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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 1218 |
| Model size | 1996 |
| Exons | 3 |
| Ec32 ortholog | Ec-05_002330.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig112.800.1 >prot_E-siliculosus-1a_F_contig112.800.1 ID=prot_E-siliculosus-1a_F_contig112.800.1|Name=mRNA_E-siliculosus-1a_F_contig112.800.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=406bp
MHSDPAMLDADLARVVSRMGIPNGHRKPAELREATEMLLNGARASTEHFR
NQETFFNLGDVVDLLESLLGEGTHHASPVVAAFLEALTASGSAAVLTNRR
YVGNGGLELPYFLLQSVVIGEPWGYNYNNSSGMPHLGSPKDRAFRETCFR
MLARMAFLSAECTLSRGGNHPFMVLLEGNRGSMLPFIEIRMNRVVDFPVN
QSAVLDVLCLMIFVYRALPWSRRQHLADIEHASSVRTPPVDYITQFLVKQ
TMHMMIMVPGFLRELVVDQQLWHVLFAYGIGRIEASRCHLQHQSQDSLGI
SSGETRDAARRLCNVFFRNRQHEERLIRMLKETCLVSTWICGDAQRPLLL
DICRQRRRRVVEAVAAGAPLAFSAAVPELLAFVRGPGVRGKKQRLVAWLE
SNTEG* back to topmRNA from alignment at E-siliculosus-1a_F_contig112:49329..53060- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig112.800.1 ID=mRNA_E-siliculosus-1a_F_contig112.800.1|Name=mRNA_E-siliculosus-1a_F_contig112.800.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3732bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig112:49329..53060- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGTCTTACACTGAAGCGGAGCCTCGCTTCAGTCGGTGGCTTCAGACGTA
TCGCGAAGATCGAGCGGCACACAGCAGGGCTCGAAAGATGCACTCCGATC
CTGCAATGCTCGATGCTGATCTCGCCCGTGTGGTGTCTCGAATGGGCATA
CCAAACGGCCATAGGAAGCCTGCCGAGCTCCGCGAAGCGACCGAAATGCT
GTTAAATGGGGCACGTGCGAGCACGGAACATTTCCGGAACCAGGAGACGT
TCTTCAACCTGGGAGACGTTGTTGATTTATTAGAGTCTCTCTTGGGAGAG
GGCACTCACCACGCAAGCCCAGTGGTTGCGGCATTCTTGGAAGCACTCAC
GGCCAGTGGGTCGGCTGCGGTATTGACCAACCGGCGCTACGTCGGAAACG
GAGGACTAGAACTACCGTACTTCTTACTGCAGTCGGTGGTGATTGGAGAA
CCATGGGGGTACAACTATAACAATTCATCTGGAATGCCCCATCTTGGATC
CCCGAAAGACCGCGCCTTTCGCGAAACTTGTTTCCGAATGTTGGCGCGTA
TGGCGTTCCTCAGCGCTGAGTGCACCCTATCGCGCGGGGGCAACCATCCG
TTCATGGTGCTGCTCGAAGGAAACCGTGGGTCAATGCTCCCGTTCATTGA
AATCCGGATGAACCGCGTTGTTGATTTTCCGGTGAACCAGTCTGCGGTCC
TCGACGTGCTCTGCCTGATGATCTTCGTGTATCGGGCACTTCCGTGGTCC
CGACGGCAGCATCTTGCCGACATAGAGCATGCAAGCAGCGTAAGGACGCC
GCCCGTGGATTACATCACCCAGTTTCTTGTGAAACAGACGATGCACATGA
TGATCATGGTGCCGGGCTTCTTGCGAGAGCTCGTCGTCGACCAACAGCTA
TGGCATGTGCTCTTCGCGTACGGCATTGGAAGAATTGAGGCTTCCCGGTG
CCACCTGCAGCACCAAAGCCAAGACAGTCTTGGTATCAGCTCCGGTGAGA
CAAGGGACGCCGCCCGTCGTCTGTGCAACGTTTTCTTTCGGAATCGGCAG
CATGAGGAAAGATTGATACGGATGCTGAAGGAGACTTGCCTCGTGTCGAC
GTGGATTTGCGGCGACGCTCAGCGCCCCTTGTTGCTAGACATATGCCGAC
AACGCCGCCGGCGAGTGGTGGAGGTGAGGAACAACCCGTGTAACGATGGC
CATTAGCTACGCGCGATAGCTACACGGTCGAGTAACCTCCCATGATTGTT
CGAATATTTCCGCGTTTGATGAACCCGTTCTCGGAACAAGCACTCTTCAC
GACGTTTCGATCTGTGCAAAGACTTTTCGCATGTTCCTACTGTAGCGTGA
TGCAGAGTCACGCGGTTGCGCAGTCAATGTTGTCGGGGGGGTTGACTAGC
CCTATCCGTACGGCCCGTCCGTCCGATTGGTCCTTACGGTAGACTATCGC
GATGCATTGTGTAGGCGACCTAATGGAGTACGGGCGTGTTTGCCGGCTAC
ACCAAGGGTATGCGCCAACGAAGAATTCGGACACATAGCCCATTCCCCCC
CCTGGAGGAGGAAGTTTCGAAACGTTTTCACGAATCACCGAAAAAATACG
ACCCATTCGGTGAGCATTGGTGGCCTTCGGACGTTCTTTTTCGACAATAT
TGAATTACGTCACCCGACCAAGAGCTTGTATGGAGACATACGCACGCACC
ATTACGAGTGCATATTTACGCGCGTACCATACCAATCTGCAGACAAATGT
TATAGTGTGAGTAAAGTGTAGAAAACGCTCGCGACCACTATTAGGTGTGT
TTTTCGTTGGCCCTGTGCAACACGCGAACGAAACGTCCAGGGTGGCAGGC
AGGTGCGGGAAGCGTTTTTGGGTACTTGTTTATCCCCAGGCACGTAGTCC
ATGTATGAAGTGGGCTAGAGCATCGGCCAGGCAATCAGAAGTGGTTTTCG
CGCAAGAGAATCCTAGTAAGCAAGGAGAGGCCATGTTTCCCTGGTCACCC
TCGGCCAGACAGGGGACAGACGGGCTAGAGGCTGCCACGAAGACAGCTGT
GGGGGTCGCGGGGGGTCGGCCACCTCTCAGCGGTCCCGAGGCCCAAAGAT
AACGTTCACACAGAGACAAACGAGAGATCCGAAGCTCAGCGAGAACCTCT
CCGCCTAGAACCCGGGGACACGTTAGGTGGCCTTCCCCCGCTTCCCAAAT
CATCCCGTCCCCCTCCAGCGGCCCAGATTCGATGTGTGCACCTATTTTGT
CTTGGGGTGTTTTCCGCGCATACCCTAGGCTACACGTTTCGTAGTGTGTT
TGAGTTGCACGCTTTCTAATATTGGCCCTCGTTGTTGATAAACGGGATTC
AGGCGGTGGCTGCGGGCGCGCCTTTGGCGTTTTCTGCCGCCGTGCCTGAA
TTGCTGGCGTTTGTTCGCGGGCCTGGTGTTCGAGGAAAGAAACAGCGACT
TGTCGCATGGTTAGAGTCGAACACTGAAGGCTAGGCGCGTTGGTTCCGAC
TGAATATGCGGTAAGTCGTGCGCAGCGTTTCGGGTTGGTGCCAAGTTCAC
GTGGTTGCTAGGTCTTGCGTGCAGCATTCCTTGGTCGGCGTTGGTCTTCT
TGTGGTGTCGCGTGTAGTGTACCAATTGGAGCTGACCCCCTAACCTTGAG
TATGAATTCGTTCATTTTAACTCTACATGCCACCGTATCTCGTACATCCT
CACCCTCTCCGTCTTGTCGGAACGAAACAATTTCCGTGCTCACCACCTAG
CCCGAAATATGTACAACGAAAAGAATGGTACGGCGCAGTATGTCCTACAC
TGTTTGCCAAGACCCAAACCTTTCCGGCTACCCCGCATAGCTCAATCTCT
TCCCTGCTGGCCAGCCTACCTATCGGGACACACGCGTCCAGAGAAGCCGG
CGATAACCTTCTCTATCTTTTCTTGGGGTACCGTTCGTCGATCGTCGATG
TCCTCCTCCCAGTACAATAGCTCCATCGGAATTGCCCTCGCCTTTTTCGA
CCATCGTTCCCCCTTCGTCGTCCGGACAATGGGTGGGTCTCAACTGCATC
TCCCTTTTGGGTGTCAGGTTCCACGATTTTCCATGGAAGAAAGCTTCCAT
GGCTTTTCCTTGGAAGCAACGGAAAGCTGTCATGGACGTCACTGAAGCTG
CTATGAAAGAACGTGGAAGCTTCCATGGAAGCTATAGAAGGAAGATGGAG
GAAGCTGTCTCGACTACTGTGGCAGTACCCAATGAATGTGCACCCACCAG
CTACCGCCTGATCGCAATGGGAGCTTTCGTGGCTGCCATGGCGTATCACT
TTCATGCGGGGTTTCATGTGGCAGGTGATGCACTTCTTCCATGGGAACCG
GCGAAACTCGGATGACCTCCTCCATGGTGTAGGGGCTCCCATAGAGGAGG
AAGTCGTCGACAAGGTCCAAGTCCTATGCATGCACTTACTTGTAGACTTT
CGTTATCGTAATCCCAACAAGCACGTCGGGTGCTTAAGGTCTCCGTCAAA
GCTGTACTCAGCGCTGATCATTTTTCCGGCTGCGAATCTCCATGGCCGTA
CAAATACTTACATCTAATGTTCTGATAGCGCTGTAAATGTATCTGATTTC
CACGAACTACGCTGAAGTTCCGTTGAGGAAGTTCAAATGTAAGATTGGTA
GGTGTTCTTATGGCATTTGGAGGTAGGCGGGTGATGATGCGTTACCATGA
TCGTTTGGCCTTGTAAGGCGCCATCAGCGTGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig112:49329..53060- >mRNA_E-siliculosus-1a_F_contig112.800.1 ID=mRNA_E-siliculosus-1a_F_contig112.800.1|Name=mRNA_E-siliculosus-1a_F_contig112.800.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2436bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig112:49329..53060- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCACTCCGATCCTGCAATGCTCGATGCTGATCTCGCCCGTGTGGTGTC
TCGAATGGGCATACCAAACGGCCATAGGAAGCCTGCCGAGCTCCGCGAAG
CGACCGAAATGCTGTTAAATGGGGCACGTGCGAGCACGGAACATTTCCGG
AACCAGGAGACGTTCTTCAACCTGGGAGACGTTGTTGATTTATTAGAGTC
TCTCTTGGGAGAGGGCACTCACCACGCAAGCCCAGTGGTTGCGGCATTCT
TGGAAGCACTCACGGCCAGTGGGTCGGCTGCGGTATTGACCAACCGGCGC
TACGTCGGAAACGGAGGACTAGAACTACCGTACTTCTTACTGCAGTCGGT
GGTGATTGGAGAACCATGGGGGTACAACTATAACAATTCATCTGGAATGC
CCCATCTTGGATCCCCGAAAGACCGCGCCTTTCGCGAAACTTGTTTCCGA
ATGTTGGCGCGTATGGCGTTCCTCAGCGCTGAGTGCACCCTATCGCGCGG
GGGCAACCATCCGTTCATGGTGCTGCTCGAAGGAAACCGTGGGTCAATGC
TCCCGTTCATTGAAATCCGGATGAACCGCGTTGTTGATTTTCCGGTGAAC
CAGTCTGCGGTCCTCGACGTGCTCTGCCTGATGATCTTCGTGTATCGGGC
ACTTCCGTGGTCCCGACGGCAGCATCTTGCCGACATAGAGCATGCAAGCA
GCGTAAGGACGCCGCCCGTGGATTACATCACCCAGTTTCTTGTGAAACAG
ACGATGCACATGATGATCATGGTGCCGGGCTTCTTGCGAGAGCTCGTCGT
CGACCAACAGCTATGGCATGTGCTCTTCGCGTACGGCATTGGAAGAATTG
AGGCTTCCCGGTGCCACCTGCAGCACCAAAGCCAAGACAGTCTTGGTATC
AGCTCCGGTGAGACAAGGGACGCCGCCCGTCGTCTGTGCAACGTTTTCTT
TCGGAATCGGCAGCATGAGGAAAGATTGATACGGATGCTGAAGGAGACTT
GCCTCGTGTCGACGTGGATTTGCGGCGACGCTCAGCGCCCCTTGTTGCTA
GACATATGCCGACAACGCCGCCGGCGAGTGGTGGAGATGCACTCCGATCC
TGCAATGCTCGATGCTGATCTCGCCCGTGTGGTGTCTCGAATGGGCATAC
CAAACGGCCATAGGAAGCCTGCCGAGCTCCGCGAAGCGACCGAAATGCTG
TTAAATGGGGCACGTGCGAGCACGGAACATTTCCGGAACCAGGAGACGTT
CTTCAACCTGGGAGACGTTGTTGATTTATTAGAGTCTCTCTTGGGAGAGG
GCACTCACCACGCAAGCCCAGTGGTTGCGGCATTCTTGGAAGCACTCACG
GCCAGTGGGTCGGCTGCGGTATTGACCAACCGGCGCTACGTCGGAAACGG
AGGACTAGAACTACCGTACTTCTTACTGCAGTCGGTGGTGATTGGAGAAC
CATGGGGGTACAACTATAACAATTCATCTGGAATGCCCCATCTTGGATCC
CCGAAAGACCGCGCCTTTCGCGAAACTTGTTTCCGAATGTTGGCGCGTAT
GGCGTTCCTCAGCGCTGAGTGCACCCTATCGCGCGGGGGCAACCATCCGT
TCATGGTGCTGCTCGAAGGAAACCGTGGGTCAATGCTCCCGTTCATTGAA
ATCCGGATGAACCGCGTTGTTGATTTTCCGGTGAACCAGTCTGCGGTCCT
CGACGTGCTCTGCCTGATGATCTTCGTGTATCGGGCACTTCCGTGGTCCC
GACGGCAGCATCTTGCCGACATAGAGCATGCAAGCAGCGTAAGGACGCCG
CCCGTGGATTACATCACCCAGTTTCTTGTGAAACAGACGATGCACATGAT
GATCATGGTGCCGGGCTTCTTGCGAGAGCTCGTCGTCGACCAACAGCTAT
GGCATGTGCTCTTCGCGTACGGCATTGGAAGAATTGAGGCTTCCCGGTGC
CACCTGCAGCACCAAAGCCAAGACAGTCTTGGTATCAGCTCCGGTGAGAC
AAGGGACGCCGCCCGTCGTCTGTGCAACGTTTTCTTTCGGAATCGGCAGC
ATGAGGAAAGATTGATACGGATGCTGAAGGAGACTTGCCTCGTGTCGACG
TGGATTTGCGGCGACGCTCAGCGCCCCTTGTTGCTAGACATATGCCGACA
ACGCCGCCGGCGAGTGGTGGAGGCGGTGGCTGCGGGCGCGCCTTTGGCGT
TTTCTGCCGCCGTGCCTGAATTGCTGGCGTTTGTTCGCGGGCCTGGTGTT
CGAGGAAAGAAACAGCGACTTGTCGCATGGTTAGAGTCGAACACTGAAGG
CTAGGCGGTGGCTGCGGGCGCGCCTTTGGCGTTTTCTGCCGCCGTGCCTG
AATTGCTGGCGTTTGTTCGCGGGCCTGGTGTTCGAGGAAAGAAACAGCGA
CTTGTCGCATGGTTAGAGTCGAACACTGAAGGCTAG back to top
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