mRNA_E-siliculosus-1a_F_contig1099.674.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: D7FZ09_ECTSI (Pellino homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ09_ECTSI) HSP 1 Score: 1005 bits (2599), Expect = 0.000e+0 Identity = 499/520 (95.96%), Postives = 501/520 (96.35%), Query Frame = 1 Query: 1591 MASPSRNTRTKETLVKPADGNEHDDYGGGVRSTKNVPRGRCGKQVAFKTPEARPTESCGGRNPPHRARGGEGGIGGANARLPRNCGVSSGAGDSDGQNRGGRSFLLKIAQGESQSHAAGYRLQLSLSAQQREAAERAGRGRASTTQAPAETLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPSRVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMVFVQ 3150
MASPSRN RTKETLVKPAD NEHDD GG VRSTKNVPRGRC KQV FKTPEARPTESCGGRNPPHRARGGEGGIGG NARLPRNCGVSSGAGD DGQNRGGRSFLLK AQGESQSHAAGYRLQLSLSAQQREAAERAGRGRASTTQAPAETLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPS+VIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSET GASGDAAV AADGAVGAEDVGE NDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRL MPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKM+FVQ
Sbjct: 1 MASPSRNIRTKETLVKPADRNEHDDEGGSVRSTKNVPRGRCEKQVTFKTPEARPTESCGGRNPPHRARGGEGGIGGTNARLPRNCGVSSGAGDGDGQNRGGRSFLLKSAQGESQSHAAGYRLQLSLSAQQREAAERAGRGRASTTQAPAETLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPSQVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETGGASGDAAVXXXXXXXAADGAVGAEDVGERNDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLAMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMIFVQ 520
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A6H5L190_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L190_9PHAE) HSP 1 Score: 566 bits (1459), Expect = 5.480e-191 Identity = 308/410 (75.12%), Postives = 318/410 (77.56%), Query Frame = 1 Query: 1591 MASPSRNTRTKETLVKPADGNEHDDYGGGVRSTKNVPRGRCGKQVAFKTPEARPTESCGGRNPPHRARGGEGGIGGANARLPRNCGVSSGAGDSDGQNRGGRSFLLKIAQGESQSHAAGYRLQLSLSAQQREAAERAGRGRASTTQAPAETLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPSRVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTT-AADGAVGAEDVGEINDAQGDDGGTEGK 2817
MASPS NTR+KETLVK ADG+EHDD GGGVRSTK P GRCGKQVAFKTPEARPTESCGGRNPPHRARGGEGGIGG N RLPRN GV GAGD +GQ R GRSFLL+ AQGESQ+HAAGYRLQLSLSAQQREAAERAGRGRASTT+AP +TLGGAEDVVDVPCQADDGCDMFQLGRMQS ENDFAVRGPLHQ KPGGKVCGPVSRYAVRLLVDR+PPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKPEIGEWRE MLYESAEQMARLGGVQPS+VIELLN RKPQCPVQLQTLQFKPW+P AADGAVGAEDVGE NDAQG DG TE K
Sbjct: 1 MASPSHNTRSKETLVKHADGSEHDDDGGGVRSTKKQPCGRCGKQVAFKTPEARPTESCGGRNPPHRARGGEGGIGGTNTRLPRNYGVGGGAGDGNGQYREGRSFLLRSAQGESQNHAAGYRLQLSLSAQQREAAERAGRGRASTTEAPMDTLGGAEDVVDVPCQADDGCDMFQLGRMQSVENDFAVRGPLHQSKPGGKVCGPVSRYAVRLLVDRTPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKPEIGEWRE------------------------------------------MLYESAEQMARLGGVQPSQVIELLNRRKPQCPVQLQTLQFKPWQPXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGAVGAEDVGETNDAQGVDGDTEVK 368
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: F0Y998_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y998_AURAN) HSP 1 Score: 282 bits (722), Expect = 8.100e-78 Identity = 163/407 (40.05%), Postives = 214/407 (52.58%), Query Frame = 1 Query: 2098 DMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKW-------------LEDNG---------EWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESA------EQMARLG--------------------GVQPSRVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALV----PHIFPACGHVQGYAKQL----AWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQ--CKDGERPYSKMVF 3144
DMFQLGRM +NDF VRGPLH GG +CGPVSRYA RL R PP+ C ++ AGFN+ + + L E +PKW L+D G +WDA+T FG+RI KPEIG WREV+V G + RA R D G E + LT+GTI+D+ G+Q+LYESA E+ AR G P+R++ N R+PQCPVQL T++ E +D + +AL P+IFPACGHV +A +L A PCP+CRT GP VE+K W AI + P V FNPCGH S VA +W+ L +P+NAPP+A YRPICP+CAKPL+ + GE+P+++++F
Sbjct: 416 DMFQLGRMIVPQNDFVVRGPLHLDS-GGVLCGPVSRYACRLTCSRRPPYECTLYAAGFNNERDIFLSEQAPKWQLAPGERAADAPPLDDEGKDGGEPDGAQWDALTTFGVRIWKPEIGAWREVSVHGGVHEPRA--RADVAGKRFALENSTLTNGTIVDLAGIQLLYESAASMRAHERAARAGDRRELSQSGERSRQIPGDPNAAAPARIVARFNARRPQCPVQLHTIRL-------------------------------------------EYDD-------DKRRALAQDRRPYIFPACGHVHAFAPELQRVAARMPCPLCRTRGPFVELKLEWEPAICDDEPEVAFNPCGHIVSERVARKWASLALPDNAPPNARYRPICPFCAKPLKTDARAGEQPFNRILF 769
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A8J2WLA8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WLA8_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.720e-74 Identity = 154/399 (38.60%), Postives = 205/399 (51.38%), Query Frame = 1 Query: 2098 DMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWL--------------------EDNGEWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESA------EQMARLGGVQ------------------PSRVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALV----PHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQ--CKDGERPYSKMVF 3144
DMFQLGRM +NDF VRGPLH GG +CGPVSRYA ++ AGFN+ + + L E +PKW D +WDA+T FG+RI KPE+G WREV+V G + RA R D G P E + LT+GTI+D+ G+Q+L+ESA E+ AR G + P+R++ N R+PQCPVQL T++ E +D + +AL P+IFPACGHV +A +L PCP+CRT GP VE++ W AI E P V FNPCGH S VA +W+ L +P+NAPP+A YRPICP+CAKPL+ + G++PYS+++F
Sbjct: 206 DMFQLGRMIVPQNDFVVRGPLHLDA-GGVLCGPVSRYACXXXXXXXXXXXXXLYAAGFNNERDVFLSEQAPKWQLAPGERAADADDAVTDPDAEPDAAQWDALTTFGVRIWKPEVGAWREVSVHGGVHEPRA--RADVAGRRYPDEDSVLTNGTIVDLAGIQLLFESAASMRAHERAARRGSERGIGGDGRSPIPGDPRADAPARIVARFNARRPQCPVQLHTIRL-------------------------------------------EYDD-------EKRRALAQDRRPYIFPACGHVHAFAPELQRLPCPLCRTRGPFVELRLEWEPAICDEEPEVAFNPCGHIVSERVARKWAGLALPDNAPPNARYRPICPFCAKPLKTDARAGDQPYSRILF 551
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A7S3K112_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K112_9STRA) HSP 1 Score: 270 bits (691), Expect = 2.210e-73 Identity = 162/443 (36.57%), Postives = 207/443 (46.73%), Query Frame = 1 Query: 2098 DMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWL-------------------------EDNG---------------------------EWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQ------------------------------------PSRVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKAL----VPHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQ--CKDGERPYSKMVF 3144
DMFQLGRM +NDF VRGPLH GG +CGPVSRYA R+ R PP C+++ AGFN+ + + L E +PKW E NG +WDA+T FG+RI KPEIG WREV+V G + R R D G P E + LT GTIID+ G+Q+L+ESA+ M V P R++ N R+PQCPVQL T++ E ++ + KAL P+IFPACGHV YA +L PCP+CRT GP VE+K W AI E P V FNPCGH S VA +WS L +P+NAPP+A YRPICP+CAKPL+ + ++PY+K++F
Sbjct: 414 DMFQLGRMIVPQNDFVVRGPLHLDS-GGVLCGPVSRYACRITCSRLPPFHCKLYAAGFNNERDIFLSEMAPKWQLKPDEIAADDLDAIEQKEKQIQLQQEYNGTIEKNKNMNASSQMSSSQPKNKDTIGCQWDALTTFGVRIWKPEIGAWREVSVHGGVHEPRQ--RADVAGARYPDENSTLTDGTIIDLAGIQLLFESADSMRNHDTVHYKPTVPADETRPSEESVVNNEQEEHKSPSNDRYLSAPDRIVARFNARRPQCPVQLHTIRL-------------------------------------------EYDE-------EKRKALSKDRTPYIFPACGHVHAYAPELRGAPCPLCRTRGPFVELKLEWEPAICDEEPEVAFNPCGHIISERVARKWSNLALPDNAPPNARYRPICPFCAKPLKTDARHSDQPYNKILF 803
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A7S2WPP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP1_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.050e-50 Identity = 106/283 (37.46%), Postives = 159/283 (56.18%), Query Frame = 1 Query: 2329 GEWDAVTPFGIRILKPEIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGET-NE------LTSGTIIDIGGVQMLYESAEQMARLGGVQPS----RVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMVF 3144
G WDA+T FG+R+ +PE GEWREV+V GA+ + R LDT G+ P E NE +T+G+IID+ G+Q+L++SAE + + + ++I+ N R+PQCPVQ+ T++F +KP T+ A ++ + P++FPACGHV +A++L PCP+CR GP + W AI +++PT VFNPCGH S VA W+ + +P+NAPP++ YRPICP+CAK L+ ERP++ ++F
Sbjct: 25 GSWDALTTFGVRVWRPEDGEWREVSVNGAMYKPRKV--LDTAGE--PCEVMNEDQLGCQITNGSIIDLAGIQLLFQSAESVGQCAAIDADDGYRKIIDEFNRRRPQCPVQMHTIRFD-YKPGAKLNPYDSTSRALEESRTSR----------------------------------TPYVFPACGHVHAFARELKNMPCPLCRKRGPFEPLSLEWEPAICQDIPTHVFNPCGHVISERVAAYWASIPLPDNAPPNSRYRPICPFCAKALKDTQTERPFASLLF 268
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A3B3RKU9_9TELE (E3 ubiquitin-protein ligase pellino homolog 1-like n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RKU9_9TELE) HSP 1 Score: 181 bits (458), Expect = 1.150e-45 Identity = 124/397 (31.23%), Postives = 183/397 (46.10%), Query Frame = 1 Query: 2041 TLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGGKVC---------GPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKP--------EIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPSRVIEL-LNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALVPHIFPACGHVQGY------AKQLAWGP--CPMCRTPGPLVEIKFGWCSA---IDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMVF 3144
TL A+ VV V D DMFQ+GR + DF V + GG C +SR+A R++ RSPPH RI+ AGF+S K + L E + KW +G+ D +T G+ ++ P + G WRE++V G + LR G +V ET EL G++ID+ G +L+ +AE ++R ++ + L +N +PQCPV L TL F + +DV +++ Q P ++ CGHV GY A+Q G CPMCRT GP V + G C A +D PT F+PCGH S + A W ++ +P+ Y CP+CA+ L +GE+ Y +++F
Sbjct: 83 TLSRAQTVV-VEYTHDSSVDMFQVGRSTESPIDFVVMDTVPGSPAGGGSCEGGDLQTVQSTISRFACRIMCQRSPPHTARIYAAGFDSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFTEDSKPGVWREISVCGNVFTLRETRSAQQRGKMVENETQELVDGSLIDLCGATLLWRTAEGLSRTPTLKHLEALRLEINAARPQCPVGLNTLAFPSMR----------------------------------RKDV--VDEKQ------------PWVYLRCGHVHGYHDWGNRAEQAPSGQRECPMCRTRGPYVPLWLG-CEAGFYLDAAPPTHAFSPCGHVCSEKTATYWGQIPLPHGT---HTYHAACPFCAQQL---NGEQAYIRLIF 423
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A6U1Q779_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q779_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.830e-44 Identity = 87/207 (42.03%), Postives = 114/207 (55.07%), Query Frame = 1 Query: 2530 YESAEQMARLGGVQPSRVIELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWGPCPMCRTPGPLVEIKFGWCSAIDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMVFVQ 3150
+ESA M R V P +++ N RKPQCPV L T++F+ W EDV E P +FPACGHV +AK+L GPCP+CR PGP VE+K W AI R+ PTVVFNPCGH S EVA++W+ + MP+NAPP+A YRPICP+CAK L+ DG RP+++++F +
Sbjct: 1 FESAASMRRGVEVDPEQIMAGFNARKPQCPVHLHTIRFE-WN-----------------------------------EDVREALSWD----------RKPFVFPACGHVHAFAKELKRGPCPLCRKPGPFVELKLEWEPAICRQEPTVVFNPCGHLVSEEVAQQWASVHMPDNAPPNARYRPICPFCAKTLKAVDGHRPFNRIIFQE 161
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A3Q0S0M6_AMPCI (Pellino E3 ubiquitin protein ligase 1b n=7 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q0S0M6_AMPCI) HSP 1 Score: 170 bits (431), Expect = 3.530e-42 Identity = 117/397 (29.47%), Postives = 172/397 (43.32%), Query Frame = 1 Query: 2041 TLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGG---KVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKP--------EIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPSRVI-ELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWG--------------PCPMCRTPGPLVEIKFGWCSA---IDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMVF 3144
TL A+ VV V D DMFQ+GR + DF V + + V +SR+A R++ R+PP+ RI+ AGF+S K + L E + KW +G+ D +T G+ ++ P + G WRE++V G + LR G +V ET EL G++ID+ G +L+ +AE +AR ++ + + +N +PQCPV TL F + T P ++ CGHV GY WG CPMCRT GP V + G C A +D PT FNPCGH S + A WS++ +P+ + CP+CA L GE+ Y +++F
Sbjct: 78 TLSRAQTVV-VEYTHDSNTDMFQIGRSTESPIDFVVTDTVAGSQSNADTQSVQSTISRFACRIICQRTPPYTARIYAAGFDSSKSIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFSQDSKPGVWREISVCGNVFTLRETRSAQQRGKMVETETQELVDGSLIDLCGATLLWRTAEGLARTPTLKHLEALRQEINAARPQCPVGFNTLAFPSMRRKDTP------------------------------------------------DEKQPWVYLQCGHVHGYHN---WGNHXXXXXXXXXRLRECPMCRTKGPYVPLWLG-CEAGFYVDAAPPTHAFNPCGHVCSEKTAAFWSQIPLPHGT---HTFHAACPFCAHQLS---GEQGYIRLIF 415
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Match: A0A3Q2WYG5_HAPBU (E3 ubiquitin-protein ligase pellino homolog 1 n=11 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3Q2WYG5_HAPBU) HSP 1 Score: 169 bits (429), Expect = 7.370e-42 Identity = 116/397 (29.22%), Postives = 173/397 (43.58%), Query Frame = 1 Query: 2041 TLGGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGG---KVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSRKCLTLPESSPKWLEDNGEWDAVTPFGIRILKP--------EIGEWREVTVAGAIRRLRAAGRLDTIGDLVPGETNELTSGTIIDIGGVQMLYESAEQMARLGGVQPSRVI-ELLNDRKPQCPVQLQTLQFKPWKPPPTSWTSSETAGASGDAAVAMAATTTAADGAVGAEDVGEINDAQGDDGGTEGKALVPHIFPACGHVQGYAKQLAWG--------------PCPMCRTPGPLVEIKFGWCSA---IDREVPTVVFNPCGHAASLEVAERWSRLVMPNNAPPDAVYRPICPYCAKPLQCKDGERPYSKMVF 3144
TL A+ VV V D DMFQ+GR + DF V + + V +SR+A R++ R+PP+ RI+ AGF+S K + L E + KW +G+ D +T G+ ++ P + G WRE++V G + LR G +V E+ EL G++ID+ G +L+ +AE +AR ++ + + +N +PQCPV TL F + T P ++ CGHV GY WG CPMCRT GP V + G C A +D PT FNPCGH S + A WS++ +P+ + CP+CA+ L GE+ Y +++F
Sbjct: 84 TLSRAQTVV-VEYTHDSNTDMFQIGRSTESPIDFVVTDTVAGSQSNADTQSVQSTISRFACRIMCQRTPPYTARIYAAGFDSSKSIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFSQDSKPGVWREISVCGNVFTLRETRSAQQRGKMVETESQELVDGSLIDLCGATLLWRTAEGLARTPTLKHLEALRQEINAARPQCPVGFNTLAFPSMRRKDTP------------------------------------------------DEKQPWVYLQCGHVHGYHN---WGNHXXXXXXXXXRLRECPMCRTKGPYVALWLG-CEAGFYVDAAPPTHAFNPCGHVCSEKTAAFWSQIPLPHGT---HTFHAACPFCAQQLS---GEQGYVRLIF 421 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1099.674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1099.674.1 >prot_E-siliculosus-1a_F_contig1099.674.1 ID=prot_E-siliculosus-1a_F_contig1099.674.1|Name=mRNA_E-siliculosus-1a_F_contig1099.674.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1051bp MRWCFGRCTATPFFSRKTPDATAVDVVAPSNRTSTTTSLHDDGGIYDHHVback to top mRNA from alignment at E-siliculosus-1a_F_contig1099:6130..14170+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1099.674.1 ID=mRNA_E-siliculosus-1a_F_contig1099.674.1|Name=mRNA_E-siliculosus-1a_F_contig1099.674.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8041bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1099:6130..14170+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1099:6130..14170+ >mRNA_E-siliculosus-1a_F_contig1099.674.1 ID=mRNA_E-siliculosus-1a_F_contig1099.674.1|Name=mRNA_E-siliculosus-1a_F_contig1099.674.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6306bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1099:6130..14170+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |