mRNA_E-siliculosus-1a_F_contig11080.734.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: B8CGQ2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CGQ2_THAPS) HSP 1 Score: 59.3 bits (142), Expect = 4.070e-9 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 1 Query: 7 ERPYHADRTTSRPLCEVKRRRARLVLRWGTTWEALVLFLFC 129 ERPYH+D T SR L EVK RARLVLRWGTT E+LVLF FC Sbjct: 520 ERPYHSDNTASRLLSEVKHCRARLVLRWGTTLESLVLF-FC 559
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: V4BHB9_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BHB9_LOTGI) HSP 1 Score: 52.8 bits (125), Expect = 7.780e-8 Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWEALVL 117 RPYH + T+SRP+ EVK+RRARLVL W T WE VL Sbjct: 56 RPYHVENTSSRPITEVKQRRARLVLGWVTAWEHRVL 91
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A816YMV4_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816YMV4_9BILA) HSP 1 Score: 50.8 bits (120), Expect = 1.750e-7 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 RPYH + T+SRP+ EVK+RRARLVL W T WE Sbjct: 1 RPYHVEYTSSRPITEVKQRRARLVLGWVTAWE 32
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A3S0ZIY3_ELYCH (Uncharacterized protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZIY3_ELYCH) HSP 1 Score: 50.8 bits (120), Expect = 5.420e-7 Identity = 24/36 (66.67%), Postives = 27/36 (75.00%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWEALVL 117 RPYH + T SRP+ EVK+RRA LVLRW T WE VL Sbjct: 65 RPYHVENTGSRPITEVKQRRAWLVLRWVTAWEHHVL 100
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A3S0Z3S7_ELYCH (Uncharacterized protein (Fragment) n=2 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0Z3S7_ELYCH) HSP 1 Score: 50.1 bits (118), Expect = 5.830e-7 Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 RPYH + T SRP+ EVK+RRA LVLRW T WE Sbjct: 1 RPYHVENTGSRPITEVKQRRAWLVLRWVTAWE 32
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A815TME6_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815TME6_ADIRI) HSP 1 Score: 51.6 bits (122), Expect = 1.970e-6 Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 1 Query: 4 QERPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 Q RPYH + T+SRP+ EVK+RRARLVL W T WE Sbjct: 243 QPRPYHVEYTSSRPITEVKQRRARLVLGWVTAWE 276
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A4C1YSQ9_EUMVA (Uncharacterized protein n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1YSQ9_EUMVA) HSP 1 Score: 49.3 bits (116), Expect = 2.460e-6 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 1 Query: 7 ERPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 +RPYHA+ T SRP+ EVK+RRAR VL W T WE Sbjct: 49 QRPYHAEYTGSRPITEVKQRRARSVLGWVTAWE 81
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A815RAB9_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815RAB9_ADIRI) HSP 1 Score: 50.8 bits (120), Expect = 3.990e-6 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 RPYH + T+SRP+ EVK+RRARLVL W T WE Sbjct: 1694 RPYHVEYTSSRPITEVKQRRARLVLGWVTAWE 1725
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A815F560_ADIRI (Hypothetical protein n=6 Tax=Adineta ricciae TaxID=249248 RepID=A0A815F560_ADIRI) HSP 1 Score: 50.8 bits (120), Expect = 3.990e-6 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 RPYH + T+SRP+ EVK+RRARLVL W T WE Sbjct: 821 RPYHVEYTSSRPITEVKQRRARLVLGWVTAWE 852
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Match: A0A815DD86_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815DD86_9BILA) HSP 1 Score: 50.8 bits (120), Expect = 3.990e-6 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 10 RPYHADRTTSRPLCEVKRRRARLVLRWGTTWE 105 RPYH + T+SRP+ EVK+RRARLVL W T WE Sbjct: 505 RPYHVEYTSSRPITEVKQRRARLVLGWVTAWE 536 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11080.734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 12 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11080.734.1 >prot_E-siliculosus-1a_F_contig11080.734.1 ID=prot_E-siliculosus-1a_F_contig11080.734.1|Name=mRNA_E-siliculosus-1a_F_contig11080.734.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=43bp HQERPYHADRTTSRPLCEVKRRRARLVLRWGTTWEALVLFLFCback to top mRNA from alignment at E-siliculosus-1a_F_contig11080:1..129+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11080.734.1 ID=mRNA_E-siliculosus-1a_F_contig11080.734.1|Name=mRNA_E-siliculosus-1a_F_contig11080.734.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=129bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11080:1..129+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11080:1..129+ >mRNA_E-siliculosus-1a_F_contig11080.734.1 ID=mRNA_E-siliculosus-1a_F_contig11080.734.1|Name=mRNA_E-siliculosus-1a_F_contig11080.734.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=258bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11080:1..129+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |