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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 1008 |
| Model size | 2649 |
| Exons | 3 |
| Ec32 ortholog | Ec-16_001350.1 |
| Ec32 ortholog description | hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig114.922.1 >prot_E-siliculosus-1a_F_contig114.922.1 ID=prot_E-siliculosus-1a_F_contig114.922.1|Name=mRNA_E-siliculosus-1a_F_contig114.922.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=336bp
MALDRFLHHEIEPAAQRIIDAAVLDHTEACRLLDGKPVPAFAGGGGGAQA
ASSKHQQEGRGGSRGGSKPPIVSSNNDIRSDPVEAAAAAAAAAAAAVGDD
DVGVATGKAPGTAPATATAPAAAVSGARGNANPTEPRQRAKRVGVIQPPP
PPSSTSVRASLPVKGRQGATGGAFDRPRIIDFTGGGGSGGSYSARSKTLP
GRRRLLVEDNSRKKEFQEKERGGGHRGGSSGSRGERAVAAGSGGFAGDDV
LAGAASCGRRERQIGGGGGGVAAAAAAAAAARRSDYLEEEDDDVWDAPLP
GRLRATDISAKIVGLSSEIRRRAAAEAGREGHRKQ* back to topmRNA from alignment at E-siliculosus-1a_F_contig114:20465..24692- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig114.922.1 ID=mRNA_E-siliculosus-1a_F_contig114.922.1|Name=mRNA_E-siliculosus-1a_F_contig114.922.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4228bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig114:20465..24692- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGGGAGCAAGCGGTTTCCCAGAGGGAGAGAAGGTTCTTGAAGAGCGTCG
AAAAGGTGTGCGGGGCGACAAACAAATGAGCGCGCTCTGTAGCTTTTCGA
GAGAGGACAAGCCGCCGTAAACAATTTCTTGAGAGTGCAGCAGTAGGAGC
CTCGCCTTTCTTCGCGTAGTTATGCCCACGCACCACACACCCGATTGTTG
AATATCACCTCTGCTGCTGCTGTGTTGATGTTGCAGCAGCCGTTTACAGG
AAGTCGTCGGCGGATATCTCCTAAACTACAGGCAACTGTGTACCCCCAGA
GCCCCCCCAAAGGCTCGAAATTTCCAAACGGAATATTACGCATGCATCCT
ATGAAAATAAATCCAAACGGTCAGCCCTGCTGGCTCTCGGTGGCGTTCAC
CGAAGCATCCTCAAGCAGGGTCTAGGCAAGGATTGTTGCTACAAGCGCAC
ACACGGCACGGCGGCGTGAGAAAAGAGAATCTTAAAGAATATCCGCCGTC
CGCCCCCATGTCCCCATGTGCAATCTCAATATGTGTTCCGCCTGCTGTGT
CCTGCTGTCGTCCTGCTGTCGGGGATTTGTCGCGCGCAGCAAGCTGCGTG
TTGGTTGGTAGATCTACACTCTACACACAAACAAACAATCTTGACCCCAT
GGTCTCGCGCAAATAGCGGTTTGTTTTGAAGGGGACCGTCGAGACTTTCT
GTGTAAATAATGTAGCCTCTGAAGCTGCTCACGTGGTCTGGATTGATTGA
TTGTTGACCACCGCAACGCATGCATGCAGACCGCATGCTCACGAGCCTCT
GTGCGGAGTGACTGGACGACACCGGTCCGCCCTGTTTCTTCCAGGCCCCA
CGGTTGAGTTCCACGGGTTTTCACGAGGCGCTACTTGCAGCCGCCGCCAC
CACTGCTGCTGCTGTTGCTTCTGCTGCTGCTGCTGCTGCTGCGCACCGTG
GGCGCACGTTTTGAACCTCTTTCGCGAGCAATGTCCGCCTCGCGATGTTT
TGTTCATTCGCCATGCATGTATTTGTTTTTAATGTCATTTGTGTCAGTCT
CAGCAATAGTTATTGACACAGCTTCATACGTTCGGGCGCGTTTGCCTTCC
CTCCTCCCCCCCCGCTTGAACTATGAATACGATTCTCGTGCAGGGGCTCC
GCGACGTGCGAGGAAAAGCCATGGCCCTGGATCGCTTCCTGCACCACGAA
ATCGAGCCGGCCGCCCAACGTATTATCGACGCGGCCGTGTTGGATCACAC
GGAAGCCTGCCGCCTCCTGGATGGAAAGCCCGTGCCGGCTTTCGCCGGCG
GCGGCGGCGGCGCACAAGCCGCCTCCTCCAAACACCAGCAGGAGGGCCGG
GGGGGTTCAAGAGGAGGGAGCAAGCCGCCCATCGTCAGTAGCAACAACGA
CATTCGGAGCGACCCCGTAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGTAGGAGATGACGACGTCGGCGTTGCGACGGGCAAGGCTCCA
GGCACTGCACCTGCGACCGCAACAGCGCCGGCGGCTGCAGTGTCGGGGGC
GAGGGGTAATGCTAACCCTACCGAGCCGCGGCAACGGGCAAAGAGGGTCG
GGGTGATCCAGCCGCCGCCGCCGCCGTCGTCGACCAGCGTGCGCGCTAGC
TTGCCGGTGAAGGGAAGGCAGGGCGCCACCGGTGGTGCGTTCGATCGTCC
TCGCATCATCGATTTCACCGGCGGCGGTGGTAGTGGCGGCAGTTACAGTG
CTCGCTCGAAGACCTTGCCCGGTAGGCGCCGCCTCCTCGTTGAAGACAAC
TCCAGGAAAAAGGAGTTCCAGGAGAAGGAGAGGGGAGGGGGGCACAGGGG
TGGATCTAGCGGTTCGCGAGGAGAGCGGGCGGTGGCTGCGGGTTCTGGTG
GCTTTGCCGGCGACGACGTCCTGGCGGGAGCGGCGTCATGTGGACGAAGG
GAGAGGCAGATAGGCGGTGGCGGCGGCGGTGTTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTAGGAGGAGTGACTACCTCGAGGAGGAAGACGATGACG
TGTGGGATGCGCCGCTTCCTGGCAGGCTGGTGAGAAAAAAAACACGTTTT
GGGGGAGTTGGGTGTGCGGAAGGGGTCATGCCACGTTTCGCGTGTCTTTG
GAAGTACTACGCCCCGACATGAATCAATCGAGACGACTTGAGCACCGGCA
CGGATTCCAGGCAGCTGCGGTACGTGTTACGACAGAAGGCCACCGGTGAA
CCGTTCTCTTCCATATAGAACAACATCAGTGTTTCCAAGTCAGTTATTGT
TTCCTTACAACGTGGGAGAAACCAGTGGCATCACCTCCCGCGGGTCGGTG
TCGGCTACCCTCCCATACTCCTTTCTTTTATCGGGGAGAAGCTCTTCTCT
CTCATCCCTTGCTGTTGTCGCAGCTGAGAACCCTCTTAAAAGACCATTCG
AAGTCTCAAGTCTCCCTGTTGTGGCTGTATCCATCGGCCACTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTTG
CCGCAAAACTCGTTTCATAGCGTGCGACCGATATCAGCGCCAAGATCGTG
GGACTGTCATCCGAGATCAGGCGCCGGGCAGCAGCCGAGGCCGGAAGAGA
AGGCCATCGCAAGCAGTAGCGGCACCGCGGTGTTGCGGTCACGGCGGAAG
GAGGAGGGTAAACTTGGGTGCTTCTGGAACACCGTGTGCTTTAAGGGCAG
CCTGCCGGAGAGGCTTTTGGGCTCGCAACGGGCGACGTGTTGCACACAGC
AGCAGCACAGAAGCAGCAGAAGTAGCACATCGCGGTGTGTAGAGCCTTCC
GTTCGAGGGCTGCAGTCAGCCGGCAAACGGAACAGCCTCTTACATTACGG
ACAATCGAATCGCTTGGAATCGAATCGGTCCCAAATGGACGGACGAACCG
AAGTGACGCACGCGGCGCGATTGAGGCGACGGTCGATAGACCGCGGGCTT
GTTGAGCCCGAGAGGAGAAAGCGCAAGCCAGCTCAATCTGAAGTGTTGGT
GGCACGCATGCTACCAAGAGCGCTGTTGCCGTGGCGCCTTGATGTCCGCA
CGCAGGCAAAAAGAGTGACAGGTGCGTGGCTTTTGTTTTCCCTGCTGTGA
CAAGGTGAATTCCTGTGGAAGCTGCCGTTCGTCTGCGATAGATATAGGCT
TGACATGTTTTCCAAGAGGCCTCTTTGCCTCGTGCATCGAACATGTATGT
GCGTTTGGAAGCATGCACCGCTTGCTTTTTCGCGTTTGGCTCGGGGGAAC
ACTTGTATTTTTGGCGCTGAGGCGTGGTGCTCCGGGGGGGAGGGGCCATC
AACTGCCTCCGCGTGCTCTGTAAAGTTAGTAGTTAGCACCATAGGGTGTG
TTGCATGAGTTTCGGGGGCGTGAGTTGTTTGTTCTGTGTACTGTGGAACG
GTCCGTAGCTGTTGCCCTGGTAAATTTGAAACCTTCGGAGTGTTCGTGTT
TTGATATCATCGTGATGTTAGTGTCATCGAAGGAAGCCCAGCAGCCCTCC
GCAGAAGCAAGGCTGGTGTGTTTTGTTTCTAATTCTGCTGTTCTTCGTTG
TTTTCTCTTCGCAAAAGCACGCATGTTACACCAACAATTATATTGTACGG
TGTAGCTCGCGAATTGTTTTTGCTTTGGTTTTCTGTGGAAGGTGAAGTAT
GATAGTATTGTTTTTATGAAGAGAGCACGGCACACGTTGTTTTTCATGTG
GTGTTGCCCGTGCTTATGTCTCGCGTTGCGTCTTTCAGCATGGTGTGTTC
GTTGGTTCTGGTTCTCTGAGACGTGACGAGGGGCACGTCTCGTGGCCCGG
GCTTGCTTTCCCTGCATTTTTTTGTGCGTTGTTTCGTGAACAGTTTTTTG
TGCATGTCGCCGGTTGTCTACCTTCCCGTAAAGTTCGATCTAACAATGAT
GGGTTGGATAGCCCTTGTTTTCTAGTACCTCCTGTCGTATTTCCTTGTGG
TAGAGGAACAAAGCAGGGGTGGTACATCGGTCTTCCGCTGTACTTTTGTT
ATGTATTTTTCTGCTTGTCTTCCGAGCCTGTTTTTTTGTTTTTAGTTTTG
TTTTTCTGCTTGCTCTACCACAGTGTCGTGATTGGTGGGGACGGTCCGGT
TCTGTTTGTGAAATATTTATGCTCTGATCTGTGGGTGTAAGGCGTCTTTT
TGTAGACTGCGGGGTCGGGTGAGATAGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig114:20465..24692- >mRNA_E-siliculosus-1a_F_contig114.922.1 ID=mRNA_E-siliculosus-1a_F_contig114.922.1|Name=mRNA_E-siliculosus-1a_F_contig114.922.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig114:20465..24692- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCCTGGATCGCTTCCTGCACCACGAAATCGAGCCGGCCGCCCAACG
TATTATCGACGCGGCCGTGTTGGATCACACGGAAGCCTGCCGCCTCCTGG
ATGGAAAGCCCGTGCCGGCTTTCGCCGGCGGCGGCGGCGGCGCACAAGCC
GCCTCCTCCAAACACCAGCAGGAGGGCCGGGGGGGTTCAAGAGGAGGGAG
CAAGCCGCCCATCGTCAGTAGCAACAACGACATTCGGAGCGACCCCGTAG
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGGAGATGAC
GACGTCGGCGTTGCGACGGGCAAGGCTCCAGGCACTGCACCTGCGACCGC
AACAGCGCCGGCGGCTGCAGTGTCGGGGGCGAGGGGTAATGCTAACCCTA
CCGAGCCGCGGCAACGGGCAAAGAGGGTCGGGGTGATCCAGCCGCCGCCG
CCGCCGTCGTCGACCAGCGTGCGCGCTAGCTTGCCGGTGAAGGGAAGGCA
GGGCGCCACCGGTGGTGCGTTCGATCGTCCTCGCATCATCGATTTCACCG
GCGGCGGTGGTAGTGGCGGCAGTTACAGTGCTCGCTCGAAGACCTTGCCC
GGTAGGCGCCGCCTCCTCGTTGAAGACAACTCCAGGAAAAAGGAGTTCCA
GGAGAAGGAGAGGGGAGGGGGGCACAGGGGTGGATCTAGCGGTTCGCGAG
GAGAGCGGGCGGTGGCTGCGGGTTCTGGTGGCTTTGCCGGCGACGACGTC
CTGGCGGGAGCGGCGTCATGTGGACGAAGGGAGAGGCAGATAGGCGGTGG
CGGCGGCGGTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAGGAGGA
GTGACTACCTCGAGGAGGAAGACGATGACGTGTGGGATGCGCCGCTTCCT
GGCAGGCTGATGGCCCTGGATCGCTTCCTGCACCACGAAATCGAGCCGGC
CGCCCAACGTATTATCGACGCGGCCGTGTTGGATCACACGGAAGCCTGCC
GCCTCCTGGATGGAAAGCCCGTGCCGGCTTTCGCCGGCGGCGGCGGCGGC
GCACAAGCCGCCTCCTCCAAACACCAGCAGGAGGGCCGGGGGGGTTCAAG
AGGAGGGAGCAAGCCGCCCATCGTCAGTAGCAACAACGACATTCGGAGCG
ACCCCGTAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTA
GGAGATGACGACGTCGGCGTTGCGACGGGCAAGGCTCCAGGCACTGCACC
TGCGACCGCAACAGCGCCGGCGGCTGCAGTGTCGGGGGCGAGGGGTAATG
CTAACCCTACCGAGCCGCGGCAACGGGCAAAGAGGGTCGGGGTGATCCAG
CCGCCGCCGCCGCCGTCGTCGACCAGCGTGCGCGCTAGCTTGCCGGTGAA
GGGAAGGCAGGGCGCCACCGGTGGTGCGTTCGATCGTCCTCGCATCATCG
ATTTCACCGGCGGCGGTGGTAGTGGCGGCAGTTACAGTGCTCGCTCGAAG
ACCTTGCCCGGTAGGCGCCGCCTCCTCGTTGAAGACAACTCCAGGAAAAA
GGAGTTCCAGGAGAAGGAGAGGGGAGGGGGGCACAGGGGTGGATCTAGCG
GTTCGCGAGGAGAGCGGGCGGTGGCTGCGGGTTCTGGTGGCTTTGCCGGC
GACGACGTCCTGGCGGGAGCGGCGTCATGTGGACGAAGGGAGAGGCAGAT
AGGCGGTGGCGGCGGCGGTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTAGGAGGAGTGACTACCTCGAGGAGGAAGACGATGACGTGTGGGATGCG
CCGCTTCCTGGCAGGCTGCGTGCGACCGATATCAGCGCCAAGATCGTGGG
ACTGTCATCCGAGATCAGGCGCCGGGCAGCAGCCGAGGCCGGAAGAGAAG
GCCATCGCAAGCAGTAGCGTGCGACCGATATCAGCGCCAAGATCGTGGGA
CTGTCATCCGAGATCAGGCGCCGGGCAGCAGCCGAGGCCGGAAGAGAAGG
CCATCGCAAGCAGTAG back to top
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