mRNA_E-siliculosus-1a_F_contig114.925.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: D7FPN4_ECTSI (acidPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN4_ECTSI) HSP 1 Score: 768 bits (1982), Expect = 7.830e-276 Identity = 428/454 (94.27%), Postives = 432/454 (95.15%), Query Frame = 3
Query: 288 EEGGVVGDGKEGGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--QPWLRGLFTVFLVVEALVLYAVNEYSPVYDFEVLSVTTTAEDGTTTVVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPALILLVRGLLLGRMWTLRPTRGLPCLTRAQSKTAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGPRTGASSSAGGDVAKGPSLQAVPPARVAEVDDSARKLDLYA 1643
++GGVVGDGK GG D XXXXXXXXXXXXXXXXXXXXXXXXXXX R QPWLRGLFTVFLVVEALVLYAVNEYSPVYDFEVLSVTTTAEDGTTTVVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPT AALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIP LILLVRGLLLGRMWTLRPTRGLPCLTR QSK AWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAK T G + NYYALLFYTEHTLNGQD+HHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGF VALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAF FAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGG RTGASSSAGGDVAKGPSLQAVPPARVAE DDSARKLDLYA
Sbjct: 2 KKGGVVGDGKGGGRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXRPKRRRRQPWLRGLFTVFLVVEALVLYAVNEYSPVYDFEVLSVTTTAEDGTTTVVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTPAALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPGLILLVRGLLLGRMWTLRPTRGLPCLTRDQSKAAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKGTGGGAKTNYYALLFYTEHTLNGQDYHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGSRTGASSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA 455
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A6H5JPR8_9PHAE (acidPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR8_9PHAE) HSP 1 Score: 696 bits (1795), Expect = 6.010e-249 Identity = 347/358 (96.93%), Postives = 353/358 (98.60%), Query Frame = 3
Query: 570 VVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPALILLVRGLLLGRMWTLRPTRGLPCLTRAQSKTAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGPRTGASSSAGGDVAKGPSLQAVPPARVAEVDDSARKLDLYA 1643
V+GDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISS+VAFC+VVVIP LILLVRGLLLGRMWT+RPTRGLPCLTRAQSKTAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDF HWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGF VALLPMSAIL+GV+RIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGPRTG SSSAGGDVAKGPSLQAVPPARVAE DDSARKLDLYA
Sbjct: 2 VIGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISSIVAFCFVVVIPGLILLVRGLLLGRMWTIRPTRGLPCLTRAQSKTAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFQHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILVGVSRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGPRTGTSSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA 359
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A836CC24_9STRA (acidPPc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC24_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.600e-12 Identity = 55/141 (39.01%), Postives = 75/141 (53.19%), Query Frame = 3
Query: 840 RGLPCLTRAQSKTAWGKKRWHLRVGFFAL---------DAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFHHWSI----TSWPSGHAATAMSGLVFLAYVLWSDL-VALVMWRRRAHPRLSLVLVM 1220
RG P A K WH V F DA++GL A++ ASL + + K+ VGRPRPNYYAL ++ EH++ Q H + TSW SGH++ +++G++FL VLW D+ V LV W R L LV M
Sbjct: 307 RGRPAAA-ADGANGNSKPDWHTLVCFSRRVRLSADAHWDAWIGLLASLAMASLMTELTKLLVGRPRPNYYALKYFGEHSVVDQGSIHDATRSANTSWVSGHSSLSLAGVLFLTLVLWRDVSVWLVRWGRPHRSWLPLVTAM 446
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A835ZFV7_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.700e-10 Identity = 55/142 (38.73%), Postives = 71/142 (50.00%), Query Frame = 3
Query: 948 AAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHT----------LNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALV--MWRRRAHPRLSLVLVMLGGFAVALLPMS-AILIGVTRIREYWHRPDDVLVGFIMG 1334
A V A+LF K VGRPRPNY AL+ + L G TS+PS H++ AM+ F A V+W D V +W R L G VALL M+ AI +G+TRI++YWH PDDV G+ +G
Sbjct: 2 ACVSIATLF---IKKGVGRPRPNYAALVEVVAQSPALAAGSAGALGGHPR-----TSFPSAHSSHAMAAFGFFALVVWGDAARRVGPLWARN-----------LAGM-VALLSMACAIWVGMTRIQDYWHHPDDVFAGWALG 123
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A2S6CGW1_9PEZI (acidPPc domain-containing protein n=5 Tax=Cercospora TaxID=29002 RepID=A0A2S6CGW1_9PEZI) HSP 1 Score: 69.3 bits (168), Expect = 3.160e-9 Identity = 53/152 (34.87%), Postives = 79/152 (51.97%), Query Frame = 3
Query: 933 FLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDF---------HHWSITSW---PSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLPM-SAILIGVTRIREYWHRPDDVLVGFIMGFAAAH 1349
FLGLF+A++ A++ + + K +GRPRP+ A E T + HH W PSGH++ A SGL ++A ++ S L L PR SL++V+ LLP+ A LI V+R+ +Y H DV+ G I+GFA +
Sbjct: 109 FLGLFSAILMATMITDILKDAIGRPRPDLIARCKPAEGTPRNEMISVEVCTETNHHVLHDGWRSYPSGHSSFAFSGLGWIALLMASQLHVL-------RPRASLIVVL-----ACLLPLLGAALIAVSRLEDYRHDVFDVVSGSILGFAVTY 248
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A2DYB5_TRIVA (PAP2 superfamily protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DYB5_TRIVA) HSP 1 Score: 68.2 bits (165), Expect = 5.180e-9 Identity = 54/148 (36.49%), Postives = 73/148 (49.32%), Query Frame = 3
Query: 933 FLGLFAAVVTASLFS-TVAKVTVGRPRPNYYALLFYTEHT---------LNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAA 1346
FL F A S F+ ++ K VGR RP+ Y++ E L+ +F SWPSGH+ TAMSG V +A+ + +R +LV G F +L + AI G TRIR+Y HRPDDVL GF +G+ A
Sbjct: 98 FLWAFVAAEGISGFTVSIFKNYVGRTRPDLYSICGSQEINPSDPSTCPGLSASEFKD-QFRSWPSGHSQTAMSGFVIIAFFV-----------QRIIKSKNLV----GTFCGSLFIILAIWCGATRIRDYKHRPDDVLAGFFVGYIFA 229
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A2I0JX14_PUNGR (acidPPc domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JX14_PUNGR) HSP 1 Score: 66.6 bits (161), Expect = 1.460e-8 Identity = 49/172 (28.49%), Postives = 80/172 (46.51%), Query Frame = 3
Query: 930 AFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLF----------------YTEHTLNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLP-MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEI 1394
A LGL AV ++ + KV VGRPRPN++ F Y + + + + S+PSGH + + +GLVFL++ + + A + H + + LP ++AIL+GV+R+ +YWH DV G I+G + F + PF H++
Sbjct: 99 ATLGLLYAVGLTAVITDAIKVAVGRPRPNFFYRCFPDGEPVFDNVTHDVLCYGDKAVIKEGY-----KSFPSGHTSWSFAGLVFLSWYMSGKIRA---FNHGGH---------VAKLCIVFLPVLAAILVGVSRVDDYWHHWQDVFTGAIIGTVLS--TFCYLQFFPFPHDV 251
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A2C9WGV2_MANES (acidPPc domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WGV2_MANES) HSP 1 Score: 65.5 bits (158), Expect = 6.150e-8 Identity = 49/166 (29.52%), Postives = 80/166 (48.19%), Query Frame = 3
Query: 930 AFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLF---------YTEHTLNGQDFH--HWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLP-MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHE 1391
A LGL +++ + + K VGRPRPN++ F T + D H S+PSGH++ + +GL FLA+ + L ++ RR H + + L+P + AIL+G++R+ +YWH DV G ++G A AF + P+ +E
Sbjct: 99 AILGLLFSLLATGVITDAIKDAVGRPRPNFFWRCFPDGKAAFDPVTYDVICHGDAHIIKEGYKSFPSGHSSWSFAGLTFLAWYMSGKL---RVFDRRGH---------VAKLCIVLIPVLIAILVGISRVDDYWHHWTDVFAGALIGTIVA--AFCYLQFFPYPYE 250
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: A0A7J7CKD5_TRIWF (Lipid phosphate phosphatase 2-like isoform X1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CKD5_TRIWF) HSP 1 Score: 65.1 bits (157), Expect = 8.460e-8 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 3
Query: 930 AFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLF------YTEHTLNGQDFHHWSIT-----SWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLP-MSAILIGVTRIREYWHRPDDVLVGFIMGFA 1340
A LG+ +V+ + + K VGRPRPN++ F + E + N + +I S+PSGH + + +GL FLA+ + + A + RR H + + LLP ++A+L+GV+R+ +YWH DV G ++G+A
Sbjct: 99 ALLGILYSVLITGVITDAIKDAVGRPRPNFFWRCFPDGNGVFDEISGNVACYGDPAIIKEGYKSFPSGHTSWSFAGLTFLAWYIAGKIKA---FDRRGH---------VAKLCIVLLPILAAVLVGVSRVDDYWHHWTDVFAGALIGWA 235
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Match: UPI0018F81A5E (lipid phosphate phosphatase 2-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F81A5E) HSP 1 Score: 65.1 bits (157), Expect = 8.760e-8 Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 3
Query: 930 AFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLF------YTEHTLNGQDFHHWSIT-----SWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFAVALLP-MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEI 1394
A LG+ +V+ + + K VGRPRPN++ F + E + N + +I S+PSGH + + +GL FLA+ + + A + RR H + + LLP ++A+L+GV+R+ +YWH DV G ++G A A + PF + +
Sbjct: 99 ALLGILYSVLITGVITDAIKDAVGRPRPNFFWRCFPDGNGVFDEISGNVACYGDPAIIKEGYKSFPSGHTSWSFAGLTFLAWYIAGKIKA---FDRRGH---------VAKLCIVLLPILAAVLVGVSRVDDYWHHWTDVFAGALIGTMVA--ALCYLQFFPFPNHV 251 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig114.925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig114.925.1 >prot_E-siliculosus-1a_F_contig114.925.1 ID=prot_E-siliculosus-1a_F_contig114.925.1|Name=mRNA_E-siliculosus-1a_F_contig114.925.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=466bp MGYRRGHSRTGSDEEGGVVGDGKEGGTDAAAAAAAAANGGASGAEDSDSSback to top mRNA from alignment at E-siliculosus-1a_F_contig114:58088..68651- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig114.925.1 ID=mRNA_E-siliculosus-1a_F_contig114.925.1|Name=mRNA_E-siliculosus-1a_F_contig114.925.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10564bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig114:58088..68651- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig114:58088..68651- >mRNA_E-siliculosus-1a_F_contig114.925.1 ID=mRNA_E-siliculosus-1a_F_contig114.925.1|Name=mRNA_E-siliculosus-1a_F_contig114.925.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2796bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig114:58088..68651- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |