mRNA_E-siliculosus-1a_F_contig11048.716.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A6H5KYV7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV7_9PHAE) HSP 1 Score: 298 bits (764), Expect = 2.990e-101 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1 Query: 1 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNE+ Sbjct: 35 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEM 182
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: D8LRH1_ECTSI (ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH1_ECTSI) HSP 1 Score: 298 bits (764), Expect = 2.420e-100 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1 Query: 1 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNE+ Sbjct: 35 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEM 182
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A835ZI02_9STRA (Protein kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI02_9STRA) HSP 1 Score: 227 bits (579), Expect = 2.850e-72 Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 1 Query: 4 LLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 +L SLEHK HVVMVFESMQMNLRETLKKFGR+ GIN+ AV+ Y QL AL+H+A+R ++HADIKPDNILV QGFG LKLADFGSAF TD D DPTPYLVSRWYRAPEI++GLEYD+AID WSVA TL+ELY G+ + PG +NN++ Sbjct: 36 MLASLEHKNHVVMVFESMQMNLRETLKKFGRRVGINVRAVRTYAHQLFVALRHLAARRVIHADIKPDNILVSQGFGCLKLADFGSAFHETDSDLDPTPYLVSRWYRAPEIILGLEYDRAIDTWSVAATLYELYMGASLFPGRDNNDM 182
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A7S2WEY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEY6_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.000e-63 Identity = 98/147 (66.67%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 4 LLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 LL + EHK H +VFES MNLRETLKKFG+ GINI +V+ Y +QL AL+H+AS +VHADIKPDNILV + F +LKL DFGSAF+ TDPDNDPTPYLVSR+YRAPEI +GLEYD+ IDLWSV V LFEL+ GS + PG +NN + Sbjct: 7 LLTNFEHKSHTALVFESYAMNLRETLKKFGKNVGINIKSVRIYARQLFIALRHIASLRVVHADIKPDNILVSEDFRTLKLCDFGSAFKETDPDNDPTPYLVSRFYRAPEITLGLEYDRRIDLWSVGVCLFELFTGSVMFPGRDNNHM 153
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: K8YZQ6_NANGC (Protein kinase domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YZQ6_NANGC) HSP 1 Score: 206 bits (523), Expect = 3.610e-62 Identity = 97/148 (65.54%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 1 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 RLL LEH+QHVVMVFES++MNLRETL+KFG+ G+NI AV+ Y KQLL AL+H+ +VHADIKPDNILV +GFG LKL DFGSAFR PDN PTPYLVSR+YRAPE+++G EY + +DLWSV L+EL+ G LPG +NNE+ Sbjct: 165 RLLAHLEHRQHVVMVFESLEMNLRETLRKFGKHVGLNISAVRTYAKQLLFALRHIEKLGIVHADIKPDNILVSEGFGQLKLCDFGSAFREDAPDNAPTPYLVSRFYRAPEVILGFEYGRGVDLWSVGCCLYELFTGRVTLPGSSNNEM 312
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A4D9DES0_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DES0_9STRA) HSP 1 Score: 208 bits (530), Expect = 7.790e-61 Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = 1 Query: 1 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 RLL LEH+QHVVMVFES+QMNLRETL+KFG+ G+NI AV+ Y KQLL AL+H+ +VHADIKPDNILV +GFG LKL DFGSAFR PDN+PTPYLVSR+YRAPE+++G EY + +DLWSV L+EL+ G LPG +NNE+ Sbjct: 455 RLLAHLEHRQHVVMVFESLQMNLRETLRKFGKHVGLNISAVRTYAKQLLFALRHIEKLGIVHADIKPDNILVSEGFGQLKLCDFGSAFREDAPDNEPTPYLVSRFYRAPEVILGFEYGRGVDLWSVGCCLYELFTGRVTLPGSSNNEM 602
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A7S2RWC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWC8_9STRA) HSP 1 Score: 203 bits (517), Expect = 7.810e-60 Identity = 98/147 (66.67%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 4 LLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 LL + EHK H +VFES MNLRETLKKFG+ GINI +V+ Y +QL AL+H+AS +VHADIKPDNILV + F +LKL DFGSAF+ TDPDNDPTPYLVSR+YRAPEI +GLEYD+ IDLWSV V LFEL+ GS + PG +NN + Sbjct: 332 LLTNFEHKSHTALVFESYAMNLRETLKKFGKNVGINIKSVRIYARQLFIALRHIASLRVVHADIKPDNILVSEDFRTLKLCDFGSAFKETDPDNDPTPYLVSRFYRAPEITLGLEYDRRIDLWSVGVCLFELFTGSVMFPGRDNNHM 478
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A7S0B2B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B2B6_9STRA) HSP 1 Score: 184 bits (467), Expect = 6.310e-56 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 1 Query: 16 LEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 LE++ H ++FE M NLRETL KFG+ GIN+ AV+ Y KQL AL H+A ++VHAD+KPDNILV F ++KL DFGSAF TD DN PTPYLVSR+YRAPEI++GL+Y +A+DLWS+AVTL EL+ GS + PG NN++ Sbjct: 5 LEYRNHTTLLFEHMPYNLRETLSKFGKNVGINLTAVRSYSKQLFRALAHLAKHSIVHADLKPDNILVSADFSTVKLCDFGSAFFETDSDNVPTPYLVSRFYRAPEIILGLDYTRAVDLWSIAVTLAELFTGSVLFPGRTNNDM 147
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A7S2D2A2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2A2_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.090e-55 Identity = 91/146 (62.33%), Postives = 115/146 (78.77%), Query Frame = 1 Query: 1 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNN 438 +LL +H+ H MVFESMQMNLRETLKKFG+ GINI +V+ Y KQL+ ALKH+AS +VHADIKPDNILV + +LK+ DFGSAFR T PDNDPTPY+ SR+YRAPEI +GLEY++ ID+WS+ V LFEL+ G + G+++N Sbjct: 405 QLLSHFDHRNHTSMVFESMQMNLRETLKKFGKNVGINIKSVKTYAKQLMIALKHIASLRIVHADIKPDNILVSEDHRTLKICDFGSAFRETAPDNDPTPYIQSRFYRAPEITLGLEYNRQIDIWSIGVCLFELFTGKVMFQGIDSN 550
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Match: A0A812Q5N5_SYMMI (Prpf4b protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Q5N5_SYMMI) HSP 1 Score: 184 bits (467), Expect = 4.700e-54 Identity = 88/148 (59.46%), Postives = 112/148 (75.68%), Query Frame = 1 Query: 1 RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAALKHMASRNLVHADIKPDNILVDQGFGSLKLADFGSAFRITDPDNDPTPYLVSRWYRAPEIVMGLEYDKAIDLWSVAVTLFELYKGSPVLPGVNNNEV 444 R+L E + H+V+ FE M MNLRE LKKFG+ GIN+ AV+ YGKQL L+H+A +VHADIK DNI+V +KL DFGSAF TDPDN PTPYLVSR+YRAPEI++GL YD+ ID+WSVAV+L+EL+ G ++PG +NNE+ Sbjct: 148 RMLGQTEFRSHIVIAFEPMSMNLREALKKFGKNVGINVTAVRMYGKQLFIGLRHLADLRIVHADIKLDNIVVSGDLKHVKLCDFGSAFLETDPDNVPTPYLVSRFYRAPEIILGLPYDRQIDIWSVAVSLYELFTGHVMVPGRSNNEM 295 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11048.716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11048.716.1 >prot_E-siliculosus-1a_F_contig11048.716.1 ID=prot_E-siliculosus-1a_F_contig11048.716.1|Name=mRNA_E-siliculosus-1a_F_contig11048.716.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=148bp RLLCSLEHKQHVVMVFESMQMNLRETLKKFGRKTGINIHAVQKYGKQLLAback to top mRNA from alignment at E-siliculosus-1a_F_contig11048:719..1988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11048.716.1 ID=mRNA_E-siliculosus-1a_F_contig11048.716.1|Name=mRNA_E-siliculosus-1a_F_contig11048.716.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1270bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11048:719..1988- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11048:719..1988- >mRNA_E-siliculosus-1a_F_contig11048.716.1 ID=mRNA_E-siliculosus-1a_F_contig11048.716.1|Name=mRNA_E-siliculosus-1a_F_contig11048.716.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=888bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11048:719..1988- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |