mRNA_E-siliculosus-1a_F_contig1122.814.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI) HSP 1 Score: 1583 bits (4099), Expect = 0.000e+0 Identity = 976/1119 (87.22%), Postives = 991/1119 (88.56%), Query Frame = 1
Query: 25 MLFLPWPSGQFRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQGWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELSHFPAAWGSGASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLVHLQSSSPWLPELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTGSVDDALALYYYCDGSGSSGCGGNVSSVAAPLLRVLKMDGNDLTGSPPRVVDTDNRRIDLLDVSNNGNFVGEVPASYSELLILFADNTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENIAAVTLDHAYDGYSVCTCNDGFQGSGGDSECSECPLRSYRNLEEEDDPLAEGVCSPCPPNSTTLQNGSWLKSQCVCATNFYDEQGGAGSDPSCVACPSGSRTLTAGAVNITSCECEPGRIFNTTSGACEGCAAGTYKPAYGNHIGLXXXXXXXXXSDTVGATSQSDCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVANEGSAECTDEFSEDGTLIGLYLLIAGIILVVFTLLGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQEERMYGLAITGNNMLYYEKQFTILQIMSQKRTCRIHVPFDRGNKYLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLMTQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCEDENISPEAQKEATQKANALSAVRVASTRSPGRSVTSGDIGRGKSPPWSKRGSAESRGSNTLSMSNTNAGDSNGHKLAENDSTATNNDRXXXXXXXXXXXXXXXXXXXXXXXQPEEHAAKGDATAGDNSRSRPSSTTWRIFRGSKGNGGDKXXXXXXXXXXXXXXXXXXXXKILPSEGGSDPDANGGGEAMTDPLVLPTQQLSTHLDEEGL 3381
MLFLPWPSG RALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQ WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLT VISLEE+DLS+NQLSGPVPLNLGMM NME LDLSGNELS+FPAAWGSGASMLRHLSLQNNRISGS PAAWLNVTDSSSYPLVHLQ SSPWLPELRSLLLGGNNMNATGY ALQ VANWRSLQTLDLSDNALTGSVDDALALYYY SPPRVVDTDNRRIDLLDVS+NGNFVGEVPASYSELLILFA+NTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADEN+AAVTLDHAYDGYSVCTCNDG QGSGGDSECSECPL SYRNLE+EDDPLAEGVCSPCP NSTT+QNGSWLKSQCVCA NFYDEQGGA S+PS AVNI SCECEPGRIFNTTS ACE C AGTYKPAYGNH+GL SDTVGATSQ DCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVANEGSAECTDEFSEDGTLIGLYLLIAGIILVVFTL+GVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQE YLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLL+TQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCEDE+ISPEAQKEATQKANALSAVRVASTRSPGRSVTSGDIGRGKSPPWSKRGSAESRGSNTLSMSNTNAGDSNGHK AEN+STATNN XXXXXXXXXXXXXXXXXXXXXXXQPEEHAA+GDATAGDNSRSRPSS TWRIFRGSKGNGGDK XXXXXXXXXXXXXXXXX ILPSEGGSDP ANGGGEAMTDPLVLPTQQLSTHLDEEGL
Sbjct: 1 MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYW--------------------------------SPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYSELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGDSECSECPLGSYRNLEKEDDPLAEGVCSPCPSNSTTMQNGSWLKSQCVCAINFYDEQGGADSEPSXXXXXXXXXXXXXXAVNIASCECEPGRIFNTTSRACESCVAGTYKPAYGNHVGLCLPCSAGTYSDTVGATSQYDCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVANEGSAECTDEFSEDGTLIGLYLLIAGIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQE-------------------------------------------YLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLVTQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCEDEHISPEAQKEATQKANALSAVRVASTRSPGRSVTSGDIGRGKSPPWSKRGSAESRGSNTLSMSNTNAGDSNGHKAAENESTATNNGXXXXXXXXXXXXXXXXXXXXXXXXQPEEHAAEGDATAGDNSRSRPSSATWRIFRGSKGNGGDKSTRXXXXXXXXXXXXXXXXXXILPSEGGSDPGANGGGEAMTDPLVLPTQQLSTHLDEEGL 1044
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: D7FVL7_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI) HSP 1 Score: 169 bits (427), Expect = 3.450e-39 Identity = 82/138 (59.42%), Postives = 107/138 (77.54%), Query Frame = 1
Query: 115 SAYTEEVQIAGLEALYYATNGQGWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELSHFPAAWGSGASMLRHLSLQNNRISG 528
S+Y E Q+ GLEALY AT G+ WA+S+GW D +LGVC WYGV CDS+G NVTG++L+ N L G++SEA +L V+SL +DLS+N+L GPV L G+M ++E+LDLS N+LS+FP +WG+ AS LRHLSLQ N ISG
Sbjct: 28 SSYLETQQV-GLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISG 164
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A2I0WA49_9ASPA (Putative LRR receptor-like serine/threonine-protein kinase n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WA49_9ASPA) HSP 1 Score: 79.7 bits (195), Expect = 2.810e-11 Identity = 59/179 (32.96%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 202 WSD-DSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELSHFPAAWGSGASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLVHLQSSSPWLPELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTG 735
WS +S +CSW GVTC+S GG +T ++L + L G + E + + + L++++L+ N L GP+P N+ +SN+ +LDLSGN + P+ GS S + L L N ++ ++P Y L HL+ ++R + LG N + Y + + SL L LS N+L G
Sbjct: 45 WSPANSASLCSWQGVTCNS-GGRITALNLPSFGLNGTLGEF-NFSALGGLKQLNLNNNLLFGPIPTNISALSNLTLLDLSGNSFTSMPSEIGS-LSEIEELLLFQNNLAVAIP-----------YQLSHLR-------KVRRIDLGSNYLTNPDYKMFEAMP---SLVNLSLSLNSLDG 199
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A5N6MP08_9ASTR (LRRNT_2 domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MP08_9ASTR) HSP 1 Score: 75.5 bits (184), Expect = 5.030e-10 Identity = 62/220 (28.18%), Postives = 99/220 (45.00%), Query Frame = 1
Query: 199 GW--SDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELS-------HFPAAWG-------------SG----ASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLVHLQSSSPWL-----------PELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTGSVDD 747
GW + SL C+W G+TCD G + + L L G +S++ ++ + L+ +++S N L GP+P++ +SN+E++D SGN + H PA SG +S ++ L N +G +P + N L HL +S +L P LR L L NNM + A+ + N L LD+S N + G + D
Sbjct: 190 GWHVNSSSLSCCNWEGITCDLSSGRIVRLELPKKRLTGSLSDS--ISDLDQLKTLNISHNLLKGPIPVSFFHLSNLEVVDFSGNNFNGVLPVSIHLPAXXXXXXXXXXXXXXXXSGLCVNSSRIQVLIFDLNHFNGVIPHGFQNCNF-----LEHLSMASNFLTGVIPGFLLMLPRLRELSLQ-NNM----FTAINEIGNSSQLVRLDVSHNRIFGKIPD 397
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A5N6MNW2_9ASTR (LRRNT_2 domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MNW2_9ASTR) HSP 1 Score: 74.7 bits (182), Expect = 7.350e-10 Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = 1
Query: 205 SDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELS-------HFPAAWG-------------SG----ASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLVHLQSSSPWL-----------PELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTGSVDD 747
+ SL C+W G+TCD G + + L L G +S + ++ + L+ +++S N L GP+P++ +SN+E++D SGN + H PA SG +S ++ L N +G +P + N L HL +S +L P LR L L NNM + A+ + N L LD+S N + G + D
Sbjct: 57 NSSSLSCCNWEGITCDLSSGRIVRLELPKKRLTGSLSNS--ISNLDQLKTLNISHNFLKGPIPISFFHLSNLEVVDFSGNNFNGVLPVSIHLPAXXXXXXXXXXXXXXXXSGLCVNSSRIQVLIFDLNHFNGVIPHGFQNCNF-----LEHLSMASNFLTGVIPGFLLMLPRLRELSLQ-NNM----FTAINEIGNSSQLVRLDVSHNRIFGKIPD 260
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A6N9AAV9_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N9AAV9_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 2.350e-9 Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 142 AGLEALYYATNGQGWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVG----DVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELSHFPAAWGSGASMLRHLSLQNNRI 522
A LEA YYATNG W N+T W D V WYGV D + GNV G+ + N L G ++++ ++L ++ E E L+GP+P LG +SN+ +L L NE LSL NR+
Sbjct: 178 AALEAFYYATNGPEWKNNTNWLSDKP-VGQWYGVETD-DSGNVVGLDFNKNGLRGRLPVELADLSNLKKLFLWGEWG-GEPNLTGPIPPELGALSNLTVLVLGNNEXXXXXXXXXXXXXXXXRLSLVQNRL 305
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: UPI00202486CA (receptor-like protein 7 n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI00202486CA) HSP 1 Score: 71.2 bits (173), Expect = 3.770e-9 Identity = 64/227 (28.19%), Postives = 97/227 (42.73%), Query Frame = 1
Query: 184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQL-------------------------SGPVPLNLGMMSNMEILDLSGNELS----HFPAAWGSGASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLV--HLQSSSP----WLPELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTGSVDDALAL 759
W N S CSW GV CD E GNV G+ LS++ L G ++ + L ++ L ++LS+N SG VP + MSN+ LDLS N L + + + ++ L L+L + IS +P N T + L LQ P LP L +L +G N+ N +GY L L+ L+L +GS+ ++ +
Sbjct: 71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLFNLVHLRRLNLSDNHFNYSLIPTSIGQFSEMTHLDLSASAFSGQVPFEISNMSNLSSLDLSENYLKLKNPNMRSLVQNLSTGLEILNLNHVLISSKIPDFLANFTSLTLLGLYDCELQGEFPAKIFQLPNLENLSIGSNS-NVSGY--LPEFLRPSPLKILNLEGTRFSGSLPSSIQM 294
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A7S2V9M6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9M6_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 4.130e-9 Identity = 65/207 (31.40%), Postives = 93/207 (44.93%), Query Frame = 1
Query: 148 LEALYYATNGQGWANSTGWSDDSLGVCSWYGVT--CDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQLSGPVPLNLGMMSNMEILDLSGNELSHFPAAWGSGASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLVHLQSSSPWLPELRSLLLGGNNMNATGYAALQ--TVANWRSLQTLDLSDNALTGSVDDALA 756
L LYYAT G W ++TGW S C+WYG T D+ N LS+N+ + L+ + L G +P L ++ + LSGN+L PA + S ++ L L +N+++G LP N +DSS + L L+L N N T LQ + L TLDLS N LTG++ D +A
Sbjct: 121 LATLYYATGGPQWKDTTGWLS-SASECTWYGQTPRIDTHAPNSALCDLSDNV-----------------RYLVLNNHNLIGTLPPELALLREIREWRLSGNDLQG-PAPRLATWSFVQLLDLSDNQLTGPLPLPQDNASDSSLFGA-----------SLTELVLNDNLFNDT----LQEFNLTRVSQLSTLDLSRNLLTGALPDTMA 293
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A6P4BSD3_ZIZJJ (receptor-like protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4BSD3_ZIZJJ) HSP 1 Score: 72.4 bits (176), Expect = 5.380e-9 Identity = 64/227 (28.19%), Postives = 99/227 (43.61%), Query Frame = 1
Query: 184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQL-------------------------SGPVPLNLGMMSNMEILDLSGNELS----HFPAAWGSGASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLV--HLQSSSP----WLPELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTGSVDDALAL 759
W N S CSW GV CD E GNV G+ LS++ L G ++ + L ++ L ++LS+N SG VP+ + MSN+ LDLS N L + + + ++ L L+L + IS +P N T + L LQ P LP L++L +G N+ N +GY L L+ L+L +GS+ ++ +
Sbjct: 71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLYNLVHLRRLNLSDNHFNYSLIPTSMGQFSEMTHLDLSASAFSGQVPIEISNMSNLSSLDLSENYLELKNPNMRSLVQNLSTGLEILNLNHVLISSEVPDFLANFTSLTFLGLYDCELQGEFPAKIFQLPNLQNLYIGANS-NLSGY--LPEFLRASPLKILNLEGTRFSGSLPSSIQM 294
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Match: A0A6P4A5W4_ZIZJJ (receptor-like protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4A5W4_ZIZJJ) HSP 1 Score: 72.0 bits (175), Expect = 5.920e-9 Identity = 64/227 (28.19%), Postives = 98/227 (43.17%), Query Frame = 1
Query: 184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTRVISLEEVDLSENQL-------------------------SGPVPLNLGMMSNMEILDLSGNELS----HFPAAWGSGASMLRHLSLQNNRISGSLPAAWLNVTDSSSYPLV--HLQSSSP----WLPELRSLLLGGNNMNATGYAALQTVANWRSLQTLDLSDNALTGSVDDALAL 759
W N S CSW GV CD E GNV G+ LS++ L G ++ + L ++ L ++LS+N SG VP+ + MSN+ LDLS N L + + + ++ L L+L + IS +P N T + L LQ P LP L +L +G N+ N +GY L L+ L+L +GS+ ++ +
Sbjct: 71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLYNLVHLRRLNLSDNHFNYSLIPTSMGQFSEMTHLDLSASAFSGQVPVEISKMSNLSSLDLSENYLELKNPNMRSLVQNLSTGLEILNLNHVLISSEVPDVLANFTSLTLLGLYDCELQGEFPAKIFQLPNLENLSIGSNS-NLSGY--LPEFLRPSPLKILNLEGTRFSGSLPSSIQM 294 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1122.814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1122.814.1 >prot_E-siliculosus-1a_F_contig1122.814.1 ID=prot_E-siliculosus-1a_F_contig1122.814.1|Name=mRNA_E-siliculosus-1a_F_contig1122.814.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1128bp MTPFRLCHMLFLPWPSGQFRALWAAVATAGYLCPTAFASAYTEEVQIAGLback to top mRNA from alignment at E-siliculosus-1a_F_contig1122:9598..19145- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1122.814.1 ID=mRNA_E-siliculosus-1a_F_contig1122.814.1|Name=mRNA_E-siliculosus-1a_F_contig1122.814.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9548bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1122:9598..19145- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1122:9598..19145- >mRNA_E-siliculosus-1a_F_contig1122.814.1 ID=mRNA_E-siliculosus-1a_F_contig1122.814.1|Name=mRNA_E-siliculosus-1a_F_contig1122.814.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6768bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1122:9598..19145- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |