Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 819 |
| Model size | 819 |
| Exons | 2 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog | Ec-00_008340.1 |
| Ec32 ortholog description | Hypothetical protein |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927611.8932006-CDS-E-siliculosus-1a_F_contig1105:19586..20315 | 1622927611.8932006-CDS-E-siliculosus-1a_F_contig1105:19586..20315 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1105 19587..20315 + |
| 1696318609.2715697-CDS-E-siliculosus-1a_F_contig1105:19586..20315 | 1696318609.2715697-CDS-E-siliculosus-1a_F_contig1105:19586..20315 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1105 19587..20315 + |
| 1622927611.9036708-CDS-E-siliculosus-1a_F_contig1105:21498..21588 | 1622927611.9036708-CDS-E-siliculosus-1a_F_contig1105:21498..21588 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1105 21499..21588 + |
| 1696318609.283141-CDS-E-siliculosus-1a_F_contig1105:21498..21588 | 1696318609.283141-CDS-E-siliculosus-1a_F_contig1105:21498..21588 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1105 21499..21588 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1105.719.1 >prot_E-siliculosus-1a_F_contig1105.719.1 ID=prot_E-siliculosus-1a_F_contig1105.719.1|Name=mRNA_E-siliculosus-1a_F_contig1105.719.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=273bp
MKSPTTHQELRRLRFKAVAVVNADDIESPLHASQEEAYSHHVPESKNELP
SPVVGAENGTEFESPTSSPSPSPSLTVALPCGEDQTTQTRGRMFRRRRDN
GTFMQAVAEGGHDTVECSGHDRSSKGEIITIKDGLARGAVVEWSHGSTGS
FAQAPVQSLRDGKHVLEASTYDHRRGPADATRRVAAAGVAGHQGRQFGCG
DGGRDVPKQQSRCANGTGDGCAEEPQEEDEAELSLDLSDCSNEKLGSLLE
QGRRRGSGRAGPCPSWRSDLGA* back to topmRNA from alignment at E-siliculosus-1a_F_contig1105:19587..21588+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1105.719.1 ID=mRNA_E-siliculosus-1a_F_contig1105.719.1|Name=mRNA_E-siliculosus-1a_F_contig1105.719.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1105:19587..21588+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAATCACCGACAACACATCAGGAGTTGCGCAGGTTGCGCTTCAAAGC
GGTCGCCGTCGTCAATGCCGACGATATCGAATCGCCGCTTCATGCCTCCC
AAGAAGAGGCCTACAGCCACCATGTGCCAGAATCGAAGAATGAGCTACCG
TCTCCAGTGGTTGGTGCAGAAAATGGTACAGAATTCGAGTCACCAACATC
ATCACCATCACCATCACCATCGTTAACAGTTGCGCTGCCGTGTGGGGAAG
ATCAGACAACCCAAACACGAGGACGTATGTTTCGCCGAAGAAGAGACAAT
GGAACGTTCATGCAGGCTGTAGCGGAAGGGGGTCATGATACGGTGGAGTG
TAGCGGCCACGACCGTAGTAGCAAGGGAGAGATAATCACAATCAAAGACG
GCTTGGCGAGGGGCGCAGTGGTAGAATGGTCCCATGGGTCCACCGGATCA
TTCGCTCAAGCACCAGTTCAGAGTTTACGGGATGGCAAACACGTGCTAGA
GGCATCTACGTACGACCATCGACGCGGGCCGGCAGATGCTACAAGGAGGG
TGGCGGCTGCTGGTGTTGCCGGGCATCAGGGTCGGCAGTTTGGATGCGGA
GACGGTGGGAGAGATGTCCCGAAACAACAAAGTAGATGCGCTAACGGAAC
GGGGGATGGATGTGCGGAAGAACCCCAGGAGGAAGACGAGGCGGAACTGT
CCCTTGATCTCTCTGATTGCAGCAATGAGGTGGGAGGGCTTCACGTTTTT
CAGGAAAGCGAATAGATTTCTTGATCTCATGGCGGCTGGTATATACATAT
ATATGTATAGAGATCAAATGGTGCCCTTGTCGTTAATTTATTCCCCCAGG
AAATCGAGGGAAAATGTTGTTGTTGTCCTTGTTGTCTTTGTTGTCAGAAT
CTCTAAACTGTTGTTGTTTTGGTCTCAATCTTTAACTCAGTTCCGGTCTC
TGCTTAGCGCTTTCGAACATCCCGACCGGTCCCACCTGAGCGGGAGATTT
CGGTGGTCACAGGCCAACTACCCGAAAAGGGTACACACTTCGCAACTAAT
AACAGAAACCAAACAGGACCTACGTATAACATCATCACAAAACTTTGTGG
GGGGTTATTCGATTCACTCGTCGTCCAACGCGAGTTTTAGACAACGTGAA
GACGACGATCCACAATTCCAAACGGCGTGAACTGAACACGTGGACTGGCT
GGCCGAGCTTTGAGTACACAGAGAACGGGCAAAGCCATGGAACCCTTACA
TAACCGGGTCGGACAAATCGTCAGGAACGTTGTCGGCAATCGTTCCGAAC
CAACTTCCCCATCATCGCTTCTCAAGGATTGAATTTGGCTTTGATATAAC
AGCGTTCTGTTATGTGTTTCGAAAACCGATTTTCTCGGCAAACACATAGG
TACTGTAGTAATTAGCACCTCTGAGCGCTTGGGATAACCATGGTCTCCCC
AACCATGGACTGTTTGGGGTCAACGATGACGTTCCTCGTTGAGTCCTCTG
TCTTTGGAGTCAGGCAACACGGCAGTGGCGCTCTTCGCATGCTCACCAAA
CCCCTCGAGAGAGGGGCATGAATCGACTACAAACAAATTCTGTGTCACTT
ATTTACACGATTGTATTGGAGTTGACACAGGCCTCGTGTACCAACGTAGG
GGCTACCGAACATCGCATTTAGGAACCTCAATACCTACGATGGACAAATT
AAATATTTTCTCTGACCTTAATCTGAACAGCACTACTGTAGTAGTAGTTT
TGTCCGCGTGACAAACAAATCTGAGGGGGTATCCGAAGATTGATTTCGAT
TCTTTTCCCAGCATATTTTGCCTCCTCGACCGCCTGGTGACTCTCGTCGA
AATTTCATCACCATGTGGTACAATCGGTCTGTGCGATCACATCGAACATG
TAACGCATACAGAAACTGGGAAGCCTGCTGGAGCAGGGTCGGCGGCGTGG
AAGTGGCCGAGCGGGGCCATGTCCGTCATGGAGGTCAGATCTCGGCGCGT
AG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1105:19587..21588+ >mRNA_E-siliculosus-1a_F_contig1105.719.1 ID=mRNA_E-siliculosus-1a_F_contig1105.719.1|Name=mRNA_E-siliculosus-1a_F_contig1105.719.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1638bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1105:19587..21588+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAATCACCGACAACACATCAGGAGTTGCGCAGGTTGCGCTTCAAAGC
GGTCGCCGTCGTCAATGCCGACGATATCGAATCGCCGCTTCATGCCTCCC
AAGAAGAGGCCTACAGCCACCATGTGCCAGAATCGAAGAATGAGCTACCG
TCTCCAGTGGTTGGTGCAGAAAATGGTACAGAATTCGAGTCACCAACATC
ATCACCATCACCATCACCATCGTTAACAGTTGCGCTGCCGTGTGGGGAAG
ATCAGACAACCCAAACACGAGGACGTATGTTTCGCCGAAGAAGAGACAAT
GGAACGTTCATGCAGGCTGTAGCGGAAGGGGGTCATGATACGGTGGAGTG
TAGCGGCCACGACCGTAGTAGCAAGGGAGAGATAATCACAATCAAAGACG
GCTTGGCGAGGGGCGCAGTGGTAGAATGGTCCCATGGGTCCACCGGATCA
TTCGCTCAAGCACCAGTTCAGAGTTTACGGGATGGCAAACACGTGCTAGA
GGCATCTACGTACGACCATCGACGCGGGCCGGCAGATGCTACAAGGAGGG
TGGCGGCTGCTGGTGTTGCCGGGCATCAGGGTCGGCAGTTTGGATGCGGA
GACGGTGGGAGAGATGTCCCGAAACAACAAAGTAGATGCGCTAACGGAAC
GGGGGATGGATGTGCGGAAGAACCCCAGGAGGAAGACGAGGCGGAACTGT
CCCTTGATCTCTCTGATTGCAGCAATGAGATGAAATCACCGACAACACAT
CAGGAGTTGCGCAGGTTGCGCTTCAAAGCGGTCGCCGTCGTCAATGCCGA
CGATATCGAATCGCCGCTTCATGCCTCCCAAGAAGAGGCCTACAGCCACC
ATGTGCCAGAATCGAAGAATGAGCTACCGTCTCCAGTGGTTGGTGCAGAA
AATGGTACAGAATTCGAGTCACCAACATCATCACCATCACCATCACCATC
GTTAACAGTTGCGCTGCCGTGTGGGGAAGATCAGACAACCCAAACACGAG
GACGTATGTTTCGCCGAAGAAGAGACAATGGAACGTTCATGCAGGCTGTA
GCGGAAGGGGGTCATGATACGGTGGAGTGTAGCGGCCACGACCGTAGTAG
CAAGGGAGAGATAATCACAATCAAAGACGGCTTGGCGAGGGGCGCAGTGG
TAGAATGGTCCCATGGGTCCACCGGATCATTCGCTCAAGCACCAGTTCAG
AGTTTACGGGATGGCAAACACGTGCTAGAGGCATCTACGTACGACCATCG
ACGCGGGCCGGCAGATGCTACAAGGAGGGTGGCGGCTGCTGGTGTTGCCG
GGCATCAGGGTCGGCAGTTTGGATGCGGAGACGGTGGGAGAGATGTCCCG
AAACAACAAAGTAGATGCGCTAACGGAACGGGGGATGGATGTGCGGAAGA
ACCCCAGGAGGAAGACGAGGCGGAACTGTCCCTTGATCTCTCTGATTGCA
GCAATGAGAAACTGGGAAGCCTGCTGGAGCAGGGTCGGCGGCGTGGAAGT
GGCCGAGCGGGGCCATGTCCGTCATGGAGGTCAGATCTCGGCGCGTAGAA
ACTGGGAAGCCTGCTGGAGCAGGGTCGGCGGCGTGGAAGTGGCCGAGCGG
GGCCATGTCCGTCATGGAGGTCAGATCTCGGCGCGTAG back to top
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