mRNA_E-siliculosus-1a_F_contig1115.771.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: D8LU36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU36_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 1.000e-148 Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 2
Query: 50 MPLNPHATPFVIKGSGGGAAADAGGKVRGKTSSSSPTPKIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAILPAEEETASGDQGKAKRQKKG 667
MPLNPHATPFVIKGSGGGAAADAG KVRGKTSSSSPTPKIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGR+LWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKH +CRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAILPAEEETASGDQG AKRQK G
Sbjct: 1 MPLNPHATPFVIKGSGGGAAADAGRKVRGKTSSSSPTPKIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRELWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHTHCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAILPAEEETASGDQGNAKRQKNG 206
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: A0A7S3XQ39_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ39_HETAK) HSP 1 Score: 195 bits (496), Expect = 7.570e-57 Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 2
Query: 167 IFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKL 595
IFCDLDG LVDF+ G Q + G+ P ++ PK MW LARA+ FY L WMPDG++LWD + +PTILTGLPMG WAE QKR WC RELG VPV TC+SRDK RPG +L+DDR SL+ W AGGVFIHH + + ++++L
Sbjct: 99 IFCDLDGVLVDFDSGVQQITGKMPSEMHPKTMWPQLARAEDFYNGLSWMPDGKELWDRIQSQRPTILTGLPMGRWAEAQKRAWCARELGAGVPVDTCLSRDKWRRARPGAVLVDDRFSLQEKWVEAGGVFIHHQSTSQTIDQL 241
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: H9UJ11_SPIAZ (Uncharacterized protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) TaxID=889378 RepID=H9UJ11_SPIAZ) HSP 1 Score: 189 bits (479), Expect = 8.640e-56 Identity = 83/154 (53.90%), Postives = 101/154 (65.58%), Query Frame = 2
Query: 167 IFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGN------ILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAILP 610
+F DLDG L DF++ + G P +L P +W LA+ GFY L W PDG DLW+ L PTILTGLP G+WAEPQKR WC RELG VPVITCMSRDKH+ IL+DDR+ L AW+ AGGVFIHHT+A +S+E+L + P
Sbjct: 6 LFLDLDGVLADFDRAVVELFGTPPHELHPARLWSRLAKTPGFYASLHWTPDGADLWEFARRLSPTILTGLPRGSWAEPQKREWCARELGSTVPVITCMSRDKHLQAEQARQVGMTAILVDDRQRLAEAWEAAGGVFIHHTSAAASIEQLSGLYP 159
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: V5WIQ5_9SPIO (Uncharacterized protein n=2 Tax=Salinispira pacifica TaxID=1307761 RepID=V5WIQ5_9SPIO) HSP 1 Score: 186 bits (471), Expect = 1.090e-54 Identity = 85/148 (57.43%), Postives = 102/148 (68.92%), Query Frame = 2
Query: 167 IFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGN-----ILIDDRESLKAAWQRAGGVFIHHTAATSSLEKL 595
+F DLDG LVDF++G + V G+ P +L P+ MW LA++ FY L WMPDGR LWD + H+ P ILTGLPMGNWAE QKR+WC RELGE V VITCMSR+K R +LIDDR LK AW+ GG+FIHHT A SL +L
Sbjct: 2 LFVDLDGVLVDFDRGVKEVTGKLPHELSPREMWPRLAKSGDFYNRLHWMPDGRQLWDELKHMNPVILTGLPMGNWAEAQKRSWCARELGEDVEVITCMSREKAKKARERAGTRIPVLIDDRLRLKEAWEEMGGIFIHHTDAVKSLRQL 149
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: A0A2M8AHI9_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium CG_4_9_14_3_um_filter_33_16 TaxID=1973993 RepID=A0A2M8AHI9_9FLAO) HSP 1 Score: 184 bits (466), Expect = 5.390e-54 Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 2
Query: 164 KIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAIL 607
++F DLDG L DFEK + G+ P ++ K MWG LA FY LDWMPDGRDLWDGV HL P ILTG+PMG WA QKR+WC R LG + VITC +++K Y +PG+ILIDD + AW+ GG+ IHH A SSL KLK +
Sbjct: 2 QVFVDLDGVLCDFEKRVHEIFGKKPKEIPLKVMWGKLASIDNFYSELDWMPDGRDLWDGVKHLNPIILTGIPMGGWAPHQKRSWCYRNLGCDISVITCFAKEKQNYGKPGDILIDDTKRNIDAWKSIGGIAIHHVTAKSSLAKLKEYI 149
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: E0RU76_SPITD (Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) TaxID=665571 RepID=E0RU76_SPITD) HSP 1 Score: 179 bits (454), Expect = 5.640e-52 Identity = 81/154 (52.60%), Postives = 103/154 (66.88%), Query Frame = 2
Query: 164 KIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYC----RPGNI--LIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAIL 607
+IF DLDG LVDFEKG G+ D+ P MW LAR FY LDW+PDGR LW+ + +PTILTGLP+G WA PQKR WC+ LG VPV+TC+SR K RPG + LIDDRESL+ +W+ GG+FIHHT+A +++ L ++L
Sbjct: 4 RIFVDLDGVLVDFEKGVLEATGKRVDEQSPSEMWAVLARTPEFYARLDWLPDGRKLWEFLRPFKPTILTGLPLGRWAAPQKRTWCRIHLGPEVPVLTCLSRHKAATALEVLRPGEVPLLIDDRESLRPSWEEIGGIFIHHTSADATISSLTSLL 157
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: A0A512DPL7_9PROT (Uncharacterized protein n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DPL7_9PROT) HSP 1 Score: 177 bits (450), Expect = 1.390e-51 Identity = 77/147 (52.38%), Postives = 104/147 (70.75%), Query Frame = 2
Query: 164 KIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAI 604
K+F DLDG L DF++G +AV G+ PD+L + MW LA+A+ FY L+ M D + LW+ +PTILTGLPMG+WA QKR W LG HVPV+TCM+RDKH Y PG++L+DDR + AW++AGG+FI HT A S+++LK +
Sbjct: 2 KLFLDLDGVLADFDRGVEAVTGKRPDQLPVRRMWQALAKAQDFYGTLEMMHDAQVLWEFCEPHEPTILTGLPMGDWAPDQKRRWVAAMLGAHVPVVTCMTRDKHRYAGPGHVLVDDRAVTREAWEKAGGIFILHTQAVRSIDELKRL 148
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: A0A098QU60_9SPIO (Uncharacterized protein n=1 Tax=Spirochaeta lutea TaxID=1480694 RepID=A0A098QU60_9SPIO) HSP 1 Score: 177 bits (450), Expect = 2.100e-51 Identity = 82/157 (52.23%), Postives = 102/157 (64.97%), Query Frame = 2
Query: 164 KIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRP------GNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAILPAE 616
++F DLDG L DF+ G +AV G P+ L P MWG +A+ FY LDWMPDG+ LW+ + L P ILTGLP G+WAEPQKR WCKR LG + VITCMSR+K R +L+DDRE L+ AW+ AGG+FIHH A SL+ L+ L E
Sbjct: 5 QLFLDLDGVLADFDGGVKAVTGRLPEALPPGVMWGKIAKTPDFYNTLDWMPDGQLLWEHLHALNPIILTGLPRGSWAEPQKRAWCKRMLGPDIEVITCMSREKATIARERVGHDRDMVLVDDRERLRGAWEDAGGIFIHHRNARESLQALQPYLVGE 161
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: A0A7S4GJQ1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJQ1_9EUGL) HSP 1 Score: 179 bits (453), Expect = 4.410e-51 Identity = 85/185 (45.95%), Postives = 109/185 (58.92%), Query Frame = 2
Query: 164 KIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGL-----ARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAI-------------LPAEEETASGDQGKAKRQKK 664
++FCDLDG L DF+K Q G+ PD+L P MW L R GF++ L+W DG+ LW + HL P ILTGLP G WA PQKR WC RELG VITC + K YCR G++LIDD L+ AW++AGG+FIHHT +L KL+A+ PA E + G G +R++K
Sbjct: 33 QLFCDLDGVLCDFDKKVQEACGKPPDQLHPIDMWRALEGVDGGRPTGFFDQLEWTEDGQRLWTAIRHLHPVILTGLPQGTWAAPQKRKWCARELGCATKVITCKALQKCKYCRTGSLLIDDNLDLQQAWEKAGGIFIHHTTTARTLRKLQALRVLGHSNGTTALHAPAGEGSVPGADGSQQRRRK 217
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Match: A0A660SVB8_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A660SVB8_9SPIR) HSP 1 Score: 175 bits (444), Expect = 2.070e-50 Identity = 83/157 (52.87%), Postives = 99/157 (63.06%), Query Frame = 2
Query: 164 KIFCDLDGCLVDFEKGCQAVMGETPDKLRPKAMWGGLARAKGFYEHLDWMPDGRDLWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHIYC--------RPGN--ILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAI 604
++F DLDG LVDFE G + G+ P +L P+ MW +A KGFY+ L WMPDGRDLW+ V P ILTGLPMG WAEPQKR WC+RELG +PVIT MSR K P ILIDDR +K W+ AGG+FI H A S+E LK +
Sbjct: 10 QLFVDLDGVLVDFETGVRRATGKEPSELHPRRMWPAIAGTKGFYDRLGWMPDGRDLWEAVKGYSPVILTGLPMGKWAEPQKRTWCERELGPEIPVITGMSRRKAELALSWLEENGMPDKTPILIDDRLKIKEPWEAAGGIFILHLHAAGSIEALKGL 166 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1115.771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1115.771.1 >prot_E-siliculosus-1a_F_contig1115.771.1 ID=prot_E-siliculosus-1a_F_contig1115.771.1|Name=mRNA_E-siliculosus-1a_F_contig1115.771.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=221bp MRLWVRAIPFARVSMPLNPHATPFVIKGSGGGAAADAGGKVRGKTSSSSPback to top mRNA from alignment at E-siliculosus-1a_F_contig1115:3243..5607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1115.771.1 ID=mRNA_E-siliculosus-1a_F_contig1115.771.1|Name=mRNA_E-siliculosus-1a_F_contig1115.771.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2365bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1115:3243..5607- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1115:3243..5607- >mRNA_E-siliculosus-1a_F_contig1115.771.1 ID=mRNA_E-siliculosus-1a_F_contig1115.771.1|Name=mRNA_E-siliculosus-1a_F_contig1115.771.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1326bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1115:3243..5607- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |