mRNA_E-siliculosus-1a_F_contig11370.907.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig11370.907.1
Unique NamemRNA_E-siliculosus-1a_F_contig11370.907.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A0F9VQM6_9ZZZZ (Histidine kinase n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9VQM6_9ZZZZ)

HSP 1 Score: 873 bits (2255), Expect = 2.910e-311
Identity = 443/519 (85.36%), Postives = 478/519 (92.10%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPALISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQAINTSL-PLQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRNQ 1554
            IHQVLNNLISNALKFTHEG+VIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELF+AFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISV SELG GT FSFTLPMLA+ A+ERP EI L+NPN+RLYE HAPTRH+LEHLLQRWEA PI FDS E+EQLL+LGLEHSDFTPERQ HWQT+IDQTPCP L+L N NSFDLP+LRLTHGGETLYKPFSRAQLVASL+QLLIPA IPLK + ELP+L SQQALKLLIVDDNA NRELL+A+LETP IHITTV SG QALEFA+SN+AD+VLMDIRMPGMDGVQTTQALRRL + W RCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDE+QL++LL+RFL V+N+    S+ P Q N LTS++++YA+TSPA LPVIDLEIGARLAGGKE LAREQLKRLIDG DESE HMRNAF QQ LPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRP+LL+ Q
Sbjct:  389 IHQVLNNLISNALKFTHEGDVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFNAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVASELGTGTTFSFTLPMLAHKANERPPEISLSNPNVRLYEEHAPTRHLLEHLLQRWEAIPITFDSPEQEQLLLLGLEHSDFTPERQHHWQTIIDQTPCPALILANGNSFDLPSLRLTHGGETLYKPFSRAQLVASLKQLLIPAFIPLKRNSELPSLASQQALKLLIVDDNASNRELLKAMLETPHIHITTVESGQQALEFARSNSADLVLMDIRMPGMDGVQTTQALRRLGNAWVRCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDESQLNKLLSRFLAVNNRVTPPSIAPPQKNVLTSHSITYANTSPAPLPVIDLEIGARLAGGKEYLAREQLKRLIDGLDESEQHMRNAFAQQKLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPLLLKTQ 907          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A1A9R9E6_9GAMM (Histidine kinase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9R9E6_9GAMM)

HSP 1 Score: 816 bits (2107), Expect = 1.270e-288
Identity = 419/520 (80.58%), Postives = 456/520 (87.69%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPAL-ISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQAI--NTSLPLQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRN 1551
            IHQVLNNLI NALKFTHEGEVIVRVMLDN EGQHVVLN+SVSDTGIGLSDAHQ+ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+S+LGKGT FSFTLPMLA+ A ERP EI LANP IRLYE HAPTRHVLEHLLQRWEA PIAFD+SE  +LLILGLEHSDF+PE   HWQTVIDQTPCP LVL N NSFDLP L LTHGGETLYKPFSRAQLVASL+QLL+PA +P K D EL AL  + Q+LKLLIVDDNAPNRELL+++LE   +H+ T  SG QALEFA+++N DMVLMDIRMP MDGVQTTQALRRL STWARCPIIAVTAHVLSSERQ+WLAEGLDDVLIKPIDEAQLDQLL RFLG++++    N ++       ++NN  ++H +PATLPV+DLEIGARLAGGKE LAREQLKRLID  DESE HMR AF Q+NLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGL HVEGLLEDLYRAMARLRA RP+LLR+
Sbjct:  402 IHQVLNNLIGNALKFTHEGEVIVRVMLDNLEGQHVVLNISVSDTGIGLSDAHQEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIEVKSKLGKGTTFSFTLPMLAHKAIERPPEISLANPTIRLYETHAPTRHVLEHLLQRWEAQPIAFDASEPARLLILGLEHSDFSPEWHSHWQTVIDQTPCPTLVLANGNSFDLPPLHLTHGGETLYKPFSRAQLVASLKQLLLPALLPNKSDQELLALPAASQSLKLLIVDDNAPNRELLKSMLEDSTLHVITAESGRQALEFARNSNVDMVLMDIRMPEMDGVQTTQALRRLSSTWARCPIIAVTAHVLSSERQQWLAEGLDDVLIKPIDEAQLDQLLKRFLGITHRLATSNATMSYLQRESSTNNPRFSHETPATLPVVDLEIGARLAGGKEYLAREQLKRLIDSLDESEQHMRAAFAQKNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLDHVEGLLEDLYRAMARLRAHRPLLLRH 921          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A2G2KMI0_HALSX (Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepID=A0A2G2KMI0_HALSX)

HSP 1 Score: 803 bits (2075), Expect = 9.300e-284
Identity = 417/521 (80.04%), Postives = 451/521 (86.56%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPALISQ-QALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQ--AINTSLP-LQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRN 1551
            IHQVLNNLI NALKFTHEGEVIVRVMLDN EGQHVVLNLSVSDTGIGLSDAH++ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+SELGKGT FSFTLPMLA+ A ERP EI LANP IRLYE HAPTRHVLEHLLQRWEA PIAFD+ E   L+ILGLEHSDF+ E   HWQ VIDQ  CP L+L N NSFDLP L LTHGGE LYKPFSRAQLVASL+QLL+PA +P K D E  AL +  Q LKLLIVDDNAPNRELL+++LE P +H+ T+ S  QALEFA++ N DMVLMDIRMPGMDGVQTTQALRR+ STWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGV+++  A + + P LQ +  T+N   ++H  PATLPV+DLEIGARLAGGKE LAREQLKRLID  DESE HMR AF QQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGL HVEGLL+DLYRAMARLRA RP+LLR+
Sbjct:  402 IHQVLNNLIGNALKFTHEGEVIVRVMLDNLEGQHVVLNLSVSDTGIGLSDAHKEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIDVESELGKGTTFSFTLPMLAHKAIERPPEISLANPTIRLYETHAPTRHVLEHLLQRWEAQPIAFDAPEPAGLMILGLEHSDFSSEWHSHWQEVIDQATCPTLILANGNSFDLPALHLTHGGEILYKPFSRAQLVASLKQLLLPALMPNKSDQEPLALTAAPQPLKLLIVDDNAPNRELLKSMLEDPTLHVITLESXHQALEFARTGNVDMVLMDIRMPGMDGVQTTQALRRVSSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVTHRLTASSATTPYLQRDNNTTNKQPFSHAPPATLPVVDLEIGARLAGGKEYLAREQLKRLIDSLDESEQHMRAAFAQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLDHVEGLLDDLYRAMARLRAHRPLLLRH 922          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A246RW75_9GAMM (Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepID=A0A246RW75_9GAMM)

HSP 1 Score: 800 bits (2065), Expect = 2.670e-282
Identity = 414/521 (79.46%), Postives = 452/521 (86.76%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPAL-ISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQAINTSL---PLQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRN 1551
            IHQVLNNLI NALKFTHEGEVIVRVMLDN EGQHVVLNLSVSDTGIGLS+AH++ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+SELGKGT FSFTLPMLA+ A ERP E+ L NP IRLYE HAPTRHVLEHLLQRWEA PIAFD++E  +L+ILGLEHSDF+PE   HWQTVIDQTP P L+L N NSFDLP L LTHGGE LYKPFSRAQLVA+L+QLL+PA +  K   EL AL  + Q LKLLIVDDNAPNRELL+++L  P + + TV SG QALEFA ++N DMVLMDIRMPGMDGVQTTQALRRL STWARCPIIAVTAHVLSSERQ+WLAEGLDDVLIKPIDE QLDQLLNRFLGV+++  ++S    P Q ++  +N   ++HT PATLPVIDLEIGARLAGGKE LAREQLKRLID  DESE HMR AF QQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGL HVEGLLE+LYRAMARLR QRP+LLR+
Sbjct:  398 IHQVLNNLIGNALKFTHEGEVIVRVMLDNLEGQHVVLNLSVSDTGIGLSEAHKEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIEVESELGKGTTFSFTLPMLAHQAIERPPEVHLDNPTIRLYETHAPTRHVLEHLLQRWEAHPIAFDAAEPAKLMILGLEHSDFSPEWHSHWQTVIDQTPYPTLILANGNSFDLPPLHLTHGGEILYKPFSRAQLVATLKQLLLPALMAHKDGQELLALPAAPQPLKLLIVDDNAPNRELLKSMLADPTLQVITVESGHQALEFAHTSNVDMVLMDIRMPGMDGVQTTQALRRLSSTWARCPIIAVTAHVLSSERQQWLAEGLDDVLIKPIDEKQLDQLLNRFLGVTHRLTSSSATAPPSQRDSNAANTQRFSHTPPATLPVIDLEIGARLAGGKEFLAREQLKRLIDSLDESEQHMRAAFIQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLDHVEGLLEELYRAMARLRTQRPLLLRH 918          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A265DXB5_9GAMM (Histidine kinase n=2 Tax=Halomonas TaxID=2745 RepID=A0A265DXB5_9GAMM)

HSP 1 Score: 795 bits (2054), Expect = 1.670e-280
Identity = 410/521 (78.69%), Postives = 453/521 (86.95%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPAL-ISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQ-AINTSLP--LQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRN 1551
            IHQVLNNLI NALKFTHEGEVIVRVMLDN EGQHVVLNLSVSDTGIGLS+AH++ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+SELGKGT FSFTLPMLA+ A ERP EI LA+P +RLYE HAPTRHVLEHLLQRWEA PIAFD+SE  +L+ILGLEHSDF+PE   HWQTVIDQTP P L+L N NSFDLP L LTHGGETLYKPFSRAQLVASL+QLL+P  +P K D  L AL  + Q LKLLIVDDNAPNRELL+++LE P +H+ T  SG QALEFA++ NADMVLMDIRMPGMDGVQTTQALRR+ STWARCPIIAVTAHVLSSERQ+WLAEGLDDVLIKPIDEAQL+QLLNRF+GV+++    +++P   Q ++        +HT+P+TLPV+DLEIGARLAGGKE LAREQLKRLID  DESE HMR AF Q+NLPTLLDWVH LNGASRYCGAPELAL+VETLETRLRTSGL HVEGLLEDLYRAM RLRA RP+LLR+
Sbjct:  407 IHQVLNNLIGNALKFTHEGEVIVRVMLDNLEGQHVVLNLSVSDTGIGLSNAHKEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIEVESELGKGTTFSFTLPMLAHKAIERPPEISLAHPTVRLYEIHAPTRHVLEHLLQRWEAQPIAFDASEPAKLMILGLEHSDFSPEWHSHWQTVIDQTPYPTLILANGNSFDLPPLHLTHGGETLYKPFSRAQLVASLKQLLLPELMPDKSDQYLLALPAASQPLKLLIVDDNAPNRELLKSMLEDPTLHVITADSGHQALEFARTGNADMVLMDIRMPGMDGVQTTQALRRISSTWARCPIIAVTAHVLSSERQQWLAEGLDDVLIKPIDEAQLEQLLNRFVGVTSRLTAGSAVPPYSQRDSHIGKKPRLSHTTPSTLPVVDLEIGARLAGGKEYLAREQLKRLIDSLDESEQHMRAAFNQRNLPTLLDWVHELNGASRYCGAPELALMVETLETRLRTSGLDHVEGLLEDLYRAMTRLRAHRPLLLRH 927          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: UPI001F0E87AE (ATP-binding protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0E87AE)

HSP 1 Score: 795 bits (2052), Expect = 1.900e-280
Identity = 413/518 (79.73%), Postives = 447/518 (86.29%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPALIS-QQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQAINT-SLPLQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLR 1548
            IHQVLNNLI NALKFTHEGEVIVRVMLDN EGQHVVLNLSVSDTGIGLSDAHQ+ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+SELGKGT FSFTLPMLAN A ERP EI LANP IRLYE HAPTRHVLEHLLQRWEA PIAFD +E  QLLILGLEHSD+TPER +HWQ VID+ P PVL+L N NSFDLP LRLT GGETLYKPFSRAQLVA+L+QLL+PA +P K  G L AL +  Q LKLLIVDDNAPNRELL+ +LE P +HIT + SG QALEFA+++N DMVLMDIRMPGMDGVQTTQALRRL  TWARCPIIAVTAHVLSSERQKWL+EGLDDVLIKPIDE +L QLL+RFLGV+++  ++ S    +N       +++  +PATLPVIDLEIGARLAGGKE LAREQLKRLID  DESE HMR AF QQNL TLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGL HVEGLLEDLY+AMARLRA R +L R
Sbjct:  392 IHQVLNNLIGNALKFTHEGEVIVRVMLDNQEGQHVVLNLSVSDTGIGLSDAHQEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIEVESELGKGTTFSFTLPMLANRAIERPTEISLANPTIRLYETHAPTRHVLEHLLQRWEAQPIAFDDAESAQLLILGLEHSDYTPERHRHWQRVIDEMPYPVLILANGNSFDLPPLRLTQGGETLYKPFSRAQLVATLKQLLLPAFLPHKTSGSLVALPNPSQPLKLLIVDDNAPNRELLKNMLEDPSLHITALESGHQALEFARTSNVDMVLMDIRMPGMDGVQTTQALRRLSGTWARCPIIAVTAHVLSSERQKWLSEGLDDVLIKPIDEVKLHQLLHRFLGVTHRLADSGSTQPSHNRSQPVTEAFSPAAPATLPVIDLEIGARLAGGKEYLAREQLKRLIDSLDESEQHMRAAFAQQNLQTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLDHVEGLLEDLYQAMARLRAHRSLLQR 909          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A558J5U4_9GAMM (Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepID=A0A558J5U4_9GAMM)

HSP 1 Score: 794 bits (2051), Expect = 2.700e-280
Identity = 410/522 (78.54%), Postives = 450/522 (86.21%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPAL-ISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQAINTSLPL----QNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRN 1551
            IHQVLNNLI NALKFTHEG+VIVRVMLDN EGQHVVLNLSVSDTGIGLS+AHQ+ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+SELGKGT FSFTLPMLA+ A ERP EI LANP IRLYE HAPTRHVLEHLLQRWEA PIAFD+SE  QLLILGLEH DF PE   HWQTVIDQTPCP L+L N NSFDLP L LTHGGETLYKPFSRAQLVASL+QLL+ A  P   + E  AL  +   LKLLIVDDNAPNRELL+++LETP +H+TT+ SG QALEFA+++N DMVLMDIRMP MDGVQTTQ LRR+ STWARCPIIAVTAHVLSSERQ+WLAEGLDDVLIKPIDE QL+QLL RFLGV+++ +  S P     Q ++ T+    ++HT+PA LPV+DLEIGARLAGGKE LAREQLKRLID  DESE HMR AF+QQ+LPTLLDWVHGLNGASRYCGAPELALLVE LETRLRTSGL HVEGLL++LY+AMARLRA RP LLR+
Sbjct:  390 IHQVLNNLIGNALKFTHEGDVIVRVMLDNLEGQHVVLNLSVSDTGIGLSEAHQEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIGVESELGKGTTFSFTLPMLAHKAIERPAEISLANPAIRLYETHAPTRHVLEHLLQRWEAQPIAFDASEPAQLLILGLEHGDFNPEWHAHWQTVIDQTPCPTLILANGNSFDLPPLHLTHGGETLYKPFSRAQLVASLKQLLLSAFTPSNIEQEQLALPAATPPLKLLIVDDNAPNRELLKSMLETPALHVTTLESGHQALEFARTHNVDMVLMDIRMPRMDGVQTTQVLRRISSTWARCPIIAVTAHVLSSERQQWLAEGLDDVLIKPIDEEQLEQLLKRFLGVTHR-LTASNPAPTDSQRDSKTTTKPRFSHTAPAKLPVVDLEIGARLAGGKEDLAREQLKRLIDSLDESEQHMRTAFSQQHLPTLLDWVHGLNGASRYCGAPELALLVEALETRLRTSGLDHVEGLLDELYQAMARLRAHRPQLLRH 910          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A0C3DSY1_9GAMM (Histidine kinase n=11 Tax=Halomonas TaxID=2745 RepID=A0A0C3DSY1_9GAMM)

HSP 1 Score: 792 bits (2045), Expect = 2.190e-279
Identity = 409/521 (78.50%), Postives = 447/521 (85.80%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPAL-ISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQ---AINTSLPLQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLRN 1551
            IHQVLNNLI NALKFT  GEVIVRVMLDN EGQHVVLNLSVSDTGIGLSDAHQ+ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI V+S LGKGT F FTLPMLA+ A+ERP EI LANP IRLYE HAPTRHVLEHLL+RWEA PIAFD SE  +LLILGLEHSDF+PE   HWQ VIDQTPCP L+L N NSFDLP L LTHGGETLYKPFSRAQLV +L+QLL+   +P K + ELPAL  + Q LKLLIVDDNAPNRELL+ +LE P +H++TV SG QALEFA+++N DMVLMDIRMPGMDGVQTTQALRRL STWARCPIIAVTAHVLS+ERQ+WLAEGLDDVL+KPIDE QL QLLNRFLGV+++   +I      Q++   +     +H +PATLP+IDLEIGARLAGGKE LAREQLKRLID  DESE HMR AF QQ+LPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGL HVEGLLEDLYRAMARLRA RP L+R+
Sbjct:  390 IHQVLNNLIGNALKFTQHGEVIVRVMLDNLEGQHVVLNLSVSDTGIGLSDAHQEALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIGVESSLGKGTTFFFTLPMLAHKAAERPPEISLANPTIRLYETHAPTRHVLEHLLERWEAQPIAFDVSEPAKLLILGLEHSDFSPEWHAHWQAVIDQTPCPTLILANGNSFDLPPLHLTHGGETLYKPFSRAQLVTTLKQLLLSTHVPNKSEQELPALPAASQPLKLLIVDDNAPNRELLKNLLEDPTLHVSTVESGHQALEFARASNVDMVLMDIRMPGMDGVQTTQALRRLSSTWARCPIIAVTAHVLSNERQQWLAEGLDDVLVKPIDETQLAQLLNRFLGVTHRLTASIAEPPYPQHDINATQRTRVSHAAPATLPIIDLEIGARLAGGKEHLAREQLKRLIDSLDESEQHMRAAFGQQHLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLDHVEGLLEDLYRAMARLRALRPQLVRH 910          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A0D5M4R9_9GAMM (Histidine kinase n=5 Tax=Halomonas TaxID=2745 RepID=A0A0D5M4R9_9GAMM)

HSP 1 Score: 788 bits (2034), Expect = 1.020e-277
Identity = 409/518 (78.96%), Postives = 447/518 (86.29%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPAL-ISQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQ-AINTSLPLQNNTLTSNNVSYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPMLLR 1548
            IHQVLNNLI NALKFTHEG+VIVRVMLDN EGQHVVLNLSVSDTGIGLSDAHQ+ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEI ++S LG+GT FSFTLP+LA+ A ERP EI LANP I LYE HAPTRHVLEHLLQRWEA PIAFD+SE  QLLILGLEHSD+TPER ++WQ VIDQTPCPVL+L N NS DLP LRL  GGETLYKPFSRAQLVASL+QLL+P  +       L AL  S Q +KLLIVDDNAPNRELL+ +LE P +HIT + SG QALEFA+++N DMVLMDIRMPGMDGVQTTQALRRL STWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQL QLL+RFLGV+++ A + + P   ++  +   S++HT+PA L V+DLEIGARLAGGKE LAREQLKRLID  DESE HMR+AF QQNLP LLDWVHGLNGASRYCGAPELALLVETLETRLRTSGL HVE LLEDLY+AMARLRA RP LLR
Sbjct:  392 IHQVLNNLIGNALKFTHEGDVIVRVMLDNQEGQHVVLNLSVSDTGIGLSDAHQKALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEIELESVLGQGTTFSFTLPLLAHKAIERPAEISLANPTICLYETHAPTRHVLEHLLQRWEAQPIAFDASEPAQLLILGLEHSDYTPERHRYWQKVIDQTPCPVLILANGNSLDLPPLRLPQGGETLYKPFSRAQLVASLKQLLLPVLVSYDKPEPLAALPASTQPVKLLIVDDNAPNRELLKNMLEDPALHITALESGHQALEFARTSNVDMVLMDIRMPGMDGVQTTQALRRLSSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLHQLLHRFLGVTHRLADSNATPPSTSSSKTAIKSFSHTTPAKLLVVDLEIGARLAGGKEYLAREQLKRLIDSLDESEQHMRSAFAQQNLPMLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLDHVEELLEDLYQAMARLRAHRPFLLR 909          
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Match: A0A117KIK2_9GAMM (Histidine kinase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A117KIK2_9GAMM)

HSP 1 Score: 779 bits (2011), Expect = 3.000e-274
Identity = 403/522 (77.20%), Postives = 443/522 (84.87%), Query Frame = 1
Query:    1 IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGKGTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWEATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNNSFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPALISQ-QALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNADMVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLDQLLNRFLGVSNQAINTSLPLQNNTLTSNNV-------SYAHTSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQNLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDLYRAMARLRAQRPML 1542
            I Q+LNNL+ NALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQ LFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGG+I V+SELGKG  FSFTLPMLA+ A ER  E+ L  P IRLYE HAPTRHVLEHLLQRWEA PIAFDS+EKEQLLI+GLEHSDFTPERQ +WQTVIDQ PCP LVL N+NSFDLP L LT+GGETLYKPFSRAQLVASL+QLL+P     K    LPA +++ Q LKLLIVDDNA NRELL+ +LE P IHIT + SG QALEFA++N+ DMVLMDIRMPG+DGVQTTQALRRL  TWARCPIIAVTAHVLSSER+KWLAEGLDDVL KPIDE QL QLLNRFLG +++  + ++P    +   +         SY+  +PATLPV+DLE+GARLAGGKE LAREQLKRLID   ESE HMR A+ QQ+LPTLLDWVHGLNGASRYCGAPELALLVETLETRLRT GLSHVE LLEDLYRAMARLR+QR +L
Sbjct:  387 IQQILNNLVGNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSDAHQQALFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGKIGVESELGKGATFSFTLPMLAHKAVERAPELSLDAPLIRLYERHAPTRHVLEHLLQRWEAIPIAFDSTEKEQLLIVGLEHSDFTPERQAYWQTVIDQAPCPALVLANSNSFDLPPLHLTYGGETLYKPFSRAQLVASLKQLLLPTLKVNKPAAPLPAPMTEAQTLKLLIVDDNASNRELLKTMLENPTIHITALESGHQALEFARANSVDMVLMDIRMPGLDGVQTTQALRRLGGTWARCPIIAVTAHVLSSEREKWLAEGLDDVLTKPIDETQLHQLLNRFLGATHRLADFTVPFAAPSAAHSTAKATLIKPSYSSVAPATLPVVDLELGARLAGGKEYLAREQLKRLIDSLAESEQHMREAYAQQDLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTGGLSHVEELLEDLYRAMARLRSQRSLL 908          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11370.907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9VQM6_9ZZZZ2.910e-31185.36Histidine kinase n=1 Tax=marine sediment metagenom... [more]
A0A1A9R9E6_9GAMM1.270e-28880.58Histidine kinase n=2 Tax=unclassified Halomonas Ta... [more]
A0A2G2KMI0_HALSX9.300e-28480.04Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepI... [more]
A0A246RW75_9GAMM2.670e-28279.46Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepI... [more]
A0A265DXB5_9GAMM1.670e-28078.69Histidine kinase n=2 Tax=Halomonas TaxID=2745 RepI... [more]
UPI001F0E87AE1.900e-28079.73ATP-binding protein n=1 Tax=Halomonas neptunia Tax... [more]
A0A558J5U4_9GAMM2.700e-28078.54Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepI... [more]
A0A0C3DSY1_9GAMM2.190e-27978.50Histidine kinase n=11 Tax=Halomonas TaxID=2745 Rep... [more]
A0A0D5M4R9_9GAMM1.020e-27778.96Histidine kinase n=5 Tax=Halomonas TaxID=2745 RepI... [more]
A0A117KIK2_9GAMM3.000e-27477.20Histidine kinase n=1 Tax=Halomonas sp. 54_146 TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11370contigE-siliculosus-1a_F_contig11370:410..1969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1560
Model size1560
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.T
EC2.7.13.3
EggNOG OGs1NXDJ@1224,1T1YN@1236,1XRTN@135619,COG0642@1,COG0642@2
EggNOG free text desc.Histidine kinase
KEGG ModuleM00475
KEGG Pathwayko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111
KEGG koko:K07678
Seed eggNOG ortholog1415755.JQLV01000001_gene2164
Seed ortholog evalue8.3e-229
Seed ortholog score799.7
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927648.083394-CDS-E-siliculosus-1a_F_contig11370:409..19691622927648.083394-CDS-E-siliculosus-1a_F_contig11370:409..1969Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11370 410..1969 -
1696318623.9767518-CDS-E-siliculosus-1a_F_contig11370:409..19691696318623.9767518-CDS-E-siliculosus-1a_F_contig11370:409..1969Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11370 410..1969 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11370.907.1prot_E-siliculosus-1a_F_contig11370.907.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig11370 410..1969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig11370.907.1

>prot_E-siliculosus-1a_F_contig11370.907.1 ID=prot_E-siliculosus-1a_F_contig11370.907.1|Name=mRNA_E-siliculosus-1a_F_contig11370.907.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=520bp
IHQVLNNLISNALKFTHEGEVIVRVMLDNHEGQHVVLNLSVSDTGIGLSD
AHQQELFSAFSQAEPSHSRQFGGSGLGLTICRQLIERMGGEISVQSELGK
GTMFSFTLPMLANNASERPVEIVLANPNIRLYEAHAPTRHVLEHLLQRWE
ATPIAFDSSEKEQLLILGLEHSDFTPERQQHWQTVIDQTPCPVLVLTNNN
SFDLPTLRLTHGGETLYKPFSRAQLVASLRQLLIPACIPLKHDGELPALI
SQQALKLLIVDDNAPNRELLRAILETPLIHITTVGSGLQALEFAKSNNAD
MVLMDIRMPGMDGVQTTQALRRLDSTWARCPIIAVTAHVLSSERQKWLAE
GLDDVLIKPIDEAQLDQLLNRFLGVSNQAINTSLPLQNNTLTSNNVSYAH
TSPATLPVIDLEIGARLAGGKESLAREQLKRLIDGFDESEPHMRNAFTQQ
NLPTLLDWVHGLNGASRYCGAPELALLVETLETRLRTSGLSHVEGLLEDL
YRAMARLRAQRPMLLRNQD*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig11370:410..1969-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig11370.907.1 ID=mRNA_E-siliculosus-1a_F_contig11370.907.1|Name=mRNA_E-siliculosus-1a_F_contig11370.907.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1560bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11370:410..1969- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTCATCAGGTATTGAATAACTTAATTAGTAATGCGCTCAAATTCACCCA TGAAGGCGAGGTCATTGTGCGCGTTATGTTGGATAACCATGAGGGCCAGC ACGTGGTCCTCAACTTAAGTGTCAGTGACACGGGTATCGGTCTAAGTGAT GCCCATCAGCAGGAGTTATTCAGCGCTTTCTCCCAAGCAGAACCGAGTCA TTCCCGCCAATTCGGTGGCAGCGGCTTAGGTCTTACTATTTGTCGGCAAC TTATTGAACGCATGGGGGGCGAAATCAGTGTCCAAAGTGAGCTTGGCAAA GGCACCATGTTCTCCTTTACCCTGCCCATGCTTGCCAATAATGCCAGCGA ACGGCCAGTGGAAATTGTCCTAGCCAATCCTAATATTCGATTATATGAGG CACATGCGCCCACCCGTCATGTACTGGAGCATTTACTACAACGCTGGGAA GCTACACCTATTGCCTTTGACTCATCTGAGAAAGAGCAATTGCTGATATT AGGATTAGAGCACAGCGACTTCACCCCGGAACGACAACAACATTGGCAAA CAGTCATTGACCAAACGCCCTGCCCCGTATTGGTTTTAACGAATAACAAT AGTTTTGATCTCCCGACGCTGCGTTTAACCCATGGCGGAGAAACCCTTTA TAAGCCCTTTTCACGCGCGCAATTAGTGGCATCTTTAAGGCAGTTGCTCA TACCGGCATGTATACCACTTAAGCACGATGGAGAATTGCCAGCCCTTATT TCTCAACAAGCATTAAAGCTACTAATTGTCGACGACAATGCACCTAACCG CGAGCTTCTTAGAGCAATCCTTGAAACACCACTCATCCACATCACTACGG TGGGAAGCGGCCTGCAAGCGCTAGAATTTGCGAAGTCAAATAATGCCGAT ATGGTGCTAATGGATATTCGTATGCCAGGCATGGACGGCGTGCAAACAAC TCAGGCGCTAAGGCGACTGGACAGCACCTGGGCGCGCTGTCCGATTATCG CCGTTACCGCCCATGTGCTTAGCAGTGAGCGCCAAAAATGGTTGGCGGAA GGGTTAGATGATGTGCTAATTAAGCCGATTGACGAAGCTCAGTTGGACCA GTTACTGAACCGCTTTTTAGGGGTAAGTAACCAAGCTATCAACACAAGCC TCCCGCTACAAAACAATACATTAACCAGTAATAACGTCAGCTATGCCCAT ACGTCACCTGCCACCCTACCTGTCATAGATCTTGAAATTGGAGCACGCTT GGCGGGCGGTAAAGAGTCTTTGGCACGCGAGCAGCTAAAGCGGCTGATTG ATGGTTTTGATGAGAGCGAGCCGCACATGCGCAACGCTTTTACGCAGCAA AATTTACCCACACTGCTGGATTGGGTGCATGGACTCAATGGTGCAAGCCG TTACTGCGGCGCACCGGAACTGGCGCTGTTGGTAGAAACGCTAGAAACGC GCTTGCGGACCAGCGGGCTTAGCCATGTAGAGGGTCTACTTGAAGACCTT TACCGCGCCATGGCACGTTTACGAGCGCAGCGGCCAATGCTGCTTAGAAA CCAAGATTAA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11370:410..1969-

>mRNA_E-siliculosus-1a_F_contig11370.907.1 ID=mRNA_E-siliculosus-1a_F_contig11370.907.1|Name=mRNA_E-siliculosus-1a_F_contig11370.907.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3120bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11370:410..1969- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTCATCAGGTATTGAATAACTTAATTAGTAATGCGCTCAAATTCACCCA
TGAAGGCGAGGTCATTGTGCGCGTTATGTTGGATAACCATGAGGGCCAGC
ACGTGGTCCTCAACTTAAGTGTCAGTGACACGGGTATCGGTCTAAGTGAT
GCCCATCAGCAGGAGTTATTCAGCGCTTTCTCCCAAGCAGAACCGAGTCA
TTCCCGCCAATTCGGTGGCAGCGGCTTAGGTCTTACTATTTGTCGGCAAC
TTATTGAACGCATGGGGGGCGAAATCAGTGTCCAAAGTGAGCTTGGCAAA
GGCACCATGTTCTCCTTTACCCTGCCCATGCTTGCCAATAATGCCAGCGA
ACGGCCAGTGGAAATTGTCCTAGCCAATCCTAATATTCGATTATATGAGG
CACATGCGCCCACCCGTCATGTACTGGAGCATTTACTACAACGCTGGGAA
GCTACACCTATTGCCTTTGACTCATCTGAGAAAGAGCAATTGCTGATATT
AGGATTAGAGCACAGCGACTTCACCCCGGAACGACAACAACATTGGCAAA
CAGTCATTGACCAAACGCCCTGCCCCGTATTGGTTTTAACGAATAACAAT
AGTTTTGATCTCCCGACGCTGCGTTTAACCCATGGCGGAGAAACCCTTTA
TAAGCCCTTTTCACGCGCGCAATTAGTGGCATCTTTAAGGCAGTTGCTCA
TACCGGCATGTATACCACTTAAGCACGATGGAGAATTGCCAGCCCTTATT
TCTCAACAAGCATTAAAGCTACTAATTGTCGACGACAATGCACCTAACCG
CGAGCTTCTTAGAGCAATCCTTGAAACACCACTCATCCACATCACTACGG
TGGGAAGCGGCCTGCAAGCGCTAGAATTTGCGAAGTCAAATAATGCCGAT
ATGGTGCTAATGGATATTCGTATGCCAGGCATGGACGGCGTGCAAACAAC
TCAGGCGCTAAGGCGACTGGACAGCACCTGGGCGCGCTGTCCGATTATCG
CCGTTACCGCCCATGTGCTTAGCAGTGAGCGCCAAAAATGGTTGGCGGAA
GGGTTAGATGATGTGCTAATTAAGCCGATTGACGAAGCTCAGTTGGACCA
GTTACTGAACCGCTTTTTAGGGGTAAGTAACCAAGCTATCAACACAAGCC
TCCCGCTACAAAACAATACATTAACCAGTAATAACGTCAGCTATGCCCAT
ACGTCACCTGCCACCCTACCTGTCATAGATCTTGAAATTGGAGCACGCTT
GGCGGGCGGTAAAGAGTCTTTGGCACGCGAGCAGCTAAAGCGGCTGATTG
ATGGTTTTGATGAGAGCGAGCCGCACATGCGCAACGCTTTTACGCAGCAA
AATTTACCCACACTGCTGGATTGGGTGCATGGACTCAATGGTGCAAGCCG
TTACTGCGGCGCACCGGAACTGGCGCTGTTGGTAGAAACGCTAGAAACGC
GCTTGCGGACCAGCGGGCTTAGCCATGTAGAGGGTCTACTTGAAGACCTT
TACCGCGCCATGGCACGTTTACGAGCGCAGCGGCCAATGCTGCTTAGAAA
CCAAGATTAAATTCATCAGGTATTGAATAACTTAATTAGTAATGCGCTCA
AATTCACCCATGAAGGCGAGGTCATTGTGCGCGTTATGTTGGATAACCAT
GAGGGCCAGCACGTGGTCCTCAACTTAAGTGTCAGTGACACGGGTATCGG
TCTAAGTGATGCCCATCAGCAGGAGTTATTCAGCGCTTTCTCCCAAGCAG
AACCGAGTCATTCCCGCCAATTCGGTGGCAGCGGCTTAGGTCTTACTATT
TGTCGGCAACTTATTGAACGCATGGGGGGCGAAATCAGTGTCCAAAGTGA
GCTTGGCAAAGGCACCATGTTCTCCTTTACCCTGCCCATGCTTGCCAATA
ATGCCAGCGAACGGCCAGTGGAAATTGTCCTAGCCAATCCTAATATTCGA
TTATATGAGGCACATGCGCCCACCCGTCATGTACTGGAGCATTTACTACA
ACGCTGGGAAGCTACACCTATTGCCTTTGACTCATCTGAGAAAGAGCAAT
TGCTGATATTAGGATTAGAGCACAGCGACTTCACCCCGGAACGACAACAA
CATTGGCAAACAGTCATTGACCAAACGCCCTGCCCCGTATTGGTTTTAAC
GAATAACAATAGTTTTGATCTCCCGACGCTGCGTTTAACCCATGGCGGAG
AAACCCTTTATAAGCCCTTTTCACGCGCGCAATTAGTGGCATCTTTAAGG
CAGTTGCTCATACCGGCATGTATACCACTTAAGCACGATGGAGAATTGCC
AGCCCTTATTTCTCAACAAGCATTAAAGCTACTAATTGTCGACGACAATG
CACCTAACCGCGAGCTTCTTAGAGCAATCCTTGAAACACCACTCATCCAC
ATCACTACGGTGGGAAGCGGCCTGCAAGCGCTAGAATTTGCGAAGTCAAA
TAATGCCGATATGGTGCTAATGGATATTCGTATGCCAGGCATGGACGGCG
TGCAAACAACTCAGGCGCTAAGGCGACTGGACAGCACCTGGGCGCGCTGT
CCGATTATCGCCGTTACCGCCCATGTGCTTAGCAGTGAGCGCCAAAAATG
GTTGGCGGAAGGGTTAGATGATGTGCTAATTAAGCCGATTGACGAAGCTC
AGTTGGACCAGTTACTGAACCGCTTTTTAGGGGTAAGTAACCAAGCTATC
AACACAAGCCTCCCGCTACAAAACAATACATTAACCAGTAATAACGTCAG
CTATGCCCATACGTCACCTGCCACCCTACCTGTCATAGATCTTGAAATTG
GAGCACGCTTGGCGGGCGGTAAAGAGTCTTTGGCACGCGAGCAGCTAAAG
CGGCTGATTGATGGTTTTGATGAGAGCGAGCCGCACATGCGCAACGCTTT
TACGCAGCAAAATTTACCCACACTGCTGGATTGGGTGCATGGACTCAATG
GTGCAAGCCGTTACTGCGGCGCACCGGAACTGGCGCTGTTGGTAGAAACG
CTAGAAACGCGCTTGCGGACCAGCGGGCTTAGCCATGTAGAGGGTCTACT
TGAAGACCTTTACCGCGCCATGGCACGTTTACGAGCGCAGCGGCCAATGC
TGCTTAGAAACCAAGATTAA
back to top