mRNA_E-siliculosus-1a_F_contig1119.795.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A6H5KT74_9PHAE (PaO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT74_9PHAE) HSP 1 Score: 483 bits (1242), Expect = 3.300e-170 Identity = 263/295 (89.15%), Postives = 268/295 (90.85%), Query Frame = 1
Query: 49 GGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLALSALLAAXXXXXXXXXXXXXXXXXXXP--GVGGLVAALGSLCSLGLAAAANALEARFYTNFERHPSLG 927
G K A PT II+EGPDAPSSTGFS IVKSRGFGS K+MTSTRYRM APGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDM LICAQEDHVARTGKTLSESFLPIKSSDV+VVELRKWLD VGHGMPFFEGW+KSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVK+VKKGGLALSALLAA XXXXXXXXXXXX GVG LVAALGSLC LGLA AANALEARFYTNFERHPSLG
Sbjct: 7 GATKKTPAPPTSMKIIEEGPDAPSSTGFSCIVKSRGFGSRKKMTSTRYRMQAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMKLICAQEDHVARTGKTLSESFLPIKSSDVMVVELRKWLDRVGHGMPFFEGWQKSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKQVKKGGLALSALLAAASVLLSRXXXXXXXXXXXXAPRGVGSLVAALGSLCLLGLATAANALEARFYTNFERHPSLG 301
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A7S1ZT10_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZT10_9STRA) HSP 1 Score: 199 bits (506), Expect = 9.000e-56 Identity = 118/261 (45.21%), Postives = 160/261 (61.30%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQE--GPDAPSSTGFSSIVKSRGFGSSKEMTSTRYRMHAPGVIRVRSEGKKEGEPL-FGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAADLNDHEDCRRPS--------HRA---FESRYHRHVLICAETRRALATVKRVKKGGLALSAL 741
+L+DPAHIP+SHD T GGG +ENA + + + GPD TG R G + +Y+ APG+IR + + PL FGAALHC+PL GRSRLLF+ Y PP+ + +KPKFL +LNSCKILEQD LI QEDH R+ ++L + ++ + SSDV V R+WLD VGHGMP+F+G + ++++NDH PS HRA E+RYHRHV+ C TR+ALA ++ +KKG LAL+ +
Sbjct: 270 NLIDPAHIPISHDATPGGGKRENAQAYEMIVDRNSIGPDG--FTGRYRTASQREKGD--DFIEVQYQ--APGIIRQKGMPRGNDSPLRFGAALHCMPLTLGRSRLLFRAYFTGLPPLAKLLITMKPKFLGNLNSCKILEQDAGLITTQEDHFKRSKRSLRDDYILLSSSDVFVKSYRQWLDKVGHGMPWFQGL--ATRSSNVNDHLAEIPPSPPGLDPIHHRAGNYVETRYHRHVMHCPTTRKALARIQTLKKGMLALTVV 522
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A8J6CDC8_DIALT (Rieske domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDC8_DIALT) HSP 1 Score: 189 bits (479), Expect = 3.270e-52 Identity = 135/326 (41.41%), Postives = 171/326 (52.45%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTS-TRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVART--GKTLSESFLPIKSSDVLVVELRKWLDHVGH----GMPFFEGWKK-SKEAADLNDHEDCRR-------PSHRAF-ESRYHRHVLICAETRRALATVKRVKKGGLAL--SALLAAXXXXXXXXXXXXXXXXXXXPGVGGLVAALGSLCSLGLAAAANALEARFYTNFERHPSL 924
+LLDPAHIPVSHD+T GGG +ENA P + ++ D G ++ G+++ R APGVI R+ G G FGAALHC+PLG RSRLLF+TY P + LKP +LRHLNSCKILEQD LI +QED +A + G + +LP++S+DV VV RKWLD VG GMP+ GW + +A R P+HRA E RY RHV C TR ALA V+ +K+ AL +A LAA P G L AA+G+ +LG A LE F+ FER L
Sbjct: 225 NLLDPAHIPVSHDRTPGGGKRENAQPLEMEVYDGSVDRTGFRGRYRNTRASSGGATRAPPGWIDVRFAAPGVIYQRNAG---GPIRFGAALHCMPLGASRSRLLFRTYFKGLPRAARLLLALKPLWLRHLNSCKILEQDAGLIASQEDALAASAHGASTGSQYLPLRSADVFVVAHRKWLDLVGASGAGGMPWAVGWDAPAADALHAASPLAARATLAPSLAPAHRAIAEDRYSRHVRHCRATRDALARVRALKRALFALGGAAALAAAALN---------------PAGGSLRAAVGAALALGCALGLRRLERLFFRPFERREQL 532
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A836C985_9STRA (Rieske domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C985_9STRA) HSP 1 Score: 189 bits (480), Expect = 4.700e-52 Identity = 110/247 (44.53%), Postives = 148/247 (59.92%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTSTRYRMHAPGVIRVRSE--GKKEGEP--LFGAALHCIPL------------------GKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQE----------------------------DHVARTGKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAA 591
+L+DPAHIP+SH TEGGGN++NA P FDI + D+ + GF + + + SK T+ ++ AP VIR+R+E GKKEG+P +FGAALHC+ G+GRSR+LF TYA PP+V I+G+KP +LRHLNSCK+LEQD+ LIC+QE DH ARTG+TLS+++LPI +SD LVV+ R+WLD VG GMP+ EG+ + A
Sbjct: 235 NLIDPAHIPISHHNTEGGGNRDNAKPLNFDIDK---DSFGAAGFKAKITNL---FSKGTTAIQF--DAPCVIRLRTETPGKKEGQPGLVFGAALHCVAXXXXXXXXXXXXXXXXXXXGQGRSRILFMTYARRMPPLVKLIFGIKPLWLRHLNSCKVLEQDLGLICSQEXXXXXXXXXEFKRXXXXXXXXXXXXXXXDHFARTGETLSQAYLPIATSDALVVQYRRWLDAVGSGMPYHEGFLSNANVA 473
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A7S2XLJ2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLJ2_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.210e-50 Identity = 110/259 (42.47%), Postives = 148/259 (57.14%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVART-GKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKS--------------KEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLAL 732
+L+DPAH+P+SHD+T GGG +ENA P + + ++ + P GF+ ++ G ++ T + APG+IR + K G+ FGAALHC+PL G+SRLLF+ Y P + KPK+LR+LNSCK+LEQD+ LI QEDH AR G+ L + FL + SSD V R+WLD VGHGMP+F+G + KE A D R + E+RYHRHV C TR AL V R+K L L
Sbjct: 285 NLIDPAHVPISHDRTPGGGKRENAQPYEMILDKDSVNNPQ--GFTGRFRNAGP-DAQNATWFELQYEAPGIIR---QSAKNGKFQFGAALHCMPLSLGKSRLLFRAYFTGLPWFARIMIESKPKWLRNLNSCKVLEQDVGLIATQEDHFARNKGRMLKDDFLLLASSDKFVGAYRQWLDRVGHGMPWFQGLASTSSTQGNNPLHHLNGKELAPGLDGAHHRASNEAVMETRYHRHVQKCPSTRNALKHVIRIKTTCLTL 537
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A7S1VJZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJZ6_9STRA) HSP 1 Score: 177 bits (448), Expect = 5.170e-48 Identity = 109/261 (41.76%), Postives = 150/261 (57.47%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTSTRYRMHAPGVIRVRSEGKKEGEPL-FGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAADLNDHEDCRRPS-----HRA-----FESRYHRHVLICAETRRALATVKRVKKGGLALSALLAA 750
+L DPAH+ +SHD T GGG +E A I Q D+ SS GF+ F ++ + + APG++R + EGK + F AALHC+PLG GRSRLLF+ + P + F+ LKP + RHLNSCK+LEQD+ LI QED+ AR+ + L E +L ++SSD V R+WLD VGHGMP+++G A + + P HRA E+RYHRHV+ C TR AL ++ K+ A +A+LAA
Sbjct: 184 NLADPAHVDISHDSTPGGGKRERAKAYDMKIDQ---DSISSDGFTGK-----FRQNENLPYSDLVFEAPGIVRNKFEGKIGSSTVRFEAALHCMPLGLGRSRLLFRVFNKGLPKLALFLLNLKPLWSRHLNSCKVLEQDVGLITTQEDYFARSKRELKEDYLLLQSSDTYVGAYRQWLDKVGHGMPWYQGLLSHNGGAIRSVPSNTLPPGLEPGYHRASNEDVVETRYHRHVMNCPTTRNALRRIQLGKRISTA-AAILAA 435
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A7S2P399_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2P399_9DINO) HSP 1 Score: 169 bits (429), Expect = 1.390e-47 Identity = 90/193 (46.63%), Postives = 125/193 (64.77%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLK---PKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGW 570
+LLDPAHIPVSHD T GGG + NA P + ++++ ++ VK G + E T + APG++R RS G+ LFGAALHC+PLG+GRSRLLF+ Y P + +++ L+ P ++RHL+SC ILEQD+ LI +QED V RT + + +LP+K++D L+V R WLD VGHGMP+F GW
Sbjct: 82 NLLDPAHIPVSHDGTPGGGKRANAQPLEMEVLETTSQGVRGRFRNTRVK----GGAGEEPWTDIALEAPGIVRWRSA---RGKILFGAALHCMPLGRGRSRLLFRIYT-RLPRPLRWLFKLRTSRPAWMRHLSSCVILEQDVGLITSQEDRVLRTRRAPRDDWLPLKTADTLLVAYRSWLDRVGHGMPYFLGW 266
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A7S1TYS4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYS4_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.610e-43 Identity = 102/264 (38.64%), Postives = 148/264 (56.06%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSRGFGSSKEMTS-----------TRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGL--------KPKFLRHLNSCKILEQDMNLICAQEDHVA-RTGKTLSESFLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLAL 732
+L DPAHIPVSHD+T GGG +ENA P + +++ P S ++ K++ S K+ T T ++ APG++R R E G FG+ALHC+P RSRLLF+TY + G ++ KP +LRHLNSCKILEQD+ LI +QED +A + G+ ++ L +KSSD +++ +R+WLD VG +P ++GW + + P R ESRY RHV + TR AL +K +++ LAL
Sbjct: 208 NLSDPAHIPVSHDRTPGGGKRENAQPLEMEVLDITPTGVESRFRNTRPKAKT--SKKQETEDEAKDENTNAWTEIKIDAPGIVRYRFE--LPGGAAFGSALHCVPSSPYRSRLLFRTYFKGGGGVKGLLFKALFKSKTWYKPMWLRHLNSCKILEQDLGLITSQEDIMASKPGQIWADEALTLKSSDAVLIAVRQWLDGVGPALPHYQGWNSRADPSLPAP------PPDRYMESRYTRHVKVQRSTRNALRRIKWLRQASLAL 461
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A813H4Z8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H4Z8_POLGL) HSP 1 Score: 156 bits (395), Expect = 2.040e-40 Identity = 126/339 (37.17%), Postives = 165/339 (48.67%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSS--TGFSSIVKSRGFGSS--KEMTSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSES---------------------FLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAADLNDHEDCRRPS---------HRAFES-RYHRHVLICAETRRALATVKRVKKGGLALSALLAAXXXXXXXXXXXXXXXXXXXPGVGGLVAALGSLCSLGLAAAANALEARFYTNFER 912
+L+DPAHIP+SHD T GGG +ENA + + DA S +GF+ ++ G+ K T APG++R RS+ G +FG ALHC+PL GRSRLLF+ Y P + +Y LKP++LR+LNSCK+LEQD+ LIC QEDH++ + +E +L + S D V R W D GMP+ GW S AAD+ + HRA + R+ RH C TR AL VKR LAL+A A XXXXXXX AALG++ + LEA FYT F R
