mRNA_E-siliculosus-1a_F_contig1118.790.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A6H5JWN1_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN1_9PHAE) HSP 1 Score: 286 bits (731), Expect = 1.510e-94 Identity = 141/155 (90.97%), Postives = 147/155 (94.84%), Query Frame = 3
Query: 87 MMDVKGIETETLEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKLGDDGSATPRLEPSPPDVSR 551
MMDVKGIETET E+KQSSIP AGQGLFAREHFTAGAVVCEYTGRQLRTVEALR+P+KSYLMRLGPQ VYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQE KALVVALKDI PGQEIFVDYGRWYWLSLKPT+LGDDG+AT LEPS P+VSR
Sbjct: 1 MMDVKGIETETFEIKQSSIPGAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRAPDKSYLMRLGPQ-VYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQECKALVVALKDIQPGQEIFVDYGRWYWLSLKPTELGDDGNATATLEPSSPNVSR 154
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: D7G0I6_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I6_ECTSI) HSP 1 Score: 185 bits (470), Expect = 7.340e-56 Identity = 91/97 (93.81%), Postives = 91/97 (93.81%), Query Frame = 3
Query: 267 MRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKLGDDGSATPRLEPSPPDVSR*H 557
MRLGPQ VYVDALDHPEVMARYINDCRNS LYNVAFRKLPQESKALVVALKDI PGQEIFVDYGRWYWLSLKPTKLGDDGSAT RLEP PPDVSR H
Sbjct: 1 MRLGPQ-VYVDALDHPEVMARYINDCRNSWLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTKLGDDGSATARLEPRPPDVSREH 96
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A814YM84_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814YM84_9BILA) HSP 1 Score: 143 bits (360), Expect = 7.230e-39 Identity = 73/125 (58.40%), Postives = 85/125 (68.00%), Query Frame = 3
Query: 120 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKL 494
LEVK S I AG GLF R G+ VC Y G+ LRT+EA+R +KSYLMRLGPQ VYVD D V+ RYIND RN L NV F K P+E A V+A +DI G+EIF DYGRWYWL+ PT+L
Sbjct: 4 LEVKPSQIEGAGSGLFTRTPIAKGSCVCIYRGKILRTIEAIRLKDKSYLMRLGPQ-VYVDPCDDKTVLGRYINDPRNRLLQNVVFDKRPEEQCAHVIAKRDIATGEEIFADYGRWYWLTKTPTRL 127
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A812NC81_9DINO (EHMT2 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812NC81_9DINO) HSP 1 Score: 144 bits (363), Expect = 7.940e-39 Identity = 68/130 (52.31%), Postives = 93/130 (71.54%), Query Frame = 3
Query: 111 TETLEVKQSSIPS-AGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKLG 497
++ LEV S + + AG GLF ++ G V+CEY GR T EA+R +KSYLMR+GPQ+ Y+DA + ++ARYINDCRN ++YNV+F K P E +ALVVA + I G+E+FVDYGRWYW L+P ++G
Sbjct: 15 SKALEVAPSQLGAEAGLGLFVQQAVEPGEVLCEYRGRTFATAEAMRLEDKSYLMRVGPQE-YIDAREDTSLVARYINDCRNPAVYNVSFEKRPGEGRALVVACRPISAGEELFVDYGRWYWAKLRPVRIG 143
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A816DKB5_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A816DKB5_9BILA) HSP 1 Score: 142 bits (357), Expect = 2.090e-38 Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 3
Query: 120 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKL 494
LEVK S I AG GLF R G+ VC Y+G+ LRTV+A+R +KSYLMRLGPQ VYVD D V+ RYIND RN L NV F K P+E A V+A +DI G+EIF DYGRWYWL+ P +L
Sbjct: 4 LEVKSSQIEGAGCGLFTRTPIAKGSCVCIYSGKVLRTVDAIRLKDKSYLMRLGPQ-VYVDPFDDKTVLGRYINDPRNRLLQNVIFDKRPEEQCAYVIAKRDIAAGEEIFADYGRWYWLTTTPNRL 127
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A485LJI3_9STRA (Aste57867_21405 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJI3_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.950e-38 Identity = 70/123 (56.91%), Postives = 86/123 (69.92%), Query Frame = 3
Query: 120 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPT 488
+E + S +P+AG GLFA + FT V+CEY G L T EAL +KSYLMRLG VYVDA D +VMARYINDCR+ ++NV F K P++ ALV AL DI PG+E+F DYGRWYWL+ T
Sbjct: 26 VEARTSQLPNAGAGLFATKAFTKNDVICEYRGEVLGTKEALHVGDKSYLMRLG-NGVYVDARDSLDVMARYINDCRSKGVHNVVFDKQPEQQVALVRALHDIEPGEELFADYGRWYWLAYNMT 147
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A7S2SN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN98_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.290e-38 Identity = 73/125 (58.40%), Postives = 89/125 (71.20%), Query Frame = 3
Query: 126 VKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKLGD 500
V+ S IP AG GLFA + F AG++VC YTG L T EA+R +K+YLMRLGPQ VYVDA ++ARYINDCRN N F K P + +ALVVAL+D+ PG+EIFVDYG+ YW + PTKL D
Sbjct: 1 VRPSGIPGAGSGLFAAKRFHAGSLVCVYTGEVLATREAIRLQDKAYLMRLGPQ-VYVDAAKDTTILARYINDCRNFRATNATFVKQPDQHRALVVALRDLSPGEEIFVDYGKRYWAAGAPTKLSD 124
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A813QZY1_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A813QZY1_ADIRI) HSP 1 Score: 139 bits (350), Expect = 2.230e-37 Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 3
Query: 120 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKL 494
LEVK S IP AG GL+ R + VC YTG+ LRT++A+R +K+YLMRLGPQ VYV+ D ++ RYIND RN L+NV F K P E A V+A +DI G+EIF DYGRWYWL PT+L
Sbjct: 4 LEVKPSQIPGAGSGLYTRNPIAKDSCVCVYTGQVLRTIDAIRLEDKTYLMRLGPQ-VYVNPHDDKSMLGRYINDPRNRLLHNVLFDKRPDEQCAYVIAKRDIACGEEIFADYGRWYWLGKTPTRL 127
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: A0A819EJ67_9BILA (Elongation of very long chain fatty acids protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A819EJ67_9BILA) HSP 1 Score: 146 bits (368), Expect = 5.280e-37 Identity = 73/125 (58.40%), Postives = 87/125 (69.60%), Query Frame = 3
Query: 120 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLSLKPTKL 494
LE+KQS IP AG GLF R + + VC YTG+ LRT++A+R +KSYLMRLGPQ VYVD D V+ARYIND RN L NV F K P E A ++A +DI G+EIF DYGRWYWL PT+L
Sbjct: 279 LEIKQSQIPGAGCGLFTRIPISKDSCVCIYTGKVLRTIDAIRREDKSYLMRLGPQ-VYVDPCDDTTVLARYINDPRNRLLQNVIFDKRPDEQCAYIIAKRDIAAGEEIFADYGRWYWLKKTPTRL 402
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Match: H3GV72_PHYRM (SET domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GV72_PHYRM) HSP 1 Score: 137 bits (344), Expect = 2.830e-36 Identity = 70/120 (58.33%), Postives = 90/120 (75.00%), Query Frame = 3
Query: 120 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPNKSYLMRLGPQQVYVDALDHPEVMARYINDCR-NSSLYNVAFRKLPQESKALVVALKDIHPGQEIFVDYGRWYWLS 476
+EV+ S+IP AG+GLFA G++VCEYTG L EA + P+KS+LM+LG + Y+DAL+ PEV+ARYINDCR + +NV F K PQE KALVVA++DI G+EIFVDYGR YWL+
Sbjct: 19 VEVRDSTIPGAGKGLFATRKHPQGSIVCEYTGVVLPNREAWKLPDKSFLMKLGDGK-YIDALNCPEVLARYINDCRGHRGGFNVHFDKRPQEDKALVVAMRDIRLGEEIFVDYGRLYWLA 137 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1118.790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1118.790.1 >prot_E-siliculosus-1a_F_contig1118.790.1 ID=prot_E-siliculosus-1a_F_contig1118.790.1|Name=mRNA_E-siliculosus-1a_F_contig1118.790.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=156bp MMDVKGIETETLEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEback to top mRNA from alignment at E-siliculosus-1a_F_contig1118:23656..26952+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1118.790.1 ID=mRNA_E-siliculosus-1a_F_contig1118.790.1|Name=mRNA_E-siliculosus-1a_F_contig1118.790.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3297bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1118:23656..26952+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1118:23656..26952+ >mRNA_E-siliculosus-1a_F_contig1118.790.1 ID=mRNA_E-siliculosus-1a_F_contig1118.790.1|Name=mRNA_E-siliculosus-1a_F_contig1118.790.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=936bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1118:23656..26952+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |