mRNA_E-siliculosus-1a_F_contig1121.809.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1121.809.1 vs. uniprot
Match: D7FY03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY03_ECTSI) HSP 1 Score: 1894 bits (4907), Expect = 0.000e+0 Identity = 1555/1840 (84.51%), Postives = 1571/1840 (85.38%), Query Frame = 1
Query: 1 MLKRPNPYRKSRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDERYRQKLSWCALDEETGQLDYLTEGLSPKGGRRMSTSSVGSSRTGGGGXXXXXXERDHDRDSLLSNQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--CDDDAASTSTRGEDPAAGFLSPSRFRPPPSSTSPRFMSPPIGEGXXXXGTAKAHSGRSWKAPQFAMDLDNHGPGVLLEHSPTRHGHTGLQQQRRRAAASDEAFPVSGGGTRSLSPSPALHRXXXXXXXXXXXXXXXXXXXXKNGSGPRRSIXXXXXXXXGRRSSNSAFSLGTGPVRGPGSWTRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPEKGRGRTAERAEQGCARAPQQQLTSAPEGDEAENEERGEYPVQPRVGVDDEVTGVGASGGTDVCSGATASAXXXXXXXXXXXKREEKSLAGEDDKVGGAASTANPGREASYGTVTSSVFCSGVGDARGSLLASFNTLPRKSLESTYFESNASVAVAVPSASGXXXXX----VVGGDAGQPFSTAGGDTGAGRTPAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAREPGADMVVGHAVDPAALVRPPRVGDGKLEHDKERRLGVANDLEAVIAELNRRKSLLAWEDGEGAASDRCESPTRATEGGGG--VGAGKETRQEEKGEGEDEPSLSARGTPQPSAKSGAERGTVDDEPVQVARVPASEDAFGERKLNEATPLAGQAVEPAAASXXXXXXXXXXXXSSLFGGDENKPPPLTEEPSXXXXXXXXXXXXXXXXXXXXXVAVSTAMLPPSAALRGAGASLSARTLASAAAAA-ATGFDSCSSSSTTAQLGLPKERVEARADGAASGRVGGRGWRQGREATAPVSPRSAPTAKATRAGVSTTPTKENAGDRRVKDYSAPRPMPSAXXXXXXXXXXXXXXXXXXXXXAGAKAGSPRTAAKAGFTSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAAPAPAGYSAPTKSSKARVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSSLQPQQLRRVGSQQRRQKERQSPRSKEAGDRRGRDRVRGPEESNSXXXXXXXRLSSSAPPPELRDGGLSSARVEGMCADIITPSDLVTSAQEQVKGAPPLSGVPASASSSFSSTTPRPARGHHRRSTSAGMLPRSIDEGVMDPAVELADAAMTLSGVRASGGAAEDGRARRGAVGRGTARERVKGGGGSFDRRSMVGAXXXXXXXXXXX--RKGKYQVKDSFNRLKGWINGGFTGNGGRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ARAVNKSVDKRSASAVGGGCPSTATAXXXXXXXTAGVGNRNGDSKNFAASTAVDRAAARVEARRATERDAVRAAKXXXXXXXXAGTAKGAKPSPRAAAAGAIRRNKPHKRTPSGSRASPSGAXXXXXXXXGKAGGVGAPSKAXXXXXXTESAAGSDPHRGRARSRVLEVATXXXXXXXXXXXXLSPLATRLSPAHKEEVTAAVKAAAXXXXXXXXXAGVLPRKVRAVPXXXXXXXXXXXXXSPASERMAVVPPAPSSTGPSARFKTSKAARSLGATIPTLSPASLPRAGSRSRVPVESPGPLRSPRGGGGLRSASRSPRSMXXXXXXXXXXXXSGGVGRERGFFFGGXXXXXXXGKPARTVAGSRGAAXXXXXXXXXXXXMLSRNGPQSVRGGSRGDNGSS---MVVSKGGKAGRTVRAT 5463
MLKRPNPYRKSRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDERYRQKLSWCALDEETGQLDYLTEGLSPKGGRRMSTSSVGSSRTGG XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CDDDAASTSTRGEDPAAGFLSPSRFR PPSSTSPRFMSPPIGEG GTAKAHSGRSWKAPQFAMDLDNHGPGVLLEHSPTRHGHTGLQQQRRRAAASDE+FPVSGGGTRSLSPSPALHR KNG G XXXXXXXX RRSSNSAFSLGTGPVRGPGSWTRG XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXP E+GRGRTAERAEQGCARAP QQLTSAPE DEAENEERGE PVQPRVGVDDEVT VGASGGTDVC GA AS K EEKS AGEDDKVGGAASTANPGREASYGTVTSS FCSGVGDARGSLLASFNTLPRKSLESTYFESNASVAV VPSAS XXXXX VV G AG+P S +GGDTGAGRTPA G XXXXMAR PGADMVVGHAVDPAALVRPPRVGDGKLEHDKERRLGVANDLEAVIAELNRRKSLLAWEDGEGA SD CESP RATE GGG VGAGKETRQEEKGE EDE LSARGT Q SA SGAERG VDDEPV+VARV ASEDAFGERK NEATPLAGQAVEPAAAS SS FGGDENKPPPLTEEPS XXXXXXX VA ST MLPPSAA RGAGASLSARTLASAAAAA ATGFDSCSSSSTTAQLGLPKERVEARADGAA+GRVGGRGWRQGREATAPVSPRSAPTAKAT AGVSTT TKENAGDRRVK SAPR XXXXXXXXXXXXXXXXXXXXXAGAKAGSPRTAAK+GF SAQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAAPAPAGYSAPTKSSKARVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q LRRVGS QKERQSPRSKEA DRRGRDRVRGPEESN RLSSSAPPPELRDGGLSSARVEG+CADIITPSDL+TSAQEQV+GAPPLSGVPAS+SSS TTPRPARGHHRRSTSAGMLPRSIDEGVMDPAVELADAAMTLSGVR SGGAAEDGRARRGAV RGTARER KGG GSFDRRSMVG XXXXXXXX RKGKYQVKDSFNRLKGWINGGFTGNGGRKN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARAV+KSVDKRSASAVGG XXXXXXXTAGVGNRNGDS+N ASTAV+RAAARVEARRA ERDA XXXXXXXX GTAKGAKPSPRAA AGAIRRNKPHKRTPSGSRASPS A XXXXXXX KAGGVGAP+KA TESAAGSDPHRG XXXXXXXXXXXXLSPLATRLSPAHKEEVTAAVKAAAXXXXXXXXXAGVLPRKVRAVPXXXXXXXXXXXXXSPASERMAVVPPAPSSTGPSARFKTSKAARSLGATIPTLSPASLPRAGSRSRVPVESPGPLRSPRGGGGLRSASRSPRS XXXXXXXXXXXXSGGVGRERGFFFGGXXXXXX GKPARTVAGSRGAAXXXXXXXXXX MLSR+GPQS RGGSRGDNGSS MVVSKGGKAGRTVRAT
Sbjct: 1 MLKRPNPYRKSRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDERYRQKLSWCALDEETGQLDYLTEGLSPKGGRRMSTSSVGSSRTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDDAASTSTRGEDPAAGFLSPSRFRLPPSSTSPRFMSPPIGEGGGGGGTAKAHSGRSWKAPQFAMDLDNHGPGVLLEHSPTRHGHTGLQQQRRRAAASDESFPVSGGGTRSLSPSPALHRHNMQWARQSPAGTGAGAGAMKNG-GXXXXXXXXXXXXXXRRSSNSAFSLGTGPVRGPGSWTRGXXXXXXXXXXXXXXXXVSSGXXXXXXXXXXXXXXXXXXXXXXXP-EQGRGRTAERAEQGCARAPPQQLTSAPEEDEAENEERGESPVQPRVGVDDEVTEVGASGGTDVCPGAAASVAATA-------KPEEKSWAGEDDKVGGAASTANPGREASYGTVTSSAFCSGVGDARGSLLASFNTLPRKSLESTYFESNASVAVTVPSASXXXXXXXXXXVVWGGAGEPLSASGGDTGAGRTPAATGGQGEGAVKAAEKEEEQAQGPKKGGKSGGGGRSRXXXXMARGPGADMVVGHAVDPAALVRPPRVGDGKLEHDKERRLGVANDLEAVIAELNRRKSLLAWEDGEGAVSDPCESPARATESGGGGDVGAGKETRQEEKGEVEDEHRLSARGTLQASAGSGAERGRVDDEPVRVARVLASEDAFGERKPNEATPLAGQAVEPAAASLAPGVLQTAVVPSSSFGGDENKPPPLTEEPSPXXXXXXXAGADAGAAAD---VAESTTMLPPSAAPRGAGASLSARTLASAAAAAEATGFDSCSSSSTTAQLGLPKERVEARADGAAAGRVGGRGWRQGREATAPVSPRSAPTAKATWAGVSTTLTKENAGDRRVKASSAPRXXXXXXXXXXXXXXXXXXXXXXXXXXAGAKAGSPRTAAKSGFASAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAAPAPAGYSAPTKSSKARVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ---LRRVGSXXXXQKERQSPRSKEAEDRRGRDRVRGPEESNGGASRGCRRLSSSAPPPELRDGGLSSARVEGICADIITPSDLLTSAQEQVEGAPPLSGVPASSSSS---TTPRPARGHHRRSTSAGMLPRSIDEGVMDPAVELADAAMTLSGVRTSGGAAEDGRARRGAVARGTARERGKGG-GSFDRRSMVGGXXXXXXXXASPSPRKGKYQVKDSFNRLKGWINGGFTGNGGRKNNSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRARAVDKSVDKRSASAVGGXXXXXXXXXXXXXXXTAGVGNRNGDSRNLNASTAVERAAARVEARRAAERDAXXXXXXXXXXXXXXGTAKGAKPSPRAAVAGAIRRNKPHKRTPSGSRASPSSATXXXXXXXXKAGGVGAPAKAGTAAPTTESAAGSDPHRGXXXXXXXXXXXXXXXXXXXXXXXLSPLATRLSPAHKEEVTAAVKAAAXXXXXXXXXAGVLPRKVRAVPXXXXXXXXXXXXXSPASERMAVVPPAPSSTGPSARFKTSKAARSLGATIPTLSPASLPRAGSRSRVPVESPGPLRSPRGGGGLRSASRSPRSXXXXXXXXXXXXXSGGVGRERGFFFGGXXXXXXEGKPARTVAGSRGAAXXXXXXXXXX--MLSRSGPQSARGGSRGDNGSSKSPMVVSKGGKAGRTVRAT 1819 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1121.809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1121.809.1 >prot_E-siliculosus-1a_F_contig1121.809.1 ID=prot_E-siliculosus-1a_F_contig1121.809.1|Name=mRNA_E-siliculosus-1a_F_contig1121.809.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1822bp MLKRPNPYRKSRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDEback to top mRNA from alignment at E-siliculosus-1a_F_contig1121:6610..19046+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1121.809.1 ID=mRNA_E-siliculosus-1a_F_contig1121.809.1|Name=mRNA_E-siliculosus-1a_F_contig1121.809.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=12437bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1121:6610..19046+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1121:6610..19046+ >mRNA_E-siliculosus-1a_F_contig1121.809.1 ID=mRNA_E-siliculosus-1a_F_contig1121.809.1|Name=mRNA_E-siliculosus-1a_F_contig1121.809.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=10932bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1121:6610..19046+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |