mRNA_E-siliculosus-1a_F_contig11130.767.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA) HSP 1 Score: 789 bits (2037), Expect = 2.510e-287 Identity = 393/399 (98.50%), Postives = 393/399 (98.50%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 1197
N TGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMT CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED
Sbjct: 50 NTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 448
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA) HSP 1 Score: 752 bits (1942), Expect = 7.470e-273 Identity = 365/399 (91.48%), Postives = 385/399 (96.49%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 1197
N TGAGKHVPR + VDLEPTV DE+RTG+YR L+HPEQ+ISGKEDAANNYARGHYT+GKEIVDLVLDRIRKLADNCTGLQGF++FHATGGGTGSG GSLLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+HALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRL+AQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSV EITNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED
Sbjct: 50 NTFFTETGAGKHVPRCLMVDLEPTVVDEIRTGSYRHLFHPEQLISGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADNCTGLQGFMIFHATGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVVSSLTASLRFDGALNVDLSEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 448
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S2A4A3_9STRA (Tubulin alpha chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4A3_9STRA) HSP 1 Score: 746 bits (1927), Expect = 2.770e-271 Identity = 364/386 (94.30%), Postives = 378/386 (97.93%), Query Frame = 1
Query: 19 TGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAE 1176
TG GKHVPRAVYVDLEPTVCDEVR G YRQLYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+P+V+TAVVEPYN VLSTHALLEHTDCTFCLDNEALYDVCR+NLDI+RPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS+EKA+HEQLSVAEIT SVFEP GMMT+CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCMVANTTA+AEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVGAE AE
Sbjct: 13 TGNGKHVPRAVYVDLEPTVCDEVRAGAYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDDVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPEVSTAVVEPYNYVLSTHALLEHTDCTFCLDNEALYDVCRKNLDIDRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSEKAFHEQLSVAEITASVFEPGGMMTRCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMVANTTAVAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGAEAAE 398
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S1GLI0_CYCTE (Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GLI0_CYCTE) HSP 1 Score: 739 bits (1908), Expect = 3.840e-267 Identity = 364/396 (91.92%), Postives = 377/396 (95.20%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGE 1188
N TG+GKHVPRAVYVDLEPTVCDEVR G+YRQLYHPEQII+GKEDAANNYARGHYT GKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNL IERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS KA+HEQLSVAEITNSVFEP MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT+KTKRTIQFVDWCPTGFKCGINYQ PT VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMY KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+T + GE
Sbjct: 85 NTFFSETGSGKHVPRAVYVDLEPTVCDEVRHGSYRQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISQAKAHHEQLSVAEITNSVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQAPTPVPGGDLATVKRAVCMVANTTAIAEALSRIDHKFDLMYMKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAQTNDEGGE 480
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A1E7FDT8_9STRA (Tubulin alpha chain n=4 Tax=Sar TaxID=2698737 RepID=A0A1E7FDT8_9STRA) HSP 1 Score: 732 bits (1890), Expect = 5.570e-265 Identity = 357/394 (90.61%), Postives = 377/394 (95.69%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 1182
N T +GKHVPRAV+VDLEPTVCDEVRTG Y +LYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRR+LDI++PTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAP+ISA+KA+HE LSVAEIT++VFEP MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY+PP VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA++ E E
Sbjct: 51 NTFFSETSSGKHVPRAVFVDLEPTVCDEVRTGKYSKLYHPEQIISGKEDAANNYARGHYTIGKEIVDQVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRHLDIQKPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVISADKAFHESLSVAEITSTVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYEPPKNVPGGDLAEVKRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSGEPE 444
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A455ZC01_9STRA (Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 RepID=A0A455ZC01_9STRA) HSP 1 Score: 729 bits (1883), Expect = 6.990e-264 Identity = 356/398 (89.45%), Postives = 376/398 (94.47%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
N TGAGKHVPR+V VDLEPTVCDEVRTGTYR LYHPEQII+GKEDAANNYARGHYTIGKEIVDLVLDRIRK ADNCTGLQGFL F+A GGGTGSGLGSLLLERLSVDYGRKSKL F + P+PQV+TAVVEPYN VLSTH+LLEHTD LDNEA+YD+CRR+LDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TN+ FEPA MM+KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE
Sbjct: 50 NTFFSETGAGKHVPRSVMVDLEPTVCDEVRTGTYRALYHPEQIITGKEDAANNYARGHYTIGKEIVDLVLDRIRKTADNCTGLQGFLCFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFCVYPSPQVSTAVVEPYNCVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNAAFEPASMMSKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRVDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 447
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A1Y1I1D7_KLENI (Tubulin alpha chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1D7_KLENI) HSP 1 Score: 727 bits (1876), Expect = 2.130e-263 Identity = 353/398 (88.69%), Postives = 379/398 (95.23%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
N TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNSV+EP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+AN+T++AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE
Sbjct: 15 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSVYEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE 412
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A061SEY1_9CHLO (Tubulin alpha chain (Fragment) n=4 Tax=Viridiplantae TaxID=33090 RepID=A0A061SEY1_9CHLO) HSP 1 Score: 728 bits (1878), Expect = 4.350e-263 Identity = 354/398 (88.94%), Postives = 378/398 (94.97%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
N TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKL+DNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR+LDIERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS FEPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE
Sbjct: 53 NTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE 450
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S4SRH8_9STRA (Tubulin alpha chain (Fragment) n=26 Tax=Eukaryota TaxID=2759 RepID=A0A7S4SRH8_9STRA) HSP 1 Score: 724 bits (1870), Expect = 8.980e-262 Identity = 354/398 (88.94%), Postives = 375/398 (94.22%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
N TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF++ GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR LDIERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAPIISAEKAYHEQLSVAEITNS FEPA MM KCDPRHGKYMACC+MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM++N+TAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG ETAEGEGEEE
Sbjct: 45 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGEGEEE 442
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: C1EGH4_MICCC (Tubulin alpha chain n=3 Tax=Mamiellaceae TaxID=41873 RepID=C1EGH4_MICCC) HSP 1 Score: 723 bits (1866), Expect = 2.430e-261 Identity = 351/398 (88.19%), Postives = 377/398 (94.72%), Query Frame = 1
Query: 1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
N TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGF+VF+A GGGTGSGLGSLLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR+LDIERPTYTNLNRLV QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS +EPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEG+GE+E
Sbjct: 50 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVGQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAYEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDGEDE 447 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11130.767.1 >prot_E-siliculosus-1a_F_contig11130.767.1 ID=prot_E-siliculosus-1a_F_contig11130.767.1|Name=mRNA_E-siliculosus-1a_F_contig11130.767.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=399bp NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAback to top mRNA from alignment at E-siliculosus-1a_F_contig11130:3..2058- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11130.767.1 ID=mRNA_E-siliculosus-1a_F_contig11130.767.1|Name=mRNA_E-siliculosus-1a_F_contig11130.767.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2056bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11130:3..2058- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11130:3..2058- >mRNA_E-siliculosus-1a_F_contig11130.767.1 ID=mRNA_E-siliculosus-1a_F_contig11130.767.1|Name=mRNA_E-siliculosus-1a_F_contig11130.767.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2394bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11130:3..2058- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |