mRNA_E-siliculosus-1a_F_contig1110.749.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI) HSP 1 Score: 1326 bits (3433), Expect = 0.000e+0 Identity = 733/770 (95.19%), Postives = 741/770 (96.23%), Query Frame = 2 Query: 56 MTGKGGHDAYGKDGPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNA------TGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEE-GVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTNAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPIPRAPTNAVSSVQSASLPTASIAVAAQNERGGDAVPRSYGREDRDITVDPAEDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLVGVGAKEVTEKASPGGEGNNLSRGAHPAVKEEATCPSLEARTEDKELCAPTRTPQQGGPSTPAPACRAMAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKNLSKASRFSMTVALLGEEDGRAAAREVLRRLEAAPPTKVDPKDVDVLRKQFSC 2344
MTGKG HDAYGKDGPGAAAFRVQHQIR+NAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRP GSTVPVSSGPAPQPS PTQKLSAKSLGCRNDGADGRPHINVNA TGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEE GVNDKRRSS XXXXXXXXXKNQGTPRLTPATM+DRSCSRGLRRPPPPKHTVAPTSTSRSSQS RDLEKEERE+GNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQ+RAAARNALGKHRAAL DLQTAAEI PTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEG+PPTV NAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIP PRAPTNAVSSVQS LPTASIAVAAQNERGGDAVPRSYGR DRDITVDPA DTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLV VGAK VTE+AS GGE NNLSRG HP VKEEATCPSLEARTEDKELCAPT+TPQQG PSTPAPACRA AHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLK+LSKASRFSMTVALLGEEDGRAAAREVLRRLEAA PTKVDPKDVDVLRKQFSC
Sbjct: 1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADGRPHINVNAANGGGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGVPPTVANAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAKAVTEQASAGGEDNNLSRGTHP-VKEEATCPSLEARTEDKELCAPTQTPQQGRPSTPAPACRATAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC 769
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA) HSP 1 Score: 171 bits (433), Expect = 9.830e-42 Identity = 129/337 (38.28%), Postives = 175/337 (51.93%), Query Frame = 2 Query: 119 VQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
VQHQIR NA +Q+Y +DL +WEKSI K+D S +RA T P AG+T PP + +G N+ ADG VN GK S HTYDKGY +W KFD+DAAL+ D++ + K +S + S L+ P P+ VA +S S++ E+ E+E GN + +GD+ A+KSYTRCLG N ++++ SNRAMA LK +EF AE D AL+ DP HVKS RR ARN+LGKHR AL+D Q AA + P S+Q++ + T E ++T ++RAPK
Sbjct: 14 VQHQIRANASQLQDYFSDLYAWEKSIGKED-------------SARKRAAKTTKKPAT--AGAT------------PPPRGARGNGVGRNNEAADG-----VN-----GKKPDS-----HTYDKGYNRWEKFDVDAALKEADED---ASTKTKSGA--------------------------ASPPLQSSPVPRRVVA------ASPSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD) HSP 1 Score: 171 bits (433), Expect = 1.160e-41 Identity = 135/355 (38.03%), Postives = 188/355 (52.96%), Query Frame = 2 Query: 95 GPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAA---GHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK-THVRVE 1147
G A+ +VQHQIR NA +Q+Y +DL SWEKSI +++ RA P +++ D P V GDS K + + A GHTYDKGY KWAKFD+DAALR D++ S+SXXXXXXXXX + A +++ + P + T+ SR E+ ERE GN + +GD+ A+K YTRCLG N +++ SNRAMA+LK +EFGKAE D + AL++DP H+KSL RR ARN+LGKHR AL+D + AAE+ P S+Q++ ++ T E ++T ++RAPK T ++E
Sbjct: 5 GASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRA----------------------------PRRRV--------QQATDATP---VEGDGDSANDKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADED---------STSXXXXXXXXXXXXXXXLSSKAVVVEET---------EPAAKASATTKSR--------EELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKRTQFKIE 294
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR) HSP 1 Score: 161 bits (408), Expect = 1.780e-39 Identity = 117/341 (34.31%), Postives = 164/341 (48.09%), Query Frame = 2 Query: 107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
+ VQHQIR NA +Q+Y +DL +WEK+I K+D R A + S + P T T I V++ G+ + HTYDKGY +W KFD+DAAL+ D++E ++ S+ G R+T + I A T+T ++ +LEKEE GN + +GD+ A+KSYTRCLG N ++++ SNRAMA LK +EF AE D AL+ DP HVKS RR ARNALGKHR AL+D AA + P S+Q++ L T ++T ++R+PK
Sbjct: 8 SVVEVQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKSPTAIAAPPPRTAT-------------------------------------------IIGVDSNGEKVSTANEKKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA-----SGTGPSRVTATSNIP----------------AASTTT----KTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.430e-39 Identity = 123/347 (35.45%), Postives = 178/347 (51.30%), Query Frame = 2 Query: 89 KDGPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
K+ ++ VQHQIR NA +Q+Y +DL +WE +I K++ S +RA + A S+V ++ P P+ + + V + G+ A + HTYDKGY +W KFD+DAAL+ D EE G+ K +S ++ G+ L AT + STS +++S +LEKEE GN + +GD+ A+KSYTRCLG N ++++ SNRAMA LK +EF AE D AL+ DP HVKS RR ARN+LGKHR AL+D Q AA + P S+Q++ L T E ++T ++R+PK
Sbjct: 22 KEDKTSSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKEN-------------SARKRAT--------KTAKSSVAANAAPPPRVA---------------------TIVGVGSNGEELYAGNEKKLDEHTYDKGYKRWDKFDVDAALKEAD-EEAGIRQKSEQASASASE----QSSGSAPLRVAT-------------------TSKASTSSTTKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPK 299
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT) HSP 1 Score: 161 bits (408), Expect = 9.730e-39 Identity = 120/340 (35.29%), Postives = 171/340 (50.29%), Query Frame = 2 Query: 119 VQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTS---TSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
+QHQIR NA +Q+Y +DL +WEKSI K+D R + SS+ TPP P PP + + V ++ ++ + S HTYDKGY +W KFD+D AL+ D+E + KN+ P+ ++ S S APT+ TS SS +++ E+ E+E GN + +GD+ A+KSYTRCLG N ++++ SNRAMA LK +E+ AE D ALR DP H KS RR ARN+LGKHR AL+D Q AA + P S+Q++K L T E ++T ++R+ K
Sbjct: 7 MQHQIRANASQLQDYFSDLYAWEKSIDKEDSMRKRATKTAKSSA----------TPPAAP----------------PPRVATT----------------VGVGSSDENARTVSLKKLDAHTYDKGYKRWEKFDVDTALKEADEEGD----------------CKQKNK-----QPSALVQPSGS-------------APTAMAKTSVSSTTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSK 270
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN) HSP 1 Score: 161 bits (408), Expect = 1.810e-38 Identity = 117/341 (34.31%), Postives = 164/341 (48.09%), Query Frame = 2 Query: 107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
+ VQHQIR NA +Q+Y +DL +WEK+I K+D R A + S + P T T I V++ G+ + HTYDKGY +W KFD+DAAL+ D++E ++ S+ G R+T + I A T+T ++ +LEKEE GN + +GD+ A+KSYTRCLG N ++++ SNRAMA LK +EF AE D AL+ DP HVKS RR ARNALGKHR AL+D AA + P S+Q++ L T ++T ++R+PK
Sbjct: 8 SVVEVQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKSPTAIAAPPPRTAT-------------------------------------------IIGVDSNGEKVSTANEKKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA-----SGTGPSRVTATSNIP----------------AASTTT----KTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL) HSP 1 Score: 157 bits (398), Expect = 2.630e-37 Identity = 123/342 (35.96%), Postives = 175/342 (51.17%), Query Frame = 2 Query: 107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVA-PTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
+ +VQ QIR NA ++Q+Y +DL +WEK+I+KK++ AM++ + VP+ G QK + SL + P G + KA + HTYDKGY KW KFD+DAAL+ D + + Q T T + P K VA P S ++S D+E+EE GN + +GD+ A+KSYTRCLG NS++++ SNRAMA LK +E+ KAE+D AL++D HVKS RR ARNALGKHR AL+D + A E+ P SKQ+ ++ T E+++T ++RAPK
Sbjct: 16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKEEATKSTAMTKQN----------------------VPLPRG---------QKTATVSLTPIS-----APEAIAPVEGPTKKADA------HTYDKGYKKWDKFDVDAALQEADGDHSA------------------EKQSAQAETTTTSL------------PTKKVVAKPKIGSVPTKSREDIEREE---GNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A5D6XFC9_9STRA (RPAP3_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFC9_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.000e-35 Identity = 112/340 (32.94%), Postives = 158/340 (46.47%), Query Frame = 2 Query: 107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAP 1126
AA QHQIR NA ++Q+Y +DL SWEK++++ ++ + + S+G A PV S P P A HTYD+GY KWAKFD++AAL+ D++ K VA +S+ E+ ERE GN + +GDF A+K YTRCLG +S++++ SNRAMA LK +EF KAE D + A++VDP H+KSL RRA ARNALGKHR AL+D + AA + P S+Q++ ++ T E L+ ++RAP
Sbjct: 8 AALETQHQIRANAAELQDYFSDLYSWEKTVERDEEARRQAKAARQPSAGGATAA--------------APVRSAPTP--------------------------------------------AAHTYDRGYYKWAKFDVEAALKEADEDGHVT---------------------------------------------KSAVAASSS---------REEIEREEGNAHYKRGDFVAAIKCYTRCLGYDSRNAVVLSNRAMAYLKNREFAKAEDDCNLAIQVDPSHLKSLSRRATARNALGKHRLALLDFERAAALDPKSRQLQNQIASTKELLRAAIKRAP 235
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A3L6VAV2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VAV2_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.680e-35 Identity = 118/320 (36.88%), Postives = 163/320 (50.94%), Query Frame = 2 Query: 110 AFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHIN--VNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSK 1063
+ VQ QIR+NA +Q+Y D+SSWEKS+ KK++QL G++R+ P ++ A S+ G+DG I +NAT D+ K + + + H YDKGY KW FD+DAAL+ VD + S + P +T ++ + ++P PP V RDL E+E GN F QG+F AV Y+R L N ++ + SNRAMA+LKL++FGKAE+D AAL VD HVKSL RRA+ARNALGKH AA DL++A ++ TSK
Sbjct: 3 SLAVQRQIRENASYLQDYFADMSSWEKSMAKKEQQLQ----------GSKRSAA--------------------------PVRRAVAMSV----RGSDGSVSIQHPLNATIDT-PTKPTKAPSHHVYDKGYKKWDSFDVDAALKEVD-----------TPSVTPHQDEEDPEEAPPARPTSTRPKKAVTVTPKKPSPPPVNVP-----------RDLL--EKEDGNMHFKQGEFAAAVNCYSRSLSYNPRNPIVLSNRAMAHLKLQQFGKAEADCTAALAVDGGHVKSLVRRASARNALGKHHAAFADLESALKLDSTSK 257 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1110.749.1 >prot_E-siliculosus-1a_F_contig1110.749.1 ID=prot_E-siliculosus-1a_F_contig1110.749.1|Name=mRNA_E-siliculosus-1a_F_contig1110.749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=770bp MTGKGGHDAYGKDGPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKback to top mRNA from alignment at E-siliculosus-1a_F_contig1110:5706..13328- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1110.749.1 ID=mRNA_E-siliculosus-1a_F_contig1110.749.1|Name=mRNA_E-siliculosus-1a_F_contig1110.749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7623bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:5706..13328- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1110:5706..13328- >mRNA_E-siliculosus-1a_F_contig1110.749.1 ID=mRNA_E-siliculosus-1a_F_contig1110.749.1|Name=mRNA_E-siliculosus-1a_F_contig1110.749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4620bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:5706..13328- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |