mRNA_E-siliculosus-1a_F_contig1105.718.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1105.718.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1105.718.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1105:15544..19337+
coding sequence from alignment at E-siliculosus-1a_F_contig1105:15544..19337+

protein sequence of mRNA_E-siliculosus-1a_F_contig1105.718.1

>prot_E-siliculosus-1a_F_contig1105.718.1 ID=prot_E-siliculosus-1a_F_contig1105.718.1|Name=mRNA_E-siliculosus-1a_F_contig1105.718.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=237bp
MADVLFDRPTEPASAPRVRAFAEVAFKEIQSVVGSDASLLADKLAFAEYM
DKINESVLLGLHEPPPAASVINGGKHAFEQETQDSSSHQTAKPNYHEAPS
PLLHSFSINTTEADAVASPLEASSWRAVSSLRRHLRPVGTNSALGHSAIL
SPPSSPCSARVHKVRFDVGAEEKDLCTGKKIFPTSAALQNRNQGLGDDAQ
DQGLDGLERDLESTRESRAPSRDFDGPNFLQARRAE*

mRNA from alignment at E-siliculosus-1a_F_contig1105:15544..19337+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1105.718.1 ID=mRNA_E-siliculosus-1a_F_contig1105.718.1|Name=mRNA_E-siliculosus-1a_F_contig1105.718.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3794bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1105:15544..19337+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCTGATGTGTTGTTCGACCGACCCACCGAGCCGGCTTCAGGTGTGTT
CCAGCCCAGTCCAGCCCAGTAGATCTGTGCATCTGTGTTTGGCTTTGGAA
TGAGTACGGGGAGGCTCGTACAGACTACATGCACCTCGACAGCAGTCTAC
ACAGTGAAACTACAATTGCCAGAAATAGACTACGTACAAAATGTAGCATC
GTGTACAAACCACACATTCAACATCGCACACACATGAAATGGGAACATTG
AAAACCTTGAGGAGAGGAGAGATACTTTCCCACCGGCAAAGGGTCTCCGA
GACCCGCATACCGTAATTGTGCGTGTTATCGCACCCCCGTGTCAACGTTT
TTCTATAAATAGCGCATTTCTCCACGACCAGGGAGGTGTCACCTCCGAAA
AGGGTGGGTTTGGAAACATCTCGTCGAGGGCTTTCCGGAGAGGTATCAGT
TGGTGTTCGCACCCTCCTAGTGGTGGAGAAATACGCTAGCTATTGAATAA
CGCTAACACGGGGGTACGATAACACGCACAATACGGTAGACTATTATTAT
TGCTCGATCCAAAAACAAATCAAATGTAGAGAACGCCTTCGCAATCCCTA
TTTGCCTATTACTGAGACATGTCTGTTTGTGAACCGCAACTATGCAACTC
CAGCGTCTTCCCCCCATTGTTCCAAGTGAAACACCAGTCCTCTCGACATT
CCGACGAGGGTACGTCAGAACCGTACCGTTCGGCATTACTCGCGTGTAAG
TCAAACTTCTAGGGGAGTTGCAGGGAGGGTATTGTCAGCACAGCCAATCA
GTCTTGGGGGGTCGTTTCTCTAGACTTCCCCCTTAACGCAAAGCGAATTT
CAACTCTGTAAATGGTAATGTATTTACATAGTTTTGTGTAATACCCTGGC
ATGGTGGCGTAGAGGCTGTGTCGTCCACGTTAGTCTAGGTGATGAAACGT
GCGAGAGGGCACATGTAGTCTGGAAGACGAGAGAGAGTCCTTCCAAGATC
TCAAGAAGATGTTGAGATATTGGAACGCTGGCGCTTATGCCCAACACAAT
CCGGAAGGATCACACGACAGAGTGGGCAGCTACTCGGCTAGCAAGCAGAG
AATCCCACGGGGGTGATTCCTCCGCATACACGTACGATCTACGATATACA
AGCCCTACTGAACATTGACTCAATCTGGCGATGTGCTAACATTTCCATAA
CACTCCCTTTCAATGAAAGTCGCTCTGAATTGTACCGAACTATTGATGAT
TAAGTCAAGCAAGTAATTCGTTTCCTGCGTGACTCAATTCGTCTCATGCA
TTTCAACCACTAATATACCAGGTGATATTTCATGTTTTGCACGTGCTACA
ATATATTCGTGGACTTGCAGAGATACCTGCTATTTTTTCCTGCATGTACC
AAAGTACCATGACTTTTCAATTTTCGTGGCTCGTTCAACCAGCGATGGTG
CGAGGCCGAATGGCGACTACCGAAAGAGTACGCTGATTCACACAAACAGA
ACAGATTAAAAAACACTTTGTACCAAACACACAAACAATATATATCACGG
TTGCTTGAACTTGTTGATGATGAAGTCGTACACGTTGAAGTTGTTGATGA
TGTCCAGTAGATGTTTGAGCCGATGCTTGTTTAAGTGTTTCGAGCTGATG
TCTGCAGGGTTGCTGTCCGTCGGGATGTAGTGGATGGAGATCCTTCCTTC
TGATAGGAGCTCTCGGATGGTACCAGACGGAAGGATCTCCATCCACTACA
TCCCGACGGACAGCAACCCTGCAGACATCAGCTCGAAACACTTAAACAAG
CATCGGCTCAAACATCTGCTGGACATCGTCAACAGTTTCAACGCCAACGA
CTTCAGCATCAACAAGTTCAAGTGATCGTGTTGGCGTTTGTGTGTTTGTT
ACGAAGCGTCATTGAATCTGTTCAGTTTATGTGAATCAGCGTACCTTTCG
ATAGTCGACATTCGGCCTCGCACCATCACTACACTGGTTGCGAGCCATGT
AGGATTGAACGAATTCGTACTTTGATTTATGCTGGAAACATAGCAGGTAC
TCTTTGCAAGCGCACGAATATATTGTAGCAGGTGGAAAACACGAAATCTT
ACTTGGTACATTAGTGGATGGAACGCATGAAACAAATTGAGTTACGCAGG
AAACGAAAATATTACTTGCTTGATTTAATCTCAATAGTTCGGCAATTCAG
AGCGGCTTTCATTGAGGGGGAGTGCTATGGAAATGTTTAACACGTAGCCA
GTATGAGTCAATGTTCAGTAGCACTGCTCTGGTATGTCGTAGATCTCATG
TGTGTCGGTTCGAATGTAACGTACGTATGCGGAGGAATCACTCCCGTGGG
ATTCTCGGCTTGCTAGCCGAGTAGCTGACTCTCTCGTGTGATGCTTACGG
ATTGTGTTGGCCACTTTCGCGCCAGTGTTCCACTATCTCAACATCTTCAC
ATCTTGGAAGGACTCTTCCAGGCTTCCCTCTTGCACGTGTCATCACCGCG
ACCAACGTCGACGACACAGCCTCTACGCCACCGTGCCAGGGTATTACACA
ATATCCGTGATAGGCTATGAGACTCGTTTGTGAAGGTGTACAGCATATCC
ATTACGCTACAAGTCGGCGTCCTCTCGTTTGCTCTCACATACGTTTTCTC
AAGGGGCTTCCTCAAAGACGTGCGCCTCTCGTATTGAATGACGTTCTCTT
GTCCCCTCCCCGTTTCAGCCCCGCGTGTGAGGGCGTTCGCTGAGGTCGCT
TTCAAAGAGATCCAATCGGTGGTAGGCAGCGACGCAAGTCTGTTGGCAGA
CAAGCTTGCGTTTGCCGAGTACATGGACAAGATTAACGAAAGGTATGCAT
AGGTCGTACATAGTGAGTAGAATTCATGTGAGAGTGGTAAGCCGACGCCA
GACATACCGATGACATTTCAAAATAGTTCGAGCCCACAGCGCTCATTCCC
GCCATGCATTCTCACTCTATTCGCGTTTGACAAGCGTATGTCCAGTATGG
TGAAACGCTCTTGCCCAGGGAGAAATATAACGACAAGAAACAGATCTTGG
AGACATCATCACATTTTTCCAATGTCCGACGTGTGTAGAATGAATAAAAA
CCAAACCCTCGTCTCTGTTCTGTCACGGCAGGACGACTTCCATCCTCCCA
TGTCTGCGTTCATCAGTTCTAGAAGGTCTCGTAGGCCGGCGTCGGCAATG
GCTTCTTTTCTGATTCATTTCGTTCTCACTCGTCCACTCGCGCCCTTCAG
CGTTCTTTTGGGGCTGCACGAGCCCCCGCCGGCCGCATCCGTCATCAATG
GTGGCAAACATGCGTTCGAGCAAGAGACGCAAGACAGTTCTTCCCATCAG
ACAGCGAAACCCAACTACCACGAGGCACCATCACCACTTCTTCATTCTTT
TAGCATCAACACCACCGAGGCGGACGCAGTTGCAAGCCCTCTCGAGGCAT
CATCGTGGAGGGCTGTGTCTTCTCTGCGGCGCCACCTCCGCCCAGTCGGC
ACTAATTCCGCGCTAGGACATTCGGCGATACTATCACCACCATCCTCCCC
GTGCAGCGCTAGAGTACACAAGGTGCGGTTCGACGTGGGTGCCGAGGAGA
AGGATCTCTGTACTGGCAAAAAGATATTCCCCACATCGGCGGCTCTGCAG
AATCGCAACCAAGGGCTTGGTGACGACGCTCAGGACCAGGGACTGGATGG
CCTGGAAAGAGACCTTGAATCCACCAGGGAGTCACGCGCACCGAGTCGTG
ACTTTGACGGACCGAACTTCCTGCAGGCACGTCGGGCAGAATAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1105:15544..19337+

>mRNA_E-siliculosus-1a_F_contig1105.718.1 ID=mRNA_E-siliculosus-1a_F_contig1105.718.1|Name=mRNA_E-siliculosus-1a_F_contig1105.718.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1105:15544..19337+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCTGATGTGTTGTTCGACCGACCCACCGAGCCGGCTTCAGATGGCTG
ATGTGTTGTTCGACCGACCCACCGAGCCGGCTTCAGCCCCGCGTGTGAGG
GCGTTCGCTGAGGTCGCTTTCAAAGAGATCCAATCGGTGGTAGGCAGCGA
CGCAAGTCTGTTGGCAGACAAGCTTGCGTTTGCCGAGTACATGGACAAGA
TTAACGAAAGCCCCGCGTGTGAGGGCGTTCGCTGAGGTCGCTTTCAAAGA
GATCCAATCGGTGGTAGGCAGCGACGCAAGTCTGTTGGCAGACAAGCTTG
CGTTTGCCGAGTACATGGACAAGATTAACGAAAGCGTTCTTTTGGGGCTG
CACGAGCCCCCGCCGGCCGCATCCGTCATCAATGGTGGCAAACATGCGTT
CGAGCAAGAGACGCAAGACAGTTCTTCCCATCAGACAGCGAAACCCAACT
ACCACGAGGCACCATCACCACTTCTTCATTCTTTTAGCATCAACACCACC
GAGGCGGACGCAGTTGCAAGCCCTCTCGAGGCATCATCGTGGAGGGCTGT
GTCTTCTCTGCGGCGCCACCTCCGCCCAGTCGGCACTAATTCCGCGCTAG
GACATTCGGCGATACTATCACCACCATCCTCCCCGTGCAGCGCTAGAGTA
CACAAGGTGCGGTTCGACGTGGGTGCCGAGGAGAAGGATCTCTGTACTGG
CAAAAAGATATTCCCCACATCGGCGGCTCTGCAGAATCGCAACCAAGGGC
TTGGTGACGACGCTCAGGACCAGGGACTGGATGGCCTGGAAAGAGACCTT
GAATCCACCAGGGAGTCACGCGCACCGAGTCGTGACTTTGACGGACCGAA
CTTCCTGCAGGCACGTCGGGCAGAATAGCGTTCTTTTGGGGCTGCACGAG
CCCCCGCCGGCCGCATCCGTCATCAATGGTGGCAAACATGCGTTCGAGCA
AGAGACGCAAGACAGTTCTTCCCATCAGACAGCGAAACCCAACTACCACG
AGGCACCATCACCACTTCTTCATTCTTTTAGCATCAACACCACCGAGGCG
GACGCAGTTGCAAGCCCTCTCGAGGCATCATCGTGGAGGGCTGTGTCTTC
TCTGCGGCGCCACCTCCGCCCAGTCGGCACTAATTCCGCGCTAGGACATT
CGGCGATACTATCACCACCATCCTCCCCGTGCAGCGCTAGAGTACACAAG
GTGCGGTTCGACGTGGGTGCCGAGGAGAAGGATCTCTGTACTGGCAAAAA
GATATTCCCCACATCGGCGGCTCTGCAGAATCGCAACCAAGGGCTTGGTG
ACGACGCTCAGGACCAGGGACTGGATGGCCTGGAAAGAGACCTTGAATCC
ACCAGGGAGTCACGCGCACCGAGTCGTGACTTTGACGGACCGAACTTCCT
GCAGGCACGTCGGGCAGAATAG

mRNA_E-siliculosus-1a_F_contig1105.718.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

ZOOM

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POSITION

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