mRNA_E-siliculosus-1a_F_contig1104.713.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1104.713.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1104.713.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: D8LNL3_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL3_ECTSI)

HSP 1 Score: 848 bits (2190), Expect = 1.070e-302
Identity = 430/461 (93.28%), Postives = 440/461 (95.44%), Query Frame = 1

Query:  388 MMPLMGSIPCWALRMLAVTAVVCTIALGEVHNLGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAGRWGTYQGGRLIEASNTTDITEFKERMALVPLRVVDADALTGLARRSEAVFVLSANEDADPSTVAPGVLLAATLSQHDATFCTTSPEVLASLGLGVSGVSPALVKVVVGQGGRLLQPAVYKTERGNQGVNHDSATVSVATASSWSVLSWVERERFGLVSDLSPENFMRLGSLGRLMVLGVFDPKHEATRSFHKVFGDVASDMGVRHSERLMFGTVNRVKMPGFMETFNVYEGHPRVIVMDIASDEFYTVENMRMEVGEMEAFLIDVLAGFIPARVPSTNSARYAMRVWWLVQKGGAWSFLLLIPVVALVWVFCDTPQREEARAALREARKAERDEALRRKDQ 1770
            MMPLM SIPCWALR+LAV AVVCTIALG VHNLGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRL+PVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAK+PDLRFVRAGRWGTYQGGRLIE     DI EFKERMALVPLR VDADALTGLAR SEAVFVLSANEDADPSTVAPGVLLAATLSQH+ATFCTTSPEVLASLGLGVSGVSPALVKVV GQGGRLLQPA YKTERG QGVN DSATVSVA ASSWSVLSWVERERFGLVSDLSP+NFMRLGSLGRLMVLGVFDPKHEATRSF KVFGDVASDMGVRHSERLMFGTVNRV MPGFMETFNVYEGHP+VIVMDIASDEFYT+ENMRMEVGEMEAFLIDVLAGFIPARVPSTNSARYAM++WWLVQKGGAWSFLLLIPVVALVWVFCDTPQREEARAALRE RK ERD ALRRK+Q
Sbjct:    1 MMPLMASIPCWALRLLAVIAVVCTIALGGVHNLGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLNPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKLPDLRFVRAGRWGTYQGGRLIE-----DIKEFKERMALVPLRFVDADALTGLARSSEAVFVLSANEDADPSTVAPGVLLAATLSQHEATFCTTSPEVLASLGLGVSGVSPALVKVVAGQGGRLLQPAAYKTERGTQGVNDDSATVSVAAASSWSVLSWVERERFGLVSDLSPDNFMRLGSLGRLMVLGVFDPKHEATRSFRKVFGDVASDMGVRHSERLMFGTVNRVTMPGFMETFNVYEGHPQVIVMDIASDEFYTLENMRMEVGEMEAFLIDVLAGFIPARVPSTNSARYAMKIWWLVQKGGAWSFLLLIPVVALVWVFCDTPQREEARAALREVRKTERDGALRRKNQ 456

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A6H5K460_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K460_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.700e-30
Identity = 63/70 (90.00%), Postives = 65/70 (92.86%), Query Frame = 1

Query: 1039 VSPALVKVVVGQGGRLLQPAVYKTERGNQGVNHDSATVSVATASSWSVLSWVERERFGLVSDLSPENFMR 1248
            VSPALVKVV GQGGRLLQPAVYKTERG +G N DSATVSVA ASSWSVLSWVERERFGLVSDLSP+NFMR
Sbjct:   21 VSPALVKVVAGQGGRLLQPAVYKTERGTEGANDDSATVSVAAASSWSVLSWVERERFGLVSDLSPDNFMR 90

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A349H0L1_9BACT (Thioredoxin n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A349H0L1_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 3.080e-6
Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 1

Query:  475 VHNLGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAGRWGTYQGGRLIEAS 789
            + ++ D+++D  V  L     +LVDF+   C  C+ ++PVLD L AE   +        FK+AKVD++KNP L   FG+  IP L  ++ G       G L +A+
Sbjct:    6 IVHITDSNWDSEV--LKSAVPVLVDFWAEWCGPCRAIAPVLDELAAELAGK--------FKIAKVDVDKNPHLAGNFGVRSIPTLLVIKGGTVQEQMVGALSKAT 100

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A354C2F0_9DELT (Thioredoxin n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A354C2F0_9DELT)

HSP 1 Score: 55.1 bits (131), Expect = 1.460e-5
Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = 1

Query:  481 NLGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAG 747
            +L D++FD+ V  +  +  +LVDF+ P C  C+ + PV++ L A +        K   K+AKV+I++NP+  TV+G+  IP L   + G
Sbjct:    9 HLTDSNFDEEV--VKSEKPVLVDFWAPWCGPCRAIGPVVEELAAAY--------KDRVKVAKVNIDENPKTATVYGVMSIPTLILFKGG 87

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A6N7G068_9ACTN (Thioredoxin n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7G068_9ACTN)

HSP 1 Score: 55.1 bits (131), Expect = 1.460e-5
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 1

Query:  538 LLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAG 747
            +LVDF+   C  CQR+SP LD L A+WE           K+ KVD+E+NP +    GI  +P L     G
Sbjct:   23 VLVDFFADWCPSCQRISPTLDELAADWEGR--------LKVVKVDVERNPAMTKAHGIQSMPTLVLFEGG 84

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A7V5SII0_9BACT (Thioredoxin n=1 Tax=Chlorobi bacterium TaxID=2268192 RepID=A0A7V5SII0_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.820e-5
Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 1

Query:  535 LLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAG 747
            ++LVDF+   C  C+ ++PV++ +  E+       ++R  K+AKVD+++NPR+   +GI  IP L F RAG
Sbjct:   21 VVLVDFWAIWCGPCRMIAPVVEEIAREY-------AERGVKVAKVDVDRNPRIAMQYGIRAIPSLLFFRAG 84

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A5A7RS27_9ARCH (Thioredoxin n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A5A7RS27_9ARCH)

HSP 1 Score: 54.3 bits (129), Expect = 2.280e-5
Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 1

Query:  484 LGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAG 747
            L  N+F DFV+      ++LVDF+ P C  C  ++P+++ LE    KE PD      + AKV++++N  + ++FGI  IP L   + G
Sbjct:    5 LTTNNFRDFVS---RNDIVLVDFWAPWCSPCLLIAPIIEELE----KEMPD-----VRFAKVNVDENQEIASMFGIMSIPTLMIFKGG 80

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A2H5Y105_9BACT (Thioredoxin n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5Y105_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 6.290e-5
Identity = 30/88 (34.09%), Postives = 48/88 (54.55%), Query Frame = 1

Query:  484 LGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAG 747
            + D  F   V   P   ++LVDF+   C  C+ ++PV++ +  E+       + R  K+AKVD+++NPR+   +GI  IP L F R G
Sbjct:    6 VSDQTFAQEVLQYP--GIVLVDFWAVWCGPCRVIAPVVEEIAREY-------ADRGVKVAKVDVDRNPRVAMQYGIRAIPSLLFFRGG 84

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BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Match: A0A7V5VW80_9BACT (Thioredoxin n=1 Tax=Chlorobi bacterium TaxID=2268192 RepID=A0A7V5VW80_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 8.780e-5
Identity = 29/88 (32.95%), Postives = 48/88 (54.55%), Query Frame = 1

Query:  484 LGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKIPDLRFVRAG 747
            + D  F   V   P   ++LVDF+   C  C+ ++P+++ +  E+       + R  K+AKVD+++NPR+   +GI  IP L F R G
Sbjct:    7 VSDQTFAQEVLSYP--GVVLVDFWAVWCGPCRMIAPIVEEIAREY-------ASRGVKVAKVDVDRNPRVAMQYGIRAIPSLLFFRNG 85

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1104.713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9


Match Name	E-value	Identity	Description
D8LNL3_ECTSI	1.070e-302	93.28	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5K460_9PHAE	1.700e-30	90.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A349H0L1_9BACT	3.080e-6	34.29	Thioredoxin n=1 Tax=Verrucomicrobia bacterium TaxI...	[more]
A0A354C2F0_9DELT	1.460e-5	34.83	Thioredoxin n=1 Tax=Syntrophaceae bacterium TaxID=...	[more]
A0A6N7G068_9ACTN	1.460e-5	40.00	Thioredoxin n=1 Tax=Acidimicrobiia bacterium TaxID...	[more]
A0A7V5SII0_9BACT	1.820e-5	38.03	Thioredoxin n=1 Tax=Chlorobi bacterium TaxID=22681...	[more]
A0A5A7RS27_9ARCH	2.280e-5	35.23	Thioredoxin n=1 Tax=Thermoplasmata archaeon TaxID=...	[more]
A0A2H5Y105_9BACT	6.290e-5	34.09	Thioredoxin n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5Y...	[more]
A0A7V5VW80_9BACT	8.780e-5	32.95	Thioredoxin n=1 Tax=Chlorobi bacterium TaxID=22681...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1104	contig	E-siliculosus-1a_F_contig1104:7512..15600 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1386
Model size	2629
Exons	10
Ec32 ortholog	Ec-08_006690.1
Ec32 ortholog description	Thioredoxin-like fold
Hectar predicted targeting category	signal peptide
BRITE	ko00000,ko00001,ko01000,ko03110,ko04131
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	CO
EC	5.3.4.1
EggNOG OGs	COG0526@1,KOG4277@2759
EggNOG free text desc.	peptidyl-cysteine oxidation
GOs	GO:0002576,GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006457,GO:0006464,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0008150,GO:0008152,GO:0009986,GO:0009987,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0016192,GO:0016491,GO:0016667,GO:0016670,GO:0016853,GO:0016860,GO:0016864,GO:0016972,GO:0018158,GO:0018171,GO:0018193,GO:0018198,GO:0019538,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031091,GO:0031092,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0033554,GO:0034976,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055114,GO:0071704,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:0099503,GO:0140096,GO:1901564
KEGG Pathway	ko04141,map04141
KEGG ko	ko:K09585,ko:K13996
Preferred name	TMX3
Seed eggNOG ortholog	2880.D8LNL3
Seed ortholog evalue	2.8e-244
Seed ortholog score	850.9
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1104.713.1	prot_E-siliculosus-1a_F_contig1104.713.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1104 7899..14744 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927611.1536784-UTR-E-siliculosus-1a_F_contig1104:7511..7898	1622927611.1536784-UTR-E-siliculosus-1a_F_contig1104:7511..7898	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1104 7512..7898 +
1696318608.8559124-UTR-E-siliculosus-1a_F_contig1104:7511..7898	1696318608.8559124-UTR-E-siliculosus-1a_F_contig1104:7511..7898	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1104 7512..7898 +
1622927611.3621824-UTR-E-siliculosus-1a_F_contig1104:14744..15600	1622927611.3621824-UTR-E-siliculosus-1a_F_contig1104:14744..15600	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1104 14745..15600 +
1696318608.9604955-UTR-E-siliculosus-1a_F_contig1104:14744..15600	1696318608.9604955-UTR-E-siliculosus-1a_F_contig1104:14744..15600	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1104 14745..15600 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1104:7512..15600+
coding sequence from alignment at E-siliculosus-1a_F_contig1104:7512..15600+

protein sequence of mRNA_E-siliculosus-1a_F_contig1104.713.1

>prot_E-siliculosus-1a_F_contig1104.713.1 ID=prot_E-siliculosus-1a_F_contig1104.713.1|Name=mRNA_E-siliculosus-1a_F_contig1104.713.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=462bp
MMPLMGSIPCWALRMLAVTAVVCTIALGEVHNLGDNDFDDFVADLPEQAL
LLVDFYKPGCRHCQRLSPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNP
RLKTVFGIAKIPDLRFVRAGRWGTYQGGRLIEASNTTDITEFKERMALVP
LRVVDADALTGLARRSEAVFVLSANEDADPSTVAPGVLLAATLSQHDATF
CTTSPEVLASLGLGVSGVSPALVKVVVGQGGRLLQPAVYKTERGNQGVNH
DSATVSVATASSWSVLSWVERERFGLVSDLSPENFMRLGSLGRLMVLGVF
DPKHEATRSFHKVFGDVASDMGVRHSERLMFGTVNRVKMPGFMETFNVYE
GHPRVIVMDIASDEFYTVENMRMEVGEMEAFLIDVLAGFIPARVPSTNSA
RYAMRVWWLVQKGGAWSFLLLIPVVALVWVFCDTPQREEARAALREARKA
ERDEALRRKDQ*

mRNA from alignment at E-siliculosus-1a_F_contig1104:7512..15600+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1104.713.1 ID=mRNA_E-siliculosus-1a_F_contig1104.713.1|Name=mRNA_E-siliculosus-1a_F_contig1104.713.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8089bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1104:7512..15600+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTTCACAGAGGCTTTTTGTGCGGTGTGTTTGAGACTTGCTTCAGAGTGC
GGTAGCAGAGGGCAGGCAGACACAGCAGGCAGCAGGCAGACACAACACCG
AGTGTAGGAACAGAAAGATAGAGTAGTGTCGGTGTGTTAGCAGTACCGCT
GACACGAATCCCAACATTAGCGCACATGCGATAGATTCAACTTGGAACAC
CCGTTATTGGTCCGCCCCCTGCCTGCGCGCAGCCAGCAGTCAGCAGCCAG
CAGCCAGCAGACCTGCCGGCGCCACCACCGAAGGCTTGTGGCTTAGCTTC
CTCTCTTCAGCCCTGTATTGCACACTCACAAGCACGTTTGCTAAGCGGCG
AGAGATTTGGTGCAATAGGTGGCTTAGTTTGGGTGAGATGATGCCGCTGA
TGGGTAGCATCCCTTGTTGGGCTCTTCGGATGCTGGCAGTGACCGCCGTG
GTTTGTACGATTGCCTTGGGGGAGGTTCACAACCTTGGAGACAACGACTT
CGACGACTTCGTCGCCGACCTTCCTGAACAAGCGCTCCTATTGGTCGACT
TCTACAAGGTGAGACACACAGGCTGGTCGGCGTGCCTGAAATTGTGTTGT
CTGAGGAACTGAGGAGTGTTGGGGAGGGGAGCGATTTGGCAACAGCAGCA
CCGACACCGCCTTCTAGACTAGAGGTAGTGTGTGTGAGGTTCTTGAAATT
CGAACCGACGGCGCTGTAACTGGCTTTTTTGCGCCACTAACCACTCGCCA
CTCGCCACCCACCGAGGTGTTGGCGAGGATGAGGGTGTGGAGGTTCTGTT
ACATGGATGTGGTATTCCCCCTCCGTTCTGCCGGTACGTTTCCACATTGT
GGTCATCGGTCGACTAGGACAGGGTCGCTCCAACTAAGCTCCCCTCGGGT
CTGCGGTACAAGGTACTGCTGTAGGTCCCTCACCTCTGACAGTAATTTAG
TGTCACACACGGGTTTACACGGCTGCTGTATACAGAGCAGTATGCAATAC
CCACCTAGCTTTCCGACCCCGGCCGTAAATATTGCAAGTACGCCTCACGT
CAAGCGGTCGTGCGCGAAGTTACTATATTTCTCGACAAATTACCAACCAG
CAATTTATGTTCTACAAAGTGCGGTAGCCCGCAGGGTACTGCTGTATCGA
AATGAAAGGGATCGAAAAGGGGGGCAACTGACTTGCACTGATAGGCGGTA
ACACTAAGACTGCAACAGCGGCAACGCACATCGCTTGGAATACGAAATAA
ATAGTAGTCTCGCGTGTTCAAATTATGCTCAATCACCCTGTTGGCTTGTT
TCGGGCGGCATCCTGATGTACACGAAATAGCCCGTTCTCGCGCCCCCCCC
CCCCCCCCCCCTTGCCCCCCCCCTTTCCCTGCTTACGGCCAAATAACACG
CAAGCCTGGCTGCAGACATTGCCAAAGATTGAGCCCGGTTCTAGACTACC
TCGAGGCGGAATGGGAGAAAGAAGAGCCCGACGATTCGAAGCGGTGGTTC
AAGCTTGCCAAGGTCGACATCGAGAAGAACCCTCGTCTGAAGACGGTGAG
CTACTCGTGCTGCCCGCTCACTACTGCTGTGCTACCGGCCCTGGCTTGGT
CGCACAATCTTGGTAAGCAATTCTGAAGCACCTCCGGTTCACTTTATTCT
TCTTATAGCAGGTGTTTTTCTACCGCAGGCGGGTAAAGCAGGGTGCAGAC
GCAGGTGCTCAATTGGGGCTAGTCCTTATGCCTTTCTTTGTTTTCCTTCC
TTCCTTCGGTTTCATGCGAATGACCACAGCGCCAGAAAATCCCTCCTGGG
GCCGGTGATCCACTATTGTGGGCGCGACAAAGTTCATTGACGAGATACAA
ATATGAAAGTCACGCGGCATCGTGGCTATCCTACGGTTCTTGATGTCGTG
ACGAGCGGTTACTATAGTCTTGAGGTTCGATCCCGTTCCGTTTGATCTCG
TTCCATCCCGTCTGTTTCTATCCCATCCCGCCTCCCGTCCTCGTGCAACC
GCAATCGCCAATTTACTTGGAAAGGTATTTGGAATAGCGAAAATTCCGGA
CCTCCGGTTCGTTCGAGCAGGACGGTGGGGCACATACCAGGGGGGGCGAC
TAATCGAGGCGAGCAACACAACAGTACCGCAGACCACGGTGCATGTGGGC
CTCTTGTGAGGCAAATGCAGCAGAGCGTTCGTCGGAGTGAAGGGCTTGAC
CACCATACGTACCCACAGGGAGCTGCTGAAGAGGGGCGAGGGGTAGGATA
AGGAGTAGAGAAGCGAGCAGCGAGGTACAGGCTAACGTTGATTAGGTGGC
GCTGATAAGCATTCAGTCACTTTCCCCGAATGAATGCCGTTTGCGTGACG
AGCCGCGTTGGAATGCACTCCCCGGTTCCGAAACCAGTGTGCTTCTCGCA
ACCTCGTGATTGCTCCGCTAAGCCACGACCCTCTCCCCAACGGGCGTGTG
TTGTCCCCCTCAGGATATTACGGAGTTCAAAGAGCGCATGGCTTTGGTTC
CCCTCCGCGTTGTGGATGCCGACGCTTTGACAGGGCTGGCGAGAAGGTCG
GAAGCCGTGTTTGTGCTCTCTGCCAACGTGAGTGAGCTCGTCAAGTCCGC
TATATTCTATTTTCTTGCTCCGTGTTGTATTAATAGCACGAACCGACATC
TCCGCCGACGCAGGTGAGGTGAGTTGTACCGCCTCTCTCGAGCATGTTGG
TGCTCCTCTTCTTGTTGGTGCCGGCGTCTTCCAAGTACATGCCCACCTCC
ACCGTCTGCGACGCGGGATAAGTGATGCTACGGAAGTGTCTGTACCTGTG
ACCCGCTGCAGCGCCGCCTTTGGTCTTGGACCGAAATCCGTTCTGAGGGC
TTGCGGCGCGTCTCCGCGATCACAGCAATGACGCGCGTTATTTCCTTCTG
TCTGTGCCGACTCTCTCTGTTCTTTGTTCTTTCTCTCGCTCTCTCTTTGT
TCTTTCTTTATATCTCTGTCTCTGTTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTGGCGTTCGCTGTGTAGGAGGATGCTGACCCTTCCACGGTGGC
CCCGGGGGTTCTCCTCGCCGCAACGTTGTCACAGCACGACGCCACCTTCT
GCACCACATCACCGGAGGTGTTGGCATCACTAGGACTAGGAGTAAGCGGG
TGAGTAATCATGACATGGACGCGATCGTATTGAGTTTTTGGTTACGCGTT
GGGCTATTCAGGATACAGGACGGCTTCTACCTCCTTACGCCCCACCTAGA
TTCGACGGCGTCGTTAGTGGGAAGCTCGCTTTCTCTTCATTGAGTTCACG
AACGTTCTCACGAACGTTCTCATAGGCTTCTTCGTTTTCTTTAGCCTCCA
AGAGACACGTCGCCAACCATGGCTTGATCTGCCACTTCTACCACTATTAT
TTGCGAGGGGTTCTGCCGCAGTCTCGCCAGGTGACGTCATATGCGTGTCC
CATGTTTGTCCAACAACCCTGGCCCTGAACCTTGCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCC
AACCACCCATGCCTTACCTCCTACGAACTCCATCGTGTGGTCCACGGCAA
CGTAACCATGGTGCCAGGGTGTCACCGGCGCTAGTCAAGGTAGTGGTCGG
GCAGGGGGGACGACTTCTGCAGCCGGCCGTTTATAAGACGGAGAGGGGCA
ACCAAGGTGTCAACCATGACAGCGCTACTGTCAGCGTCGCCACTGCCTCT
TCGTGGTCCGTGTTGAGCTGGGTGGAGAGGGAGAGGTTTGGATTGGTATC
GGACCTTTCGCCGGAAAATTTTATGAGGTATGTTGATGTACGTCGTGCTG
TAGTTAGCATCGTCCAAGTGTCAGAACGACCTCATCAGCCAATGGAGAGC
TTGGTTTTAGTTCTTACGATCTGAATGTTGCGTCGCGTCGGGAAGAATGG
AAATACTCGTTGTCTGCGACCACGAGCTTGATGGGTCTGAGGAGGGTAGG
GTAGGGTATTCTCTGAATTACCGTAGAATGGGTCGAGAGAGCGTTGTTCT
TGTTGTCTTCTATGGAGTTTTGCTTTACTACGCTCTAGGCAAAGCTAGCG
CCCACTTGATGTGTCGCGCGTGCATGTCTTACCTACCTTGTGTGCCTGGT
CAAGCGAGAAGATAATTTGCTGTCTTCCATACGGATGTCTTATCTATCTT
GTGTGCATGCTCAAGTGAGAAGATAATTTGCTGTCGTCCATACGGGCTGT
TTGTCGTACCCCCCCCCCCCCCTCCCACCCTCGGATATCGAAACGCCTTG
CGGTTTCGTAAGCGGCGCCCACACCAGTAACGAGATGGAAGCAATTTATC
AAATGAAAGGCTTTACGAGACTCGGGTTAGCACCTTGTGTTTGTTGGTTT
GAATAGATACATCGGTACATAATGTTTTTGTTTTTTTGCTGTCCTAGAAG
TAGTAACGCCAACCTTCTGGAAGGTTCTATTGTAGGTCGACTTGAACAGA
CATCCCTCATTCCCTGTTGCGCGCACGTAGCAGTTGTTGCCATGCACCGA
ACCGGGCATTGGCTGAGCATGCCACCCAGATCGTTCCACACCATCGACCA
TCGACATCGTACCTTTCCCCCCTACCCTAATCCCGAAACAAATCACCCAT
CCACGCAAACTGCGGCAGGCTGGGTTCCCTGGGAAGGTTGATGGTGCTCG
GAGTTTTTGACCCCAAGCACGAGGCGACAAGATCCTTCCACAAGGTACGC
AGCGACTCAAATGCAAAGTGCTGTCACATACGATTGCCTGCAATATGGTA
CTGCATGGCACGCGTTACCATTCTATGACATTCTTACCGAGATGGCGAGT
ACTCCATTCCCCTCGTTCATGCCATGCGCAAGACAACCCTTCCACGGAAG
CGAAACAGGTACATGTGACGGTGTTGCTACCCGTTTTGGTCTGTGCCTGT
GGCATGCGATGTCGGTCACGACTTGTTTCGGGACGGTGCAGCAGTACGTA
GTTTACCGTCTCACTGCCACTTGTACCAGGGTATGCATACAGCACGTCCG
TGAGACACTGGCAAGATTGCGATTCTGAGCGCATGTTCGCCCGATCACAG
ACAACACTTTCCCACCTCCCACCCCTTTTCCCGCAGAGGAAGCTGCTCCT
GCTTTGAAGTCTGGCGGTTGCGTTTAGATCTAGAGGAAGTTCCTGGTTTG
ATGTCTGGCGGCTACGTTTAGATCTGGGCCTCGTGCTGGTTGTTGTAGAC
CTAACCCTCATCTTCGCAGCTACTGTACATAGAGAGGGAGGGCATCGTTG
AATCTACCTTCCGCCACTTAGCTCTTGTGCAAAACCTCGTATTGGCAGCT
TGATCGAGAGAGAGCATGGTTGAACCGAGCCTCCGCCATCACGAAATTGT
GTTATCGAGACCTCATCTTCGACGCAGGGGGAGGGTGTGTCATTGATGAA
GCTTCCGCCATGCTGTTCGCCGCTCGCGCTTCTTCCCAACGTTAAAACTT
GCACTTCGAACGCGAGTCTACTGCTGTAGCTCTCCGTTGTATCCCCCTGC
CCAGGTACTGCACCCACCCGCAGATAGATGGTATATGCATACGACCCTGT
TGAATGGATCACACAAACCACCGCTCGTTCAGGTTTTTGGGGATGTAGCC
TCGGACATGGGTGTGAGGCACTCCGAGAGGCTCATGTTCGGGACGGTAAA
CCGCGTTAAGATGCCGGGTTTCATGGAGACTTTCAACGTGTACGAGGGGC
ATCCGCGGGTCATAGTCATGGTGAGAGTGAGACCGGTGTTGTGTCACGTG
TGATGGCTGGCATGCCTCTCAAGTTCTACCATGACGCTGGATACGGATGG
TTTCCCGACTCGTGTCCCTCCTCGCAAATGATCATCCTACATGTTTGTAT
GATGATACGCGTGTTTATTTGTTCCTCGCTGATTCGCGTTTGGTGCCCGC
GTTGGCAAAACTCGCACCAATAGAAGACCCCGCCACTACGACGCAAACCC
GGTCAACAACAACGTAGCAGGTTTGTTGTGTTTTGCGTAGATTATTTCAA
CCACTCGGCCACCCTCCGTTGGTGTTTCCAGGACATTGCGTCGGACGAGT
TCTACACCGTGGAAAACATGCGGATGGAAGTTGGGGAAATGGAGGCATTC
CTAATCGACGTCTTGGCAGGTGGGTTGGCTGGCCTGCAAGTTGTCATGTG
TGGCCTGTCGCCTGCAACTTGTGTGGAACGCGTGTTCGCGAGTATCGGCT
GTCGCAGGTTTAGTGCTCTTTTCGTTGGCACGATGAGCCGCCGTGCTCGC
TGTGGTCTGTCGATTGCTGCTGGCGTCTGTTTTCCAACCATCAAGCATGG
CATGTGCACGAGCATTGGTGTGCACACTTTGAGCAAGTTGTTTATTGCCG
GCTTGGTTGGTCCGGAAGTTCTTAGAACCTATCTGTGGAAAGGAGTTCGT
ATGTTACTGCAGATTTAGACCTTTTCTACAAGATCGTTCTGTCGTATGTG
TGAGGTGCATCTGTGAACGTTGGTATTGTAGCCAAGAAATAGAAAGGCGT
TTGGTCGTGAAGTGACCTCGCCGCCTCACCGCTTTTGAACCGTTTCAGCA
AGGTTTTTCCCGATTCGATCGCGTTTCGACCGATGTGTGCACCCTCTCAA
ATGTTTGAGCGAAAGTACCCGTTGGAGCAGCAGTCAGAGAAAGGGCCCTT
CTCGCTGGTGTTGAGATACCATACCATACCATACCTATTGCCGTACCAGG
CGTCGAGATACCGCAGCTAAATAGCTCTTCGGTGCGCAACAAAACGACAA
CCTCAACGGTTTAAGGATATCGCAGTAGTGTCCCTTGCCAAGTTTGCAGC
GCTTCTATGCTACGACTTGCGTAGTTTTATCTGCCCCCGCTGTTTTTTTG
CTCGGGATCGTACATCCCCGTTGGGGGCATGTGAAGTGGAAGCGGGCATT
TTGTTTTTTTTGTCGACTCTGACCCAACCCTGACCCTAACCCTAATCCGT
CTGTGAAAGGGTTCATTCCGGCCCGAGTGCCGTCTACCAATTCCGCGCGG
TACGCGATGAGGGTCTGGTGGCTCGTCCAGAAGGGAGGTGCGTGGAGCTT
CCTTCTCCTCATCCCGGTGGTGGCACTGGTGTGGGTGTTCTGCGACACGC
CTCAACGGGAGGAAGCGCGGGCAGCTTTGCGGGAAGCCAGGAAGGCTGAG
AGGGATGAGGCTCTTCGACGCAAGGACCAGTGAAACCGCGGCAGACGCAC
ACGCCTGCCTCCGAGTGATGTTGAGCACATGCCTCCTTCCGTGGTGCGGG
GAACAGCATCACTTGAACAGCATCTGTCTGTAGGATATCTGTAGGATGCT
TAAGAGGTAGATGCGGCAGCTTCGGCGGCACTTTAGAGTGGCGATTACGT
TTCGTGTCGTAAATTATGGTGTACAGAGTAAGTAGAAGACAGACGTTTGC
AGTGTATGATCCGTCCACGGTGTCCGGGATCTTGATGGCACATGTCTGCC
GCCGATAGCACATTTTTGAGGCAAGGACCCTCCTCCTGATTGTTGTACAT
TGCACTGCCCGTCGACAGAGGTCTCCTCGGTATTGTCTATTAATGTTATT
ACAGGTGTAGACCAAGTGTGGTGAACTGTCGTGTTTTGTATCCCTTACCT
GGCCCTAGTGCTTCGTGCGATCATTCATCTGCGTGTGAGCTTGTCTACTT
GCTCGGTGTTGTGTTGATAAATCTAAACCTACCCTACCCTCGATCTACGC
GTTCTCCATCTACTAAAAGCATGTTTCGTGCGGGGTTGATTGTTACAGTG
TGTGGGTGAGGTGCCACCTTTTGTCGGATTTCCAATCGTTTTGGCATTTT
GCAACAACACTCTATATTGCATACGACATGATTGATGATTGAACCGCTCG
GCCCTTGGGCAAGAGAGCAGAATATATTTTTTTGTCATCTCGATTGTTGT
CTGTGGGACTCGTTTTCTCTGCTCCACAGCAGTGTTGACTGCCAGGTAGC
GCTGTGTACGGCAGTATTGGATCCCGTTCCGGTGGGGGTCATGTCTGGTC
GGCACTAAAAATATGCAGCAGTATTGTAGCTTGACCACA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1104:7512..15600+

>mRNA_E-siliculosus-1a_F_contig1104.713.1 ID=mRNA_E-siliculosus-1a_F_contig1104.713.1|Name=mRNA_E-siliculosus-1a_F_contig1104.713.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2772bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1104:7512..15600+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGCCGCTGATGGGTAGCATCCCTTGTTGGGCTCTTCGGATGCTGGC
AGTGACCGCCGTGGTTTGTACGATTGCCTTGGGGGAGGTTCACAACCTTG
GAGACAACGACTTCGACGACTTCGTCGCCGACCTTCCTGAACAAGCGCTC
CTATTGGTCGACTTCTACAAGATGATGCCGCTGATGGGTAGCATCCCTTG
TTGGGCTCTTCGGATGCTGGCAGTGACCGCCGTGGTTTGTACGATTGCCT
TGGGGGAGGTTCACAACCTTGGAGACAACGACTTCGACGACTTCGTCGCC
GACCTTCCTGAACAAGCGCTCCTATTGGTCGACTTCTACAAGCCTGGCTG
CAGACATTGCCAAAGATTGAGCCCGGTTCTAGACTACCTCGAGGCGGAAT
GGGAGAAAGAAGAGCCCGACGATTCGAAGCGGTGGTTCAAGCTTGCCAAG
GTCGACATCGAGAAGAACCCTCGTCTGAAGACGCCTGGCTGCAGACATTG
CCAAAGATTGAGCCCGGTTCTAGACTACCTCGAGGCGGAATGGGAGAAAG
AAGAGCCCGACGATTCGAAGCGGTGGTTCAAGCTTGCCAAGGTCGACATC
GAGAAGAACCCTCGTCTGAAGACGGTATTTGGAATAGCGAAAATTCCGGA
CCTCCGGTTCGTTCGAGCAGGACGGTGGGGCACATACCAGGGGGGGCGAC
TAATCGAGGCGAGCAACACAACAGTATTTGGAATAGCGAAAATTCCGGAC
CTCCGGTTCGTTCGAGCAGGACGGTGGGGCACATACCAGGGGGGGCGACT
AATCGAGGCGAGCAACACAACAGATATTACGGAGTTCAAAGAGCGCATGG
CTTTGGTTCCCCTCCGCGTTGTGGATGCCGACGCTTTGACAGGGCTGGCG
AGAAGGTCGGAAGCCGTGTTTGTGCTCTCTGCCAACGATATTACGGAGTT
CAAAGAGCGCATGGCTTTGGTTCCCCTCCGCGTTGTGGATGCCGACGCTT
TGACAGGGCTGGCGAGAAGGTCGGAAGCCGTGTTTGTGCTCTCTGCCAAC
GAGGATGCTGACCCTTCCACGGTGGCCCCGGGGGTTCTCCTCGCCGCAAC
GTTGTCACAGCACGACGCCACCTTCTGCACCACATCACCGGAGGTGTTGG
CATCACTAGGACTAGGAGTAAGCGGGAGGATGCTGACCCTTCCACGGTGG
CCCCGGGGGTTCTCCTCGCCGCAACGTTGTCACAGCACGACGCCACCTTC
TGCACCACATCACCGGAGGTGTTGGCATCACTAGGACTAGGAGTAAGCGG
GGTGTCACCGGCGCTAGTCAAGGTAGTGGTCGGGCAGGGGGGACGACTTC
TGCAGCCGGCCGTTTATAAGACGGAGAGGGGCAACCAAGGTGTCAACCAT
GACAGCGCTACTGTCAGCGTCGCCACTGCCTCTTCGTGGTCCGTGTTGAG
CTGGGTGGAGAGGGAGAGGTTTGGATTGGTATCGGACCTTTCGCCGGAAA
ATTTTATGAGGGTGTCACCGGCGCTAGTCAAGGTAGTGGTCGGGCAGGGG
GGACGACTTCTGCAGCCGGCCGTTTATAAGACGGAGAGGGGCAACCAAGG
TGTCAACCATGACAGCGCTACTGTCAGCGTCGCCACTGCCTCTTCGTGGT
CCGTGTTGAGCTGGGTGGAGAGGGAGAGGTTTGGATTGGTATCGGACCTT
TCGCCGGAAAATTTTATGAGGCTGGGTTCCCTGGGAAGGTTGATGGTGCT
CGGAGTTTTTGACCCCAAGCACGAGGCGACAAGATCCTTCCACAAGGCTG
GGTTCCCTGGGAAGGTTGATGGTGCTCGGAGTTTTTGACCCCAAGCACGA
GGCGACAAGATCCTTCCACAAGGTTTTTGGGGATGTAGCCTCGGACATGG
GTGTGAGGCACTCCGAGAGGCTCATGTTCGGGACGGTAAACCGCGTTAAG
ATGCCGGGTTTCATGGAGACTTTCAACGTGTACGAGGGGCATCCGCGGGT
CATAGTCATGGTTTTTGGGGATGTAGCCTCGGACATGGGTGTGAGGCACT
CCGAGAGGCTCATGTTCGGGACGGTAAACCGCGTTAAGATGCCGGGTTTC
ATGGAGACTTTCAACGTGTACGAGGGGCATCCGCGGGTCATAGTCATGGA
CATTGCGTCGGACGAGTTCTACACCGTGGAAAACATGCGGATGGAAGTTG
GGGAAATGGAGGCATTCCTAATCGACGTCTTGGCAGGACATTGCGTCGGA
CGAGTTCTACACCGTGGAAAACATGCGGATGGAAGTTGGGGAAATGGAGG
CATTCCTAATCGACGTCTTGGCAGGGTTCATTCCGGCCCGAGTGCCGTCT
ACCAATTCCGCGCGGTACGCGATGAGGGTCTGGTGGCTCGTCCAGAAGGG
AGGTGCGTGGAGCTTCCTTCTCCTCATCCCGGTGGTGGCACTGGTGTGGG
TGTTCTGCGACACGCCTCAACGGGAGGAAGCGCGGGCAGCTTTGCGGGAA
GCCAGGAAGGCTGAGAGGGATGAGGCTCTTCGACGCAAGGACCAGTGAGG
TTCATTCCGGCCCGAGTGCCGTCTACCAATTCCGCGCGGTACGCGATGAG
GGTCTGGTGGCTCGTCCAGAAGGGAGGTGCGTGGAGCTTCCTTCTCCTCA
TCCCGGTGGTGGCACTGGTGTGGGTGTTCTGCGACACGCCTCAACGGGAG
GAAGCGCGGGCAGCTTTGCGGGAAGCCAGGAAGGCTGAGAGGGATGAGGC
TCTTCGACGCAAGGACCAGTGA