mRNA_E-siliculosus-1a_F_contig1110.748.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A6H5KCL5_9PHAE (GMC_OxRdtase_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCL5_9PHAE) HSP 1 Score: 1115 bits (2883), Expect = 0.000e+0 Identity = 557/580 (96.03%), Postives = 566/580 (97.59%), Query Frame = 3 Query: 3 DFHWEVMDHTKDEHQNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRKGKTGDHRE 1742 DFHWEVMDHTK+EHQNALVAKALGGCGIHNAMLYVRGLESDF+KWDVEGFDYASAVETWK NENYTG PLPEWHGRGG IATSPPDFIDEVAPFF+DSCEGAGI+LTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPT SED+D TVAS EGK GRTVPAATGVEFVLDGKVEQVNIAAPGSHGR+GSAVVVTAGAL TPKLLMTSGIG+KAELE HGLGCIA+VPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDL FPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILAL NIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQT+PLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRKGK GDHRE Sbjct: 100 DFHWEVMDHTKEEHQNALVAKALGGCGIHNAMLYVRGLESDFAKWDVEGFDYASAVETWKMNENYTGPEPLPEWHGRGGLIATSPPDFIDEVAPFFVDSCEGAGIKLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTESEDDDDTVASRLEGKGGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRAGSAVVVTAGALLTPKLLMTSGIGDKAELEGHGLGCIANVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLGFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALANIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRKGKIGDHRE 679
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A835YLF3_9STRA (Choline dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF3_9STRA) HSP 1 Score: 421 bits (1081), Expect = 3.010e-131 Identity = 263/637 (41.29%), Postives = 353/637 (55.42%), Query Frame = 3 Query: 3 DFHWEVMDHTKDEHQNALVAKALGG---------------------CGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYT---GRG---------------------------------------PLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGV--DSDDLTNGEQNAP-SIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEP--DPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARM--GKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADA 1703 ++HW V+D T+ NALVAKALGG CGIHNAMLYVR ++ DF W V+G+ + A+E +K + + G G P P+WHG GPI SPP ++DEVA FF++SC G+ + +DFN+PG REGAG Y FA+R+GVRDSAARA+LG I+ G+ R NL I++ A VS++L+E D T +VV+ GAL TP+LLM SGIG+ L G+ C+ADVP +G+NLQDH VG+M+ G +L+ PSAY +A ELE+YK+ V++A +++FPPGVT+ GV +D ++P +F+S G +AGAFL S SN + PDIQLTVFP+VTEPHI L + RP Q P +L+T+++L PEGR V L+ + P P I G+P L+ELD ++AW VG+VR I + PL + V PG +DD A L WV++H+YSNSHWCGTARM G A DP +VV+ER++V GV +L V DASV+P IPNGNVHSTVVL+A++ A L+ DA Sbjct: 153 EYHWNVVDTTQRGEPNALVAKALGGEGGRGEGRXXXXXXXXXXXXXCGIHNAMLYVRAIKEDFDAWGVDGWTWEMALEHYKGATSVSAAAGAGIADEPCGCVARTERAPSQRLAMECYDTTAGGRIETQPPPPTPDWHGTAGPITNSPPLWVDEVAAFFIESCAYLGLPVVDDFNRPGAREGAGLYTFAIREGVRDSAARALLGPIISGKVPRPNLTILSKAEVSQILLE-----------ADTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXIVVSGGALMTPRLLMASGIGDARALADAGVACVADVPGVGRNLQDHPGVGLMFTAGHTLLERYPSAYKLALELEKYKLNVMRALEIDFPPGVTMAGVIDAADQEGTPVWSSPFGLFASTGQTAGAFLCSGL------SNTTVPDIQLTVFPQVTEPHIQVLNHTRPVNQESPAVLITIALLRPEGRKAVALDAEAPLSRPPRIV-----GDPALPVLTELDVARIAWAVGRVREIQRAPPLRDVTLRSVTPG-----LSDDMA--PAALRAWVREHIYSNSHWCGTARMANGDADDPLAVVDERLRVRGVRHLRVADASVIPVIPNGNVHSTVVLMASRGAELLLEDA 756
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A4D9CPB5_9STRA (GMC_OxRdtase_N domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPB5_9STRA) HSP 1 Score: 371 bits (953), Expect = 1.280e-112 Identity = 235/609 (38.59%), Postives = 341/609 (55.99%), Query Frame = 3 Query: 3 DFHWEVMDHTKDEHQNALVAKALGGCGIHNAMLYVRGLESDFSKWDVE--GFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDG-KVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTI--------------GGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILA----------------LVNIRPSAQAPPM-------MLVTVSVLDPEGRCVVRLNEDDPHRG-----NPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLV 1694 D+HW+V + A++AK LGGCG HNAMLYVR L DF W++ G+ + +A+ E++ G P +HG+GGPI ++PP ++D+VAP+FL++C G+ +++DFN P GR GA YYHF +++GVR SAARA LG I+ D R+NLDIV A V+ VL +S KDG V ATGV F +G + + +PG G+ VV+TAGA+HTPK+LM SG+G + +LE G+ + D+P +G+NLQDH SV + + L + + +A + +EL YK V++ ++ G T GG D +Q +IF+S+G +AGAFLKS S ++ PD+QLTVFPR++EPH++ N+ + PP MLVT+++LDP+ R V L+ D G ++ + EG LS++D KL WGV VR IA+T+P+ E + E PGP D E V L WV+++ + NSHWCG+ +M K DP VV+ R+ V+GVD L V DASV P IP+GN HSTV++VA++ A +++ Sbjct: 189 DYHWDV--------EGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDG--PPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIM---DKRSNLDIVLKAEVTHVL--------------------MSGEKDG--VYTATGVSFAAEGGDSREARLKSPG-RGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAGSF-EELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVLEANVSASEGEGF---LSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGP-------DLVDEGV-LKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFIL 749
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: M4BBH5_HYAAE (GMC_OxRdtase_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBH5_HYAAE) HSP 1 Score: 303 bits (775), Expect = 3.460e-88 Identity = 211/586 (36.01%), Postives = 303/586 (51.71%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIV---MGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEF-VLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718 F+W ++ +T H + VAKALGGCG+HNAMLYVR L SD +WD+ + + A+E + E++ G P +HG G TSPP ++ F+++C AGI T DFN PGGR GAGYYHF RDG+R+SAA+ LG ++ R+N ++ V+K+ I N+ VA GVE +G E + +A G V+VTAGA++TPK+LM SGIG+ LE GL +P +G NLQDH VG+ + P + EL+ Y M ++ D T ++ +F SAGLSAGAFL P GS + P+IQLT+FPR +EPHI + + ++++TV++L P R V+ +EDD + PH+ ++ EGE + L D K++W +G VR I + E+ PG G+S +GED+D WV + NSHW G+A M + + VV+ ++V GV +L V DASV+P IPNGNVHS+VV++A++ A L D A R+ Sbjct: 124 FYWTIVVNTPPLHWPYPDVNVAKALGGCGVHNAMLYVRVLPSDLERWDITNWTWEKALEIYTSIEDFDG--PNTSYHGTRGFFRTSPPAVKTNLSHEFIEACVQAGIPRTMDFNAPGGRHGAGYYHFNTRDGIRESAAKTFLGPMLDNNTAESTRSNFRLMLDTMVTKINI------------NEQNVAE--------------GVEVRYANGTAEVIRLAELGE-------VIVTAGAINTPKILMLSGIGDYVTLEKAGLPTKKHLPWVGMNLQDHPVVGMSFKYDPK------EEVDLEAELDAYFMAT-----------------NARDTT---ASSYGLFGSAGLSAGAFLT------PPGS--TVPEIQLTLFPRKSEPHICTTATLNHAT----VVVITVALLHPLARNRVVLIHDEDDSVDDDYVDHLVPHVVSEESEGEAEHLRPGDVWKISWAIGVVRNITSKLAERNVIGHEIAPGVGIS------SGEDLDR--WVLSAAFRNSHWVGSASMANTEE-EGVVDNHLRVFGVQHLRVADASVMPLIPNGNVHSSVVMIASRAAQILREDEAEYRR 627
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A8K1FKT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKT7_PYTOL) HSP 1 Score: 301 bits (772), Expect = 7.090e-88 Identity = 205/569 (36.03%), Postives = 295/569 (51.85%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFV-LDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVAD 1700 FHW + +T+ H + VAKALGGCGIHNAMLYVR L SDF +WD+ + + A+E + E++ G P ++HG+ G + TSPP FIDE++ F+ + E GI + DFN P GR G G+YHF R GVR+SAAR LG I+ + R N ++ + V K+++ +A A GVE LDG + + +A G V+VT GA++TPK+LM SG+G+ +L+A + +P +G NLQDH + + + M + EL Y F+ V + + + SAG+SAGAFL P + P+IQLT FPR +EPH+ + SA+ +L TV++L P+ R V L+ ++ P I + E E + L + D KL+WG+ VR IA L E+ PGP + D L WV+ +V+ NSHW G+A MG + D K+VV+ ++V G+ NL V DASV+PYIPNGNVHS+V++VAT A + D Sbjct: 130 FHWSSVANTQVYHWDYPDVNVAKALGGCGIHNAMLYVRALPSDFHRWDMPKWTWQKALEIYLHMEDFDG--PESDYHGKNGTVRTSPPSFIDELSYEFVAASEHVGIPRSPDFNAPNGRFGVGFYHFNTRHGVRESAARRFLGPILEAK--RENFKLLLNSTVQKIVLNEA-------------------------ATKAEGVEIERLDGTRQTIRLAKRGQ-------VIVTGGAINTPKILMMSGLGHSGDLKALKIPVKRHLPRVGMNLQDHPVLAMAFSTP------MAREIDLHAELTSY-------FEATQEKHVNV-------------TSYGMMGSAGISAGAFLIPP--------GKTIPEIQLTFFPRKSEPHVWNSSELNHSAE----ILFTVALLHPKARNRVILSTENNVDYLPRIVSEVPEQEEEHLRDSDVWKLSWGITVVREIAAVLAQKGVLARELTPGPQIRAMED--------LNAWVRNNVFRNSHWVGSASMGPSPD-KAVVDNHLRVFGIPNLRVADASVIPYIPNGNVHSSVLMVATHAAELIKED 615
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A2P4YUG4_9STRA (Choline dehydrogenase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUG4_9STRA) HSP 1 Score: 294 bits (752), Expect = 3.910e-85 Identity = 206/586 (35.15%), Postives = 305/586 (52.05%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIV---MGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGN---------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718 F+W + +T H + VAKALGGCGIHNAMLY+R L +D +W ++ + + A++ + E++ G P +H G + TSPP +++ F+++C GI TEDFN P GR GAGYYHF RDGVR+SAA+A LG I+ + R+N ++ V+K+ I D +++EG + R +G V+ + +A HG V+VTAGA++TPK+LM SG+GN+ L+ GL +P +G NLQDH VG+++ P + +L+ Y KA + G +F SAGLSAGAFL P GS + P+IQLT+FPR +EPH+ + Q ++VT+++L P R V L DD + P + + + +P+ L E D K++W +G VR IA+ + + E+ PG V+ + D L WV +V+ NSHW G+A MGK ++ + VV+ ++V GV NL V DASV+P IPNGNVHS+VV+VA + A + D A R+ Sbjct: 97 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYIRALPTDMGRWKMDKWTWEKALDIYMSIEDFDG--PNSSYHSTRGFLRTSPPSLKLDISAEFIEACAELGIPRTEDFNAPDGRYGAGYYHFNTRDGVRESAAKAFLGPILDSDTAQSTRSNFRLMLDTTVTKIGINDE---------------NVTEGVEVR----------YGNGTVQLIRLA---EHGE----VIVTAGAINTPKILMLSGLGNRDTLKKAGLPLTKHLPRVGMNLQDHPVVGMIFECEA------PRIVDLKMDLDSY----FKATSTKHANASSFG----------------LFGSAGLSAGAFLI------PPGS--TIPEIQLTLFPRKSEPHMSNSAGLNHMTQ----VVVTIALLHPLARNRVVLVHDDRDSVDDNDIDNHLIPRVVSEVPDAKPEHLREGDVWKISWAMGVVREIAKNLAEKKVIGRELSPGADVASSKD--------LNNWVFNNVFRNSHWVGSASMGK-TEVEGVVDNHLRVFGVKNLRVADASVIPLIPNGNVHSSVVMVANRAAQIIREDQAKNRQ 601
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A329SU49_9STRA (GMC_OxRdtase_N domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SU49_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.810e-84 Identity = 213/585 (36.41%), Postives = 302/585 (51.62%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIV---MGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN-------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVR 1715 F+W + +T H + VAKALGGCGIHNAMLYVR L SD +W ++ + + A++ + E++ G P +H G + TSPP +V+ F+D+C GI LT DFN P GR G GYYHF RDGVR+SAA+A LG I+ G R N ++ V+K+ I+D A GVE EQ+ A HG V+VTAGA++TPK+LM SG+GNK L+ GL +P +G NLQDH VG+++ P + + +L+ Y KA TN +F SAG+SAGAFL P G+ + P+IQLT+FPR +EPH+ + + ++VT+++L P R V+ NEDD N P + + E +P+ L + D K++W +G VR IA +LR + G +S AD + +D+D WV +V+ NSHW G+A M A++ + VV+ ++V G+ +L V DASV+P+IPNGNVHSTVV+VA + A L D A R Sbjct: 129 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLERWKMKNWTWDKALDIYMGIEDFDG--PNSSYHSNRGFVRTSPPAMELDVSKEFVDACVELGIPLTADFNAPDGRYGVGYYHFNTRDGVRESAAKAFLGPILDSKTGESTRKNFRLMLDTTVTKIGIDDDS--------------------------VAEGVEVRYGNGTEQLIRLA--KHGE----VIVTAGAINTPKILMLSGLGNKDTLKKAGLPLKKHLPRVGMNLQDHPVVGMVFEYNA------PRSVDLKADLDSY----FKA-------------------TNASSFG--LFGSAGISAGAFLI------PPGA--TKPEIQLTLFPRKSEPHMSNSAGLDHMTE----VVVTIALLHPLARNRVVLIHNEDDSVDDNDIDDHLIPRVVSEVPETKPEHLRQGDVWKISWAIGVVREIAA------KLREKNVIGREISPGADIASSKDLD--NWVFDNVFRNSHWVGSASMA-ATENEGVVDNHLRVFGIQSLRVADASVIPFIPNGNVHSTVVMVANRAAQILREDEAEYR 627
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: H3GVB4_PHYRM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVB4_PHYRM) HSP 1 Score: 293 bits (749), Expect = 2.260e-84 Identity = 208/589 (35.31%), Postives = 306/589 (51.95%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLG---DIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHI---LALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN-------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718 F+W + +T H + VAKALGGCGIHNAMLYVR L SD +W ++G+ + +E + E+Y G P +H G + TS P + + FL++CE GI T+DFN PGGR GAGYYHF RDGVR+SAA+A LG D + R+N ++ V+++ I + +++EG + R +G V+ + +AA HG V+VTAGA++TPK+LM SG+GN+ L+ GL +P +G NLQDH VG+ + + +L+ Y KA + P + G +F +AG+S GAFL P G+ + P+IQLT+FP+ +EPH+ AL ++ ++VT+++L P R V+ ++DD N P I + E EP+ L E D K++W +G VR I + + E+ PG G++ + D L WV V+ NSHW G+A MGK+ D VV++ ++V G+ NL V DAS++P IPNGNVHS+VV+VA + A L D A R+ Sbjct: 128 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLERWQMQGWTWERTLEIYMSIEDYDG--PNSSFHSTRGFVRTSKPAMKMDFSSDFLEACEELGIPRTDDFNAPGGRYGAGYYHFNTRDGVRESAAKAFLGPMLDSKTAQSTRSNFQLMLDTTVTRIRINEQ---------------NVTEGVEVR----------YGNGTVQLIRLAA---HGE----VIVTAGAINTPKILMLSGLGNRDTLKKAGLPLKKHLPRVGMNLQDHPVVGMTFECEA------ARVVDLQSDLDSY----FKATNAKHPNASSFG----------------LFGTAGISVGAFLI------PPGA--TLPEIQLTLFPKKSEPHMSNSAALDHVHE-------VVVTIALLHPLARNRVVLIHDDDDSVDDNDIDDHLIPRIVSEVPEFEPEHLREGDVWKISWAIGVVRDIMGKLAEKDLIGREIAPGIGITSSKD--------LDEWVLNSVFRNSHWVGSASMGKSEDD-GVVDDHLRVFGIKNLRVADASIIPLIPNGNVHSSVVMVANRAAEILREDEAEYRR 632
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A6A3DYS6_9STRA (GMC_OxRdtase_N domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DYS6_9STRA) HSP 1 Score: 292 bits (748), Expect = 3.710e-84 Identity = 212/586 (36.18%), Postives = 302/586 (51.54%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLG---DIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN-------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718 F+W + +T H + VAKALGGCGIHNAMLYVR L SD +W ++ + + A++ + + E++ G P +H G + TSP ++ F+++CE GI T DFN PGGR GAGYYHF +RDGVR+SAA+A LG D G ++N ++ V+++ I D N+ T GVE EQ+ A HG V+VTAGA++TPK+LM SGIGN+ L GL +P +G NLQDH VG+ + +P A + EL+ Y LN S TN +F SAG+SAGAFL P GS + P+IQLT+FPR +EPH+ + + +++T+++L P R V+ ++DD N P + + E +P+ L D K+ W +G VR IA + + E+ PG D T+ +D+D WV V+ N+HW G+A MG + D ++VV+ ++V G+ NL V DASV+P IPNGNVHSTVV+VA + A L D A R+ Sbjct: 135 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLERWQMDKWTWEEALDIYMQIEDFDG--PNSSYHSTKGFVRTSPLAVESMLSNEFIEACEQLGIPRTTDFNAPGGRYGAGYYHFNIRDGVRESAAKAFLGPMLDSKTGESTKSNFRLMLDTTVTRIRIND----------NNVT----------------EGVEVRFRNGTEQLIRLA--EHGE----VIVTAGAINTPKVLMLSGIGNRDALRKVGLPLKKHLPRVGMNLQDHPVVGMTFECE------LPRAVDLKSELDSY---------LN---------AASSKHTNASSFG--LFGSAGISAGAFLI------PPGS--TLPEIQLTLFPRKSEPHMSNSAELNHVTE----VIITIALLHPLARNRVVLVHDDDDSVDDNDIDDHLIPRVVSEVPEAKPEHLRAGDVWKITWAIGVVREIAAKLAEKDLIGKEITPG------VDVTSSKDLDE--WVLNSVFRNTHWVGSASMGTSED-EAVVDNHLRVFGIKNLRVADASVIPRIPNGNVHSTVVMVANRAAQILREDEADYRR 639
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A2D4CBF4_PYTIN (GMC_OxRdtase_N domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBF4_PYTIN) HSP 1 Score: 297 bits (761), Expect = 5.800e-82 Identity = 209/571 (36.60%), Postives = 303/571 (53.06%), Query Frame = 3 Query: 6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFV-LDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPS--IFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVAD 1700 F+W + +T H + VAKALGGCGIHNAMLYVR L SD +W + + + A+E + E++ G P E+HG G + TSPP D ++ F+++ E GI T+DFN P GR G G+YHF RDGVR+SAAR +G ++ ++ R+N ++ V+++ ++ G T ATGVE V DG + + ++A G+ V+VTAGA++TPK+LM SG+G+K +L+ GL I +P +G NLQDH V V + P+ P + EL Y T ++NA S + SAG+SAGAFL P GS + P+IQLT+FPR +EPH+ + ++Q +LVTV++L P+ R V L + + P I + E E + L E D KL+WGV VR IA E+ PG VS D L+ W+ V+ NSHW G+A MG ++D +VV+ ++V G+ N+ V DAS++P IPNGNVHS+V++VA+ A + AD Sbjct: 50 FYWTNVANTPALHWDYPDVNVAKALGGCGIHNAMLYVRALPSDLHRWGMSKWTWKKALELYTHMEDFDG--PSSEFHGDSGIVRTSPPSLADSLSLAFVEASEEIGIPRTDDFNAPHGRHGVGFYHFNTRDGVRESAARRFVGPML--KEGRSNFHLLLNTEVTRIQFDER----------------------GET---ATGVEVVHSDGTRQLIRVSAQGN-------VIVTAGAVNTPKVLMQSGVGHKDDLKQLGLPVIKHLPRVGMNLQDHPVVAVAFE-NPN-----PVPVDLNSELATYFAAT----------------------TRQDKNATSYGMMGSAGISAGAFLV------PPGS--TLPEIQLTLFPRKSEPHVSNSSELNHASQ----ILVTVALLHPKARNRVVLEKASNGQFIPRIVSEVPEREAEHLREDDVWKLSWGVAVVREIAAALARKGLFGAEITPGSSVSTMDD--------LIKWIPNAVFRNSHWVGSAAMGHSADT-AVVDNHLRVFGLTNVRVADASIIPSIPNGNVHSSVLMVASHGAQLIRAD 535 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1110.748.1 >prot_E-siliculosus-1a_F_contig1110.748.1 ID=prot_E-siliculosus-1a_F_contig1110.748.1|Name=mRNA_E-siliculosus-1a_F_contig1110.748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=575bp MDHTKDEHQNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVback to top mRNA from alignment at E-siliculosus-1a_F_contig1110:321..5673+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1110.748.1 ID=mRNA_E-siliculosus-1a_F_contig1110.748.1|Name=mRNA_E-siliculosus-1a_F_contig1110.748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5353bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:321..5673+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1110:321..5673+ >mRNA_E-siliculosus-1a_F_contig1110.748.1 ID=mRNA_E-siliculosus-1a_F_contig1110.748.1|Name=mRNA_E-siliculosus-1a_F_contig1110.748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3450bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:321..5673+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |