mRNA_E-siliculosus-1a_F_contig11130.767.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig11130.767.1
Unique NamemRNA_E-siliculosus-1a_F_contig11130.767.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 789 bits (2037), Expect = 2.510e-287
Identity = 393/399 (98.50%), Postives = 393/399 (98.50%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 1197
            N     TGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMT CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED
Sbjct:   50 NTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 448          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA)

HSP 1 Score: 752 bits (1942), Expect = 7.470e-273
Identity = 365/399 (91.48%), Postives = 385/399 (96.49%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 1197
            N     TGAGKHVPR + VDLEPTV DE+RTG+YR L+HPEQ+ISGKEDAANNYARGHYT+GKEIVDLVLDRIRKLADNCTGLQGF++FHATGGGTGSG GSLLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+HALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRL+AQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSV EITNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED
Sbjct:   50 NTFFTETGAGKHVPRCLMVDLEPTVVDEIRTGSYRHLFHPEQLISGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADNCTGLQGFMIFHATGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVVSSLTASLRFDGALNVDLSEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED 448          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S2A4A3_9STRA (Tubulin alpha chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4A3_9STRA)

HSP 1 Score: 746 bits (1927), Expect = 2.770e-271
Identity = 364/386 (94.30%), Postives = 378/386 (97.93%), Query Frame = 1
Query:   19 TGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAE 1176
            TG GKHVPRAVYVDLEPTVCDEVR G YRQLYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+P+V+TAVVEPYN VLSTHALLEHTDCTFCLDNEALYDVCR+NLDI+RPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS+EKA+HEQLSVAEIT SVFEP GMMT+CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCMVANTTA+AEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVGAE AE
Sbjct:   13 TGNGKHVPRAVYVDLEPTVCDEVRAGAYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDDVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPEVSTAVVEPYNYVLSTHALLEHTDCTFCLDNEALYDVCRKNLDIDRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSEKAFHEQLSVAEITASVFEPGGMMTRCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMVANTTAVAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGAEAAE 398          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S1GLI0_CYCTE (Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GLI0_CYCTE)

HSP 1 Score: 739 bits (1908), Expect = 3.840e-267
Identity = 364/396 (91.92%), Postives = 377/396 (95.20%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGE 1188
            N     TG+GKHVPRAVYVDLEPTVCDEVR G+YRQLYHPEQII+GKEDAANNYARGHYT GKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNL IERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS  KA+HEQLSVAEITNSVFEP  MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT+KTKRTIQFVDWCPTGFKCGINYQ PT VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMY KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+T +  GE
Sbjct:   85 NTFFSETGSGKHVPRAVYVDLEPTVCDEVRHGSYRQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISQAKAHHEQLSVAEITNSVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQAPTPVPGGDLATVKRAVCMVANTTAIAEALSRIDHKFDLMYMKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAQTNDEGGE 480          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A1E7FDT8_9STRA (Tubulin alpha chain n=4 Tax=Sar TaxID=2698737 RepID=A0A1E7FDT8_9STRA)

HSP 1 Score: 732 bits (1890), Expect = 5.570e-265
Identity = 357/394 (90.61%), Postives = 377/394 (95.69%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 1182
            N     T +GKHVPRAV+VDLEPTVCDEVRTG Y +LYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRR+LDI++PTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAP+ISA+KA+HE LSVAEIT++VFEP  MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY+PP  VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA++ E E
Sbjct:   51 NTFFSETSSGKHVPRAVFVDLEPTVCDEVRTGKYSKLYHPEQIISGKEDAANNYARGHYTIGKEIVDQVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRHLDIQKPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVISADKAFHESLSVAEITSTVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYEPPKNVPGGDLAEVKRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSGEPE 444          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A455ZC01_9STRA (Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 RepID=A0A455ZC01_9STRA)

HSP 1 Score: 729 bits (1883), Expect = 6.990e-264
Identity = 356/398 (89.45%), Postives = 376/398 (94.47%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
            N     TGAGKHVPR+V VDLEPTVCDEVRTGTYR LYHPEQII+GKEDAANNYARGHYTIGKEIVDLVLDRIRK ADNCTGLQGFL F+A GGGTGSGLGSLLLERLSVDYGRKSKL F + P+PQV+TAVVEPYN VLSTH+LLEHTD    LDNEA+YD+CRR+LDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TN+ FEPA MM+KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE
Sbjct:   50 NTFFSETGAGKHVPRSVMVDLEPTVCDEVRTGTYRALYHPEQIITGKEDAANNYARGHYTIGKEIVDLVLDRIRKTADNCTGLQGFLCFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFCVYPSPQVSTAVVEPYNCVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNAAFEPASMMSKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRVDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 447          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A1Y1I1D7_KLENI (Tubulin alpha chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1D7_KLENI)

HSP 1 Score: 727 bits (1876), Expect = 2.130e-263
Identity = 353/398 (88.69%), Postives = 379/398 (95.23%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
            N     TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNSV+EP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+AN+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE
Sbjct:   15 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSVYEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE 412          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A061SEY1_9CHLO (Tubulin alpha chain (Fragment) n=4 Tax=Viridiplantae TaxID=33090 RepID=A0A061SEY1_9CHLO)

HSP 1 Score: 728 bits (1878), Expect = 4.350e-263
Identity = 354/398 (88.94%), Postives = 378/398 (94.97%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
            N     TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKL+DNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDIERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS FEPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE
Sbjct:   53 NTFFSETGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE 450          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: A0A7S4SRH8_9STRA (Tubulin alpha chain (Fragment) n=26 Tax=Eukaryota TaxID=2759 RepID=A0A7S4SRH8_9STRA)

HSP 1 Score: 724 bits (1870), Expect = 8.980e-262
Identity = 354/398 (88.94%), Postives = 375/398 (94.22%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
            N     TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF++ GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR LDIERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAPIISAEKAYHEQLSVAEITNS FEPA MM KCDPRHGKYMACC+MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM++N+TAIAE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG ETAEGEGEEE
Sbjct:   45 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGEGEEE 442          
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Match: C1EGH4_MICCC (Tubulin alpha chain n=3 Tax=Mamiellaceae TaxID=41873 RepID=C1EGH4_MICCC)

HSP 1 Score: 723 bits (1866), Expect = 2.430e-261
Identity = 351/398 (88.19%), Postives = 377/398 (94.72%), Query Frame = 1
Query:    1 NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE 1194
            N     TGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGF+VF+A GGGTGSGLGSLLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDIERPTYTNLNRLV QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEITNS +EPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEG+GE+E
Sbjct:   50 NTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVGQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAYEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDGEDE 447          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11130.767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TBA2_PELFA2.510e-28798.50Tubulin alpha-2 chain n=45 Tax=cellular organisms ... [more]
A0A7S0Q113_9EUKA7.470e-27391.48Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 ... [more]
A0A7S2A4A3_9STRA2.770e-27194.30Tubulin alpha chain n=1 Tax=Ditylum brightwellii T... [more]
A0A7S1GLI0_CYCTE3.840e-26791.92Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=... [more]
A0A1E7FDT8_9STRA5.570e-26590.61Tubulin alpha chain n=4 Tax=Sar TaxID=2698737 RepI... [more]
A0A455ZC01_9STRA6.990e-26489.45Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 R... [more]
A0A1Y1I1D7_KLENI2.130e-26388.69Tubulin alpha chain n=1 Tax=Klebsormidium nitens T... [more]
A0A061SEY1_9CHLO4.350e-26388.94Tubulin alpha chain (Fragment) n=4 Tax=Viridiplant... [more]
A0A7S4SRH8_9STRA8.980e-26288.94Tubulin alpha chain (Fragment) n=26 Tax=Eukaryota ... [more]
C1EGH4_MICCC2.430e-26188.19Tubulin alpha chain n=3 Tax=Mamiellaceae TaxID=418... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11130contigE-siliculosus-1a_F_contig11130:3..2058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1197
Model size1197
Exons2
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03019,ko03036,ko04147,ko04812
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.Z
EggNOG OGsCOG5023@1,KOG1376@2759
EggNOG free text desc.structural constituent of cytoskeleton
KEGG Pathwayko04145,ko04210,ko04530,ko04540,ko05130,map04145,map04210,map04530,map04540,map05130
KEGG koko:K07374
Seed eggNOG ortholog2880.D7G923
Seed ortholog evalue7.8e-227
Seed ortholog score792.7
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927619.2316742-CDS-E-siliculosus-1a_F_contig11130:2..1881622927619.2316742-CDS-E-siliculosus-1a_F_contig11130:2..188Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11130 3..188 -
1696318612.7767112-CDS-E-siliculosus-1a_F_contig11130:2..1881696318612.7767112-CDS-E-siliculosus-1a_F_contig11130:2..188Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11130 3..188 -
1622927619.2485154-CDS-E-siliculosus-1a_F_contig11130:1047..20581622927619.2485154-CDS-E-siliculosus-1a_F_contig11130:1047..2058Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11130 1048..2058 -
1696318612.788145-CDS-E-siliculosus-1a_F_contig11130:1047..20581696318612.788145-CDS-E-siliculosus-1a_F_contig11130:1047..2058Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11130 1048..2058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11130.767.1prot_E-siliculosus-1a_F_contig11130.767.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig11130 3..2058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig11130.767.1

>prot_E-siliculosus-1a_F_contig11130.767.1 ID=prot_E-siliculosus-1a_F_contig11130.767.1|Name=mRNA_E-siliculosus-1a_F_contig11130.767.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=399bp
NATTKRTGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDA
ANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGL
GSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTD
CTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALN
VDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPA
GMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT
GFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMY
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED
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mRNA from alignment at E-siliculosus-1a_F_contig11130:3..2058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig11130.767.1 ID=mRNA_E-siliculosus-1a_F_contig11130.767.1|Name=mRNA_E-siliculosus-1a_F_contig11130.767.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2056bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11130:3..2058- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AATGCGACGACCAAACGAACAGGTGCGGGCAAGCACGTGCCCCGCGCGGT GTACGTGGACCTGGAGCCCACCGTGTGCGACGAAGTCCGCACCGGCACCT ACCGCCAGCTGTACCACCCGGAGCAGATCATCTCGGGCAAGGAGGACGCG GCCAACAACTACGCCCGCGGCCACTACACGATCGGCAAGGAGATCGTGGA CCTGGTGCTCGACCGCATCCGCAAGCTGGCGGACAACTGCACCGGCCTCC AGGGCTTCCTGGTGTTCCACGCCACCGGCGGCGGGACCGGGTCCGGGCTC GGCTCGCTCCTGCTGGAGCGTCTGTCGGTGGACTACGGCCGCAAGTCCAA GCTTTCCTTCGCCATCACCCCGGCGCCGCAGGTGGCGACGGCGGTGGTGG AGCCGTACAACTCGGTGCTGTCCACGCACGCCCTCCTGGAGCACACGGAC TGCACCTTCTGCCTCGACAACGAGGCGCTGTACGACGTATGCCGCCGCAA CCTCGACATCGAGCGGCCGACGTACACGAACCTGAACCGTCTCGTGGCCC AGGTTATCTCGTCCCTGACGGCCTCGCTCCGGTTCGACGGCGCCCTTAAC GTGGACGTGACCGAGTTCCAGACCAACCTGGTGCCCTACCCCCGCATCCA CTTCATGCTCACGTCGTACGCGCCCATCATCTCGGCGGAGAAGGCCTACC ACGAGCAGCTGTCGGTGGCGGAGATCACCAACTCGGTGTTCGAGCCGGCC GGCATGATGACCAAGTGCGACCCCCGCCACGGCAAGTACATGGCGTGCTG CCTCATGTACCGCGGAGACGTGGTGCCCAAGGACGTGAACGCTGCGGTGG CCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCCACC GGCTTCAAGTGCGGCATCAACTACCAGCCCCCGACCGTCGTGCCCGGTGG CGACCTCGCCCGCGTGCAGCGCGCCGTGTGCATGGTGGCCAACACCACCG CCATCGCTGAGGTGCGTCTCTTTTTTATCTCTCGTGTGTGCGTTATTTTT TCTCTTTTGTGTGTGGTTATGTTTCTGAGGGTACGTCCAAGTACGTTCGT TCCCCGGACGATTGCGCTCGATTTTTTCTACCTACTGCCAGAAATAGAGA CGTGGTTGTGGGAAACGCTCATTGTAGAATGGAACTTTCCAGCGCTCTCC ATGCGCATGCGCTGGGGAAGCTGGGAGTAATTTTTGCTTGAAGTGCCAGC CATGAACGCATGCATCACGTCGTGCAGCCCGCCTTGTCAGAATAGTGCTT CGAAGTACCATTCACGGGCAAATGACACCACACGGGCACGACAGTCATCC ATTGCGATGAAAAGATCAACTCAGCACCAATCAAGGATCGATCCATATCT TACGCAGACAATGTGGTGTGTCGTGTTGACCAGTTCATATCGCAGCAGGA AACACCGTTGCAAAGATCGCACAATCTTGACAGCGATGTTCCTGCCTGCC TTTCGCGGTGACGTGGCCAACACATAACAAAATCGTCTGCGTGAAATAGC GCTACCGGTCCATCGTTGCTGCGTGCTGAGTTGATCTTTCGTCGCCATCG ATGGGTGTCTAGGCGTTTGCCATCGACTGATGGATGGAGGGATGTAGAGA AGAGAGGAAGAAGTTCAGCATCTCCTGGGCGGTGCCACCACTCTCTGATA TGAGACAAACCTAAACCTATGCTATGTTTGGCCCGAGCATCCACGGCAAG TGTTGTCATTGATCGTGGAAATATTTCTGTTGCGGGATTTCTCACGTACC TGCTTTGTCTGACGACTTTTTCCCTTCGACCGCTGTGCCACCTCCACCAT ACCATGCAACCGAACCGCAGGCTCTGTCTCGCATCGACCACAAGTTCGAC CTCATGTACGCCAAGCGTGCGTTCGTGCACTGGTACGTGGGTGAGGGCAT GGAGGAGGGAGAGTTCTCCGAGGCCCGTGAGGACCTGGCTGCCCTCGAGA AGGACTACGAAGAGGTCGGCGCCGAGACCGCCGAGGGCGAGGGCGAGGAG GAGGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11130:3..2058-

>mRNA_E-siliculosus-1a_F_contig11130.767.1 ID=mRNA_E-siliculosus-1a_F_contig11130.767.1|Name=mRNA_E-siliculosus-1a_F_contig11130.767.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2394bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11130:3..2058- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AATGCGACGACCAAACGAACAGGTGCGGGCAAGCACGTGCCCCGCGCGGT
GTACGTGGACCTGGAGCCCACCGTGTGCGACGAAGTCCGCACCGGCACCT
ACCGCCAGCTGTACCACCCGGAGCAGATCATCTCGGGCAAGGAGGACGCG
GCCAACAACTACGCCCGCGGCCACTACACGATCGGCAAGGAGATCGTGGA
CCTGGTGCTCGACCGCATCCGCAAGCTGGCGGACAACTGCACCGGCCTCC
AGGGCTTCCTGGTGTTCCACGCCACCGGCGGCGGGACCGGGTCCGGGCTC
GGCTCGCTCCTGCTGGAGCGTCTGTCGGTGGACTACGGCCGCAAGTCCAA
GCTTTCCTTCGCCATCACCCCGGCGCCGCAGGTGGCGACGGCGGTGGTGG
AGCCGTACAACTCGGTGCTGTCCACGCACGCCCTCCTGGAGCACACGGAC
TGCACCTTCTGCCTCGACAACGAGGCGCTGTACGACGTATGCCGCCGCAA
CCTCGACATCGAGCGGCCGACGTACACGAACCTGAACCGTCTCGTGGCCC
AGGTTATCTCGTCCCTGACGGCCTCGCTCCGGTTCGACGGCGCCCTTAAC
GTGGACGTGACCGAGTTCCAGACCAACCTGGTGCCCTACCCCCGCATCCA
CTTCATGCTCACGTCGTACGCGCCCATCATCTCGGCGGAGAAGGCCTACC
ACGAGCAGCTGTCGGTGGCGGAGATCACCAACTCGGTGTTCGAGCCGGCC
GGCATGATGACCAAGTGCGACCCCCGCCACGGCAAGTACATGGCGTGCTG
CCTCATGTACCGCGGAGACGTGGTGCCCAAGGACGTGAACGCTGCGGTGG
CCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCCACC
GGCTTCAAGTGCGGCATCAACTACCAGCCCCCGACCGTCGTGCCCGGTGG
CGACCTCGCCCGCGTGCAGCGCGCCGTGTGCATGGTGGCCAACACCACCG
CCATCGCTGAGAATGCGACGACCAAACGAACAGGTGCGGGCAAGCACGTG
CCCCGCGCGGTGTACGTGGACCTGGAGCCCACCGTGTGCGACGAAGTCCG
CACCGGCACCTACCGCCAGCTGTACCACCCGGAGCAGATCATCTCGGGCA
AGGAGGACGCGGCCAACAACTACGCCCGCGGCCACTACACGATCGGCAAG
GAGATCGTGGACCTGGTGCTCGACCGCATCCGCAAGCTGGCGGACAACTG
CACCGGCCTCCAGGGCTTCCTGGTGTTCCACGCCACCGGCGGCGGGACCG
GGTCCGGGCTCGGCTCGCTCCTGCTGGAGCGTCTGTCGGTGGACTACGGC
CGCAAGTCCAAGCTTTCCTTCGCCATCACCCCGGCGCCGCAGGTGGCGAC
GGCGGTGGTGGAGCCGTACAACTCGGTGCTGTCCACGCACGCCCTCCTGG
AGCACACGGACTGCACCTTCTGCCTCGACAACGAGGCGCTGTACGACGTA
TGCCGCCGCAACCTCGACATCGAGCGGCCGACGTACACGAACCTGAACCG
TCTCGTGGCCCAGGTTATCTCGTCCCTGACGGCCTCGCTCCGGTTCGACG
GCGCCCTTAACGTGGACGTGACCGAGTTCCAGACCAACCTGGTGCCCTAC
CCCCGCATCCACTTCATGCTCACGTCGTACGCGCCCATCATCTCGGCGGA
GAAGGCCTACCACGAGCAGCTGTCGGTGGCGGAGATCACCAACTCGGTGT
TCGAGCCGGCCGGCATGATGACCAAGTGCGACCCCCGCCACGGCAAGTAC
ATGGCGTGCTGCCTCATGTACCGCGGAGACGTGGTGCCCAAGGACGTGAA
CGCTGCGGTGGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTGGACT
GGTGCCCCACCGGCTTCAAGTGCGGCATCAACTACCAGCCCCCGACCGTC
GTGCCCGGTGGCGACCTCGCCCGCGTGCAGCGCGCCGTGTGCATGGTGGC
CAACACCACCGCCATCGCTGAGGCTCTGTCTCGCATCGACCACAAGTTCG
ACCTCATGTACGCCAAGCGTGCGTTCGTGCACTGGTACGTGGGTGAGGGC
ATGGAGGAGGGAGAGTTCTCCGAGGCCCGTGAGGACCTGGCTGCCCTCGA
GAAGGACTACGAAGAGGTCGGCGCCGAGACCGCCGAGGGCGAGGGCGAGG
AGGAGGACGCTCTGTCTCGCATCGACCACAAGTTCGACCTCATGTACGCC
AAGCGTGCGTTCGTGCACTGGTACGTGGGTGAGGGCATGGAGGAGGGAGA
GTTCTCCGAGGCCCGTGAGGACCTGGCTGCCCTCGAGAAGGACTACGAAG
AGGTCGGCGCCGAGACCGCCGAGGGCGAGGGCGAGGAGGAGGAC
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