mRNA_E-siliculosus-1a_F_contig11128.762.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE) HSP 1 Score: 531 bits (1368), Expect = 4.130e-183 Identity = 360/451 (79.82%), Postives = 373/451 (82.71%), Query Frame = 1
Query: 1 MASINTTSNNATNNETMDNSNNSTL-YKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAADADADTTDXXXXXXXXVEPEQADDNQVSDDSNSNSGDSGDTEND------CLAFET-KTSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQQEELGRSRPGGRRGGPPPRVRHGHPXXXXXXXXXXXXXGRGMGRPRGPPPHXXXXXRHVHGHGKRPAHRDHRRSSGPVHGPPPGPFQESGRHLHHGPGHXXXXXXXXESEGEEGEMAMMHAGPRGPPHGIPXXXXXXXXXXXXXXHGMPMIDRAMHLHHGPGHXXXXXXXXXXXXXXXEDGTDMCVGPRAHPPPHGHPRDEG-RDGHSGHHGKSHLDSDGDDFMATHRPAGPPPGLPPCGQFHADNPDGNXXXXXXXXXXXXXXMMPMQPC 1326
M SINTTSNNA NNETMD+SNN TL YKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAP+KLLKG SAADA ADTTD VEPEQADDNQVSDD SGDTE+D L FET K SKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQ+EEL RSRPGGRRGGP +RHGHP X XXX GRGMGRPRGPPP+ RHVHGHGKR AH DH SSGPVH PPPGPF ESGR LH GPGHXXXXXXXX + E+ EMAM H PRGPPHG+PXXXXXXXXXXXXXXHGMPM DR MHLHHGPGHXXXXXXXXXXXXXX EDGT+MCV PRAHPPPHGHPRD G RDG SGHHGKSHLDS+GDDFMATH PAGPPPG PP G+FH D+PDGNXXXXXXXXXXX MMPMQPC
Sbjct: 1 MVSINTTSNNAMNNETMDSSNNGTLLYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADAHADTTDSSGSSGSEVEPEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELRRSRPGGRRGGPS-HLRHGHPGGPGGRXHXXXRGGRGMGRPRGPPPYGPPPHRHVHGHGKRRAHGDHLHSSGPVHEPPPGPFHESGRPLH-GPGHXXXXXXXXXXDVEQEEMAM-HTRPRGPPHGMPXXXXXXXXXXXXXXHGMPMHDREMHLHHGPGHXXXXXXXXXXXXXX-EDGTEMCVDPRAHPPPHGHPRDGGGRDGRSGHHGKSHLDSEGDDFMATHGPAGPPPGSPPRGRFHEDSPDGNXXXXXXXXXXX---MMPMQPC 444
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: D7FM13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM13_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.150e-41 Identity = 88/124 (70.97%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 958 MPMIDRAMHLHHGPGHXXXXXXXXXXXXXXXEDGTDMCVGPRAHPPPHGHPR-DEGRDGHSGHHGKSHLDSDGDDFMATHRPAGPPPGLPPCGQFHADNPDGNXXXXXXXXXXXXXXMMPMQPC 1326
MPM DR MHL+HGPGH EDGT+MC+ PRAHPPPHGHPR D GRDGHSGHH KSHLDSDGDDFMATH PAGPPPG PP G+FH DNPDGN XXXXXXXX+MPMQPC
Sbjct: 1 MPMHDREMHLNHGPGHHHHRDDVESNGSDE-EDGTEMCMVPRAHPPPHGHPRGDGGRDGHSGHHDKSHLDSDGDDFMATHWPAGPPPGSPPRGRFHEDNPDGNDNAQEHXXXXXXXXVMPMQPC 123
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.220e-37 Identity = 99/144 (68.75%), Postives = 110/144 (76.39%), Query Frame = 1
Query: 73 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAA-DADADTTDXXXXXXXX---VEPEQADDNQVSDDSNSNSGDSGDTENDCLA------FETKTSKHPVHAALVAAGITLRPRETRPLLRAL 474
LYKA ARNL EYHGVPSMTA LEKTMVLL+LRPGRLV QGLAPK+LL+G SAA DA XXXXXXXX V+PEQAD+NQVSDDSN+NS D D E+D +A ET SKHP+HA VAAG+ LRPRETRPLLR +
Sbjct: 51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIEHDHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLLRGV 194
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 141 bits (356), Expect = 3.450e-33 Identity = 86/153 (56.21%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 73 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAADADADTTDXXXXXXXXVEPEQADDNQVSDDSNSNSGDSGDTEND------CLAFETKTSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLV 513
++KA ARNLREYHGVPS+T LE TMVLL LRP RLV QGLAPK LLKG S A DAD+TD E EQA+ NQ S D +SNS D GDT ND + FE + SKHP+ A VA G+ LRPRETRPLLR + + V L +V
Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFE--AEEEQAN-NQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLLRGVVLLTSSTVALEVV 190
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5L2C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C8_9PHAE) HSP 1 Score: 137 bits (346), Expect = 6.190e-33 Identity = 97/152 (63.82%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 124 MTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAA-DADADTTDXXXXXXXXVE---PEQADDNQVSDDSNSNSGDSGDTENDCLA------FETKTSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQQEELGRSRPGG 549
MTA LEKTMVLL+LRPGRLV QGLAPK+LL G SAA DA XXXXXXXX PEQAD+N VS E+D +A E SKHP+HA VAAG+ LRPRETRPLLRALGVGPHRLVKLGLVQ+EE RSRPGG
Sbjct: 1 MTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLDGKSAAGDAXXXXXXXXXXXXXXXXXXXPEQADNNPVSXXXXXXXXXXXXIEHDNIATQDSIDMEAGASKHPIHAVFVAAGVQLRPRETRPLLRALGVGPHRLVKLGLVQREEARRSRPGG 152
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE) HSP 1 Score: 129 bits (325), Expect = 3.140e-31 Identity = 89/137 (64.96%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 73 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAADADADTTDXXXXXXXX---------VEPEQADDNQVSDDSNSNSGDSGDTENDCLA------FETKTSKHPVHAALVAAGITL 438
LYKA ARNLREYHGVPS+T LEKTMVLL+LRPGRLV QGLAPK+ L+G SAAD DAD XXXXXXXX VEPEQAD N VSD SNSNS D DTE+D +A E SKHP+HA VAAG+ L
Sbjct: 57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFLEGKSAAD-DADAXXXXXXXXXXXXXXXXXXEVEPEQADINPVSDYSNSNSSDGSDTEHDNIATQDSIDMEAGASKHPIHAVFVAAGVQL 192
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5JEF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF4_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.300e-22 Identity = 65/103 (63.11%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 124 MTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAAD-ADADTTDXXXXXXXXVEPEQADDNQVSDDSNSNSGDSGDTENDCLA------FETKTSKHPVHA 411
MTA LEKTM LL+LRPGRLV QGLAPK+LL+G SAAD ADAD TD VE EQAD+N VSDDSNSNS D DTE+D +A E SKHP+HA
Sbjct: 1 MTAGGLEKTMDLLQLRPGRLVAQGLAPKQLLEGKSAADDADADNTDSSSSSGPEVELEQADNNPVSDDSNSNSSDGSDTEHDNIATQDSIGIEAGASKHPIHA 103
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5JCF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF2_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 4.980e-17 Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 1
Query: 73 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAAD-ADADTTD 258
LYKA ARNLR+ H V SMTA LEKTMVLL+LRPGRLV QGLAPK+LLKG SAAD ADAD TD
Sbjct: 182 LYKAAARNLRDVHDVLSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLKGKSAADDADADDTD 244
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 5.410e-17 Identity = 73/183 (39.89%), Postives = 91/183 (49.73%), Query Frame = 1
Query: 73 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAADAD------------ADTTDXXXXXXXXVEPEQADDNQVSDDSN-------------------SNSGDSGDTENDCLAFETKTSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQQEEL 528
LYK ARNLREY+GVPSMTA L KT+ L+L P RLV QGLAPK LL A A+ + D +E +D++ ++ S+ + + END A E K K+ +H A +A GI LRPRE RPLL AL V P RL KLGLV + L
Sbjct: 107 LYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVK--KNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 6.440e-17 Identity = 74/183 (40.44%), Postives = 95/183 (51.91%), Query Frame = 1
Query: 73 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPKKLLKGTSAADAD------------ADTTDXXXXXXXXVEPEQADDNQ-------VSDDSNSNSG------------DSGDTENDCLAFETKTSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQQEEL 528
LYK ARNLREY+GVPSMTA L KT+ L+L P RLV QGLAPK LL A A+ + D +E +D++ VS +S++++ + + EN+ A ETK K +H A + GI LRPRE RPLL AL V P RL KLGLV ++L
Sbjct: 125 LYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETK--KDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 305 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11128.762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11128.762.1 >prot_E-siliculosus-1a_F_contig11128.762.1 ID=prot_E-siliculosus-1a_F_contig11128.762.1|Name=mRNA_E-siliculosus-1a_F_contig11128.762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=443bp MASINTTSNNATNNETMDNSNNSTLYKATARNLREYHGVPSMTADNLEKTback to top mRNA from alignment at E-siliculosus-1a_F_contig11128:296..1968+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11128.762.1 ID=mRNA_E-siliculosus-1a_F_contig11128.762.1|Name=mRNA_E-siliculosus-1a_F_contig11128.762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1673bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11128:296..1968+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11128:296..1968+ >mRNA_E-siliculosus-1a_F_contig11128.762.1 ID=mRNA_E-siliculosus-1a_F_contig11128.762.1|Name=mRNA_E-siliculosus-1a_F_contig11128.762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2658bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11128:296..1968+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |