mRNA_E-siliculosus-1a_F_contig1109.736.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: D7FUX9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX9_ECTSI) HSP 1 Score: 961 bits (2485), Expect = 0.000e+0 Identity = 501/524 (95.61%), Postives = 505/524 (96.37%), Query Frame = 1 Query: 109 MVPVFDERWAKPGSTRVANDRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGALGSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXX-RVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAREKMAGETVVAVDNGEADAGEDQDEGXXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPDRRFSMEQAFDWMDSHPEMY 1677
MVP FDERWAKPGST VANDRDDADEAFARASPQSWMQEKL MLQLRLEIDGDLTRFQPPQVFVVNIEDGA+GSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVAD KGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERN NEG XXXXXX RVAAGLSPSIFRATV+VFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRK+VHRDVKPENILLDDAGGFARLCDFGFAKHAPSVTPADL GDPTTCYQAPERWQAC SP AARAREKMAGETVVA DNGE DAGE XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPC+DVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVP RRFSMEQAFDWMDSHPEMY
Sbjct: 1 MVPAFDERWAKPGSTVVANDRDDADEAFARASPQSWMQEKLGMLQLRLEIDGDLTRFQPPQVFVVNIEDGAVGSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVADCKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNPNEGSGXXXXXXXRVAAGLSPSIFRATVIVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKIVHRDVKPENILLDDAGGFARLCDFGFAKHAPSVTPADLAGDPTTCYQAPERWQACGSPTAARAREKMAGETVVAGDNGEDDAGEXXX--XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCKDVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPGRRFSMEQAFDWMDSHPEMY 522
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A6H5JXI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI8_9PHAE) HSP 1 Score: 540 bits (1391), Expect = 1.020e-188 Identity = 278/292 (95.21%), Postives = 283/292 (96.92%), Query Frame = 1 Query: 109 MVPVFDERWAKPGSTRVANDRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGALGSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVK 984
MVPVFDERWAK GST VA+DRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGA+GSLLLTTTELFYSHQAIL SAGC PNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKS+DHAAT RTNMELITCL+LYHGLYSHCIDRRDNVD CHLVRLHDVLVDAPIFEERN NEGXXXXXX RVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRK+VHRDVK
Sbjct: 1 MVPVFDERWAKSGSTVVADDRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGAVGSLLLTTTELFYSHQAILNSAGCCPNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSNDHAATMRTNMELITCLKLYHGLYSHCIDRRDNVDRCHLVRLHDVLVDAPIFEERNANEGXXXXXX--RVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKIVHRDVK 290
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A6H5JUX6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX6_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 1.500e-138 Identity = 216/232 (93.10%), Postives = 220/232 (94.83%), Query Frame = 1 Query: 982 KPENILLDDAGGFARLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAREKMAGETVVAVDNGEADAGEDQDEGXXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPDRRFSMEQAFDWMDSHPEMY 1677
+PENILLDDAGGFARLCDFGFAKHAPSVTPADL GDPTTCYQAPERWQACRSPAAARAREKMA ETVVA + GE DAGE XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDV EADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALR LLDGVLHPVPDRRFSM+QAFDWMDSHPEM+
Sbjct: 9 QPENILLDDAGGFARLCDFGFAKHAPSVTPADLAGDPTTCYQAPERWQACRSPAAARAREKMAAETVVAGEKGEDDAGEXXX--XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVAEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRDLLDGVLHPVPDRRFSMQQAFDWMDSHPEMF 238
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A835YVB4_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB4_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.900e-27 Identity = 106/370 (28.65%), Postives = 149/370 (40.27%), Query Frame = 1 Query: 673 DNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILL------DDAGGFA------------RLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAREKMAGETVVAVDNGEADAGEDQDEGXXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAP---------CRDVGEADASS---------------LPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPDRRFSMEQAFDWM 1656
D+ L H++R+ +VL A +F + +P+ + A +V +WADGGD H V + G P A L + + L RDVKPEN LL G +A +L DFGFAK +T DL DPTTCYQ PERW A A + RE A + + E + L A D+FS G++ F ++ AIL R D G+ DA + LN+FQ A G +FGLL G G Q W +W YGL++PQ LR +LD +LHP P+ R+++ + ++
Sbjct: 323 DSAGLQHILRVREVLCRAQVFAGGESG----------------TPTKYFANALVLDWADGGDLHQFVNDRHAGTPRDALAVLLQASCNSITTL----FFDRDVKPENFLLMPPKEGPPGGRYAHSARPPLRGMCLKLSDFGFAKKLSGLTTEDLSDDPTTCYQPPERWSALEQRCAEKLREYRA--------------------------------------IERAPEDLQLLSAGDIFSLGISAFFTLAIEAILDRRGARFEGGVAVAIDDWGDDGDGDAQEEEEDPEGLLGKYTNRIHTLNLFQEAPGERLFGLLNWGPA-GCSQKLFWRHWAAYGLNVPQDLRRVLDCMLHPRPECRWTVGEVLQYI 633
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A2H5Z614_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5Z614_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 8.870e-13 Identity = 51/100 (51.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAKHA--PSVT-PADLVGDPTTCYQAPER 1119
+V EW DGGD L+RE +P + RL VL GL A+HR +VHRDVKP N+LLD G A+L DFG A+ A P++T P DL+G T Y APER
Sbjct: 87 LVMEWVDGGDLARLIRERAP-LPVDEAVRLALDVLNGLAAIHRAGIVHRDVKPANVLLDRHGR-AKLTDFGIARRADDPTLTGPVDLLG--TAPYVAPER 182
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A831TFB5_9CHLR (Non-specific serine/threonine protein kinase n=1 Tax=Thermorudis peleae TaxID=1382356 RepID=A0A831TFB5_9CHLR) HSP 1 Score: 75.5 bits (184), Expect = 1.120e-10 Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAKHAPSV---TPADLVGDPTTCYQAPER 1119
+V EW DG D L+RE +PA + R+ +LRGL A+HR +VHRDVKP+N+L+D AG A+L DFG A+ A ++G T Y APE+
Sbjct: 94 LVMEWVDGTDLKRLIREQAP-LPADEAVRIALDLLRGLAAIHRAGIVHRDVKPQNVLIDRAGR-AKLADFGIARTARDTGLTETGSVIG--TAAYMAPEQ 189
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A562W950_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Micromonospora sagamiensis TaxID=47875 RepID=A0A562W950_9ACTN) HSP 1 Score: 74.7 bits (182), Expect = 2.360e-10 Identity = 66/209 (31.58%), Postives = 87/209 (41.63%), Query Frame = 1 Query: 502 GGVGFIFEGLDMLDGSKVAVKFFHK--SDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGG--FARLCDFGFAKHAPSVTPADLVGDPTTCYQAPE 1116
G G ++ G + DG +VAVK + S+D A R E LRL H HLVR+HD++V+ + P+I V + DG D H + + G +P AD A L Q GL A+H LVHRDVKP N+L+ G A L DFG A+ +G P Y APE
Sbjct: 282 GASGEVWAGRRIADGDRVAVKVLRERLSEDERAVARFLREYRVLLRLRHP---------------HLVRVHDLVVEDGV------------------------PAI------VMDLVDGEDLHRVAQR--GPMPLADAAELLAQTAGGLAAVHAADLVHRDVKPANVLVTRRDGRQVALLSDFGIARAVAGAAHTQPIGTPA--YLAPE 441
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: UPI00082E1044 (serine/threonine protein kinase n=1 Tax=Microtetraspora malaysiensis TaxID=161358 RepID=UPI00082E1044) HSP 1 Score: 73.9 bits (180), Expect = 3.510e-10 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAK--HAPSVTPA-DLVGDPTTCYQAPE 1116
+V + GGD +L+RE G +P AD ARL +V L A H + +VHRD+KP N+L+D A G +RL DFG A+ H P +T ++G P Y APE
Sbjct: 89 LVMDLVQGGDLRALLRERGT-LPPADAARLMAEVADALAAAHAQGVVHRDIKPGNVLIDAATGQSRLTDFGVARIVHGPGLTQTTSVIGTPA--YLAPE 184
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: UPI000B18D2C2 (serine/threonine protein kinase n=1 Tax=Nonomuraea sp. SBT364 TaxID=1580530 RepID=UPI000B18D2C2) HSP 1 Score: 72.0 bits (175), Expect = 3.720e-10 Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAK--HAPSVTP-ADLVGDPTTCYQAPE 1116
+V ++ +GGD +LV E G PA + AR+ QV L A H +VHRDVKP NIL+D G +L DFG A+ H P +T A ++G PT Y APE
Sbjct: 86 LVMDFVEGGDLRTLVHERGTLSPA-EAARMVAQVAGALAAAHTMGVVHRDVKPGNILIDGGTGQPKLTDFGVARIVHGPGITQTASIIGTPT--YLAPE 181
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: UPI00193B9EC2 (serine/threonine protein kinase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193B9EC2) HSP 1 Score: 72.4 bits (176), Expect = 9.540e-10 Identity = 73/233 (31.33%), Postives = 98/233 (42.06%), Query Frame = 1 Query: 454 ISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHK--SDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFA---RLCDFGFAKHAPSV---TPADLVGDPTTCYQAPERWQA 1128
+ ERYR + + A GG+G ++ G + G VA+KF H + D + R +E RL H ID H V AP MV E+ G +L+RE GG +P L RQVL GL H + +VHRD+KP+NILL +A G R+ DFG AK +V T VG P+ Y APE+ +A
Sbjct: 1 MQERYRIL---QRLAAGGMGVVYRGERLELGRAVAIKFLHSWMAADESFQRRFQIEAQAMSRLSHPCCVPVID-------------HGVHEGAPF--------------------------------MVMEFVTGQTLRALLRE-GGPLPVKRALGLVRQVLAGLAHAHAQGIVHRDIKPDNILLTEAIGLGDQVRILDFGLAKLRDTVSGLTTGLAVGTPS--YMAPEQIRA 182 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1109.736.1 >prot_E-siliculosus-1a_F_contig1109.736.1 ID=prot_E-siliculosus-1a_F_contig1109.736.1|Name=mRNA_E-siliculosus-1a_F_contig1109.736.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=524bp MVPVFDERWAKPGSTRVANDRDDADEAFARASPQSWMQEKLAMLQLRLEIback to top mRNA from alignment at E-siliculosus-1a_F_contig1109:2193..5374+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1109.736.1 ID=mRNA_E-siliculosus-1a_F_contig1109.736.1|Name=mRNA_E-siliculosus-1a_F_contig1109.736.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3182bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1109:2193..5374+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1109:2193..5374+ >mRNA_E-siliculosus-1a_F_contig1109.736.1 ID=mRNA_E-siliculosus-1a_F_contig1109.736.1|Name=mRNA_E-siliculosus-1a_F_contig1109.736.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3144bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1109:2193..5374+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |