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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 804 |
| Model size | 1156 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927630.8091354-CDS-E-siliculosus-1a_F_contig1123:507..1311 | 1622927630.8091354-CDS-E-siliculosus-1a_F_contig1123:507..1311 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1123 508..1311 + |
| 1696318617.6893024-CDS-E-siliculosus-1a_F_contig1123:507..1311 | 1696318617.6893024-CDS-E-siliculosus-1a_F_contig1123:507..1311 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1123 508..1311 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1123.820.1 >prot_E-siliculosus-1a_F_contig1123.820.1 ID=prot_E-siliculosus-1a_F_contig1123.820.1|Name=mRNA_E-siliculosus-1a_F_contig1123.820.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=268bp
MPLSLGGGGGGAFGRGRRYSSSMQHWIMGCPSLFPRRGEVDAGNGPSEYL
SAPPDMKNMMQPHTCSCENELKRTERYDEGRVGCVLVLVVCGIFVGVRSH
TSLRLEENRNIHLFADLHPHTVCRRRTAPHQIFGNEWATDRGWAGLRQEE
ERREAFWILWAKKEKNETKAVGICARPSCVAVRLCSFVWTWRFFVDEREC
SSMNVAGVVWRGEEHYAFFPIYVEAGAKHGVTTSFGTSCDNKRDAYLLRS
ARASGGRCEISRAENEG* back to topmRNA from alignment at E-siliculosus-1a_F_contig1123:238..1393+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1123.820.1 ID=mRNA_E-siliculosus-1a_F_contig1123.820.1|Name=mRNA_E-siliculosus-1a_F_contig1123.820.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1156bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1123:238..1393+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGGGGTCCAACGGCACACTCGGCAATAGATGAGATAAGCGCTTCTGTGC
GGGGGAACAATTGCCCTTAGCCTTCCTTTCGCGCACGCGAGAGAGAGATC
AGCCGCCGTGATTTTGTCTGGGTACAGTAGCACGAAGAAAAGTGGGTGCC
TGACACCTGGTTACTCGTGCATCGGCCGAGGGTAGGTTGTATTTACTGTT
TTGTGACATAGAGAAAACAGCGGGTTGCGGAATATCGTCCAGGGGGGATG
GGGTGTACTCGTAGTCGGCCATGCCGTTGTCGTTAGGAGGGGGGGGGGGG
GGGGCGTTTGGACGAGGACGCAGATACAGCAGCAGCATGCAGCACTGGAT
CATGGGGTGCCCGTCGTTATTTCCACGGCGAGGTGAAGTGGACGCGGGAA
ATGGACCCTCTGAATACCTTTCCGCACCCCCTGACATGAAAAACATGATG
CAGCCGCATACCTGTTCGTGTGAGAATGAATTGAAACGTACAGAACGGTA
CGACGAGGGGCGGGTGGGGTGTGTCCTTGTTTTGGTGGTGTGTGGAATTT
TTGTTGGTGTTCGTTCTCATACTTCACTCCGGCTGGAGGAAAATAGAAAC
ATTCATTTGTTTGCGGATCTTCATCCCCACACGGTTTGTAGGAGGCGAAC
GGCCCCGCACCAAATATTTGGGAACGAGTGGGCAACTGATAGAGGGTGGG
CTGGACTAAGACAAGAAGAGGAGAGACGGGAGGCATTTTGGATCTTGTGG
GCGAAAAAGGAAAAAAACGAAACAAAAGCGGTGGGCATTTGCGCTCGCCC
GTCCTGTGTTGCCGTTCGTTTGTGTTCTTTCGTTTGGACGTGGAGATTCT
TTGTAGACGAGAGAGAGTGTTCTTCGATGAATGTAGCGGGCGTCGTGTGG
AGGGGAGAAGAGCACTATGCTTTCTTTCCTATCTATGTAGAAGCAGGTGC
AAAACATGGCGTTACGACGTCGTTTGGAACTAGCTGTGATAACAAGAGGG
ATGCTTATCTACTTCGGTCAGCGCGAGCTAGTGGAGGACGTTGCGAGATC
TCGCGAGCTGAAAACGAAGGCTAAATACGTAACAAGAAAATGCATACTCC
GTTCTGTATTCAACGGCAGCAGTCGGAACGTCTTACACTTCAATAGATGA
CGAAAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1123:238..1393+ >mRNA_E-siliculosus-1a_F_contig1123.820.1 ID=mRNA_E-siliculosus-1a_F_contig1123.820.1|Name=mRNA_E-siliculosus-1a_F_contig1123.820.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1608bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1123:238..1393+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGTTGTCGTTAGGAGGGGGGGGGGGGGGGGCGTTTGGACGAGGACG
CAGATACAGCAGCAGCATGCAGCACTGGATCATGGGGTGCCCGTCGTTAT
TTCCACGGCGAGGTGAAGTGGACGCGGGAAATGGACCCTCTGAATACCTT
TCCGCACCCCCTGACATGAAAAACATGATGCAGCCGCATACCTGTTCGTG
TGAGAATGAATTGAAACGTACAGAACGGTACGACGAGGGGCGGGTGGGGT
GTGTCCTTGTTTTGGTGGTGTGTGGAATTTTTGTTGGTGTTCGTTCTCAT
ACTTCACTCCGGCTGGAGGAAAATAGAAACATTCATTTGTTTGCGGATCT
TCATCCCCACACGGTTTGTAGGAGGCGAACGGCCCCGCACCAAATATTTG
GGAACGAGTGGGCAACTGATAGAGGGTGGGCTGGACTAAGACAAGAAGAG
GAGAGACGGGAGGCATTTTGGATCTTGTGGGCGAAAAAGGAAAAAAACGA
AACAAAAGCGGTGGGCATTTGCGCTCGCCCGTCCTGTGTTGCCGTTCGTT
TGTGTTCTTTCGTTTGGACGTGGAGATTCTTTGTAGACGAGAGAGAGTGT
TCTTCGATGAATGTAGCGGGCGTCGTGTGGAGGGGAGAAGAGCACTATGC
TTTCTTTCCTATCTATGTAGAAGCAGGTGCAAAACATGGCGTTACGACGT
CGTTTGGAACTAGCTGTGATAACAAGAGGGATGCTTATCTACTTCGGTCA
GCGCGAGCTAGTGGAGGACGTTGCGAGATCTCGCGAGCTGAAAACGAAGG
CTAAATGCCGTTGTCGTTAGGAGGGGGGGGGGGGGGGGCGTTTGGACGAG
GACGCAGATACAGCAGCAGCATGCAGCACTGGATCATGGGGTGCCCGTCG
TTATTTCCACGGCGAGGTGAAGTGGACGCGGGAAATGGACCCTCTGAATA
CCTTTCCGCACCCCCTGACATGAAAAACATGATGCAGCCGCATACCTGTT
CGTGTGAGAATGAATTGAAACGTACAGAACGGTACGACGAGGGGCGGGTG
GGGTGTGTCCTTGTTTTGGTGGTGTGTGGAATTTTTGTTGGTGTTCGTTC
TCATACTTCACTCCGGCTGGAGGAAAATAGAAACATTCATTTGTTTGCGG
ATCTTCATCCCCACACGGTTTGTAGGAGGCGAACGGCCCCGCACCAAATA
TTTGGGAACGAGTGGGCAACTGATAGAGGGTGGGCTGGACTAAGACAAGA
AGAGGAGAGACGGGAGGCATTTTGGATCTTGTGGGCGAAAAAGGAAAAAA
ACGAAACAAAAGCGGTGGGCATTTGCGCTCGCCCGTCCTGTGTTGCCGTT
CGTTTGTGTTCTTTCGTTTGGACGTGGAGATTCTTTGTAGACGAGAGAGA
GTGTTCTTCGATGAATGTAGCGGGCGTCGTGTGGAGGGGAGAAGAGCACT
ATGCTTTCTTTCCTATCTATGTAGAAGCAGGTGCAAAACATGGCGTTACG
ACGTCGTTTGGAACTAGCTGTGATAACAAGAGGGATGCTTATCTACTTCG
GTCAGCGCGAGCTAGTGGAGGACGTTGCGAGATCTCGCGAGCTGAAAACG
AAGGCTAA back to top
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