Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 378 |
| Model size | 379 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927610.9321973-CDS-E-siliculosus-1a_F_contig11037:509..887 | 1622927610.9321973-CDS-E-siliculosus-1a_F_contig11037:509..887 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig11037 510..887 + |
| 1696318608.6987565-CDS-E-siliculosus-1a_F_contig11037:509..887 | 1696318608.6987565-CDS-E-siliculosus-1a_F_contig11037:509..887 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig11037 510..887 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11037.709.1 >prot_E-siliculosus-1a_F_contig11037.709.1 ID=prot_E-siliculosus-1a_F_contig11037.709.1|Name=mRNA_E-siliculosus-1a_F_contig11037.709.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=126bp
RDIKQGYERGKKSPTDLGDPHRGYEEACQRCKAYRMVYLAAVENEERVGT
MCLSEYQAKQCSSKANQDGRSNNSRLKKNKNKRRNNLQFRRSTKTRDGTK
RDLPSSSAHQNRPTTRPVPKSMSTS* back to topmRNA from alignment at E-siliculosus-1a_F_contig11037:510..887+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig11037.709.1 ID=mRNA_E-siliculosus-1a_F_contig11037.709.1|Name=mRNA_E-siliculosus-1a_F_contig11037.709.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=378bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11037:510..887+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGGGACATCAAGCAAGGCTATGAGAGAGGTAAGAAATCCCCAACAGATCT
AGGAGATCCACATCGTGGGTACGAGGAGGCATGTCAGCGATGTAAGGCTT
ATCGAATGGTATATCTAGCAGCTGTTGAGAACGAAGAAAGGGTAGGAACG
ATGTGTCTATCAGAGTATCAAGCCAAACAATGTTCGTCTAAAGCAAACCA
AGACGGGCGATCAAACAATTCCCGTCTCAAAAAAAACAAAAACAAGCGTC
GGAACAACCTCCAATTCAGAAGGTCAACCAAAACAAGAGACGGAACAAAA
CGCGACCTCCCTTCCTCATCGGCACATCAAAACAGACCAACAACACGCCC
TGTGCCGAAGTCGATGTCAACGTCATAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11037:510..887+ >mRNA_E-siliculosus-1a_F_contig11037.709.1 ID=mRNA_E-siliculosus-1a_F_contig11037.709.1|Name=mRNA_E-siliculosus-1a_F_contig11037.709.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=756bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11037:510..887+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGGGACATCAAGCAAGGCTATGAGAGAGGTAAGAAATCCCCAACAGATCT
AGGAGATCCACATCGTGGGTACGAGGAGGCATGTCAGCGATGTAAGGCTT
ATCGAATGGTATATCTAGCAGCTGTTGAGAACGAAGAAAGGGTAGGAACG
ATGTGTCTATCAGAGTATCAAGCCAAACAATGTTCGTCTAAAGCAAACCA
AGACGGGCGATCAAACAATTCCCGTCTCAAAAAAAACAAAAACAAGCGTC
GGAACAACCTCCAATTCAGAAGGTCAACCAAAACAAGAGACGGAACAAAA
CGCGACCTCCCTTCCTCATCGGCACATCAAAACAGACCAACAACACGCCC
TGTGCCGAAGTCGATGTCAACGTCATAGCGGGACATCAAGCAAGGCTATG
AGAGAGGTAAGAAATCCCCAACAGATCTAGGAGATCCACATCGTGGGTAC
GAGGAGGCATGTCAGCGATGTAAGGCTTATCGAATGGTATATCTAGCAGC
TGTTGAGAACGAAGAAAGGGTAGGAACGATGTGTCTATCAGAGTATCAAG
CCAAACAATGTTCGTCTAAAGCAAACCAAGACGGGCGATCAAACAATTCC
CGTCTCAAAAAAAACAAAAACAAGCGTCGGAACAACCTCCAATTCAGAAG
GTCAACCAAAACAAGAGACGGAACAAAACGCGACCTCCCTTCCTCATCGG
CACATCAAAACAGACCAACAACACGCCCTGTGCCGAAGTCGATGTCAACG
TCATAG back to top
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