL+MA+AFSVVEGIS+I LVPDSKE LKIGAVLFFG VAA SG+ LRKSG + +I+NAVLEALFALFVLLFFVEQSTRNIF+FG+ AGNEALVG AI RVGG T EN AEA K EI L EA+GDMLFPL AT VQS+FHRDSAWRS FV TWW I+G A+T+A+CMCF+PP+NRIAFGPK AC S + F+ GIL+FVILTLTEV ITNPPTFDI WSSVSGA+GVL+A C +FE+IR IPD QS+G +V+SL + + VLR Y G E V+DNGP A
Sbjct: 119 AACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAPCVDDDVTEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCMIEYLGDGYCDTYNNNEICDYDGGDCCECTCGSDSTDVLVGSDCSDFVCIDPTASCFDESITVDMYEYCDVELLGDSICQPSNNFEVCDYDFGDCCEATCGVDSS-GTLDELSCSSFACVDPRFVTPSPTPAPLSSECLDDPACVDGTRGQSVDDQDTQERAIIEGSIAAFIVTVINLLYLVFHKKGEEADEVHCSLLMMAYAFSVVEGISVIFLVPDSKEKLKIGAVLFFGVVAAGSGYLLRKSGRDVALSILNAVLEALFALFVLLFFVEQSTRNIFLFGIVAGNEALVGFAIAARVGGTPTGGENEAEATTXXXXXXXXXXSQHEAEAKCEITFSLAEALGDMLFPLIATQVQSWFHRDSAWRSGFVLTWWGISGFASTSAICMCFMPPMNRIAFGPKLACKSLIIFNFSQGILAFVILTLTEVNITNPPTFDIAWSSVSGALGVLFALACCILFEHIRHIPDSQSVGVIVSSLKRELEDIPDGQSRWDVVMRVLRSYYPGGEKVEDNGPSGA 788
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: D8LEX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX5_ECTSI) HSP 1 Score: 614 bits (1584), Expect = 1.740e-210 Identity = 317/491 (64.56%), Postives = 359/491 (73.12%), Query Frame = 3
Query: 258 MFEDCFSFGDGFCNDYNNNEQCGYDGGDCCECTCVVD--WSAEFGCTEFACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDGSDCSDFVCIDPTASCFDESITVDMYEYCDVELLGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSSFACIDPRFVTPSPTPVPLSSECLDDPACEDGTRGQSVDNPGAQERAIIQGSIAAIIVTVINVSYLAFRKKGKGADEVHCYLLLMAFAFSVVEGISIILLVPDSKENLKIGAVLFFGAVAALSGFFLRKSGLYASAAIVNAVLEALFALFVLLFFVEQSTRNIFVFGVTAGNEALVGLAIVVRVGGRSTSDENAAEAKREIFVLLVEAVGDMLFPLTATLVQSFFHRDSAWRSDFVRTWWAITGLANTAALCMCFVPPVNRIAFGPKFACLSQLFFSLVTGILSFVILTLTEVKITNPPTFDIV 1724
MFE CF+FGDGFC+DYNNNEQCGYDGGDCCECTCVV WS E CTEFACIDP A C DDDD+TADA+E+C+I+YLGDG CDT NNIE C YD GDCCECT S CSDF C+DP ASCFDESITVDM+E CD ELLGD C SNN E+CDYDFGDCCE+TCGVD S +LDE +CSSFACIDPRFVT SPTP PLSSEC P+CE+G E A QG I A IVT +N+ YL +K GADEVHCYLLLMA+ F+V EG+ + L+VP+SKENLKIGAV FGAV+ALS F LRK+G + +AAIVNA LE LFA VLL+FV+ STRNIF+FG AGNEALVG AI RV R SD ATL+QS FHRDSAWRSDFV TWW+ITG A T+A+CMC VPPV+R+AFG K ACL+Q FFS TG+++FVILTLTEV I +PPTFDIV
Sbjct: 1 MFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTLWSTESSCTEFACIDPRAPCADDDDITADAVESCIIDYLGDGICDTSNNIETCGYDSGDCCECTXXXXXXXXXXXS-CSDFACVDPMASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDFSE-SLDEFACSSFACIDPRFVTQSPTPAPLSSECPGGPSCEEGML----------ESATNQGLIVAGIVTALNLFYLTCCRKDAGADEVHCYLLLMAYVFAVAEGMCVSLVVPNSKENLKIGAVFLFGAVSALSAFLLRKAGRHVTAAIVNAGLEGLFATVVLLYFVQLSTRNIFLFGAIAGNEALVGFAIAARVDSRPNSDXXXXXXXXXXXXXXXXXXXXXXXXXXATLIQSLFHRDSAWRSDFVFTWWSITGFALTSAICMCLVPPVSRVAFGAKLACLTQFFFSSSTGVMAFVILTLTEVNIADPPTFDIV 479
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI) HSP 1 Score: 555 bits (1431), Expect = 1.460e-190 Identity = 259/279 (92.83%), Postives = 266/279 (95.34%), Query Frame = 3
Query: 102 EANNIEECDYDAGDCCQCTCGIESDDLDDFSCVDFACVDPNAPCVDDDVTEGMFEDCFSFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDGSDCSDFVCIDPTASCFDESITVDMYEYCDVELLGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSSFACIDPRFVTPSPTPVPLSSECLDDPACEDGTRGQSVDNPG 938
EANNIEECDYDAGDCCQCTCGIESDDL DFSCVDFACVDPNAPCVDDDVTEGMFEDCF+FGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTA CVDDDDVTADALENCM+EYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLD CIDPTASCFDE+ITVDMYEYCDVELLGDSIC+LSNNFEVCDYDFGDCCEATCGVDSS GTLDELSCSSFACIDP+FVTP+PTP PLSSECLDDPAC DGTRGQSVD+PG
Sbjct: 3 EANNIEECDYDAGDCCQCTCGIESDDLPDFSCVDFACVDPNAPCVDDDVTEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCMMEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDXXXXXXXXCIDPTASCFDENITVDMYEYCDVELLGDSICNLSNNFEVCDYDFGDCCEATCGVDSS-GTLDELSCSSFACIDPQFVTPAPTPAPLSSECLDDPACVDGTRGQSVDDPG 280
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: A0A6H5L034_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L034_9PHAE) HSP 1 Score: 352 bits (903), Expect = 4.870e-110 Identity = 211/411 (51.34%), Postives = 239/411 (58.15%), Query Frame = 3
Query: 636 FDESITVDMYEYCDVELLGDSICHLSNNFEVC-------DYDFGDCCEATCGVDSSSGTLDELSCSSFACIDPRFVTPSPTPVPLSSECLDDPACEDGTRGQSVDNPGAQERAIIQGSIAAIIVTVINVSYLAFRKKGKGADEVHCYLLLMAFAFSVVEGISIILLVPDSKENLKIGAVLFFGAVAALSGFFLRKSGLYASAAIVNAVLEALFALFVLLFFVEQSTRNIFVFGVTAGNEALVGLAIVVRVGGRSTSDENAAEAKREIFVLLVEAVGDMLFPLTATLVQSFFHRDSAWRSDFVRTWWAITGLANTAALCMCFVPPVNRIAFGPKFACLSQLFFSLVTGILSFVILTLTEVKITNPPTFDIVWSSVSGAVGVLYAKGCWEVFEYIRRIPDGQSIGDVVNSLVD 1847
F SIT DM+E CD ELLG+ C SNN E+C DYDFGDCCE T G DSS +LDE +CSSFA IDP FVT SPT PLSSEC P+C +G G SVD+PG E A QG ADEVHCYLLLMA FSV EG+ ILLVP SKENLKIGAV FGAV+ALS F L +G + +AAIVNAVLE LF L+F + AI RV R PL ATL+Q FHRD AWRS+F TWWAITG A T+A+CMC VPPVNRI FG K ACL+Q FFS TG++SFVI+TLTEV I +PPTFDIVWSSV G +GVL W F+ I+ IPDG S +L D
Sbjct: 2 FRRSITFDMFENCDAELLGNGYCQGSNNNEICGASTRPSDYDFGDCCEPTYGADSSE-SLDEFACSSFARIDPWFVTQSPTSAPLSSECPGGPSCVEGAGGPSVDDPGILESATNQG-----------------------ADEVHCYLLLMANVFSVAEGMCDILLVPSSKENLKIGAVPLFGAVSALSAFRLSNAGRHVTAAIVNAVLEGLFPTPWLVFAIA---------------------AIAARVDSRXXXXXXXXXXXXXXXXXXXXXXXXXXXPLVATLIQPLFHRDGAWRSNFAFTWWAITGFAITSAICMCLVPPVNRIVFGAKLACLTQYFFSSSTGVMSFVIVTLTEVNIADPPTFDIVWSSVVGTLGVLSGYSSWLAFKQIQDIPDGHSFQASAPTLPD 367
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 273 bits (698), Expect = 1.940e-78 Identity = 155/294 (52.72%), Postives = 186/294 (63.27%), Query Frame = 3
Query: 3 ATCVDDDNITADIAGSCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLDDFSCVDFACVDPNAPCVDDD-VTEGMFEDCF---SFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAACVDDDDVTADALENCMIEY---LGDGYCDTYNNIEICDYDGGDCCECTCGSDST-DVLDGSD--CSDFVCIDPTASCFDES-ITVDMYEYCD-VELLGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSS----FACIDPR 836
A CVDDD+ T D+ +C Y G+G+G+C+E NN E C YD GDCC+CTC E + DD+ C +FACVDPNAPCVDDD VT M E+C GDG+C++ N +C YDGGDCC CTC + ++GC FACIDP AACVDDDD+T D ENC EY +G+G+CD NNIE C YDGGDCCECTC +S D D D C +F CIDP+A C D+ ITVDM E C V +G+ C +NN E C YD GDCC TC S D+ SCSS F C DP
Sbjct: 41 APCVDDDSFTVDMIDNCD----YPGGIGDGWCDEDNNNELCAYDGGDCCECTC--EGSEDDDWHCRNFACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVDMFENC--EYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC----ESPYDDDYSCSSEYGSFDCKDPN 322
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 241 bits (616), Expect = 2.420e-69 Identity = 141/275 (51.27%), Postives = 168/275 (61.09%), Query Frame = 3
Query: 3 ATCVDDDNITADIAGSCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLDDFSCV-DFACVDPNAPCVDDD-VTEGMFEDCF---SFGDGFCNDYNNNEQCGYDGGDCCECTCV-------VDWSAEFGCTE-FACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDGSDC---SDFVCIDPTASCFDE-SITVDMYEYCDVE-LLGDSICHLSNNFEVCDYDFGDCCEATCGV 773
A CVDDD+IT + A +C + G+G+C++ NN E C YD GDCC+CTC DD D+SC + AC+DP+APCVDDD VT M E+C S G+G+C++ NNNE CGYDGGDCCECTC D + GC FACIDP A CV+DDD+T D +ENC +G+G+CD NN E C YDGGDCCECTC +C S F CIDP A C DE S TVDM E C G+ C NN E C YD GDCCE TC V
Sbjct: 40 APCVDDDDITIEQALNC-----FPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDD--DYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQ-----ECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTCEV 302
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 253 bits (646), Expect = 5.850e-69 Identity = 151/308 (49.03%), Postives = 189/308 (61.36%), Query Frame = 3
Query: 3 ATCVDDDNITADIAGSCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIES-------DDLDDFSCVD----FACVDPNAPCV-DDDVTEGMFEDCF---SFGDGFCNDYNNNEQCGYDGGDCCECTCVV-----DWSAE-----FGCTE--FACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDGSDCSDFVCIDPTASCFDE-SITVDMYEYCDVEL-LGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSC-SSFACIDPR 836
A+CVDDD+IT ++A +C + LG+GYC++ NN E C YD GDCC+CTC DD DD+ C FAC+DP APCV DDD+T M E+C GDG+C++ NNNE CGYDGGDCCECTCV DW +G FACIDP+AACVDDD+VT +E+C +GDGYC+ NN E C YDGGDCCECTC D+ + G S F CIDP A C D+ S TVDM + C+ +G+ C + NN E+C YD GDCCE TC S D+ +C ++FAC+DP
Sbjct: 38 ASCVDDDDITIEMAQNCD-----TSELGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTC-EDTPNNRCGR-WSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTC----ESLEDDDWACRNNFACVDPN 334
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 244 bits (624), Expect = 7.820e-67 Identity = 155/319 (48.59%), Postives = 185/319 (57.99%), Query Frame = 3
Query: 3 ATCVDDDNITADIAGSCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDL-DDFS-CVD---FACVDPNAPCVDDD-----VTEGMFEDC----FSFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTC---GSDSTDVLDGSDCSD---FVCIDPTASCF-DESITVDMYEYCDVELL--GDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSSFACIDPRFVTPSPTPVPLSSECLDD 890
A CVDDD+I + +C D +G+G C++ NN EECDYD GDCC CTC + D DD S C + FAC+DP+APCV+DD + E + E C DG C+ NNNE+CGYDGGDCC CTC+ D+ E G FACIDP+A C DDDDVT D +ENC + +GDG CD NN E C YDGGDCC CTC DS D DGS CS+ F CIDP A C D+ ITVDM + C + GD C NN + C YD GDCC TC VD GT E F C+DP S+EC+DD
Sbjct: 82 AECVDDDDIGTETVQNCGD----PWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFY-ECGIRGFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGD--DGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTC-VD---GTY-ECGIVGFDCVDP------------SAECVDD 376
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.620e-63 Identity = 138/290 (47.59%), Postives = 170/290 (58.62%), Query Frame = 3
Query: 27 ITADIAGSCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLDDFSCVD----FACVDPNAPC-VDDDVTEGMFEDC--FSFGDGFCNDYNNNEQCGYDGGDCCECTCVV----DWSAEF--GCTE-FACIDPTAACVDDDDVTADALENCMIEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDGSDCSDFVCIDPTASCFDE-SITVDMYEYCD-VELLGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSS----FACIDPR 836
+++ A S G + A G+GYC NN EC YD GDCC+CTC + C FACVDP+APC +D VT ++C + GDG+C+ NNNE CGYDGGDCCECTC V DW + C E FACIDP+A CV+DDD+T D E+C +GDGYCD NN C YDGGDCCECTC + + G S F CIDP A C D+ S+TVDM + CD + ++G+ C NN E+C YD GDCCE TC S D+ +CSS F C DP
Sbjct: 18 LSSVAANSLSSSGCWDALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAVGMGDGYCDMDNNNAACAYDGGDCCECTC--EPNNKCGGR--SGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTC----ESAWNDDYTCSSEHGTFNCKDPN 299
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 231 bits (589), Expect = 4.120e-62 Identity = 139/317 (43.85%), Postives = 172/317 (54.26%), Query Frame = 3
Query: 78 GLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLDDFSC----VDFACVDPNAPCVDDD-VTEGMFEDCFS--FGDGFCNDYNNNEQCGYDGGDCCECTCVV-----DWSAEFGCTEFACIDPTAACVDDDDVTADALENC-MIEYLGDGYCDTYNNIEICDYDGGDCCECTC----GSDSTDVLD-------------GSDCSDFVCIDPTASCF-DESITV--------------------------------DMYEYCDVEL-LGDSICHLSNNFEVCDYDFGDCCEATCGVDSSSGTLDELSCSSFACIDPR 836
G G+GYC NN EC YD GDCC+CTC D D++ C FAC+DP+APCVDDD +T + ++C + G+G+C++ NNNE CGYD GDCCECTCV DW + FACIDP A CVDDDDVT D +ENC + LGDG+CD +NN E+C YDGGDCCECTC +D D G+ F CIDP A+C D+ ITV DM E C+ +GD C+ NN E+C YD GDCC TC D D+ +C++FACIDP
Sbjct: 28 GFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFD----DDWACTTFACIDPE 340 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1141.933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1141.933.1 >prot_E-siliculosus-1a_F_contig1141.933.1 ID=prot_E-siliculosus-1a_F_contig1141.933.1|Name=mRNA_E-siliculosus-1a_F_contig1141.933.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=568bp MFEDCFSFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIback to top mRNA from alignment at E-siliculosus-1a_F_contig1141:12475..17594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1141.933.1 ID=mRNA_E-siliculosus-1a_F_contig1141.933.1|Name=mRNA_E-siliculosus-1a_F_contig1141.933.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5120bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1141:12475..17594+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1141:12475..17594+ >mRNA_E-siliculosus-1a_F_contig1141.933.1 ID=mRNA_E-siliculosus-1a_F_contig1141.933.1|Name=mRNA_E-siliculosus-1a_F_contig1141.933.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3408bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1141:12475..17594+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |