mRNA_E-siliculosus-1a_F_contig11.679.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 1814 bits (4698), Expect = 0.000e+0 Identity = 1101/1442 (76.35%), Postives = 1162/1442 (80.58%), Query Frame = 3
Query: 249 MAATDREVLVILFLSTGGTRWERNGNWNTTAELSTWCGIKVDGQGRVMELSLPENNLQGSLPKELGALTNLKSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVYNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALWDHGTNVSPDEDLLQGNFACNALPKQLEALLAKLSHLRYGLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTRGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGELRGVSLVLPRSWNIALEVLDALGSGRDPVESAQ-TVLQSGGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERYPVLRPEAARGLHPEQAQRRYTAWWDGVKEEMGDVLRGAKGPTGGGAVESVASVASGKVAGLERSFGELAGKLEQLFGNLQQQLGQHHLDVQGRFGEMDKRFKRLVDMIDADDGVMGRLDFLVGMMMAERREGFDTPRKACVLPPWDFAETHGLSDEEQAPERWVKRVQAWREDDFKQGKGVFKTKMRLFLVCAVTHRLVPCGPNGQGYDIQRPRTWFRMSVSVATFVLQVVCATLAAITAAPLSGGGALAEESLSAALGSMESMLERQLAELSLDDGGVDVAAGPQTAQLKAAAYTSLREFIHGIEDTACLEIVKKTKKAHRERRAPPSASEFVFFEEKMVQVQRRDGDAAVQWVLKEHESAWYDQMRSAPVS 4571
MAATDREVLV +FL T GT WERN NWNTTAELSTW GIKVDGQGRV+ELSLP+NNL+GS+PKELG LTNLKSL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A WDH T+V PDEDLLQGN A NALPKQLEALLA LS L G V +NPWQEPPEAVVSKGI AV+ YFTDLFAEG+APVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT G EESTVQIDVEQMDVNG TLRVYDCAGQVAYTGLLQMFLSP+AVSLLVCD GAFGQRD +L DQLKKDLSKLQELRVCDWLRSLSF IPDSDV++VATKCDLAAGM DAAGRIEGAIG+WLESWSGAGM AV VEDGVSLTSCF P PNEDGGA LGKRKSPDE+STWACDWREG+ VESQPSLL RVMYNSKG +RG SLVLPRSWNIALEVLDALGSGR+PVESAQ VL SGG KGA + VPAV QRNQGV GLTRA+LSTKWNEV+AAL GDGVS+V PDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDP GDVSLGDTGITLKEDKHIASWNRLKGHGVLEP +ARVLWP GLSNYVLP LDSLGLTYPLDDD AEGLVVLLRLDE RPEDVGKELDDFRRDHTAVLSVKWK+FLGVPPGAIEKMLTRCC+LGTLRTFWRFGVLVQGSLGGGIAA+TFAL VEYSH+ CEVDMKVYG+ISTAAPWAALSFG+SVFQAMCSEFPGLRWRA LKCPQHEQ++QI KAATR GDK L G TC+LC+S+TGG GAAA+ LLE+VD+ + ++ +EV GRLV+AQ+RYPVLRPEAARGLHPEQAQRR+ AWWDGVKEEMGD+LRGA+GP GG A S ASVAS +VA LER L +LQQQ+GQ H DV+ R G +D R LVDMIDADDGVMGRLDFLV MMMA RREGFDTPR+ACVLPPWDFA+ HGLSDEEQAP+ WVKR+ WREDDFKQGKGVFKTKMRLFLVCA THRLVPCGPNGQGYDIQ PRTWFRMSVSVATFVLQVVCATLAAI AAPLSG GALAEE+ SAALGSMESMLE QLA L+LDDGGVD AA Q AQL AAAYTSLREFIHG+EDTA LEI K TKKA+RERRAPPS+ EFVFFE+KMVQVQRRDGDAAVQWVLKEHESAWYDQ R A VS
Sbjct: 1 MAATDREVLVAIFLLTDGTGWERNDNWNTTAELSTWYGIKVDGQGRVVELSLPKNNLRGSIPKELGTLTNLKSLCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------AFWDHCTDVLPDEDLLQGNLAGNALPKQLEALLATLSRL--GFLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQISKAATRPGDKSLFGATCSLCDSKTGGLGAAAMSLLEIVDVHECVDKIFQEVAGRLVQAQDRYPVLRPEAARGLHPEQAQRRFDAWWDGVKEEMGDMLRGARGPIGGEAAGSTASVASAEVARLER-----------LVNDLQQQVGQQHQDVRERIGAVDTR---LVDMIDADDGVMGRLDFLVVMMMAMRREGFDTPRRACVLPPWDFAQGHGLSDEEQAPDCWVKRLGQWREDDFKQGKGVFKTKMRLFLVCAATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIAAAPLSGAGALAEETFSAALGSMESMLEAQLAGLTLDDGGVDAAAKTQAAQLNAAAYTSLREFIHGVEDTARLEIAKATKKANRERRAPPSSPEFVFFEQKMVQVQRRDGDAAVQWVLKEHESAWYDQTRPALVS 1282
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 1753 bits (4541), Expect = 0.000e+0 Identity = 897/1096 (81.84%), Postives = 963/1096 (87.86%), Query Frame = 3
Query: 1287 ALWDHGTNVSPDEDLLQGNFACNALPKQLEALLAKLSHLRYGLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTRGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGELRGVSLVLPRSWNIALEVLDALGSGRDPVESAQT-VLQSGGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERYPVLRPEAARGLHPEQAQRRYTAWWDGVKEEMGDVLRGAKGPTGGGAVESVASVASGKVAGLERSFGELAGKLEQLFGNLQQQLGQHHLDVQGRFGEMDKRFKRLVDMIDADDGVMGRLDFLVGMMMAERREGFDTPRKACVLPPWDFAETHGLSDEEQAPERWVKRVQAWREDDFKQGKGVFKTKMRLFLVCAVTHRLVPCGPNGQGYDIQRPRTWFRMSVSVATFVLQVVCATLAAITAAPLSGGGALAEESLSAALGSMESMLERQLAELSLDDGGVDVAAGPQTAQLKAAAYTSLREFIHGIEDTACLEIVKKTKKAHRERRAPPSASEFVFFEEKMVQVQRRDGDAAVQWVLKEHESAWYDQMRSAPVS 4571
A WDH T+VSPDE+LLQGN A ++LPKQLEALLA LS L GLHV NPWQEPPEAVVSKGIPAVR YFTDLFAEG+APVGRKMIKV+LVGQEGAGKTSLRQSLRTGRPTPT GPEESTVQIDVEQMDVNG TLRVYDCAGQVAYTGLLQMFLSP+AVSLLVCDTGAFGQRD SLTD DQLKKDL+KLQELRVCDWLRSLSF IPDSDV+MVATKCDLAAGMAADAA R+ G G W+ESWS A MTAVRVEDGV+LTSCFA PNEDGGA LG R+SP+E+STWACDW +GM VESQPSLL RVMYN+KGELRG SLVLPRSWNI L VLDALGSGRDPVESAQ VL SGG KGA + VPAV QRNQGV GLTRA+LSTKWN+V+AAL DGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDP GDVSLGDTGITLKEDKHIASWNRLKGHGVLEPE+A VLWP GLSNYVLPTLDSLGLTYPLDDD AEGLVVLLRLDE RPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCC+LGTLRTFWRFGVLVQGSLGGG+AAKTFAL +EYSH+TCEVDM+VYG+I TAAPWAALS+G+SVFQAMCSEFPGLRWRA LKCPQHEQ++QI + ATR GDKLLHG TCNLC+SETGG GAAAIDLLE+VDI++ RG+LVR V+ RLVKAQ RYPVL A R LHPE A R AWW+GVKE++ +LRGA+GP+ G AV S ASVAS ++A LER L +LQQQ+G+ H DV+ + G +D R LVDMIDADDGVMGRLDFLV MMMA RR+GF+TPR+ACVLPPW+FA+ HGLS +EQAPERWVKR+ WREDDFKQGKGVFK KMRLFLVCA THRLVPCGPNGQGYDIQ PRTWFRMSVSVATFVLQVVCATLAAI AAPLSG GALAEE+ SAALGSMESML+ QLA +LDDGGVD AA QL AY SLR FIHG+EDTA EI K TKKAHRERRAPPS+SEFVFFE+KMVQVQRRDGDAA QWVLKEHESAWYDQ RSAPVS
Sbjct: 167 AFWDHSTDVSPDEELLQGNLAGSSLPKQLEALLATLSQL--GLHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGMAADAAARMAGGAGNWIESWSDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQISRTATRRGDKLLHGATCNLCDSETGGLGAAAIDLLEMVDIRRSRGDLVRAVNRRLVKAQGRYPVLCLGATRALHPELAHRLSDAWWEGVKEDISGILRGARGPSDGEAVASTASVASDEMARLER-----------LVTDLQQQVGRQHQDVREQIGAVDTR---LVDMIDADDGVMGRLDFLVVMMMAMRRDGFETPRRACVLPPWNFAQGHGLSAKEQAPERWVKRLGQWREDDFKQGKGVFKKKMRLFLVCAATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIAAAPLSGAGALAEETFSAALGSMESMLKAQLAGQTLDDGGVDAAA---ETQLDGGAYASLRVFIHGVEDTARHEIAKATKKAHRERRAPPSSSEFVFFEQKMVQVQRRDGDAAAQWVLKEHESAWYDQTRSAPVS 1243
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE) HSP 1 Score: 1186 bits (3067), Expect = 0.000e+0 Identity = 648/1108 (58.48%), Postives = 785/1108 (70.85%), Query Frame = 3
Query: 1284 TALWDHGTNVSPDEDLLQGNFACNALPKQLEALLAKLSHLRYGLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTRGPEESTVQIDVEQMDVN-GATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGELRGVSLVLPRSWNIALEVLDALGSGRDPV------ESAQTVLQSGGQKGAIKAVPAVNQRNQGV-VGLTRAELSTKWNEVIAALVGDGVSIVNPDHAL-EGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERYPVLRPEAARGLHPEQAQRRYTAWWDGVKEEMGDVLRGAKGPTGGGAVESVASVASGKVAGLERSFGELAGKLEQLFGNLQQQLGQHHLDVQGRFGEMDKRFKRLVDMIDADDGVMGRLDFLVGMMMAERREGFDTPRKACVLPPWDFAETHGLSDEEQAPERWVKRVQAWREDDFKQGKGVFKTKMRLFLVCAVTHRLVPCGPNGQGYDIQRPRTWFRMSVSVATFVLQVVCATLAAITAAPLSG-----GGALAEESLSAALGSMESMLERQLAELSLDDGGVDVAAGPQTAQLKAAAYTSLREFIHGIEDTACLEIVKKTKKAHRERRAPPSASEFVFFEEKMVQVQRRDGDAAVQWVLKEHESAWYDQMRSAP 4565
+A WDH ++V+ DE+L QG A ++PKQL+ LL L L +E NPW+EPPEAVV G+ A YF DLF EGV+ V R MIKVVLVGQEGAGKTSLRQS+R+ +PTPT GP ESTVQIDVE+++++ G +LR+YDCAGQVAYTGLLQMFLSP+AV+LLVC+T AFG+R + L +DL KLQELRVC WLRSLSF IPDSDV+ VATKCD AAGMA A R+E AI KWL WS + MTAVRVEDGVSLTSC P E G LGKRKSP E+S WACDWR+ E PSLL RV+YNSKG +RG +LVLPRSWNIAL VLDALG+GR + + +G ++G + + + N+G +G E+ + + + G + P L GAL ++EGSLVRHETYVFLDVTWLA+ILKPLLNHR+DED G +SLGDTGITL K SW R K GVL+PE+A +LWP L +YVL TL+SLGL + LDD A GLVVLLRL + RP VGKELDDFRRDH A+ SV WKI +GVPPGA+EK+LTRCC +G LRTFWRFGVLVQG++GG A KTFA+ VEYSH+ E+D+KVYGNI+T APWAALS G+S + MCS FPGLRW A LKCP+H+Q++ I ATR GDKLL C LC+SETGG GAAA +LL++VD+ Q R ++ REVHGR V Q +YPVLRPE +R + EQA+RR+ W G++EE +LRG GG ES + G ++G+ KL QL G+LQ QL Q+ DV+G GE+ L ++DAD G M + +FLV M+M R EG DTPR+ACVLP W+FA++HGLS+ EQ PE WVKR+ WREDDFKQGKGVF K RLFL+CA THRLVPCGP GQGYDIQ+ RTW R S+S F LQVVC+TLAA+ AAP G + E ++S ALGS++S LE L+L+D ++V QTA L+ AY SLREFIHG+ED A +EI K TKKAH+ERRAPPS+SEFVFF +KM QVQR DGDAAVQWVLK E AW + SAP
Sbjct: 301 SAFWDHSSDVARDEELQQGCSAGGSIPKQLDGLLTLFRKLERNLSLEGNPWKEPPEAVVKTGMAAASAYFADLFEEGVS-VRRNMIKVVLVGQEGAGKTSLRQSIRSRKPTPTSGPAESTVQIDVEEIEMDDGVSLRIYDCAGQVAYTGLLQMFLSPRAVTLLVCNTEAFGERGGYPAGGNPLNEDLYKLQELRVCSWLRSLSFRIPDSDVVAVATKCDRAAGMAVVMAERMELAIRKWLREWSRSQMTAVRVEDGVSLTSCVPSAPQERDGIALGKRKSP-EDSMWACDWRQDTPGEPLPSLLHRVIYNSKGHIRGAALVLPRSWNIALVVLDALGNGRQGSRRFGARDGRRGGRATGTRRGDCREIDPAARWNRGYNMGRPIREMERRRS----SSEGRRSNSHEPRPRLGRGALNQAQYEGSLVRHETYVFLDVTWLAKILKPLLNHREDED-FFGSLSLGDTGITLDGHKDKVSWQRFKQTGVLKPELAGLLWPGDLCDYVLRTLESLGLAHQLDDRFAGGLVVLLRLGKERPASVGKELDDFRRDHEAIFSVTWKISMGVPPGAVEKVLTRCCSIGELRTFWRFGVLVQGNMGGVTAGKTFAMLVEYSHKGSEIDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHKQDMPISNTATRPGDKLLLEHGCTLCSSETGGVGAAATELLQMVDVLQNRDKMFREVHGRFVDLQRQYPVLRPEKSREFNSEQARRRFETWLTGMREEAAGLLRG-----GGDVGESTKAGERGDISGVSDDV----AKLPQLVGHLQHQLEQNQKDVRGWLGEV------LEAIVDADAGAMKQREFLVAMLMKVRSEGIDTPRQACVLPEWNFAQSHGLSEHEQTPEVWVKRLHEWREDDFKQGKGVFWKKKRLFLLCAHTHRLVPCGPKGQGYDIQQLRTWARKSISATAFALQVVCSTLAAMAAAPXXXXXXXXAGGVVEATVSEALGSLQSKLEG----LTLEDDKLNV--DHQTANLEGNAYASLREFIHGVEDDARVEIFKATKKAHKERRAPPSSSEFVFFSQKMTQVQRHDGDAAVQWVLKGQEDAWRKEKMSAP 1380
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 681 bits (1757), Expect = 1.100e-213 Identity = 373/731 (51.03%), Postives = 478/731 (65.39%), Query Frame = 3
Query: 1284 TALWDHGTNVSPDE-DLLQGNFACNALPKQLEALLAKLSHLR--YGLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT-RGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGE-LRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQSGGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERY 3452
TALW+H NV + + + P+QL LL L L+++ NPW EPPE++V+KG +RGYF DL+AE V R +K++LVGQEGAGKTSLR+S++ TPT EESTV DVE+M++ G+++RVYDCAGQVAYTGLLQMFL+P+AV ++VC+ +FGQ+ + Q+K+D KL+ELRVCDWLRS+S +PD+DVI+VATKCD G A + RIE A WL SW +GM VR+E GV LTSC EDG ++ E W CDWR+G PSLL R++ G LRG +V+PRSW+IAL VL+AL GRDPVE V++ G A + G+T +L TKW E L G +++ N D+ALEGAL IRE +GSLVRHET+VFLDV WLA+ILKPLLNH+D+E G V+LGDTG +TL++ IASW RLK GVLEP +AR LWP+GLS YV+PT+ SLGLT+PL++D A GLVVLLRL+ RPE VGK +D F D T L WKIFLGVP GAIEK+LTRCC LG ++TFWR GVLV G +G + FA+ +EYS E+ +++G+IST APW ALS+ VS M +FPGLR R LKCPQH + + TR GDK+L G+ C C+ +T G GAAAIDL+ +VDI+ R + REV R V + +Y
Sbjct: 250 TALWNHTLNVEDARHEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAE-PCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGER---STRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEM---VVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEE-TFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQY 972
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 665 bits (1715), Expect = 7.500e-209 Identity = 378/731 (51.71%), Postives = 472/731 (64.57%), Query Frame = 3
Query: 1284 TALWDHGTNVSPDEDLLQGNFACNA-LPKQLEALLAKLSHLRYG-LHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT-RGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGE-LRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQSGGQKGAIKAVPAVNQRNQGVV-GLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERY 3452
TALWDH N E+ GN LP QL LL L G L ++ NPW EPP ++VSKG ++RGYF DL+ E + V R +K++LVGQEGAGKTSLRQS++ PT EESTV DVE M + G+ +RVYDCAGQVAYTGLLQMFL+P++V +LVC+ AFGQ+ T Q+K+D KL+ELRVCDWLRS+S +P++DVI+VATKCDL G A + RIE A WL SW GM VR+E GV LTSC A E+G G S E WACDWR+ P L+ R++ G LRG +VLPRSW+IAL VL+AL GRDPVE L ++ A + R GV G+T L KW E + L GV++ N +ALEGAL IRE +GSLVRHE +VFLDV WLA+ILKPLLNH+D+E G V+LGDTG +TL++ IASW RLK GVLEP +AR +WP+GLS YVLPTL SLGLT+PL +D A GLVVLLRL+ RPE VGK +D F D T S WKIFLGVP GAIEK+LTRCC LG ++TFWR GVLV G LG + FA+ +EYS E+ +++G+IST APW ALS+ +S + M +FPGLR R LKCPQH + + T+ G KLL + C C+ +T G GAAAIDL+ +VDI+ R + R+V R V+ + +Y
Sbjct: 154 TALWDHTQNAQHVEE--GGNRTLGGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVES-SRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTG-GQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNAS---ERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAA----RQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEE-TFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQY 872
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 666 bits (1719), Expect = 2.530e-207 Identity = 448/1119 (40.04%), Postives = 602/1119 (53.80%), Query Frame = 3
Query: 1284 TALWDHGTNVSPDEDLLQGN-FACNALPKQLEALLAKLSHLRY----------GLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT-RGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPD--EESTWACDWREGMYVESQPSLLQRVMYN-SKGELRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQS-GGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERYPVLRPEAARGLHPEQAQRRYTAWWDGVKEEMGDVLRGAKGPTGGGAVESVASVASGKVAGLERSFGELAGKLEQLFGNLQQQLGQHHLDVQGRFGEMDKRFKRLVDMIDADDGVM-GRLDFLVGMMMAERREGFDTPRKACVLPPWDFAETHGLSDEEQAPERWVKRVQAWREDDFKQGKGVFKTKMRLFLVCAVTHRLVPCGPNGQGYDIQRPRTWFRMSVSVATFVLQVVCATLAAITAAPLSGGGALAEESLSAALGSMESMLERQLAELSLDDGGV------DVAAGPQTAQLKAAAYTSLREFIHGIEDTACLEIVKKTKKAHRERRAPPSASEFVFFEEKMVQVQRRDGDAAVQWVLKEHESAWYDQMRSA 4562
+ALWDH NV + +G+ +P QL LL + L + +NPW EPPE++V+KG ++RGYF DL+AE + R+ +KVVLVGQEGAGKTSLRQS++ + T T E STV DVE M++ G+++RVYDCAGQVAYTGLLQMFL+P++V +LVC+ G FG++ S + DQ+++D KL+ LRVC+WLRS+S +PD++VI+VATKCDLA G A + R+E A +WL SW+ M +VR+E GV LTSCF P+ G G+ S + +S WACDWR+ E PSL+ R++ KG LRGV +VLPRSW+IAL LD+L GRDPVE +L+S +GA + + G+T ELS KW E + L G+++ N ++ALEGAL IRE +GSLV HE +VFLDV WLA+ILKPLLNH+D E G V+LGDTG ITL + IASW+RLK GVLEP +A +WP+GLS YVLPTL SLGL +PL++D AEGLVVLLRL RPE VGK +D F T WKIFLGVPPGAIEK+LTRCC LG ++TFWR+GVLV G LG +TFA+ VEYS E+ +++G++ST PW A S+ +S M +FPGL W+ +L+CPQH + ATR GDK L G+ C C+++TGG GAAAIDLL VDI+ R + EV R + +Y P R + R+ V+ +V VE F E+ G L G++ GRLD ++ D P + G SD + R K + + GV K M L +C V VPCG G+GY + R+W V + VLQV A +TA +S L ++ L +L + +LDD + D G + A+Y +L++F+ D +E VK T+ ++ F ++M +V DG + WV E+ W D A
Sbjct: 250 SALWDHTQNVQDVDHKERGHSMPGGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCR-IKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGS-DNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCF-PV----GAGEHGESSSENFLSKSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVE--MVILKSPDSDRGATETAKTTVYQ-----GITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQE-MFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVK-----------VEXXXXXXXXXXX-XXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVG-SDGTASKARGRKSM-------LSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSW----VKKISPVLQV-----AVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFM----DKEQIERVKNTR----------DGDGYIDFRDEMKRVP--DGRGGMVWVRNENVQKWLDSRSIA 1308
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 655 bits (1690), Expect = 1.460e-206 Identity = 373/740 (50.41%), Postives = 468/740 (63.24%), Query Frame = 3
Query: 1287 ALWDHGTNVSPDE-----DLLQGNFACNALPKQLEALLAKLSHLR-YGLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT-RGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYN-SKGELRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQSGGQKGAIKAVPAVNQRNQGVVGLTRA-------ELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERY 3452
ALWDH NV D++ G A+P QL LL L L L + NPW EPPE++V+KG ++RGYF DL+AE + R +KVVLVGQEGAGKTSLRQS++ + TPT EESTV DVE M++ G+++RVYDCAGQVAYTGLLQMFL+P++V +LVC+ G FGQ+ S + DQ+++D KLQ LRVCDWLRS+S +P +DVI+VATKCDL +G A + R+E A WL +W GM VR+E VSLTSCF E G + G S + WACDWR +S PSLL R++ +G LRGV +VLPRSW+IAL VL+AL GRDPVE +K+ + + + VG T EL T W E + L G+ + N ++ALEGAL IRE +GSLVRHE +VFLDV WLA+ILKPLLNH+D G V+LGDTG ITL + IASW RLK GVLEP +A +WP GLS YVLPTL SLGLT+PL+ D GLVVLLRL+ RP VG+ +D F +T S W+IFLGVPPGAIEK+LTRCC LG ++TFWR+GVLV G LG FA+ EYS E+ +++G+IST+APW ALS+ S M +FPGLRW LKCPQH + GDK L C C+ +T G GAAAIDL+ +VDI+ RG + REV R + +Y
Sbjct: 40 ALWDHTQNVQDVHHKEGGDIMPGG----AMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAE-PCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGS-DNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDAS---KQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMV-----------LLKSPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQR-TFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLE-RRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY 757
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 656 bits (1693), Expect = 2.280e-204 Identity = 451/1114 (40.48%), Postives = 587/1114 (52.69%), Query Frame = 3
Query: 1284 TALWDHGTNVSPDEDLLQGNFACNA--LPKQLEALLAKLSHLRYG-LHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTRG-PEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGE-LRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQSGGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREVHGRLVKAQERYPVLRPEAARGLHPEQAQRRYTAWWDGVKEEMGDVLRGAKGPTGGGAVESVASVASGKVAGLERSFGELAGKLEQLFGNLQQQLGQHHLDVQGRFGEMDKRFKRLVDMIDADDGVM---------------GRLD--FLVGMMMAERREGFDTPRKACVLPPWDFAETHGLSDEEQAPERWVKRVQAWREDDFKQGKGVFKTKMRLFLVCAVTHRLVPCGPNGQGYDIQRPRTWFRMSVSVATFVLQVVCATLAAITAAPLSGGGALAEESLSAALGSMESMLERQLAELSLD-DGGVDVAAGPQTAQLKAAAYTSLREFIHGIEDTACLEIVKKTKKAHRERRAPPSASEFVFFEEKMVQVQRRDGDAAVQWVLKEHESAWYD 4547
TALWDH T+ D +G + +P QL LL L G L +E NPW EPPE++V+KG ++RGYF DL+AE V R +KV+LVGQEGAGKTSLRQS++T TPT EESTV DVE M++ G+++RVYDCAGQ AYTGLLQMFL+P++V +LVC+ AFGQ+ ++ T Q+ +D KL+ELRVC+WLRS++ +PD+D I+VATKCDL G AA+ R+E A WL SW GM VR+E GV LTSC E G E W CDWR + +S P LL R++ G LRG LVLPRSW+IAL VL+AL SGRDPVE V+ G G A G G+T +L KW E + L +++ + +ALEGAL IRE +GSLVRHET+VFLDV WLA+ILKPLLNH+D+E G V+LGDTG +TL++ I SW RLK GV+EP +A LWP GLS +VLPTL SLGLT+PL++D AEGLVVLLR PE VGK +D F +H S WKIFLGVPPGAIEK+LTRCC LG +RTFWR V V G G + FA+ +EYS E+ K++G+IST PW ALS+ +S M +FPGLR R LKCPQH + + R GDK L G+ C C+++T G GAAAIDL+ +VDI+ R E+ EV R V + RY P + + + DGV + KG A+G AGL G + G ++ + E GRL+ F + R + P L P A S + +KRV + +GV K +M L +C V VPCG G+GY + R W V + VLQV A +TA A ++S L ++ L +L + SLD D + V +G + + A R ++ E V + K A ++ F +KM +V DG + WV E+ W D
Sbjct: 180 TALWDH-THYLQDIVHEEGAHGMSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAE-PCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTG-GQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTV---EGGWVCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVE---VVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEES-FDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGS-----SKGENLLIQKIDGVAIAVHGGFNEMKGE------------ANGIRAGLGDVKGXIRGGFHEMXXXXXXXXXXXXXXXEDTKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRLENVFKNTQEILMRLKNLQAPN---YLYPRLVAVEEVASGSTPSRAHGMKRV-------LSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGW----VKKISPVLQV-----AVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEE--DVDADMQNDTRASYEALKKLMDKEQVGRLKNAR-------DGDGYIDFRDKMKRVP--DGRGGMVWVRNENVQRWLD 1236
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 645 bits (1665), Expect = 1.400e-203 Identity = 369/719 (51.32%), Postives = 459/719 (63.84%), Query Frame = 3
Query: 1284 TALWDHGTN---VSPDEDLLQGNFACNALPKQLEALLAKLSHLRYG----LHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT-RGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGE-LRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQSGGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKT--FALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGR 3398
+ALWDH N + DE + + +P QL LL L ++ G L + NPW EPPE +V KG AVRGYF DL+AE + R ++KVVLVGQEGAGKTSLRQS++ TPT EESTV DVE M++ G+++RVYDCAGQVAYTGLLQMFL+P+AV +LVC+ G FGQ+ S ++ DQ+ +D KL+ELRVCDWLRS+S +P++DVI+VATKCDLA G A R+E A +WL SW G+ VR+E VSLTSCF E G + G S + + WACDWR+ PSLL R++ G LRG +VLPRSW+IAL VL+AL GRDPVE VL+ A G+T +LS KW E + L GV++ N +ALEGALLIRE +GSL+R+E ++FLDV WLA+ILKPLLNH+D E G VSLGDTG ITL + IASW RLK GVLEP +A +WP+GLS YVLP L LGLT+PL+DD A+GLVVLLRL RPE VG +D F DHT LS WKIFLGVPPGAIEK+LTRCC LG +RTFWR+GVLV G LG + FA+ +EYS E+ +++G+IST APW LS+ +S M +FPGLRWR L CPQH + + A S G GAAAIDL+ +VDI++ R
Sbjct: 105 SALWDHTQNAEDIGHDEGTQR--MSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAE-PCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESN-DQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTG---SHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVE---VVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQE-TFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLLANKA-----------------SPVAGLGAAAIDLVRMVDIRRDR 795
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 645 bits (1665), Expect = 3.290e-202 Identity = 365/719 (50.76%), Postives = 463/719 (64.39%), Query Frame = 3
Query: 1284 TALWDHGTNVSPDEDLLQGNFACN--ALPKQLEALLAKLSHLRYGLHVEKNPWQEPPEAVVSKGIPAVRGYFTDLFAEGVAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPT-RGPEESTVQIDVEQMDVNGATLRVYDCAGQVAYTGLLQMFLSPQAVSLLVCDTGAFGQRDSSLTDRDQLKKDLSKLQELRVCDWLRSLSFGIPDSDVIMVATKCDLAAGMAADAAGRIEGAIGKWLESWSGAGMTAVRVEDGVSLTSCFAPIPNEDGGAPLGKRKSPDEESTWACDWREGMYVESQPSLLQRVMYNSKGE-LRGVSLVLPRSWNIALEVLDALGSGRDPVESAQTVLQSGGQKGAIKAVPAVNQRNQGVVGLTRAELSTKWNEVIAALVGDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPCCGDVSLGDTG---ITLKEDKHIASWNRLKGHGVLEPEVARVLWPHGLSNYVLPTLDSLGLTYPLDDDSAEGLVVLLRLDETRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCKLGTLRTFWRFGVLVQGSLGGGIAAKTFALAVEYSHETCEVDMKVYGNISTAAPWAALSFGVSVFQAMCSEFPGLRWRAFLKCPQHEQNLQICKAATRLGDKLLHGTTCNLCNSETGGPGAAAIDLLEVVDIQQGRGELVREV 3419
+ALWDH NV DED +G + ++P QL LL L + L + NPW EPPE++V KG ++R YF DL+AE + R KVVLVGQEGAGK+SLRQS++ PTPT EESTV DVE M++ G+++RVYDCAGQVAYTGLLQMFL+P++V +LVC+ AFGQ+ + ++++D KL+ELRVCDWLRS+S +P +DVI+V TKCDLA G AA+ R+E A WL SW GM V++E GVS TSCF P E G ++ + WACDW + PSLL R++ G LRG +VLPRSW+ L VLD+L GRDPVE VL+ A G+T +LS KW +++ L G+ + N +ALEGAL IRE +GSLVRHET+VFLDV WLA+ILKPLLNH+D E G V+LGDTG ITL + +IASW RLK GVLEP +A +WP GLS YVLPTL SLGLT+PL+ D EG VVLLRL RP+ VG+ +D F HT LS W IFLGVPPGAIEK+LTRCC LG ++TFWR+GVLV G LG FA+ +EYS +++ +++G+I T APW ALS+ +S M +FPGLRW LKCPQH + + T+ G+ L C C++ET G GAAAIDLL +VDI+ RGE+ EV
Sbjct: 61 SALWDHTQNVQ-DEDQDKGGCGMSGGSMPGQLCRLLDVLERAKIVL--DGNPWAEPPESIVDKGRKSMRSYFEDLYAE-PCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQ-LERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCF---PAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVE---VVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQE-TFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLK-RRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEV 766 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11.679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11.679.1 >prot_E-siliculosus-1a_F_contig11.679.1 ID=prot_E-siliculosus-1a_F_contig11.679.1|Name=mRNA_E-siliculosus-1a_F_contig11.679.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1523bp MLCWEGVNTSSKKSGPIAPHGGRPQPLHQTGWRLQRTAVHNTQRIGRIKPback to top mRNA from alignment at E-siliculosus-1a_F_contig11:393..29960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11.679.1 ID=mRNA_E-siliculosus-1a_F_contig11.679.1|Name=mRNA_E-siliculosus-1a_F_contig11.679.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=29568bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11:393..29960+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11:393..29960+ >mRNA_E-siliculosus-1a_F_contig11.679.1 ID=mRNA_E-siliculosus-1a_F_contig11.679.1|Name=mRNA_E-siliculosus-1a_F_contig11.679.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=9138bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11:393..29960+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |