mRNA_E-siliculosus-1a_F_contig1109.738.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: D7FUY1_ECTSI (Lipoyl(octanoyl) transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY1_ECTSI) HSP 1 Score: 698 bits (1801), Expect = 8.080e-251 Identity = 351/373 (94.10%), Postives = 358/373 (95.98%), Query Frame = 2 Query: 56 MWHRACHSLWPQRNRLSPQALPPPPRATSISSISHQERRRHPVGTRGCSRRCLVGTSTPXXXXXXX------RKCLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARVDGTGVTASNAADNHAVDMGSVRSLVMQEFEGVFGVTIEVVDVDAAAHSRGDDELEREIFPADCEPQLLSRLQADSLRQLELTRR 1156 MWHRACHSLWPQRNRL PQALPPPPRATSISSISHQERRRHPVGTR SRRCLVGTSTPXXXXXXX RKCLVYNITGG+VPYDRAWLWQQRLLHERMAWQREE PSQDS+DVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGL GERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNP+LSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARVDGTGVTASNA DNHAVDMGSVRSLVMQEFE VFGV ++VVDVDAAAHS GDD+LE+EIFPADCEPQLLSRLQADSLRQLELTRR Sbjct: 1 MWHRACHSLWPQRNRLPPQALPPPPRATSISSISHQERRRHPVGTRVGSRRCLVGTSTPXXXXXXXXXXXXXRKCLVYNITGGSVPYDRAWLWQQRLLHERMAWQREEYPSQDSYDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLEGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPDLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARVDGTGVTASNAVDNHAVDMGSVRSLVMQEFEDVFGVRVQVVDVDAAAHSSGDDDLEKEIFPADCEPQLLSRLQADSLRQLELTRR 373
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: A0A6H5JUQ5_9PHAE (Lipoyl(octanoyl) transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ5_9PHAE) HSP 1 Score: 517 bits (1332), Expect = 4.130e-181 Identity = 255/272 (93.75%), Postives = 260/272 (95.59%), Query Frame = 2 Query: 341 MAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARVDGTGVTASNAADNHAVDMGSVRSLVMQEFEGVFGVTIEVVDVDAAAHSRGDDELEREIFPADCEPQLLSRLQADSLRQLELTRR 1156 MAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSL GREVRRTERGGEVTWHGPGQVVGYPVLDLNFH KDLHWY+RQLEEVVIRVLGRYGL GERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNP+LSAFEAIVPCGIQGRPVTRLCDLVG ETW PPS EQIE AARVDGT VTASNAADNHAVDMGSVRSLVMQEFEGVFG+ IEVVDVDAAA GDD+LEREIFPADCEPQLL+RLQADSLRQLELTRR Sbjct: 1 MAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLDGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHNKDLHWYMRQLEEVVIRVLGRYGLEGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPDLSAFEAIVPCGIQGRPVTRLCDLVGTETWFPPSAEQIENAARVDGTDVTASNAADNHAVDMGSVRSLVMQEFEGVFGLRIEVVDVDAAADGSGDDDLEREIFPADCEPQLLARLQADSLRQLELTRR 272
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: A0A835YUM8_9STRA (Lipoyl(octanoyl) transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM8_9STRA) HSP 1 Score: 260 bits (664), Expect = 6.720e-81 Identity = 124/198 (62.63%), Postives = 148/198 (74.75%), Query Frame = 2 Query: 254 RKCLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSH--DVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCD 841 R+C VY++ VPY AW WQQ LL +RMAWQR+ + D L++LEHP VYTLGRGS+ ++L+FDP P E+ R ERGGEVTWHGPGQ+VGYP+LDLNFH KDLHWYLR LEE+++RVL R G+ GER+ +TGVWVG K AAIGLNASRWVTSHGFALNV P+LSAF+ IVPCGI + V L D Sbjct: 10 RRCRVYSVEDRQVPYAEAWAWQQSLLRQRMAWQRQRGGDSPHYGCDALILLEHPSVYTLGRGSTTENLKFDPAAPGCP--HELYRIERGGEVTWHGPGQIVGYPILDLNFHTKDLHWYLRSLEEMIMRVLARRGVQGERDPGNTGVWVGNRKYAAIGLNASRWVTSHGFALNVCPDLSAFDNIVPCGISDKSVGCLAD 205
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: A0A251WGY3_9CYAN (Octanoyltransferase n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WGY3_9CYAN) HSP 1 Score: 228 bits (582), Expect = 1.490e-68 Identity = 118/217 (54.38%), Postives = 145/217 (66.82%), Query Frame = 2 Query: 254 RKCLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARV 904 R C +Y G VPY AW WQQ+ + +R A + D D L++LEHPPVYTLG+GS L+FDP E+ R ERGGEVT+H PGQ+VGYP+L+L ++KDLHWYLRQLEEV+I+VLG YGL G+R E TGVWV GAKVAAIG+ SRW+T HGFALNV P+LS F IVPCGI +PV R+ D + T P ++K A V Sbjct: 12 RSCRLYQ--PGLVPYAEAWAWQQQQVRDRKA---QIDAGLDPADSLMLLEHPPVYTLGQGSDAGFLKFDPQTAEY----ELHRIERGGEVTYHCPGQLVGYPILNLQHYRKDLHWYLRQLEEVIIQVLGEYGLQGDRVPELTGVWVEGAKVAAIGIKVSRWITMHGFALNVCPDLSGFSQIVPCGIADKPVGRMTDWLPDLTVEQVLPIVVQKFAEV 219
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: B4VX66_9CYAN (Octanoyltransferase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VX66_9CYAN) HSP 1 Score: 228 bits (580), Expect = 2.430e-68 Identity = 119/217 (54.84%), Postives = 151/217 (69.59%), Query Frame = 2 Query: 254 RKCLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARV 904 R+CL+YN G +PY AW Q+ LL +R+ P+ D DVLL++EHPPVYTLG+G+SLD L+F+PT+ EV R ERGGEVT+H PGQ+VGYP+L+L ++++DLHWYLRQLE V+I VL YGL G+RET TGVW+ G KVAAIG+ SRW+T HGFALNV+P+LS F+ IVPCGI +PV L + T P I K A V Sbjct: 4 RQCLLYN--QGLIPYTVAWEQQRSLLSQRI-----NDPTLD--DVLLLMEHPPVYTLGQGASLDFLKFNPTEADL----EVHRIERGGEVTYHCPGQLVGYPILNLRYYQQDLHWYLRQLEAVLIEVLAVYGLKGDRETGMTGVWLEGRKVAAIGIKVSRWITMHGFALNVDPDLSGFKRIVPCGIADKPVGSLAQFIPNITVDQVRPIVIAKFAEV 207
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: A0A352X5S4_9CYAN (Octanoyltransferase n=1 Tax=Cyanobacteria bacterium UBA11367 TaxID=2055774 RepID=A0A352X5S4_9CYAN) HSP 1 Score: 227 bits (579), Expect = 2.630e-68 Identity = 120/217 (55.30%), Postives = 152/217 (70.05%), Query Frame = 2 Query: 254 RKCLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARV 904 R+CLV N+ G VPY AW Q+ LL +R+A PS + DVLL+LEHPPVY+LG+G+SL+ L+FDP + + EV R ERGGEVT+H PGQ+VGYP+L+L ++++DLHWYLRQLEEV+IRVLG YGL G+R TGVW+ G KVAAIG+ SRW+T HGFALNV P+LS F I+PCGI +PV L D + T + P K A V Sbjct: 3 RRCLVNNL--GIVPYTLAWEKQRSLLAQRVA-----DPSLE--DVLLLLEHPPVYSLGQGASLEFLKFDPAEVNW----EVHRVERGGEVTYHCPGQLVGYPILNLRYYQQDLHWYLRQLEEVLIRVLGIYGLKGDRIEGMTGVWLAGCKVAAIGIKVSRWLTMHGFALNVCPDLSGFNRIIPCGIMDKPVGSLADFIPGITVAEVLPLVASKFAEV 206
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: A0A8J7KHT2_9CYAN (Octanoyltransferase n=3 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7KHT2_9CYAN) HSP 1 Score: 227 bits (578), Expect = 4.820e-68 Identity = 117/198 (59.09%), Postives = 139/198 (70.20%), Query Frame = 2 Query: 254 RKCLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLV 847 R+CL Y+ G VPY+ AW WQQ + ER + D DVLL+LEHPPVYTLG+G+SLD L+FD L + RTERGGEVT+H PGQ+VGYP+L+L +++DLHWYLRQLEEV+IRVL YGL GER TGVWV G KVAAIG+ SRW+T HGFALNV P+LS FE IVPCGI +PV L V Sbjct: 4 RRCLFYHY--GLVPYETAWNWQQSFVAERRQ-------TADLDDVLLLLEHPPVYTLGQGASLDFLKFDLDKTLHL----LYRTERGGEVTYHCPGQLVGYPILNLRHYRQDLHWYLRQLEEVLIRVLALYGLTGERIPGLTGVWVKGCKVAAIGIKVSRWITMHGFALNVCPDLSGFEQIVPCGIADKPVGSLAQFV 188
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: K9PEL4_9CYAN (Octanoyltransferase n=1 Tax=Calothrix sp. PCC 7507 TaxID=99598 RepID=K9PEL4_9CYAN) HSP 1 Score: 225 bits (574), Expect = 2.090e-67 Identity = 127/250 (50.80%), Postives = 156/250 (62.40%), Query Frame = 2 Query: 260 CLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLVGAETWSPPSPEQIEKAARVDGTGVTASNAADNHAVDMGSVRSLVMQEFEGVFGV 1009 CL+YN G +PY AW WQ+ LL +R+ +PS D DVL++LEHPPVYTLG+G+S + L+F+P + EV R ERGGEVT+H PGQ+VGYP+L+L +++DLHWYLRQLEEV+IRVL YGL GER TGVWV G KVAAIG+ SRW+T HGFALNV P +S F+ IVPCGI +PV L + W P G+T VRS V Q F GVFGV Sbjct: 12 CLLYN--QGLIPYLEAWEWQRSLLGDRI-----RNPSLD--DVLILLEHPPVYTLGQGASPEFLKFNPDEIPY----EVHRVERGGEVTYHCPGQLVGYPILNLQRYRQDLHWYLRQLEEVLIRVLAVYGLQGERIAAFTGVWVEGRKVAAIGIKVSRWITMHGFALNVCPEMSGFQQIVPCGITDKPVGSLAE------WIP---------------GITCEE-----------VRSHVAQSFAGVFGV 216
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: UPI001684ED1E (Lipoyl(Octanoyl) transferase LipB n=2 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI001684ED1E) HSP 1 Score: 225 bits (573), Expect = 2.760e-67 Identity = 117/197 (59.39%), Postives = 139/197 (70.56%), Query Frame = 2 Query: 269 YNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCD-LVGAE 856 Y +T G VPYDRAW WQ+ L+ R A R+ DVL +LEHPPVYTLG+GS L+FDPT +V RTERGGEVT+H PGQ+VGY +L+LN +++DLHWYLRQLEEV+IRVL +YGL GER + TGVWV G KVAAIG+ SRW+T HGFALNV P+LS F IVPCGI +PV L L G E Sbjct: 7 YLVTPGLVPYDRAWQWQRSLVESRRADPRQT-------DVLFLLEHPPVYTLGQGSDPGFLKFDPTHTEW----QVVRTERGGEVTYHCPGQLVGYAILNLNHYQRDLHWYLRQLEEVLIRVLSQYGLQGERISGLTGVWVEGRKVAAIGIKVSRWITMHGFALNVCPDLSGFSHIVPCGIADKPVGSLAQWLPGVE 192
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Match: A0A1Z4I5R9_9NOSO (Octanoyltransferase n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A1Z4I5R9_9NOSO) HSP 1 Score: 224 bits (570), Expect = 7.700e-67 Identity = 113/196 (57.65%), Postives = 141/196 (71.94%), Query Frame = 2 Query: 260 CLVYNITGGAVPYDRAWLWQQRLLHERMAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLGGREVRRTERGGEVTWHGPGQVVGYPVLDLNFHKKDLHWYLRQLEEVVIRVLGRYGLVGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPNLSAFEAIVPCGIQGRPVTRLCDLV 847 C+VYN G +PY A WQ+ LL +R+ ++P+ D DVL++LEHPPVYTLG+GSSLD L+FDP E+ R ERGGEVT+H PGQ+VGYP+L+L+ H KDLHWYLRQLEEV+IRVL YGL G+R TGVW+ G K+AAIG+ SRWVT HGFALNV P+++ FE IVPCGI +PV L + Sbjct: 12 CVVYN--KGLMPYTEAHAWQRSLLRDRI-----DNPNLD--DVLILLEHPPVYTLGQGSSLDFLKFDPNQSEF----EIHRIERGGEVTYHCPGQLVGYPILNLHRHCKDLHWYLRQLEEVIIRVLAVYGLKGDRTPPLTGVWLEGRKIAAIGIKVSRWVTMHGFALNVCPDMTGFEQIVPCGIADKPVGSLAQWI 194 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1109.738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1109.738.1 >prot_E-siliculosus-1a_F_contig1109.738.1 ID=prot_E-siliculosus-1a_F_contig1109.738.1|Name=mRNA_E-siliculosus-1a_F_contig1109.738.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=368bp MWHRACHSLWPQRNRLSPQALPPPPRATSISSISHQERRRHPVGTRGCSRback to top mRNA from alignment at E-siliculosus-1a_F_contig1109:16051..17977- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1109.738.1 ID=mRNA_E-siliculosus-1a_F_contig1109.738.1|Name=mRNA_E-siliculosus-1a_F_contig1109.738.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1927bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1109:16051..17977- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1109:16051..17977- >mRNA_E-siliculosus-1a_F_contig1109.738.1 ID=mRNA_E-siliculosus-1a_F_contig1109.738.1|Name=mRNA_E-siliculosus-1a_F_contig1109.738.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2208bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1109:16051..17977- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |