mRNA_E-siliculosus-1a_F_contig1119.793.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1119.793.1
Unique NamemRNA_E-siliculosus-1a_F_contig1119.793.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A6H5KZH6_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH6_9PHAE)

HSP 1 Score: 664 bits (1714), Expect = 4.330e-228
Identity = 368/447 (82.33%), Postives = 377/447 (84.34%), Query Frame = 1 
Query:   22 SIDNDDDGLSTWRGKSDSFADRVSSSNPARHRNFGAICEDGEDSDIVAAEIRQEGVLRVASGGPDGDRSGLEKVEMSIVHVRGDGDSENRKNEEMQMLHAADGASDGTADTADGVTDNEDIHTEEDDVSQSHRHPRTDGHDRASNSGSXXXXXXXXISTVLISNSSSISSGCSNDNSGXXGHASANHGVHGVARISSTEKGHLASSVRHNTAAAAAVGGG-IPPCAFRRRGWSSSILAFADATGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINYHEGCEE 1359
            SIDN DD LSTWRGKSDSFADRVSSS+P RHRNFGAICEDGEDSD+VAAEI+QEGVLRVAS                        DSEN KN++MQMLH  DG SDGTADTAD VTDNED+HTEEDD SQSHRHPRT+GHDRA NS  XXXXXXXXISTV  SN+             XXG+ASANHGVHGVA ISST K HLASSVRHN A         IPPCAFRRRGWSSSILAFAD TGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQ CSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTG ACAGNG QRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY E CEE
Sbjct:  288 SIDNADDELSTWRGKSDSFADRVSSSDPVRHRNFGAICEDGEDSDMVAAEIQQEGVLRVASXXXXXXXXXXXXXXXXXXXXXXXXDSENLKNQQMQMLHVVDGGSDGTADTADEVTDNEDMHTEEDDSSQSHRHPRTNGHDRARNSXXXXXXXXXXISTVHTSNNXXXXXXXXXXXXXXXGYASANHGVHGVAGISSTGKDHLASSVRHNAAXXXXXXXXXIPPCAFRRRGWSSSILAFADVTGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQCCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGVACAGNGTQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINYPESCEE 734
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: D7FIF5_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF5_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 5.660e-117
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 1 
Query:  832 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINYHEGCEES 1362
            MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALA+VMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY EGCEES
Sbjct:    1 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAVVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINYPEGCEES 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A6H5KTB4_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB4_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.070e-64
Identity = 122/191 (63.87%), Postives = 145/191 (75.92%), Query Frame = 1 
Query:  766 EDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNIN 1338
            ED  +++L+ RL++EYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDI+EVMARSDNVVRVALTPKHRDVPLLC+ILTYNMGAPPIV PIQVDQ C R+TPPIKDFE+ D++VP G EY     PV ++ +V+ G G A  G     L  G+  FV A +   +     AG ++L V    +N+N
Sbjct:  270 EDYYVQDLMRRLSKEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDIMEVMARSDNVVRVALTPKHRDVPLLCEILTYNMGAPPIVAPIQVDQCCHRFTPPIKDFELDDMKVPEGSEYTPLAIPVPSICMVLEGVGSASDGVRDTVLRPGVVVFVAARSVATFKPD--AG-SSLRVIRTHTNLN 457
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A835YY41_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY41_9STRA)

HSP 1 Score: 211 bits (537), Expect = 4.560e-57
Identity = 106/194 (54.64%), Postives = 145/194 (74.74%), Query Frame = 1 
Query:  766 EDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNG--RQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 1341
            E+ ++ +L+LRL EEYPGDIGIMMPLLLNYLR+  G++FFM ANEPHAYL+GDI+EVMARSDNVVRVALTPK+RDVPLLC ILTY MGAPP+V P +V  +C R+TPP+ DFE+  + +PH Q+++     V ++ +V+ GTG+A   +G   + L  G++ FVPA   V +  +  + +A L V +A +NI++
Sbjct:  258 EERSIHKLMLRLNEEYPGDIGIMMPLLLNYLRLEPGQAFFMGANEPHAYLRGDIMEVMARSDNVVRVALTPKYRDVPLLCDILTYKMGAPPLVLPRRVSPYCLRFTPPVADFELEVVTLPHAQQFSFDSIKVPSIFLVLGGTGWATDDDGGAEKELWSGVSMFVPARCAVNFRAT--STDAPLLVAVAHTNIHW 449
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A0R5QMD0_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD0_SACJA)

HSP 1 Score: 164 bits (414), Expect = 6.900e-40
Identity = 93/207 (44.93%), Postives = 131/207 (63.29%), Query Frame = 1 
Query:  736 ADATGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACA---GNGRQ-RLCRGMAFFVPAETTVVYTNSCVAGEAA-LWVCLARSNINY 1341
            A+A  +R  KE+  +  ++LRL+ EYPGD+GI+MPL+LN L +  G++FFM  +EPHAYL+GDILE MA S+NVVR ALTPK+RDV LL  +L+YNM AP ++ P  VD    R+TPP+ DFE+ DI VP    Y   P PV A+ + + GT          G++     G  FF+PA T        V+G+ + L + +A +N+N+
Sbjct:  265 AEALDKRMKKENPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKYRDVDLLVDMLSYNMAAPAVLHPHTVDDNRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEIEAAAGGIFFLPANTHCTL----VSGKLSELHIAMAHTNLNW 467
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA)

HSP 1 Score: 162 bits (409), Expect = 2.570e-38
Identity = 92/200 (46.00%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:  763 KEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFAC---AGNGRQ-RLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINYHEG 1350
            +ED   + ++LR ++EYPGD+GI+MPL+LN L++  G +FFM  +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++    VD    RYTPPI DFE+  +QVP  + Y      V  + + +AG        + +GR+ + C G  FF+PA T VV  +    G     + +A ++ N H G
Sbjct:  409 REDADSQRVMLRPSKEYPGDLGILMPLMLNLLQLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMEVPVVMVALAGGADGRVIESESGREIKACEGGVFFLPAYTPVVVCS----GTKGDGIKMALAHTNLHWG 604
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A1Y1I1U7_KLENI (Mannose-6-phosphate isomerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1U7_KLENI)

HSP 1 Score: 158 bits (399), Expect = 2.840e-38
Identity = 79/164 (48.17%), Postives = 104/164 (63.41%), Query Frame = 1 
Query:  784 ELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNGRQRLC----RGMAFFVPAET 1263
            +LILRL E+YPGD+G+  P  LNY+ +  GES ++AANEPHAYL G+ +E MA SDNVVR  LTPK RD  +LC +LTYN G P I+    +D    RY PP ++FE+  I+VP G  Y  P  P  ++ +V +G G A  G G  +      +G  FF+PAET
Sbjct:  226 KLILRLNEQYPGDVGVFCPYFLNYITLSPGESIYLAANEPHAYLSGECVECMATSDNVVRAGLTPKLRDTDVLCSMLTYNQGKPEILKGQPIDSHTRRYIPPFEEFEIDSIEVPKGTSYKLPFIPGPSIVLVQSGVGLATQGQGNAQRAFGVKKGDVFFLPAET 389
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 3.570e-38
Identity = 87/179 (48.60%), Postives = 115/179 (64.25%), Query Frame = 1 
Query:  763 KEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNGRQ----------RLCRGMAFFVPAETTV 1269
            +ED   + ++LRL++EYPGD+GI+MPL+LN L +  G +FFM  +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++    VD    RYTPPI DFE+  +QVP  + Y     PV  + + + G      G+G +          + C G  FF+PA T V
Sbjct:  361 REDADSQRVMLRLSKEYPGDLGILMPLMLNLLHLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMPVPVVMVALEG------GDGGRVIESKTDREIKACEGGVFFLPAFTPV 533
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BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: A0A7N0SZV4_KALFE (Mannose-6-phosphate isomerase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0SZV4_KALFE)

HSP 1 Score: 153 bits (387), Expect = 1.340e-36
Identity = 78/180 (43.33%), Postives = 111/180 (61.67%), Query Frame = 1 
Query:  757 RAKEDLALREL------ILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYT 1278
            R + ++ LREL      +LRL E+YPGD+G++    LNY+R+  GE+ ++ ANEPHAYL G+ +E MA SDNVVR  LTPK RDVP LC +LTY  G P I+  + V+ +  +Y PP  +FE+    +P G   A P  P  ++ +VMAG G   A + R+ +  G  FFV A+  ++ T
Sbjct:  240 RLQSEIQLRELKERELLVLRLEEQYPGDVGVISAFFLNYVRLKPGEALYLGANEPHAYLSGECVECMAASDNVVRAGLTPKLRDVPTLCSMLTYKQGHPEILRGVSVNPYIKKYLPPFDEFEVDSCALPQGASTAFPAVPGPSIFLVMAGQGTIEADSLREEIAEGDVFFVAADCEILLT 419
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Match: D8LB30_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB30_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 8.100e-35
Identity = 84/189 (44.44%), Postives = 116/189 (61.38%), Query Frame = 1 
Query:  787 LILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGT--GFACAGNGRQRL--CRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 1341
            ++LRL+ EYPGD+GI+MPL+LN L +  G++FFM  +EPHAYL+GDILE MA S+NVVR ALTPK RDV LL  +LTYNM AP ++ P  +D    R+TPP+  FE+  I VP    Y   P PV A+ + + G   G     +  + +    G  FF+PA T   Y        + L + +A +N+N+
Sbjct:  285 VMLRLSTEYPGDLGILMPLVLNLLMLKTGQAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLTYNMAAPAVLRPHIIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHGAQGGLLLDEDTGKEIPAAEGGIFFLPANT---YCTMVSGKTSDLRIAMAHTNLNW 470
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1119.793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZH6_9PHAE4.330e-22882.33Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
D7FIF5_ECTSI5.660e-11798.87Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A6H5KTB4_9PHAE1.070e-6463.87Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]
A0A835YY41_9STRA4.560e-5754.64Mannose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A0R5QMD0_SACJA6.900e-4044.93Mannose-6-phosphate isomerase n=1 Tax=Saccharina j... [more]
A0A0R5QMD6_SACJA2.570e-3846.00Mannose-6-phosphate isomerase n=2 Tax=Saccharina j... [more]
A0A1Y1I1U7_KLENI2.840e-3848.17Mannose-6-phosphate isomerase n=1 Tax=Klebsormidiu... [more]
D7FPP3_ECTSI3.570e-3848.60Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus T... [more]
A0A7N0SZV4_KALFE1.340e-3643.33Mannose-6-phosphate isomerase n=1 Tax=Kalanchoe fe... [more]
D8LB30_ECTSI8.100e-3544.44Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1119contigE-siliculosus-1a_F_contig1119:1158..4705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1119
Model size2264
Exons4
Ec32 orthologEc-28_000080.1
Ec32 ortholog descriptionMannose-6-phosphate isomerase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
BiGG ReactioniRC1080.CRv4_Au5_s2_g9754_t1
COG Functional cat.G
EC5.3.1.8,6.1.1.18
EggNOG OGsCOG1482@1,KOG2757@2759
EggNOG free text desc.mannose-6-phosphate isomerase activity
GOsGO:0000003,GO:0000032,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0004476,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006002,GO:0006013,GO:0006056,GO:0006057,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006464,GO:0006486,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009225,GO:0009226,GO:0009259,GO:0009260,GO:0009298,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009642,GO:0009646,GO:0009743,GO:0009744,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010154,GO:0014070,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017085,GO:0017144,GO:0018130,GO:0019309,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019673,GO:0019693,GO:0019752,GO:0019852,GO:0019853,GO:0022414,GO:0031505,GO:0031506,GO:0031667,GO:0032025,GO:0032501,GO:0032502,GO:0032787,GO:0033273,GO:0033591,GO:0034284,GO:0034285,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036211,GO:0042221,GO:0042364,GO:0042493,GO:0042546,GO:0042866,GO:0043170,GO:0043412,GO:0043413,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046680,GO:0046686,GO:0046700,GO:0046939,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0061458,GO:0061611,GO:0061615,GO:0061619,GO:0070085,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700
KEGG ModuleM00114,M00359,M00360
KEGG Pathwayko00051,ko00520,ko00970,ko01100,ko01110,ko01130,map00051,map00520,map00970,map01100,map01110,map01130
KEGG ReactionR01819,R03652
KEGG koko:K01809,ko:K01886
KEGG rclassRC00055,RC00376,RC00523
Preferred nameMPI
Seed eggNOG ortholog2880.D7FIF5
Seed ortholog evalue1.9e-97
Seed ortholog score362.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1119.793.1prot_E-siliculosus-1a_F_contig1119.793.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1119 1404..3806 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927624.1007168-UTR-E-siliculosus-1a_F_contig1119:1157..14031622927624.1007168-UTR-E-siliculosus-1a_F_contig1119:1157..1403Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1119 1158..1403 +
1696318615.022128-UTR-E-siliculosus-1a_F_contig1119:1157..14031696318615.022128-UTR-E-siliculosus-1a_F_contig1119:1157..1403Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1119 1158..1403 +
1622927624.1695583-UTR-E-siliculosus-1a_F_contig1119:3806..47051622927624.1695583-UTR-E-siliculosus-1a_F_contig1119:3806..4705Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1119 3807..4705 +
1696318615.071704-UTR-E-siliculosus-1a_F_contig1119:3806..47051696318615.071704-UTR-E-siliculosus-1a_F_contig1119:3806..4705Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1119 3807..4705 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927624.1143138-CDS-E-siliculosus-1a_F_contig1119:1403..19341622927624.1143138-CDS-E-siliculosus-1a_F_contig1119:1403..1934Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 1404..1934 +
1696318615.0329666-CDS-E-siliculosus-1a_F_contig1119:1403..19341696318615.0329666-CDS-E-siliculosus-1a_F_contig1119:1403..1934Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 1404..1934 +
1622927624.1277428-CDS-E-siliculosus-1a_F_contig1119:2513..26691622927624.1277428-CDS-E-siliculosus-1a_F_contig1119:2513..2669Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 2514..2669 +
1696318615.0457911-CDS-E-siliculosus-1a_F_contig1119:2513..26691696318615.0457911-CDS-E-siliculosus-1a_F_contig1119:2513..2669Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 2514..2669 +
1622927624.1424341-CDS-E-siliculosus-1a_F_contig1119:3040..32261622927624.1424341-CDS-E-siliculosus-1a_F_contig1119:3040..3226Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 3041..3226 +
1696318615.0565562-CDS-E-siliculosus-1a_F_contig1119:3040..32261696318615.0565562-CDS-E-siliculosus-1a_F_contig1119:3040..3226Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 3041..3226 +
1622927624.1560223-CDS-E-siliculosus-1a_F_contig1119:3560..38061622927624.1560223-CDS-E-siliculosus-1a_F_contig1119:3560..3806Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 3561..3806 +
1696318615.0643084-CDS-E-siliculosus-1a_F_contig1119:3560..38061696318615.0643084-CDS-E-siliculosus-1a_F_contig1119:3560..3806Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1119 3561..3806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1119.793.1

>prot_E-siliculosus-1a_F_contig1119.793.1 ID=prot_E-siliculosus-1a_F_contig1119.793.1|Name=mRNA_E-siliculosus-1a_F_contig1119.793.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=373bp
MSIVHVRGDGDSENRKNEEMQMLHAADGASDGTADTADGVTDNEDIHTEE
DDVSQSHRHPRTDGHDRASNSGSSNNSSSSNISTVLISNSSSISSGCSND
NSGSSGHASANHGVHGVARISSTEKGHLASSVRHNTAAAAAVGGGIPPCA
FRRRGWSSSILAFADATGQRRAKEDLALRELILRLAEEYPGDIGIMMPLL
LNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVP
LLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYAT
PPAPVAALAIVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAG
EAALWVCLARSNINYHEGCEES*
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mRNA from alignment at E-siliculosus-1a_F_contig1119:1158..4705+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1119.793.1 ID=mRNA_E-siliculosus-1a_F_contig1119.793.1|Name=mRNA_E-siliculosus-1a_F_contig1119.793.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3548bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1119:1158..4705+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCGGCGGCAGCAGCAGCAGCAGCATCGACAACGACGACGATGGGCTGTC
AACTTGGCGAGGAAAGAGTGACTCTTTCGCTGACAGAGTCTCGAGCAGTA
ACCCCGCGAGGCATAGAAACTTCGGCGCTATTTGCGAGGACGGGGAGGAC
AGCGACATCGTGGCGGCAGAGATACGGCAAGAAGGGGTGTTGCGCGTGGC
GAGTGGTGGCCCAGACGGAGACCGCAGCGGCCTTGAGAAAGTGGAGATGA
GCATCGTGCACGTGAGGGGAGACGGAGACAGTGAGAACCGCAAGAACGAA
GAGATGCAGATGCTGCACGCGGCGGACGGTGCAAGCGACGGCACCGCGGA
CACCGCGGACGGGGTCACCGACAACGAAGATATTCACACCGAGGAGGACG
ATGTGAGCCAATCCCACCGTCACCCCCGCACCGACGGTCATGACCGAGCA
AGCAACTCGGGCTCGAGCAACAACAGCAGCAGCAGTAACATCAGCACCGT
ACTCATCAGCAACAGCAGCAGCATCAGCAGCGGCTGCAGCAACGACAACA
GCGGCAGCAGTGGCCACGCCAGTGCGAACCACGGCGTCCATGGCGTGGCG
AGGATTTCCTCCACCGAAAAAGGCCACCTAGCATCATCGGTGCGGCACAA
TACGGCGGCGGCGGCCGCGGTCGGGGGTGGGATCCCCCCCTGCGCGTTTC
GACGTCGCGGGTGGTCTTCGTCTATTCTCGCTTTTGCCGATGCCACCGGG
CAGCGGCGGGCGAAAGAGGACCTTGCGGTGAGAACAGTTCCATGTTTCTT
GACGAGCTGACACCCTTTTGACGCTCTCCATGTTCCTACTGCTGAAGCGT
CACAGTGACACTGCGATACCCCATGCATCCACCCGAGATTCACCACCGAA
AGGAAAACTAGGCCTGAAGCACACACCTCAAGAGGCGGTAGACTAGAACC
CCAGATGTTGGAGCCCTTTTGGAGTGCGGCATCTCTCTTGGCTATCCTGA
CCAGTCACTCTATTTTCATTCATGAATATACCCTCTGCGATAAAAACGGT
CCATGGCTATGGGAACTGTGAATACTGGGAAGCATGCAATACTGCACTAT
TTTCCCTTTTTGGTGGAAGCTTTCACGAGCTTCCATGGCCGCTCGTATGC
CTTCCATGGAAGCGACGAAAGCTGCCATGGGACCCCATGGAAGCTATGAA
AGCCGTGGGAGCGACCAAGGCTGCCATGGAAGCATCCATGTGGCCGAGAG
CAGAGCACACTCTCTTCTTGGGTGGGGACGTAGATGTCTACCGTCATAGG
TACCGTCATATGACCCAGGTAGCTTTGCGCCGGTGCGTGTTGCTTCTTGC
CTGCAGCTTCGCGAACTGATTCTGCGCCTAGCGGAAGAATATCCAGGGGA
CATCGGCATCATGATGCCGCTCCTCCTCAACTACCTGCGCATGGGGGAGG
GAGAGTCGTTCTTCATGGCGGCTAACGAGCCCCACGCCTACCTCAAGGGA
GACATCTTGGAGGTGTGTTTACGCTTGGGTACTTTCACAACTCCGTCGCT
GAGCCTCGCTCGACGCCATATTGCTTCGCTAGAACGAGGCGCGGAACGTT
GTAGTACCTACCCTTTATGCAGCCTTGACGATTTCGTTTCGATCTGTGTG
TTCGGGAGGGGAAGGCGGGGGAGTCTTGGTGGGGTTGGTAGATGATTTGA
TTTGTCCGTAGAGGCTCCGTGTGCTCGGCTTTGGGTCTACTTCGGCCACC
AAAACAGTCAGAGAATCACCGACGAAGAATGATGCTCACCAACAGTATAC
GGCACAGCAATGCATTTCTCTGTACGTGTTACTGTGCTCCACGTCCTCAA
CATTCCTCCATCAACTCTCATAAATTTCCACAGGTCATGGCCCGCTCGGA
CAACGTGGTTCGCGTGGCGCTTACCCCGAAGCACCGTGACGTGCCCCTGC
TGTGTCAGATCCTGACGTACAACATGGGCGCGCCTCCCATCGTCACGCCC
ATCCAGGTAGACCAGTTTTGCTCGAGATACACCCCCCCCATCAAGGACTT
CGAGATGCTGGATATACAGGTGCGTTGTTGAACGAAATCTAACGTACGGT
GTTCGGACGCACCATGTTGTTGGCAAGGTTCTTGCGACATTTGTCGGTAC
TGGCCATGTCTCGTCCATATACCACACGCTGAAGTCCAGGGGATGACGTC
ATCATTGCCACTGGTGCCAACGCTGTGTTTTATGAACAAGAGCAGGAAGA
AGAGACCAATACACCAATCGCCTGTCGAACTCAACCTCTTCGACCCGTGG
CAACAAGTGAAGTCATGACAGGTTCACATTCTAAACACCATATACACGGG
GCAGTGCAAAGGATTCAACGATATCAGTGCCCCGGGCGTGATCGTCTCCA
CAGGTGCCGCACGGTCAGGAGTACGCCACGCCGCCAGCGCCGGTGGCGGC
GCTAGCCATAGTCATGGCCGGTACCGGCTTCGCATGCGCCGGGAACGGGA
GGCAAAGGCTCTGCCGGGGGATGGCCTTCTTCGTGCCTGCTGAGACGACG
GTCGTGTACACCAACAGTTGCGTGGCTGGCGAAGCGGCGCTGTGGGTCTG
CCTGGCCAGGTCCAACATCAACTATCACGAGGGCTGCGAGGAAAGTTGAT
GGGGGTGGTATTTTGACGAGAATCGCATTGGGGTGGTGGTCGGCACCGGC
ATGCTAATTGTGATTTGTTGATTATTGGTTGTGTGAGTTGCGTTGACGTT
TTCAAGGGCTGGTGGTGTTGTGGATGATGGCACAAGTTAATTGTGTGGCC
CTTGAAGGACCGACACCCAGGAGCTGTCGGTGCCTGGCTCGAGACTACCC
CCTGGTTATCGTTGCAGTAAAGCACGAATGAATTGTCACATTTTTGTAAG
GCGGGTCTCTCGGACCTAGTGCATAGACTCGTGCTGTTGAGTATTGAAAG
TTTTTGATTGAGTGTGTGCAAACTGAGCGGTCGCGGTGTAATGAAAATAC
CGTGAACGACGTTGTTCTTTGTGTTTCTGCGTTGCATTTTAGATCGGTCA
ACGCAAGGTCAGAGATTTGGGTGTGCGAAGGAGTTTTTTCTTCGGTTCGT
GACACTTTGCAAGGCAAGAACTCCTCTTTCGGATCCGTTCTTCACCCCCT
GTAACCGTATAGACTATGTCTAGATATAGTGATTTCTTGATATCTTTGCG
AGCACGATCGAAATGAAGTGTCACCCGAGAGGATGGCGCGTTCGTCTCAG
GGGTCTGTCATGTTATTCTCGATCACATGTGGATATCGCCTTTGCGTTGT
GGGGTGTTCCGTCGTGCGTGTCGTGGTGCGTGTGTGGTGAAACGGAGCAT
CATGTAAGCTATGCACCACATTATTTGTGTGGAGAAAATCTACTATCAGT
GAGATCAGAGGAAGCTTTCCTGTTTTTTGTCCTAGCCCGCACTTGCGCGC
GGTTAGTCGGCCAAGCGCCCCCGGGTTTGCTCCCTCAGCCAGGCCTGTCT
CTCGTTGGTCGCTCTATCGCCTTGGTTCTCCTTTGTCTCACCTCAAGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1119:1158..4705+

>mRNA_E-siliculosus-1a_F_contig1119.793.1 ID=mRNA_E-siliculosus-1a_F_contig1119.793.1|Name=mRNA_E-siliculosus-1a_F_contig1119.793.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2238bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1119:1158..4705+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGCATCGTGCACGTGAGGGGAGACGGAGACAGTGAGAACCGCAAGAA
CGAAGAGATGCAGATGCTGCACGCGGCGGACGGTGCAAGCGACGGCACCG
CGGACACCGCGGACGGGGTCACCGACAACGAAGATATTCACACCGAGGAG
GACGATGTGAGCCAATCCCACCGTCACCCCCGCACCGACGGTCATGACCG
AGCAAGCAACTCGGGCTCGAGCAACAACAGCAGCAGCAGTAACATCAGCA
CCGTACTCATCAGCAACAGCAGCAGCATCAGCAGCGGCTGCAGCAACGAC
AACAGCGGCAGCAGTGGCCACGCCAGTGCGAACCACGGCGTCCATGGCGT
GGCGAGGATTTCCTCCACCGAAAAAGGCCACCTAGCATCATCGGTGCGGC
ACAATACGGCGGCGGCGGCCGCGGTCGGGGGTGGGATCCCCCCCTGCGCG
TTTCGACGTCGCGGGTGGTCTTCGTCTATTCTCGCTTTTGCCGATGCCAC
CGGGCAGCGGCGGGCGAAAGAGGACCTTGCGATGAGCATCGTGCACGTGA
GGGGAGACGGAGACAGTGAGAACCGCAAGAACGAAGAGATGCAGATGCTG
CACGCGGCGGACGGTGCAAGCGACGGCACCGCGGACACCGCGGACGGGGT
CACCGACAACGAAGATATTCACACCGAGGAGGACGATGTGAGCCAATCCC
ACCGTCACCCCCGCACCGACGGTCATGACCGAGCAAGCAACTCGGGCTCG
AGCAACAACAGCAGCAGCAGTAACATCAGCACCGTACTCATCAGCAACAG
CAGCAGCATCAGCAGCGGCTGCAGCAACGACAACAGCGGCAGCAGTGGCC
ACGCCAGTGCGAACCACGGCGTCCATGGCGTGGCGAGGATTTCCTCCACC
GAAAAAGGCCACCTAGCATCATCGGTGCGGCACAATACGGCGGCGGCGGC
CGCGGTCGGGGGTGGGATCCCCCCCTGCGCGTTTCGACGTCGCGGGTGGT
CTTCGTCTATTCTCGCTTTTGCCGATGCCACCGGGCAGCGGCGGGCGAAA
GAGGACCTTGCGCTTCGCGAACTGATTCTGCGCCTAGCGGAAGAATATCC
AGGGGACATCGGCATCATGATGCCGCTCCTCCTCAACTACCTGCGCATGG
GGGAGGGAGAGTCGTTCTTCATGGCGGCTAACGAGCCCCACGCCTACCTC
AAGGGAGACATCTTGGAGCTTCGCGAACTGATTCTGCGCCTAGCGGAAGA
ATATCCAGGGGACATCGGCATCATGATGCCGCTCCTCCTCAACTACCTGC
GCATGGGGGAGGGAGAGTCGTTCTTCATGGCGGCTAACGAGCCCCACGCC
TACCTCAAGGGAGACATCTTGGAGGTCATGGCCCGCTCGGACAACGTGGT
TCGCGTGGCGCTTACCCCGAAGCACCGTGACGTGCCCCTGCTGTGTCAGA
TCCTGACGTACAACATGGGCGCGCCTCCCATCGTCACGCCCATCCAGGTA
GACCAGTTTTGCTCGAGATACACCCCCCCCATCAAGGACTTCGAGATGCT
GGATATACAGGTCATGGCCCGCTCGGACAACGTGGTTCGCGTGGCGCTTA
CCCCGAAGCACCGTGACGTGCCCCTGCTGTGTCAGATCCTGACGTACAAC
ATGGGCGCGCCTCCCATCGTCACGCCCATCCAGGTAGACCAGTTTTGCTC
GAGATACACCCCCCCCATCAAGGACTTCGAGATGCTGGATATACAGGTGC
CGCACGGTCAGGAGTACGCCACGCCGCCAGCGCCGGTGGCGGCGCTAGCC
ATAGTCATGGCCGGTACCGGCTTCGCATGCGCCGGGAACGGGAGGCAAAG
GCTCTGCCGGGGGATGGCCTTCTTCGTGCCTGCTGAGACGACGGTCGTGT
ACACCAACAGTTGCGTGGCTGGCGAAGCGGCGCTGTGGGTCTGCCTGGCC
AGGTCCAACATCAACTATCACGAGGGCTGCGAGGAAAGTTGAGTGCCGCA
CGGTCAGGAGTACGCCACGCCGCCAGCGCCGGTGGCGGCGCTAGCCATAG
TCATGGCCGGTACCGGCTTCGCATGCGCCGGGAACGGGAGGCAAAGGCTC
TGCCGGGGGATGGCCTTCTTCGTGCCTGCTGAGACGACGGTCGTGTACAC
CAACAGTTGCGTGGCTGGCGAAGCGGCGCTGTGGGTCTGCCTGGCCAGGT
CCAACATCAACTATCACGAGGGCTGCGAGGAAAGTTGA
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