Sbjct: 166 NLIDPAHIPISHDATPGGGKRENAQALEMQV-----DASSVGVSGFTGRYRATRLGAKTGKPDPWTETAFEAPGIVRYRSQ---RGNIVFGGALHCVPLAPGRSRLLFRVYFSGLPWIAMLVYSLKPQWLRNLNSCKVLEQDVGLICTQEDHLSGADGSSAEGGSSKGVGXXXXXXXXGGLAGQYLTLASQDTFVKAYRVWQDRFRVGMPWAVGW--SSPAADVAAASPLAASASLGPGLDGAHRALRANRFERHGQHCRATRNALQGVKR-----LALAAQAAGMVAXXXXXXXKAARP-----------AALGAVFCFAASFGLRKLEAEFYTGFRR 478
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Match: A0A813LLZ5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LLZ5_POLGL) HSP 1 Score: 155 bits (393), Expect = 9.190e-39 Identity = 137/339 (40.41%), Postives = 176/339 (51.92%), Query Frame = 1
Query: 1 SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSS--TGFSSIVKSRGFGSS--KEMTSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSES---------------------FLPIKSSDVLVVELRKWLDHVGHGMPFFEGWKKSKEAADLNDHEDCRRPS---------HRAFES-RYHRHVLICAETRRALATVKRVKKGGLALSALLAAXXXXXXXXXXXXXXXXXXXPGVGGLVAALGSLCSLGLAAAANALEARFYTNFER 912
+L+DPAHIP+SHD T GGG +ENA + + DA S +GF+ ++ G+ K T APG++R RS+ G +FG ALHC+PL GRSRLLF+ Y P + F+Y LKP++LR+LNSCK+LEQD+ LIC QEDH++ + +E +L + S D V R W D GMP+ GW S AAD+ + HRA + R+ RH C TR AL VKR LAL+A A XXXXXXXXXXXXXXXXXXX LG++ + LEA FYT F R
Sbjct: 779 NLIDPAHIPISHDATPGGGKRENAQALEMQV-----DASSVGVSGFTGRYRATRLGAKTGKPDPWTETAFEAPGIVRYRSQ---RGNIVFGGALHCVPLAPGRSRLLFRVYFSGLPWIAMFVYSLKPQWLRNLNSCKVLEQDVGLICTQEDHLSGADGSSAEGGSSKGVGXXXXXXXXGGLAGQYLTLASQDTFVKAYRVWQDRFRVGMPWAVGW--SSPAADVAAASPLAASASLGPGLDGAHRALRANRFERHGQHCRATRNALQGVKR-----LALAAQAAGXXXXXXXXXXXXXXXXXXXX--------LGAVFCFAASFGLRKLEAEFYTGFRR 1094 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1119.795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1119.795.1 >prot_E-siliculosus-1a_F_contig1119.795.1 ID=prot_E-siliculosus-1a_F_contig1119.795.1|Name=mRNA_E-siliculosus-1a_F_contig1119.795.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=310bp SLLDPAHIPVSHDKTEGGGNKENASPTQFDIIQEGPDAPSSTGFSSIVKSback to top mRNA from alignment at E-siliculosus-1a_F_contig1119:33600..37269- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1119.795.1 ID=mRNA_E-siliculosus-1a_F_contig1119.795.1|Name=mRNA_E-siliculosus-1a_F_contig1119.795.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3670bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1119:33600..37269- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1119:33600..37269- >mRNA_E-siliculosus-1a_F_contig1119.795.1 ID=mRNA_E-siliculosus-1a_F_contig1119.795.1|Name=mRNA_E-siliculosus-1a_F_contig1119.795.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1860bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1119:33600..37269- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |