mRNA_E-siliculosus-1a_F_contig1130.864.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1130.864.1
Unique NamemRNA_E-siliculosus-1a_F_contig1130.864.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: D7FNT3_ECTSI (Molecular chaperones HSP70/HSC70, HSP70 superfamily n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNT3_ECTSI)

HSP 1 Score: 1204 bits (3114), Expect = 0.000e+0
Identity = 631/634 (99.53%), Postives = 632/634 (99.68%), Query Frame = 1
Query:  106 MENMSVNEPAKGELETVIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAGTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVNTD 2007
            MENMSVNEPAKGELETVIGIDLGTTFSCVAVWDEAAGRP+VLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDT DSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELF RCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAGTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVNTD
Sbjct:    1 MENMSVNEPAKGELETVIGIDLGTTFSCVAVWDEAAGRPIVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTMDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFTRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAGTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVNTD 634          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A836CLV9_9STRA (Molecular chaperones HSP70/HSC70, HSP70 superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV9_9STRA)

HSP 1 Score: 808 bits (2087), Expect = 1.480e-283
Identity = 433/643 (67.34%), Postives = 520/643 (80.87%), Query Frame = 1
Query:   88 EKVEAAMENMSVNEPAKGELETVIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGR---ANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAG--TTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVN 2001
            ++  A +E +SVN  +K + E VIGIDLGTT+SCVA WD AAGRP+VL  +TG KT+PSYV++T QARVVGQPAKSQA SNPANTVYDVKRIIGRSWND VV+ + K+FPF+V+DGGN RP +EV W G   +  PEEVSA +L ELKR AE+ALG+   AAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLH      DSG A SNVVIFDLGGGTFDVSVLSM+GGVFEVKATGGDTHLGGEDFDN +VDWAVA+FE     G    A +L+++ RA+RRL+TACE AKR++S+AP+  L+V+SL+DD DLS+ ++RE+FE LN  LF RC++TV  VL DA ++  +V+DVVLVGGSTRVPALQD+L+ALFGGR+ELCRSINPDEAVA+GAAVQG IL +G +  GG DL     TD++LLDVTPLSLGIELEGREMS LIKRNT IPCRKSR Y+TVED+QTSIDVVVYEGERRSVD  +KLG+F ITGVERA+KGEPKVEVTF LDANGIL VTA+D VTGA+AGA+I A+DGRLS +E+ +M+ +AE+ RAQD+E + K+ + ++LE AVY  LS AR + D   V+ L+ +RDWLD  S  A+L ++  KA  L+    + V+
Sbjct:    6 DQATAGVEGLSVNG-SKQQREVVIGIDLGTTYSCVACWDAAAGRPVVLPAATGEKTVPSYVAYTPQARVVGQPAKSQAPSNPANTVYDVKRIIGRSWNDDVVQAERKNFPFKVIDGGNERPTIEVEWRGETHKFMPEEVSATILTELKRQAERALGRTVKAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHNSSQG-DSG-ARSNVVIFDLGGGTFDVSVLSMDGGVFEVKATGGDTHLGGEDFDNALVDWAVAQFEAGAAGGSKESAKRLRASTRAMRRLQTACETAKRALSTAPSVQLDVDSLIDDTDLSVTVTRERFEELNAPLFTRCMDTVRNVLADAKVSFDEVSDVVLVGGSTRVPALQDQLRALFGGRMELCRSINPDEAVAIGAAVQGQILCSGGSG-GGVDLGAGFVTDIVLLDVTPLSLGIELEGREMSTLIKRNTAIPCRKSRVYSTVEDYQTSIDVVVYEGERRSVDGNHKLGDFQITGVERAKKGEPKVEVTFTLDANGILNVTARDQVTGAEAGAQIAARDGRLSEEEVQRMIDEAERFRAQDEEFSLKLRLTSSLEEAVYRGLSVARERKDIMAVSELDELRDWLDEQSQAASLAKLQEKAAMLKTKFNIDVH 644          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A7S1FWH8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWH8_9STRA)

HSP 1 Score: 720 bits (1859), Expect = 1.630e-249
Identity = 388/621 (62.48%), Postives = 484/621 (77.94%), Query Frame = 1
Query:  154 VIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLH--GKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAG---TTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVN 2001
            +IGIDLGTT+SCV+ WDE   R  V+   +G +TMPS+V+FT   ++VG PAKSQ+ASNP NTVYDVKRIIGRS++D VV+ +    PF +V+GG  +PKVEV+W   KK+++PEE+S+MVL ELKR AE  LG+   +AVITVPAHFN+QQRQATKDAGRIAGLDVRRIINEPTAAALAYGLH  G     +     SNVVIFDLGGGTFDVS+LSM+GGVFEV+ATGGDTHLGGEDFD+ + +W + +    HG   A  +K +ARA  RLR A ENAK+++SS+ T ++EV+S+  D D + +LSR +FESLN ELF RCI+TV +V++DA +T+ DVTDVVLVGGSTRVP LQ RL ALFGGRIELC++I+PDEAVA+GAAVQG ILA+G +  GG DLA    TTDLLLLDVTPLSLGIELEGR MS LIKRNT IPCRK+R+YTTVEDWQT IDVVVYEGER  VD  N+LG F I+G+++AR GEPKV+V+FALDANGIL V+A+D VTGA+A AEIKA+ GRL+  EI+KM+ DAE++R +D EL  K+  +TALE A+++A S+   KG T Q   L ++ DWL+ DS  A+L EM ++   + +  G+ V+
Sbjct:    5 IIGIDLGTTYSCVSCWDEKNQRVEVIPTPSGDRTMPSWVAFTPSGKLVGMPAKSQSASNPRNTVYDVKRIIGRSFHDPVVQKEINVLPFTIVNGGQDKPKVEVAWREGKKELSPEEISSMVLTELKRAAEVHLGEEVKSAVITVPAHFNNQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHDSGSVKPDNKEDKKSNVVIFDLGGGTFDVSILSMDGGVFEVRATGGDTHLGGEDFDSTIAEWCIEKIASQHGEKIAATIKKSARANARLRRAVENAKKALSSSNTVSIEVDSISGDIDFAADLSRTEFESLNSELFGRCIDTVLSVVEDAEITVDDVTDVVLVGGSTRVPYLQQRLHALFGGRIELCKTIHPDEAVAIGAAVQGRILASGGSG-GGKDLAASETTTDLLLLDVTPLSLGIELEGRAMSTLIKRNTAIPCRKTRTYTTVEDWQTEIDVVVYEGERPCVDANNRLGSFVISGIQKARSGEPKVDVSFALDANGILNVSARDQVTGAEARAEIKAESGRLTESEIEKMIADAERYREEDAELTAKVAYRTALEEALFTAQSSV-AKG-TGQETELCDLMDWLELDSEAASLEEMKSRGRIIEDKFGIIVS 622          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: B8C1V0_THAPS (Heat shock protein, HSP70, hsc70 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V0_THAPS)

HSP 1 Score: 711 bits (1834), Expect = 1.010e-245
Identity = 383/623 (61.48%), Postives = 479/623 (76.89%), Query Frame = 1
Query:  148 ETVIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGG-NGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAG--SNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAG---TTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAV 1998
            E +IGIDLGTTFSCVA WD+   +  V+ + +G +T PS+VSFT + ++VG  AKSQ ASNP NTVYD+KRIIGRS+ D V  ++ K+FPF V +GG +G PK+ V W G KK++ PEE+SAMVL ELK  AE+ LG+    AVITVPAHFN+QQRQATKDAGRIAGLDV+RIINEPTAAAL+YGLH KK+  +SG     +NVVIFDLGGGTFDVSVL+M+ GVFEVKATGGDTHLGGEDFDN+++ W + +  K   A    KL+ N RA  RLR A ENAKR++SS+ +T +EV+SL+ D D ++ L R KFE LN  LF RCI+TV  VL DA  +  +VTD+VLVGGSTR+P+LQ  L  +FGGRIELC+S++PDEAVA GAAVQGHILA G +  GG DLAG   TTDLLLLDVTPLSLGIELEG++MS LIKRNT IPC+K+R+YTTV+DWQT IDVVV+EGER  VD  NKLG F I+GV+RAR GEPKV+VTFALDANGIL V+A+D VTGA+A AEIKA+ GRL++D+IDKM++DAEK+RAQD+EL +K   + +LE A+++  S       +++V  L ++ DWL+ DS  ATL +M  +   + +  G+ V
Sbjct:    4 EPIIGIDLGTTFSCVACWDDKTNKVEVIESPSG-RTCPSWVSFTKEGKLVGTAAKSQVASNPRNTVYDIKRIIGRSFTDPVTAEECKNFPFEVSEGGAHGEPKIVVEWRGEKKELRPEEISAMVLAELKLAAERHLGREVKGAVITVPAHFNNQQRQATKDAGRIAGLDVKRIINEPTAAALSYGLHAKKEREESGAEQKKANVVIFDLGGGTFDVSVLAMDSGVFEVKATGGDTHLGGEDFDNSVMKWCLEQI-KAKNADVWAKLQDNPRAQSRLRRAVENAKRTLSSSMSTEIEVDSLVGDFDFTVTLDRAKFEELNAVLFKRCIDTVNEVLNDAGCSQDEVTDLVLVGGSTRIPSLQTSLYDMFGGRIELCKSVHPDEAVAHGAAVQGHILATGGSG-GGQDLAGAEMTTDLLLLDVTPLSLGIELEGKQMSTLIKRNTAIPCKKTRTYTTVDDWQTEIDVVVFEGERPHVDANNKLGSFVISGVQRARAGEPKVDVTFALDANGILNVSARDQVTGAEARAEIKAEKGRLTSDDIDKMIEDAEKYRAQDEELTEKTDYKASLEEALFTVQSKVAETNKSNEVKELADLMDWLELDSDTATLEDMKKRGRIVEDTWGIIV 623          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A7S3MBA8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBA8_9STRA)

HSP 1 Score: 692 bits (1787), Expect = 1.810e-238
Identity = 373/623 (59.87%), Postives = 472/623 (75.76%), Query Frame = 1
Query:  154 VIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGS------NVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAG-TTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVN 2001
            +IGIDLGTT+SCVAV+D      +VL NS G KT PS+V+FT+  RVVGQPAK QA+ N +NT+YDVKR IGRS  D V R++++ FP+ ++DGG+GRP +EV W G K++++PEE+S+MVL+E+KR AE AL K    AVITVPAHFNDQQRQATKDAGRIAGLDV RIINEPTAAALAYGLH       +GI G+      NVVIFDLGGGTFDVSVLSMEGGVF VKATGGDTHLGGEDFDN +VDWA+ + E+ HG   A  +KS+ R+ +RLR A E AKR++S++    +E+++L+D  + ++ ++R  FE LN   F +CI+TV  VL+DA   +  V+DVVLVGGSTR+PALQ++L ALF GR+ELC+SINPDEAVA GAAVQG IL AG +  GGA L G ++DL+LLDVTPLSLGIELEG+ MS LI RNT IPC KSR YTT EDWQT IDVVVYEGER      NKLGEF I+GV+RA++GEPKVEVTF+LDANGIL+VTA D VTGA+A A+IKA  GRL+  +I++M+ DAE++R +D  LA K+ M+ ALE A+YS  S+   + D   ++ L++   W++ +S +AT  +++ K D L    GV V+
Sbjct:   11 IIGIDLGTTYSCVAVYDNETQSVIVLPNSVGDKTTPSWVAFTESGRVVGQPAKQQASMNASNTIYDVKRFIGRSLEDPVTREESRRFPYLILDGGDGRPVIEVEWRGIKQRLSPEEISSMVLLEMKRAAEAALNKTIKKAVITVPAHFNDQQRQATKDAGRIAGLDVVRIINEPTAAALAYGLH------TNGIDGAAKQDRPNVVIFDLGGGTFDVSVLSMEGGVFAVKATGGDTHLGGEDFDNTLVDWALKQIEEKHGKNAAKAVKSSHRSQQRLRRAVEAAKRTLSNSNEAEIELDALIDGENFNVTITRAIFEKLNAANFTKCIDTVKAVLRDAGTAVDSVSDVVLVGGSTRIPALQEQLSALFSGRVELCKSINPDEAVAYGAAVQGAILRAGGSG-GGAALEGLSSDLVLLDVTPLSLGIELEGKVMSTLIPRNTAIPCVKSREYTTCEDWQTEIDVVVYEGERPQTSANNKLGEFKISGVQRAKRGEPKVEVTFSLDANGILSVTAVDKVTGAQAKADIKADRGRLTDSDIERMIADAERYREEDLALARKIHMRNALEEAIYSVKSSLTERNDIAGISELDDFISWVEAESDSATYEQLSRKGDQLYAKFGVKVD 626          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A6V2K935_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2K935_9STRA)

HSP 1 Score: 671 bits (1730), Expect = 7.260e-230
Identity = 372/633 (58.77%), Postives = 467/633 (73.78%), Query Frame = 1
Query:  148 ETVIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAG---------------SNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADL-AGTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAV 1998
            + VIGIDLGTT+SC+A WDE A +  V+  ++G +T+PS+V+FT   ++VG  AK+Q ASNP NTVYD+KRIIGR ++D VV+D+AK+FPF +V+G +G PK++V W G  K++ PEE+SAMVL ELK  AEK LG   + AVITVPAHFN+QQRQATKDAGRIAGL+V RIINEPTAAAL+YGLHG+K+  +                    SNVVIFDLGGGTFDVS+LSM+ GVFEVKATGGDTHLGGEDFDN +    ++  E+ +G     K++ + RA  RLR A E  KR++S + +   EV+SLL D +  + L+R +FE LN +LF RCI+TV  VL DA++T   VTDVVLVGGSTRVP LQ  L  LF  R+EL ++I+PDEAVA+GAAVQG IL+ G    GG DL A TTDLLLLDVTPLSLGIELEGR+MS LIKRNT IPCRK+R+YTTV DWQT IDVVV+EGER  VD  NKLG F I+GVERAR GEPKV+VTFALDANGIL V+A+D VTG+ A A IKA+ GRL+ ++ID+M+ DAEK+R  D+ L +K   +TALE A+Y+A S  + +G  + V  ++ + DWL+ DS NATL EM  K   + +  G+ V
Sbjct:    5 DPVIGIDLGTTYSCLACWDEKAQQVEVIATASG-RTLPSWVAFTPTGKLVGASAKAQVASNPGNTVYDIKRIIGRPFSDPVVQDEAKAFPFGIVEGSHGEPKIKVDWRGETKELNPEEISAMVLGELKLAAEKHLGVKVSKAVITVPAHFNNQQRQATKDAGRIAGLNVMRIINEPTAAALSYGLHGQKEAEEKXXXXXXXXXXEDATKEKVPSNVVIFDLGGGTFDVSILSMDSGVFEVKATGGDTHLGGEDFDNTIFAHCLSYMEEKYGKDVRQKVEKSQRASSRLRRAVEQGKRNLSGSTSVEFEVDSLLPDLNFVMTLTRAEFEKLNGKLFQRCIDTVKDVLVDANVTKDQVTDVVLVGGSTRVPYLQTALYELFEKRVELSKTIHPDEAVAIGAAVQGRILSTGGTG-GGKDLTATTTDLLLLDVTPLSLGIELEGRQMSTLIKRNTPIPCRKTRTYTTVSDWQTEIDVVVFEGERPCVDANNKLGSFVISGVERARAGEPKVDVTFALDANGILNVSAKDQVTGSSANATIKAEKGRLTPEDIDRMIADAEKYRVADEALEEKTAYKTALEEALYTAQS--KYEGGDEMVEVMD-LLDWLELDSENATLDEMKNKGRTVEDRFGIMV 632          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A7S2FFP8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FFP8_9STRA)

HSP 1 Score: 651 bits (1680), Expect = 5.240e-223
Identity = 357/592 (60.30%), Postives = 449/592 (75.84%), Query Frame = 1
Query:  244 GAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKS---NARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLA--GTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKG-DTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVN 2001
            G +T PS+V+FT + RVVGQPAK QAA N  NTVYDVKRIIGR W+D V++ + K+FPF +V+  NGRP VEV W G+ +++APE +SAMVL E+KR AE ALG   T AV+TVPAHFNDQQRQATKDAGRIAGL+V RIINEPTAAALAYGL  K  T       +NV++FDLGGGTFDVSVL+M+GGV EV+ATGGDTHLGGEDFDN ++DW      +      A K K    N R  RRLR+ACE+AKR +S   +T +EVESLL+D D+S+EL+R  FE+++  L  RC+  V  VL+DA L + D++DVVLVGGSTR+ ALQ +LK LF  +++LC+SINPDEAVA GAAVQG ILA G    GG DLA  G +DLLL+DVTPLSLGIELEG++MS LIKRNT IPCRK+R+YTTV+D+QT IDVVVYEGE+  VD  NKLGEF I+GV RA+ GEP+V+VTFALDANGIL V+A+D  T A A AEIKA  GRL+ +EID+M+ +AE+ RAQDDE++ K++++ A+E  VY AL+  R KG DT++   L+N+RDW+D D+ +A LTE+  +   L    G+ ++
Sbjct:    3 GFRTTPSFVAFTSKGRVVGQPAKDQAAMNVRNTVYDVKRIIGRGWDDDVLQKEKKAFPFNLVEA-NGRPLVEVDWRGSTRRLAPEAISAMVLTEMKRSAEAALGHPVTKAVVTVPAHFNDQQRQATKDAGRIAGLEVLRIINEPTAAALAYGLQEKSSTLADDTVKTNVMVFDLGGGTFDVSVLTMDGGVLEVRATGGDTHLGGEDFDNALMDWVTHNMAEASENPPATKKKLKALNGRQARRLRSACEDAKRQLSVTASTVIEVESLLEDQDVSMELTRADFEAVSAPLMARCMKAVNGVLQDAKLGVTDISDVVLVGGSTRILALQGQLKELF--KLDLCKSINPDEAVAYGAAVQGRILATGGTG-GGTDLALGGCSDLLLVDVTPLSLGIELEGKQMSTLIKRNTPIPCRKTRTYTTVQDYQTEIDVVVYEGEKPCVDANNKLGEFQISGVLRAKAGEPQVQVTFALDANGILKVSAEDKQTHAIAHAEIKAGSGRLTEEEIDEMIMEAERFRAQDDEMSKKLSLRNAIEDGVYRALAQTRDKGEDTEE---LDNLRDWVDLDAEDAPLTEIEDRVALLTERYGIELS 587          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: F0YH10_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH10_AURAN)

HSP 1 Score: 627 bits (1616), Expect = 2.430e-212
Identity = 349/593 (58.85%), Postives = 441/593 (74.37%), Query Frame = 1
Query:  154 VIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNG-RPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKA-CTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLA--GTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLD 1920
            V+GIDLGTTFSCVAV+D+ A    VL N+ GA+T PSYVSFTD+ RVVG  AK+Q+A+N   T++DVKRI+GR++ D VV+D++K  PF +++   G RP VEV+W G KK+ APEEVSAMVL E+  +A+K LG+     AVITVPAHFNDQQRQATKDAGRIAGL+V RIINEPTAAALAYGLH    + ++    S V+IFDLGGGTFDVSVLSME GVF V+ATGGDTHLGGEDFD  +V+  V ++ +         L+ +++A+RRL  ACE AKR +SSA    ++  S+L D DL ++++R+ FE L   LF  C+ TV +V++DA   +  +T++VLVGGSTRVP LQ+ L  LF  ++ELC+S++PDEAVAVGAAVQG IL AG    GG DLA  G  DL+LLDVTPLSLGIELEG  MS LIKR+T IPC K+R YTT +D+QT+IDV VYEGER +V   NKLGEF I G+ERARKGEPKVEVTFALDANGILAV+A+D VTGA A  +IKA  GRL  ++I +M++DA+K+R  D   ADK  ++ ALE A ++A +A +   D  + A LEN+ +WLD
Sbjct:   15 VLGIDLGTTFSCVAVFDDEAKEVKVLANAEGARTTPSYVSFTDEGRVVGAAAKAQSAANAKGTLFDVKRILGRTYEDHVVQDESKRLPFPILEHPKGKRPLVEVTWRGEKKRFAPEEVSAMVLGEMVAIAKKRLGRDDLNRAVITVPAHFNDQQRQATKDAGRIAGLEVMRIINEPTAAALAYGLHDLA-SDENNPKQSRVLIFDLGGGTFDVSVLSMEDGVFAVQATGGDTHLGGEDFDAALVEHVVMQYARKRAG---TNLRKSSKAMRRLAAACEVAKRELSSADDAVVDAPSILPDVDLCVKVTRQAFEGLCGHLFESCLRTVESVVRDAQCELSQITEIVLVGGSTRVPRLQEALYQLFDEKLELCKSVHPDEAVAVGAAVQGAILRAGMTH-GGEDLAPEGCKDLVLLDVTPLSLGIELEGGVMSTLIKRSTPIPCAKTREYTTCDDYQTAIDVAVYEGERPAVSANNKLGEFKIDGIERARKGEPKVEVTFALDANGILAVSARDKVTGASASTQIKADRGRLEEEDIQRMIEDAKKYREDDAAFADKAGLRNALEEAAFAAKAACK---DDAKKATLENMLEWLD 599          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A8J2WY61_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY61_9STRA)

HSP 1 Score: 620 bits (1599), Expect = 6.930e-210
Identity = 361/653 (55.28%), Postives = 448/653 (68.61%), Query Frame = 1
Query:  136 KGELETVIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVD--GGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAV-AEFEKIHGA-------GRAN--------------------KLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAGTT--DLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAV 1998
            +G+   V+GIDLGTTFSCVAV+D+A  +  VL NS GA+T PSYV+FT+  R+VG  AKSQAASN   T++DVKRIIGR++ D VV+D+ K  PF V +    + RP VEV W G  KQ APEEVSAMVL E+  +A K LG+  T AVITVPAHFNDQQRQATKDAGRIAGL+V RIINEPTAAALAYGLH   D          V+IFDLGGGTFDVSVL +EGGVF V+ATGGDTHLGGEDFD  +VD  + A   K  G        G  N                    KLK++ +A+RRL   CENAKR +S+A    +E E L    DL + ++R+ FE L  +LF  C+NTV +V++DA   + D+T+ VLVGGSTRVP LQ++L A FGGR+ELC++++PDEAVAVGAAVQG IL AG    GG DLA  +  DL+LLDVTPLSLGIELEG  MS LIKR+T IPC K+R YTTVED+QT IDV VYEGER  V   NKLGEF++ G+ R + GE KV+VTFALDANGIL+V+A+DTVT A A   IKA  GRL  D+I +M++DA+K R  D + A+K  ++ ALE A Y+A   A  K      A L+++ +WL+YD+ +A +  +  +   LR + GV V
Sbjct:    5 EGDAGPVLGIDLGTTFSCVAVYDDAEKKVKVLENSEGARTTPSYVAFTETGRLVGAAAKSQAASNAKGTLFDVKRIIGRTFQDHVVQDECKRLPFPVREHPSKSKRPLVEVRWRGETKQFAPEEVSAMVLQEMADIAAKKLGREITRAVITVPAHFNDQQRQATKDAGRIAGLEVLRIINEPTAAALAYGLH---DLATKSSEVGRVLIFDLGGGTFDVSVLQLEGGVFAVQATGGDTHLGGEDFDARLVDHVIRAHARKACGPKIKNVKNGHKNQKGSSAAXXXXXXXXQQIIGKLKADPKAMRRLARLCENAKRELSTAEDAEVEAEELQPGLDLKVRVTRQAFEGLCADLFESCLNTVESVVRDAGCQMSDITECVLVGGSTRVPKLQEKLYAQFGGRLELCKTVHPDEAVAVGAAVQGAILRAG-LTGGGQDLAPESCQDLVLLDVTPLSLGIELEGGHMSTLIKRSTAIPCSKTREYTTVEDFQTQIDVCVYEGERPHVSGNNKLGEFSVEGLYRGKAGEAKVDVTFALDANGILSVSARDTVTNASAETTIKADRGRLDEDDIRRMIEDAKKMREGDSQFAEKARLRNALEEACYAANKTASGKSK----AQLDDLLEWLEYDAEDADMDALVERVATLRADFGVVV 649          
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Match: A0A024GHU2_9STRA (Uncharacterized protein n=4 Tax=Albugo TaxID=65356 RepID=A0A024GHU2_9STRA)

HSP 1 Score: 625 bits (1612), Expect = 7.260e-210
Identity = 346/619 (55.90%), Postives = 447/619 (72.21%), Query Frame = 1
Query:  127 EPAKGELETVIGIDLGTTFSCVAVWDEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYDVKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEEVSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLDVRRIINEPTAAALAYGLHGKKDTTDSGIAGS--NVVIFDLGGGTFDVSVLSMEGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNARAIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDELFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRIELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAGTTDLLLLDVTPLSLGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSVDTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAGAEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSALSAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLR 1977
            E A+     VIGIDLGTT+SCV VW +  G+  ++ N+ G +T PS+V+FTD  R++G+ AK QAASNP NTV+D KRIIGRS+ D+ V+ DA+ FPF++V G   +P ++V +    KQ  PEE+SAMVL  +K  AE  LG+    AV+TVPA+FND QRQ+TKDAG IAGLDV+RIINEPTAAALAYGL      T++G  G   NV+IFDLGGGTFDVS+L +E G+FEVKATGGDTHLGGEDFDNNMVD+ + EF++ +   R +   SN R++RRLRTACE+AKR +S++ T ++EV+SL +  D S+ ++R KFESLN+ELF RC  TV  VL DA++   +++++VLVGGSTR+P +Q+ L A+FGG+ EL +SINPDEAVA GAAVQG IL        G     T  LLL+DVTPLSLGIE  G+ MSVLIKRNT IP RK+R YTT ED+QT++DV +YEGER  VD+ NKLGEFTI+G+ERAR+GEP+V+VTF +DANGIL V+A D  TGAKA   I    GRLS ++ID+MV DAEK +  D E+  ++  +  LE  +Y A++  + KGD     AL + R+WLD D  +ATL E+  K   L 
Sbjct:  183 ERAERGFSEVIGIDLGTTYSCVGVWKD--GQVEIIANTEGNRTTPSWVAFTDSERLIGEAAKIQAASNPTNTVFDAKRIIGRSFADEAVQRDAQHFPFKIVSGDGDKPLIQVEFKKETKQFTPEEISAMVLTRMKETAEAYLGQPIKQAVVTVPAYFNDHQRQSTKDAGSIAGLDVKRIINEPTAAALAYGLD-----TNAGSDGKACNVLIFDLGGGTFDVSILRIENGIFEVKATGGDTHLGGEDFDNNMVDYMIQEFKRKN---RGSDPSSNPRSMRRLRTACESAKRMLSTSTTASIEVDSLFEGIDFSLTVTRAKFESLNEELFKRCEETVLKVLADAAMKPDEISEIVLVGGSTRIPKVQNLLSAVFGGK-ELSKSINPDEAVAYGAAVQGAIL-------DGIRNDATNSLLLVDVTPLSLGIETVGKVMSVLIKRNTAIPVRKTRVYTTEEDYQTAVDVCIYEGERACVDSNNKLGEFTISGIERARRGEPQVKVTFEIDANGILNVSATDKKTGAKAETTISNNRGRLSQEDIDRMVSDAEKFKKDDAEMLSRIEARNGLEQFIYRAINIVQEKGDAATGNALRDAREWLD-DHEDATLRELEEKKRMLE 782          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1130.864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT3_ECTSI0.000e+099.53Molecular chaperones HSP70/HSC70, HSP70 superfamil... [more]
A0A836CLV9_9STRA1.480e-28367.34Molecular chaperones HSP70/HSC70, HSP70 superfamil... [more]
A0A7S1FWH8_9STRA1.630e-24962.48Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B8C1V0_THAPS1.010e-24561.48Heat shock protein, HSP70, hsc70 n=1 Tax=Thalassio... [more]
A0A7S3MBA8_9STRA1.810e-23859.87Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6V2K935_9STRA7.260e-23058.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2FFP8_9STRA5.240e-22360.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YH10_AURAN2.430e-21258.85Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2WY61_9STRA6.930e-21055.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A024GHU2_9STRA7.260e-21055.90Uncharacterized protein n=4 Tax=Albugo TaxID=65356... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1130contigE-siliculosus-1a_F_contig1130:18382..25920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1959
Model size2702
Exons10
Ec32 orthologEc-12_003470.1
Ec32 ortholog descriptionMolecular chaperones HSP70/HSC70, HSP70 superfamily
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Best eggNOG OGNA|NA|NA
Best tax levelBacillariophyta
COG Functional cat.O
EggNOG OGs2XB2X@2836,COG0443@1,KOG0101@2759
EggNOG free text desc.Heat shock protein
KEGG ModuleM00353,M00355
KEGG Pathwayko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG TC1.A.33.1
KEGG koko:K03283
Seed eggNOG ortholog35128.Thaps28189
Seed ortholog evalue1.2e-203
Seed ortholog score716.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1130.864.1prot_E-siliculosus-1a_F_contig1130.864.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1130 18433..25228 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927638.331772-UTR-E-siliculosus-1a_F_contig1130:18381..184321622927638.331772-UTR-E-siliculosus-1a_F_contig1130:18381..18432Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1130 18382..18432 +
1696318620.9628744-UTR-E-siliculosus-1a_F_contig1130:18381..184321696318620.9628744-UTR-E-siliculosus-1a_F_contig1130:18381..18432Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1130 18382..18432 +
1622927638.4592059-UTR-E-siliculosus-1a_F_contig1130:25228..259201622927638.4592059-UTR-E-siliculosus-1a_F_contig1130:25228..25920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1130 25229..25920 +
1696318621.0874085-UTR-E-siliculosus-1a_F_contig1130:25228..259201696318621.0874085-UTR-E-siliculosus-1a_F_contig1130:25228..25920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1130 25229..25920 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927638.3450048-CDS-E-siliculosus-1a_F_contig1130:18432..187681622927638.3450048-CDS-E-siliculosus-1a_F_contig1130:18432..18768Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 18433..18768 +
1696318620.9818661-CDS-E-siliculosus-1a_F_contig1130:18432..187681696318620.9818661-CDS-E-siliculosus-1a_F_contig1130:18432..18768Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 18433..18768 +
1622927638.355823-CDS-E-siliculosus-1a_F_contig1130:19315..195701622927638.355823-CDS-E-siliculosus-1a_F_contig1130:19315..19570Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 19316..19570 +
1696318620.9947429-CDS-E-siliculosus-1a_F_contig1130:19315..195701696318620.9947429-CDS-E-siliculosus-1a_F_contig1130:19315..19570Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 19316..19570 +
1622927638.368857-CDS-E-siliculosus-1a_F_contig1130:20810..209871622927638.368857-CDS-E-siliculosus-1a_F_contig1130:20810..20987Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 20811..20987 +
1696318621.005324-CDS-E-siliculosus-1a_F_contig1130:20810..209871696318621.005324-CDS-E-siliculosus-1a_F_contig1130:20810..20987Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 20811..20987 +
1622927638.3802967-CDS-E-siliculosus-1a_F_contig1130:21362..215691622927638.3802967-CDS-E-siliculosus-1a_F_contig1130:21362..21569Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 21363..21569 +
1696318621.017301-CDS-E-siliculosus-1a_F_contig1130:21362..215691696318621.017301-CDS-E-siliculosus-1a_F_contig1130:21362..21569Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 21363..21569 +
1622927638.3909178-CDS-E-siliculosus-1a_F_contig1130:21889..219751622927638.3909178-CDS-E-siliculosus-1a_F_contig1130:21889..21975Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 21890..21975 +
1696318621.0263898-CDS-E-siliculosus-1a_F_contig1130:21889..219751696318621.0263898-CDS-E-siliculosus-1a_F_contig1130:21889..21975Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 21890..21975 +
1622927638.401171-CDS-E-siliculosus-1a_F_contig1130:22334..225031622927638.401171-CDS-E-siliculosus-1a_F_contig1130:22334..22503Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 22335..22503 +
1696318621.034275-CDS-E-siliculosus-1a_F_contig1130:22334..225031696318621.034275-CDS-E-siliculosus-1a_F_contig1130:22334..22503Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 22335..22503 +
1622927638.4112236-CDS-E-siliculosus-1a_F_contig1130:23174..234261622927638.4112236-CDS-E-siliculosus-1a_F_contig1130:23174..23426Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 23175..23426 +
1696318621.0435557-CDS-E-siliculosus-1a_F_contig1130:23174..234261696318621.0435557-CDS-E-siliculosus-1a_F_contig1130:23174..23426Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 23175..23426 +
1622927638.4214127-CDS-E-siliculosus-1a_F_contig1130:23716..238031622927638.4214127-CDS-E-siliculosus-1a_F_contig1130:23716..23803Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 23717..23803 +
1696318621.055124-CDS-E-siliculosus-1a_F_contig1130:23716..238031696318621.055124-CDS-E-siliculosus-1a_F_contig1130:23716..23803Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 23717..23803 +
1622927638.433101-CDS-E-siliculosus-1a_F_contig1130:24573..247591622927638.433101-CDS-E-siliculosus-1a_F_contig1130:24573..24759Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 24574..24759 +
1696318621.0707774-CDS-E-siliculosus-1a_F_contig1130:24573..247591696318621.0707774-CDS-E-siliculosus-1a_F_contig1130:24573..24759Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 24574..24759 +
1622927638.4440823-CDS-E-siliculosus-1a_F_contig1130:25024..252281622927638.4440823-CDS-E-siliculosus-1a_F_contig1130:25024..25228Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 25025..25228 +
1696318621.079284-CDS-E-siliculosus-1a_F_contig1130:25024..252281696318621.079284-CDS-E-siliculosus-1a_F_contig1130:25024..25228Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1130 25025..25228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1130.864.1

>prot_E-siliculosus-1a_F_contig1130.864.1 ID=prot_E-siliculosus-1a_F_contig1130.864.1|Name=mRNA_E-siliculosus-1a_F_contig1130.864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=653bp
MAALASNGNGSAEKVEAAMENMSVNEPAKGELETVIGIDLGTTFSCVAVW
DEAAGRPMVLTNSTGAKTMPSYVSFTDQARVVGQPAKSQAASNPANTVYD
VKRIIGRSWNDQVVRDDAKSFPFRVVDGGNGRPKVEVSWLGAKKQMAPEE
VSAMVLVELKRVAEKALGKACTAAVITVPAHFNDQQRQATKDAGRIAGLD
VRRIINEPTAAALAYGLHGKKDTTDSGIAGSNVVIFDLGGGTFDVSVLSM
EGGVFEVKATGGDTHLGGEDFDNNMVDWAVAEFEKIHGAGRANKLKSNAR
AIRRLRTACENAKRSVSSAPTTTLEVESLLDDADLSIELSREKFESLNDE
LFIRCINTVTTVLKDASLTIGDVTDVVLVGGSTRVPALQDRLKALFGGRI
ELCRSINPDEAVAVGAAVQGHILAAGDARTGGADLAGTTDLLLLDVTPLS
LGIELEGREMSVLIKRNTTIPCRKSRSYTTVEDWQTSIDVVVYEGERRSV
DTCNKLGEFTITGVERARKGEPKVEVTFALDANGILAVTAQDTVTGAKAG
AEIKAKDGRLSADEIDKMVQDAEKHRAQDDELADKMTMQTALEGAVYSAL
SAARTKGDTDQVAALENVRDWLDYDSTNATLTEMTAKADFLRNNLGVAVN
TD*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1130:18382..25920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1130.864.1 ID=mRNA_E-siliculosus-1a_F_contig1130.864.1|Name=mRNA_E-siliculosus-1a_F_contig1130.864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7539bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1130:18382..25920+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GACTGGTCAGCAATCACCTACTCTCCTCTTCCCTAGATCGCTTGAGTTAC CATGGCCGCTCTCGCCAGCAACGGTAACGGGTCCGCGGAGAAGGTCGAGG CGGCAATGGAGAACATGTCGGTCAACGAGCCTGCAAAGGGTGAGCTCGAG ACCGTGATCGGTATCGACCTCGGGACGACCTTCAGCTGCGTGGCTGTGTG GGACGAGGCTGCGGGAAGGCCAATGGTGCTGACCAACTCCACTGGCGCCA AGACGATGCCCAGCTACGTGTCCTTCACCGACCAGGCGCGTGTGGTGGGG CAGCCTGCCAAGAGCCAGGCAGCCTCCAACCCCGCCAACACCGTGTACGA TGTCAAGCGGATCATCGGGCGGTCGTGGAATGACCAGGTACGCGTGCGGG CGGAGTTTGAATATTCTCTGCCGGGAGCAGTAGCTGGTTCTGAGCAGCAG CACCGCACAAACTCAGCCCAAGAGGCATTTGGACGTGTGGATTATTGTCA GGCATCCCTGGCGTTGGACTGAACGAGCAGCAAGGACGGGCAACATAGAT GGTGTAGTGGCGATTAAGCTTTAGGAAAACAACAGATACAATAGTCCAGA AAATATTTTTTCAATACGAAACACACACGTGGTGTTCCTATGCTTTGTCT GGCTGCCCCACCACCACACACGTTTGTCGATGGAAGCAGCATGCTGTGCA AGTATTGCTGCTGCCCTCTGCAACGTGGTGCTCTCAGCAGTTGCAGTCAC ATTCTACTGCGCTCGCCTTGCCTCTTCCCGGCGGCTTGTCGGTGGCAGTC GGTGCCAATCGGTCCTTGGTGGATCTGCTGGACGTACGTACGCTGCAGCC GCAGCAGCTTGTTTTCTTTTCCCCTTGTTTTCTTGCCGAACACCTCCAAA TCGTAACTTTTCTTGACGTTACACACCAAAACAGGTAGTGCGGGACGACG CCAAGTCCTTCCCCTTCCGAGTCGTGGACGGCGGGAACGGCCGCCCCAAG GTGGAGGTGTCATGGCTCGGAGCCAAGAAACAGATGGCGCCCGAGGAGGT GTCGGCCATGGTGCTCGTGGAGCTCAAGCGCGTCGCCGAGAAGGCCCTCG GCAAGGCCTGCACCGCCGCCGTCATCACCGTCCCGGCCCACTTCAACGAC CAGCAGCGCCAGGCGACCAAGGACGCCGGCCGCATCGCGGTGCGTGGAGA GAAAGAGAGAGAGAGAGAGGGAGGGAGAGAGGCATCGTGTGTCTTTGTTG TTTCTTGTCGCACGCTGCACGCGTGTTCAATTGGTTGTGTCAGAGGTCTT TTTTTTTTGGTACGCCCCGACACCCTCTCGACTACTGCTGGTGGTATGTA TATACTGCTGTAGGAACCATAAATACAAATGTACAAACTCAGAAAGACTA CCAATTCGAGGTAAAACCACAGTCGAACGGGATGTGTTGGAGTGCATATG TATTATCTCGAACCAGTACAGTAGACCACTGGGGGTGGTATTGTCGCTGT ATGCCTGGAGTATCTTCTGGAAAAGATACCGCTGTACACGCGGGAATACG CTTGTGTCTCACCCCGAGCTGTACAGAATGTACCTGATAGTGCTGGACCT GATGTGACATCGTCGGCCACAATGTACTGCCTGTAGATTCCATGAACATG CTAACTGGTTGCGTACAGGCCCCACAATTCAGTATACACGCACTTTCTCT GAGCTGCACAAGAGCTGTGTCATATCGCGAAAGCGCTATCGCGAGGCGAT CTTAGCAGTTACACCCGCTGACATGGTCGGTAACGCTTGAACCATAGGCT GCTCGTCAGCTGACTGCGCAACTCTTCCGTGTCCATTCTGTCTGGCCTAC CCTGATGTGTACATCGCTCAGTACAACCTCTCTCACGCATCTTCCTGTGT AGCTCACGCAACTTCCTATGTAGACACATGAAAGAGTGCGGGAGGTTGTA TTGAGCGATATACACATCACGGCAGGCAAGTACGGAGTGAACATGAAAGA GTTGCGTAGTCAGCTGACTGAAGTTCTAAGCCTTTGTCGATCGAAATATG CTTATGTCTTAAGCCTGTTGGCCTCCCAGCTATTTTGAACGCAGTGCCTG ACGCCTCGGCCACGCTGCTGGTATTTGTGTAAAGGGTGCCACTAAAGTGT TGCACAACAGCTGGGAATCTAACCCGCGTCCATATCTAAAGGCTAGCACA ACGCTCCGCCCTCGGCAAAGTCGCACCGTGAAGAAACGCCCCTGACGATG TTTCAAGCAAATTTCCTCTAGGACGTGTACAGCAGCATATGTTCCTTTTC GCTCGAGGTGTTCTGACCCCTCTCGCCACCCCTCTACCAAACACTATTAT ACTCTCCCCGAGAAGCCGCTGACACGTTAGTTATCCCGTTCCGTGACTCT GATGCGGCGACTTGTCGCCTCCCCCGCAGGGCCTAGACGTGCGCCGTATC ATCAACGAGCCCACCGCCGCCGCCTTGGCGTACGGCCTCCACGGCAAGAA GGACACGACGGACTCCGGGATCGCGGGCTCCAACGTGGTCATCTTCGACC TGGGGGGCGGGACCTTCGATGTCAGCGTGCTCTCCATGGAGGGAGGCGTG TTTGAGGTGCGTGGTGCTGTGGAAGAAGAGTCAATGGGTGTTGTTTAGAA CCCCCGTCAGAAAGATGGCCGATTGTTTGACGGCTAACATTACATTGGTG CCGCACTTGGAGACAATTGAACCATTATGCTCAATGCTACATATCAACGC ACGCACGAGCTTGGAGAACGATTTGTAAGCCGGCTAACAACACCTACACA TTTACGACCTATTATGGCGGCCACTTGTAGCCTAACGCTAGGAACGAAGA AGCCACACTGTTGAGGTTATTTTGGGGATGCGGGTGCTAGCCGTAGCCCA CCGCTGCCCTTTCTTTTGCCCTTCGTATGCACACTCGATCAAAATAATCA TTGCTGCTGCTGCTGCTGCTGTGTCGAGCAGGTTAAGGCCACGGGCGGCG ACACCCACCTTGGTGGCGAGGACTTCGACAACAACATGGTGGACTGGGCG GTGGCGGAGTTCGAGAAGATCCACGGCGCCGGCAGGGCCAACAAGCTCAA GAGCAACGCCCGCGCCATCCGGCGCCTGCGGACAGCGTGCGAGAACGCCA AGCGCTCGGTTTCCTCCGCGCCCACCACCACCCTCGAGGTGAGAGCCCGG GCTCTTGCTCTGTTGCCAAGTGTACCGGGCTACATTGTAGTCTTCCATCT GCGAGTGGCGTTTTCCTGCCCCTCCACGGTGGTACTTCATCAGGGATGTG CTCGGGTTTCGATAGCCGGTAGTGGCGATTATGTACACTCGGGGACAGCA CCAAGAGTTTAGCACTTGGCCTCTTGCATGCATGTGTTTGTGGTTGATTT TGATTTGTCGTCAGCTGCAAATACGTTCGCTCTAACCTACCATGTTGTAC CATTTTTGCTCATGTTGTGTTTTACCACACATCCCTTGCCCTTTGCCGCC TGGACAAGGTGGAGAGTCTCCTTGACGACGCGGACCTGTCGATCGAGCTT TCGCGGGAAAAGTTCGAGTCTCTCAACGACGAGCTGTTCATCAGGTGAAG CCAGAACAACAAAACAAAGAGAAGAGAAAAACCTGGGGTTTCGGGACTTC CAACAGCCTCTGCTTACTACTCGTACCAAGCGTCTTAAGAAGCGATCACG AGGCCTCTTCGATTCTTGCGTAAGGATGTTGTACTTGACCGACCGCGGAA GACGGATGTTCTTGTGCGAGGTAGCGCGGCAGGTGCGAGCGTCTTTCAAA GACACTCAGACACGCTACGCGCCCCGTGTTGTGGCACCATCTTCTTGGGG TCGTCCCTCCATCTGACGCCTTGCGACTCGAAATGTTGGTCCTCGTCGCC GCGTGCTCATGTGTGCGTTTGGTGCTCTTGGCTGGCCTACTTGCTACCCA CAGGTGCATCAACACGGTCACGACCGTGCTGAAGGACGCGTCGCTGACGA TCGGCGACGTGACGGACGTCGTTTTGGTTGGCGGGAGCACCCGAGTGCCC GCCCTCCAGGACAGGCTCAAGGCGCTCTTCGGCGGCAGGATCGAGCTGTG CCGAAGCATCAACCCTGATGAGGTGCGGTGCGGTGCGGGGCGATCGATGC ATTTGCGTTGCGTCTCGATGTTGTGTTGTGCAGTGCTGCATGTGTATGTG TGCGTGCATTCCGTTGTGGGGAAGGTTTTTGTTGGCGTGTTTGCTGGCGG TGGCGAAAGGGACCGGCTGCGACGGCCCCGTTTTATAGCCAGATGTCGAC CAACAACATGTAGCAGCGCTTGATTAGAGTTGGTTGGTTTGGTGAGTGTT CGTTGCCGGATCCTTTCTCCTTACACCGTACATTGCCAGGCACGAGTGCC GCTACAGTTTGTTTTTTTTCCTGAAAGAGGTTATTGTCGATTCCGAGGGA GTTGTTTGCAGACCATGGAACTGCCGGTGGGTGCTTGTTACCGTTGGGAC TTGTGAAGTGTGTGGGTAAGTTTTTTACAAAGCGTTTCAGTCTGACCGCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCGCCCCCCCCCCCCCCCGCCCCGCCCGCCCCCCGCNNNNNNNNNN GGGGGCGGGGGGGGGGTTTTTTTCGTGGGGGGTTGGTGGGGGGGGGGGGG GGTTTTTTTTAAAACGTTTTTGTCTGCCCCCCCCCCCCCCCCCCCCCCCC TTCCTTGACATTTTCGTGTTTTTCACCCGGCCGGCGAAAACAGGCGGTAG CGGTGGGCGCGGCAGTGCAGGGCCACATCCTCGCCGCCGGCGACGCGCGG ACGGGGGGCGCCGACCTCGCGGGCACGACCGACCTCCTCCTTCTGGACGT GACGCCCCTCTCCCTGGGCATCGAGCTCGAGGGCCGCGAGATGTCGGTGC TGATCAAGCGCAACACGACCATCCCTTGCCGCAAGTCGCGGTCGTACACC ACGGTGGAGGACTGGCAGACGTCCATCGACGTCGTCGTGTACGAGGTGCG GTCGTCGGTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGTGGG GGACGTCATCACGTTTGTCTTTTGGTTTTTTTCCGCGATGATAGCGGTGT TTGGTTCAACAGTTTTCGACGGGCCGGGTGAAGAACTCCGAGGTCAACGG GAGAGGGGGGCGATGGGGTCATTGTCTGGGGGTGATTTAATTCTACTTCC GCAAGAAAAGGTCTTTCTAAGACGTTCGGCGCCCTGTAACAACAGCTAAT GTCCCGGTCTCTGGCTGCGTGGTTTCCCAATGCAGGGCGAGCGCCGTTCT GTGGACACGTGCAACAAGCTCGGGGAGTTCACCATTACCGGTGTGGAACG GGCGCGCAAGGGGGAACCCAAGGTCGGTGGACGTGTACATTGTATCGAGG CTGTATTGTTTGCTTCTTGTTCTCGGAACGGACTTCCTTGTTCTCTATCG GGCCCAGCTGACCCGACCCGCCCTCGAGGTGTCAGGCAGCCACCGACATG GGCACTCCTAGTCGTTCGGCTTTTGTTTATGGCTCGGGCGGCGTGACTTT TTCTCCGTTCCGTCTCCACGCGGTTCCATACCAAGGACCTACCGGGCGTA CGTCTCGTTACCGACGAAGGGTCGGACAAAATCGATCAAAGGCTCGCCGC CTACAGACCGGAATGTTTTGACATGGACGGCGCCCGCCCCCCGGCCGCCG GCCGGCCGATATGTTTGCCGGTGGCATCACCGCCCTCGGAAGCGTAGCTC TCTTCAGGAGAAAAACAAAGCTGATGAAAGTGGGAGTGTACCGTACCGAT GTTTCCACGCCCCCTTCACGTGGAAATGACCAATGGCCTCAACTAGAGCC CTCTGTTGATAACAGTCCGGGGGTGGGGATACTCGCAATGGTAGTTGCCC GGACGTCCGGCCACCAGCTTGGTGATGGCACACTCGTGTTCTCCGCCAGG CTGCCATTCCACATCAAGAGTAGGCAAAACATAAGAGTCTTCACCGGTAC CGTCGTCTTGCATGTAGGTTTGTTTTTCCTTTGTGCTCATTGTTCCCCTC CGCCCCCCCGTCTTGGCTCAACCGTTTTTCCGCGCTTCCACACGCCTTCG ATGATGGCGACCGACGACACCGACAACAAAACGCCTGACCAGGTGGAGGT AACCTTCGCCTTGGACGCCAACGGCATCCTGGCCGTAACGGCGCAGGACA CGGTAACGGGGGCGAAGGCGGGCGCGGAGATCAAGGCCAAGGACGGGCGA CTGTCTGCCGACGAGATCGACAAGATGGTCCAGGACGCGGAGAAGCACAG GGCGCAGGACGACGAGCTTGCCGACAAGGTGCGTGCCCTCGGCCTCGCCC CGCGTACACCCCTTTTTGTAACCGTGCTTTTTTTTTTGTATCTTCTATGT ATTTCTTCCACGTGTGGTGAGAATAACACGGGATGTGAATTTCCCTCGCG CCATGGTCGTGGTATTTGAACACCAGTTTGGAGTTGACAAACGGCCACGT GTTGGCACAAGACTAGCGTTCCTCCGTGCTTTTTCTTAACTGTTTTTCCG ACACCTACCCCATTCCCTGCCCCACGCGCTTCGTCTTTCTCAGATGACCA TGCAGACGGCCTTGGAAGGGGCGGTCTACTCGGCTCTCAGCGCCGCGCGC ACTAAGGGCGACACCGACCAGGTGGCCGCTCTGGAGAACGTGCGCGACTG GCTAGACTACGACTCGACCAACGCCACCCTCACCGAGATGACGGCGAAAG CTGACTTCCTGAGGAACAACTTGGGCGTGGCGGTGAACACGGACTAGTAG GGTTTGTGATTCGACGTGATCGTCTCGCGGTTCGTCGGCTTGTCCCTTTC CGTCTTTTTTTAGGATAGATGATGGCTGATTCCTCCTTTTCGAGAAGAAC AGTGGTGGGTTGGGTGAGTAGCGGGATAGAAGGAAGAAGCATGGAGGGGT CTTGCGGGCGGCGTTTAAATCAAGCTGTTTGTGCTGATGGGAGAGGAGAT ACTCAAAGATTACGCGTCACAAATATGTTTTTTTTATTTTAACCATGGAA GTACACTGTACTAGATGTGTGCGAGGGATATGTGTCTGGTCATCAGACCA GCGATTTTGTAAACTCCCACGCGTAATTTGAAGTCAGGACCGTTGTCGGT GTCTCTTGCCTTTTTATCCGTTCTGAAAGATGAAAAAATGTTGACGAATT CACACGCACAAACTCCATTTTTCAACGATGTGTCGTGGATGGATCGTGAG ATGAGGGCCGATGACGATGGCCATGTTTCCACTAAATCTTTCGCCGATAG AGCAACATTCGGCACATCCGGCGGTGTGCACTAGCCAACCGTTGGCCTCC TTGACGGAGACAAGCGTGCATGTATCTGTGCGCTCTTTTTCTTGAGAATT GCATCCGGTGGGTTTGCTACCCCGGAGCTGAAATATCGAACGTCGCAGCA GTGACTGGAAACAGTCCGTAATCTTCGGCGGAACCCAAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1130:18382..25920+

>mRNA_E-siliculosus-1a_F_contig1130.864.1 ID=mRNA_E-siliculosus-1a_F_contig1130.864.1|Name=mRNA_E-siliculosus-1a_F_contig1130.864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3918bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1130:18382..25920+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCGCTCTCGCCAGCAACGGTAACGGGTCCGCGGAGAAGGTCGAGGC
GGCAATGGAGAACATGTCGGTCAACGAGCCTGCAAAGGGTGAGCTCGAGA
CCGTGATCGGTATCGACCTCGGGACGACCTTCAGCTGCGTGGCTGTGTGG
GACGAGGCTGCGGGAAGGCCAATGGTGCTGACCAACTCCACTGGCGCCAA
GACGATGCCCAGCTACGTGTCCTTCACCGACCAGGCGCGTGTGGTGGGGC
AGCCTGCCAAGAGCCAGGCAGCCTCCAACCCCGCCAACACCGTGTACGAT
GTCAAGCGGATCATCGGGCGGTCGTGGAATGACCAGATGGCCGCTCTCGC
CAGCAACGGTAACGGGTCCGCGGAGAAGGTCGAGGCGGCAATGGAGAACA
TGTCGGTCAACGAGCCTGCAAAGGGTGAGCTCGAGACCGTGATCGGTATC
GACCTCGGGACGACCTTCAGCTGCGTGGCTGTGTGGGACGAGGCTGCGGG
AAGGCCAATGGTGCTGACCAACTCCACTGGCGCCAAGACGATGCCCAGCT
ACGTGTCCTTCACCGACCAGGCGCGTGTGGTGGGGCAGCCTGCCAAGAGC
CAGGCAGCCTCCAACCCCGCCAACACCGTGTACGATGTCAAGCGGATCAT
CGGGCGGTCGTGGAATGACCAGGTAGTGCGGGACGACGCCAAGTCCTTCC
CCTTCCGAGTCGTGGACGGCGGGAACGGCCGCCCCAAGGTGGAGGTGTCA
TGGCTCGGAGCCAAGAAACAGATGGCGCCCGAGGAGGTGTCGGCCATGGT
GCTCGTGGAGCTCAAGCGCGTCGCCGAGAAGGCCCTCGGCAAGGCCTGCA
CCGCCGCCGTCATCACCGTCCCGGCCCACTTCAACGACCAGCAGCGCCAG
GCGACCAAGGACGCCGGCCGCATCGCGGTAGTGCGGGACGACGCCAAGTC
CTTCCCCTTCCGAGTCGTGGACGGCGGGAACGGCCGCCCCAAGGTGGAGG
TGTCATGGCTCGGAGCCAAGAAACAGATGGCGCCCGAGGAGGTGTCGGCC
ATGGTGCTCGTGGAGCTCAAGCGCGTCGCCGAGAAGGCCCTCGGCAAGGC
CTGCACCGCCGCCGTCATCACCGTCCCGGCCCACTTCAACGACCAGCAGC
GCCAGGCGACCAAGGACGCCGGCCGCATCGCGGGCCTAGACGTGCGCCGT
ATCATCAACGAGCCCACCGCCGCCGCCTTGGCGTACGGCCTCCACGGCAA
GAAGGACACGACGGACTCCGGGATCGCGGGCTCCAACGTGGTCATCTTCG
ACCTGGGGGGCGGGACCTTCGATGTCAGCGTGCTCTCCATGGAGGGAGGC
GTGTTTGAGGGCCTAGACGTGCGCCGTATCATCAACGAGCCCACCGCCGC
CGCCTTGGCGTACGGCCTCCACGGCAAGAAGGACACGACGGACTCCGGGA
TCGCGGGCTCCAACGTGGTCATCTTCGACCTGGGGGGCGGGACCTTCGAT
GTCAGCGTGCTCTCCATGGAGGGAGGCGTGTTTGAGGTTAAGGCCACGGG
CGGCGACACCCACCTTGGTGGCGAGGACTTCGACAACAACATGGTGGACT
GGGCGGTGGCGGAGTTCGAGAAGATCCACGGCGCCGGCAGGGCCAACAAG
CTCAAGAGCAACGCCCGCGCCATCCGGCGCCTGCGGACAGCGTGCGAGAA
CGCCAAGCGCTCGGTTTCCTCCGCGCCCACCACCACCCTCGAGGTTAAGG
CCACGGGCGGCGACACCCACCTTGGTGGCGAGGACTTCGACAACAACATG
GTGGACTGGGCGGTGGCGGAGTTCGAGAAGATCCACGGCGCCGGCAGGGC
CAACAAGCTCAAGAGCAACGCCCGCGCCATCCGGCGCCTGCGGACAGCGT
GCGAGAACGCCAAGCGCTCGGTTTCCTCCGCGCCCACCACCACCCTCGAG
GTGGAGAGTCTCCTTGACGACGCGGACCTGTCGATCGAGCTTTCGCGGGA
AAAGTTCGAGTCTCTCAACGACGAGCTGTTCATCAGGTGGAGAGTCTCCT
TGACGACGCGGACCTGTCGATCGAGCTTTCGCGGGAAAAGTTCGAGTCTC
TCAACGACGAGCTGTTCATCAGGTGCATCAACACGGTCACGACCGTGCTG
AAGGACGCGTCGCTGACGATCGGCGACGTGACGGACGTCGTTTTGGTTGG
CGGGAGCACCCGAGTGCCCGCCCTCCAGGACAGGCTCAAGGCGCTCTTCG
GCGGCAGGATCGAGCTGTGCCGAAGCATCAACCCTGATGAGGTGCATCAA
CACGGTCACGACCGTGCTGAAGGACGCGTCGCTGACGATCGGCGACGTGA
CGGACGTCGTTTTGGTTGGCGGGAGCACCCGAGTGCCCGCCCTCCAGGAC
AGGCTCAAGGCGCTCTTCGGCGGCAGGATCGAGCTGTGCCGAAGCATCAA
CCCTGATGAGGCGGTAGCGGTGGGCGCGGCAGTGCAGGGCCACATCCTCG
CCGCCGGCGACGCGCGGACGGGGGGCGCCGACCTCGCGGGCACGACCGAC
CTCCTCCTTCTGGACGTGACGCCCCTCTCCCTGGGCATCGAGCTCGAGGG
CCGCGAGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCTTGCCGCA
AGTCGCGGTCGTACACCACGGTGGAGGACTGGCAGACGTCCATCGACGTC
GTCGTGTACGAGGCGGTAGCGGTGGGCGCGGCAGTGCAGGGCCACATCCT
CGCCGCCGGCGACGCGCGGACGGGGGGCGCCGACCTCGCGGGCACGACCG
ACCTCCTCCTTCTGGACGTGACGCCCCTCTCCCTGGGCATCGAGCTCGAG
GGCCGCGAGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCTTGCCG
CAAGTCGCGGTCGTACACCACGGTGGAGGACTGGCAGACGTCCATCGACG
TCGTCGTGTACGAGGGCGAGCGCCGTTCTGTGGACACGTGCAACAAGCTC
GGGGAGTTCACCATTACCGGTGTGGAACGGGCGCGCAAGGGGGAACCCAA
GGGCGAGCGCCGTTCTGTGGACACGTGCAACAAGCTCGGGGAGTTCACCA
TTACCGGTGTGGAACGGGCGCGCAAGGGGGAACCCAAGGTGGAGGTAACC
TTCGCCTTGGACGCCAACGGCATCCTGGCCGTAACGGCGCAGGACACGGT
AACGGGGGCGAAGGCGGGCGCGGAGATCAAGGCCAAGGACGGGCGACTGT
CTGCCGACGAGATCGACAAGATGGTCCAGGACGCGGAGAAGCACAGGGCG
CAGGACGACGAGCTTGCCGACAAGGTGGAGGTAACCTTCGCCTTGGACGC
CAACGGCATCCTGGCCGTAACGGCGCAGGACACGGTAACGGGGGCGAAGG
CGGGCGCGGAGATCAAGGCCAAGGACGGGCGACTGTCTGCCGACGAGATC
GACAAGATGGTCCAGGACGCGGAGAAGCACAGGGCGCAGGACGACGAGCT
TGCCGACAAGATGACCATGCAGACGGCCTTGGAAGGGGCGGTCTACTCGG
CTCTCAGCGCCGCGCGCACTAAGGGCGACACCGACCAGGTGGCCGCTCTG
GAGAACGTGCGCGACTGGCTAGACTACGACTCGACCAACGCCACCCTCAC
CGAGATGACGGCGAAAGCTGACTTCCTGAGGAACAACTTGGGCGTGGCGG
TGAACACGGACTAGATGACCATGCAGACGGCCTTGGAAGGGGCGGTCTAC
TCGGCTCTCAGCGCCGCGCGCACTAAGGGCGACACCGACCAGGTGGCCGC
TCTGGAGAACGTGCGCGACTGGCTAGACTACGACTCGACCAACGCCACCC
TCACCGAGATGACGGCGAAAGCTGACTTCCTGAGGAACAACTTGGGCGTG
GCGGTGAACACGGACTAG
back to top