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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 687 |
| Model size | 1068 |
| Exons | 4 |
| Ec32 ortholog | Ec-11_001740.2 |
| Ec32 ortholog description | expressed unknown protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1124.828.1 >prot_E-siliculosus-1a_F_contig1124.828.1 ID=prot_E-siliculosus-1a_F_contig1124.828.1|Name=mRNA_E-siliculosus-1a_F_contig1124.828.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=229bp
MTRSSDSKLIKSTCKSVMRNVGALDDKELEEGDSQLLGLITGCLCHQMLS
LGEDQIKLVFDFHARLVERHIKHASRDMNIWGVKQVHRLIYLTNWHRWYV
KAYRVEGAGSQECNGIYRVSPEDAARPPQTPYHDPAATLASPALVPQSRE
PPAYFLDEEGGRALSRRDTGPYQNPGWYISNENGAHQSRGSGTDLYCQPY
RLLYPVGIHTPDPAGWDTVCDVQRMLFY* back to topmRNA from alignment at E-siliculosus-1a_F_contig1124:31724..33649- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1124.828.1 ID=mRNA_E-siliculosus-1a_F_contig1124.828.1|Name=mRNA_E-siliculosus-1a_F_contig1124.828.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1926bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1124:31724..33649- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGATGGCGCGTAAACCTGCTGCATAGCAGCGAAATCAACGATTATGGATG
GTTCGAAGACTACGCGTGCCCTACATGCAAGACGAACGGCGAGCAATCAA
CCCGCAGAGAGGAAGGGAATCCAAATGACCAAACCCAAAGGTCGTCGACG
AACGAACTCTTTGCAGAGGGCGCTTACATTCTCTGGGACACCATGACCCG
CTCATCAGATTCCAAACTCATTAAGAGTACCTGCAAATCGGTCATGAGGA
ACGTTGGTGCCCTGGATGACAAGGAACTCGAGGAGGGTGACTCGCAGGTA
TTGATGGGATGCTCGCTTTGACGCTCAGGTTGTTTTTTGAAAGGATGTGC
GTGTATGCTGTACCTTACCCTGCCCGCCTCCTTACACTCTGCTTTCGTCA
TGCATACCCCCTCGCGTGGGCGCCGCTATTCCATGCCTCGTCTGTCGACT
GTTAGTTGCTGGGGCTCATCACGGGGTGTCTCTGTCACCAAATGCTATCT
CTGGGGGAGGACCAGATCAAATTGGTGTTCGATTTCCACGCAAGGCTGGT
AGAACGGCACATCAAGCATGCTTCCCGCGATATGAACATCTGGGGAGTCA
AGCAAGTGCATAGGTTAATCTATCTGACCAACTGGCACCGCTGGTACGTC
AAGGCTTATCGGGTGAGCGATAATTCAGTCCCAAGCAGGCACGAGCAAGA
GCCGTCATCCCATGCAACCTCAGCAGAAAGTCTTTTAGCTTGGAATCGAG
TCCATGAGAATACCCGTAGCTCTCGCAACTCGCTTGAACCTATGACATAC
AGGAACCCATCGGTGGCTAAGGAGATGAGTTGCGCCTTCATGTTTCCTTG
TTTCTTTTTTGTGGCATGTCTCAACAGGTCGAGGGTGCGGGTTCGCAGGA
ATGTAACGGAATCTACCGTGTTTCGCCGGAAGATGCGGCGCGCCCTCCAC
AAACACCGTACCACGATCCGGCGGCGACACTCGCTAGTCCCGCTTTAGTC
CCGCAGAGCAGGGAACCTCCGGCCTACTTTCTTGACGAAGAGGGAGGTCG
CGCACTGTCACGAAGGGACACCGGGCCCTACCAAAACCCTGGCTGGTACA
TCAGGCGAGTGCCACATGCGGAAAGACTCCACGCGGCCGCCGCCGGAGCA
GGGGGAGTGGGGGTTAGTCGTGTGCGTGCTTTTTTAGCATGCCTTGTAGC
CGTTGTTCCGCGTCTTGGCGGCTTTTTGTTCTTTTGAAAAGGTGGACGCG
GGTGGTTTGCTGAAGCGCGCGGGACAATGGGTGCTCTAGCAGGCCTGTTG
AGCTCTGAGCTCTTCTGTGGTGATAGAAGATAACCCGAGGATTCGTATTT
GATTGCGGCCACTTGCCTTAGCTTCGTTGTCGAGGCAGCAGCTGACCCGC
TGAAGTAGTTGTTGTTTTGACTGGTTGGGATGTTTTGCGTTTGAAAGCCT
AGGTCGCTCGTTGCGTTTTAGTACCTTCACATTTTACATGTCATGTGCAT
GCGGACATCTTCGACGTCATGAGTTGAGGAAAAGCGAGCTCCCATCCCTC
GCGATCGTTTACTCTCTGCGCACGCTCTTGAACTGCCAGTAACGAAAATG
GTGCTCACCAAAGCCGAGGGTCGGGGACGGATCTGTACTGCCAGCCCTAC
CGTCTGTTGTATCCCGTGGGTATACATACACCTGACCCTGCTGGCTGGGA
CACGGTATGTGACGTCCAGAGAATGTTATTTTATTAGAGCGAAGCGAGAT
TTCTAACCTGGCCTGAGGTCTCGCAGCAATACACGGCTCCATCCCCCCAA
AAACCTTTGCCAAGTCTGTTCGAATAATCTAGGTATTAGACTACGGTACA
TCACCTCTGAATATAAGGGGGTTCAGTGAGCACATTTCTTTTTTCAGACC
ACACGGGGGATTGCAGCAGACAACAC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1124:31724..33649- >mRNA_E-siliculosus-1a_F_contig1124.828.1 ID=mRNA_E-siliculosus-1a_F_contig1124.828.1|Name=mRNA_E-siliculosus-1a_F_contig1124.828.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1374bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1124:31724..33649- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACCCGCTCATCAGATTCCAAACTCATTAAGAGTACCTGCAAATCGGT
CATGAGGAACGTTGGTGCCCTGGATGACAAGGAACTCGAGGAGGGTGACT
CGCAGATGACCCGCTCATCAGATTCCAAACTCATTAAGAGTACCTGCAAA
TCGGTCATGAGGAACGTTGGTGCCCTGGATGACAAGGAACTCGAGGAGGG
TGACTCGCAGTTGCTGGGGCTCATCACGGGGTGTCTCTGTCACCAAATGC
TATCTCTGGGGGAGGACCAGATCAAATTGGTGTTCGATTTCCACGCAAGG
CTGGTAGAACGGCACATCAAGCATGCTTCCCGCGATATGAACATCTGGGG
AGTCAAGCAAGTGCATAGGTTAATCTATCTGACCAACTGGCACCGCTGGT
ACGTCAAGGCTTATCGGTTGCTGGGGCTCATCACGGGGTGTCTCTGTCAC
CAAATGCTATCTCTGGGGGAGGACCAGATCAAATTGGTGTTCGATTTCCA
CGCAAGGCTGGTAGAACGGCACATCAAGCATGCTTCCCGCGATATGAACA
TCTGGGGAGTCAAGCAAGTGCATAGGTTAATCTATCTGACCAACTGGCAC
CGCTGGTACGTCAAGGCTTATCGGGTCGAGGGTGCGGGTTCGCAGGAATG
TAACGGAATCTACCGTGTTTCGCCGGAAGATGCGGCGCGCCCTCCACAAA
CACCGTACCACGATCCGGCGGCGACACTCGCTAGTCCCGCTTTAGTCCCG
CAGAGCAGGGAACCTCCGGCCTACTTTCTTGACGAAGAGGGAGGTCGCGC
ACTGTCACGAAGGGACACCGGGCCCTACCAAAACCCTGGCTGGTACATCA
GGTCGAGGGTGCGGGTTCGCAGGAATGTAACGGAATCTACCGTGTTTCGC
CGGAAGATGCGGCGCGCCCTCCACAAACACCGTACCACGATCCGGCGGCG
ACACTCGCTAGTCCCGCTTTAGTCCCGCAGAGCAGGGAACCTCCGGCCTA
CTTTCTTGACGAAGAGGGAGGTCGCGCACTGTCACGAAGGGACACCGGGC
CCTACCAAAACCCTGGCTGGTACATCAGTAACGAAAATGGTGCTCACCAA
AGCCGAGGGTCGGGGACGGATCTGTACTGCCAGCCCTACCGTCTGTTGTA
TCCCGTGGGTATACATACACCTGACCCTGCTGGCTGGGACACGGTATGTG
ACGTCCAGAGAATGTTATTTTATTAGTAACGAAAATGGTGCTCACCAAAG
CCGAGGGTCGGGGACGGATCTGTACTGCCAGCCCTACCGTCTGTTGTATC
CCGTGGGTATACATACACCTGACCCTGCTGGCTGGGACACGGTATGTGAC
GTCCAGAGAATGTTATTTTATTAG back to top
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