mRNA_E-siliculosus-1a_F_contig10965.665.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: D8LJP9_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP9_ECTSI) HSP 1 Score: 269 bits (688), Expect = 2.470e-91 Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 1 Query: 1 MHPAQQVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 408 MHPAQQVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRA +VWHRESEHFPG QGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE Sbjct: 1 MHPAQQVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRACVVWHRESEHFPGFQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 136
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: D8LJQ4_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ4_ECTSI) HSP 1 Score: 186 bits (473), Expect = 3.070e-58 Identity = 85/131 (64.89%), Postives = 107/131 (81.68%), Query Frame = 1 Query: 16 QVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 408 +V CFLDNPGVLMYGMMCV+YTT MWLLLASYL LPVS T +TI +++GMT+ YGG +VW +ES+ FP ++GV AI + W+LSPI +G+ S LVFL +R FVLRSP+AF RSFWVFP+LVM+ + +DGE Sbjct: 28 KVECFLDNPGVLMYGMMCVVYTTGMWLLLASYLALPVSTTHATIGAMIGMTVVYGGAGCVVWFQESDSFPYVKGVAAIAVSWVLSPIFSGIVSLLVFLTVRAFVLRSPNAFGRSFWVFPILVMVAITVDGE 158
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.670e-53 Identity = 87/128 (67.97%), Postives = 106/128 (82.81%), Query Frame = 1 Query: 19 VSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALD 402 V CFLDNPG+LMYGMMCV+YTT MWLLLASYLELPVS T STI +I+GM +AY G +VW++ES+ FP +GV AI + W+LSPI +GVAS LVFL +R FVLRSP+AF RSFWVFPVLVM+ +A++ Sbjct: 50 VECFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVLVMVTIAVN 177
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 152 bits (385), Expect = 2.440e-41 Identity = 70/128 (54.69%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 19 VSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALD 402 + CF DNPG+LMYG MCV+YT +WLLLAS+ ELPVS T STI IVGMT+ Y G +VW+ E++HFP I+GV AI++ W L P+++GV + L+F +R VLRS HA RS VFP+LV + +A++ Sbjct: 90 IECFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAIE 217
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE) HSP 1 Score: 150 bits (380), Expect = 5.040e-41 Identity = 69/131 (52.67%), Postives = 96/131 (73.28%), Query Frame = 1 Query: 16 QVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 408 ++ CF DNPG+LMYG MCV+YTT +WLLLASY ELPVS T STI IVGM + Y G +VW+ E++ FP ++G+ AI+ W+LSP+++ V + +FL +RTFVLRSP + +R+ VFP LV +A++G Sbjct: 4 KIECFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVNGN 134
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 144 bits (363), Expect = 3.590e-38 Identity = 68/128 (53.12%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 19 VSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALD 402 + CF DNPG+LMYG MCV+YTT +WLLLAS+ ELPVS T ST+ IVGM + Y G +VW+ E++ FP ++GV AI+ W LSP+ + V + +FL +RTFVLRSP A +R+ VFP LV +A++ Sbjct: 89 IECFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVN 216
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 142 bits (357), Expect = 2.650e-37 Identity = 66/126 (52.38%), Postives = 92/126 (73.02%), Query Frame = 1 Query: 25 CFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALD 402 CF DNPG+LMYG MCV+YTT WLLLAS+ ELPVS T STI IVGM + Y G +VW+ +++ FP ++G+ AI+ W+LSP+++ V + +FL +RTFVLRSP + +R+ VFP LV +A++ Sbjct: 92 CFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVN 217
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 2.220e-36 Identity = 62/129 (48.06%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 16 QVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALD 402 QV CF+DNPG+LMYG MCV+YT+ WLLLAS+ ELPVS T +T+ IVGM + Y G +VW+ E+E FP ++GV AI+ W LSP+++ V + ++ +RTFVLR+ + +++ +FP LV + +A++ Sbjct: 96 QVGCFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVN 224
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: A0A6V1T0D7_HETAK (Phosphate transporter n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T0D7_HETAK) HSP 1 Score: 134 bits (336), Expect = 2.920e-34 Identity = 55/127 (43.31%), Postives = 95/127 (74.80%), Query Frame = 1 Query: 19 VSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVAL 399 + CF+D+ VLMYGMMCV++ T +WLL+A++ ++PVS T S + I+GMT+A G + +VWH++++ FP ++GV AI++ W+LSP+ +GV + +++L +RTF+LRS +++ R+F +P L+ + L Sbjct: 88 IDCFIDDGPVLMYGMMCVIFCTGLWLLIATFFQMPVSTTHSVVGGIIGMTIAAKGGSCVVWHKDTDQFPFVKGVSAIVVSWILSPLFSGVGAAILYLFVRTFILRSENSYTRAFIFYPFLLASAITL 214
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Match: A0A7R9T173_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T173_9CHLO) HSP 1 Score: 125 bits (314), Expect = 1.510e-33 Identity = 58/126 (46.03%), Postives = 91/126 (72.22%), Query Frame = 1 Query: 25 CFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRAYIVWHRESEHFPGIQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALD 402 CF D+PG+LMYG +CV+++ A+WL++AS+LE+PVS T S + ++GMT+ G + +VW +S+ FP I+GV AI++ WLLSPIV+G S + FL LR V+RS +++ R+ FPVL+ + ++ Sbjct: 17 CFNDDPGLLMYGCLCVIFSVAIWLVVASFLEMPVSTTHSCVGGMIGMTMVARGSSCVVWSAKSDTFPYIKGVAAIVVSWLLSPIVSGGFSFVFFLTLRALVMRSQNSYARARLAFPVLLACTLIIN 142 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10965.665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10965.665.1 >prot_E-siliculosus-1a_F_contig10965.665.1 ID=prot_E-siliculosus-1a_F_contig10965.665.1|Name=mRNA_E-siliculosus-1a_F_contig10965.665.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=137bp MHPAQQVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISback to top mRNA from alignment at E-siliculosus-1a_F_contig10965:1119..1813+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10965.665.1 ID=mRNA_E-siliculosus-1a_F_contig10965.665.1|Name=mRNA_E-siliculosus-1a_F_contig10965.665.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=695bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10965:1119..1813+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10965:1119..1813+ >mRNA_E-siliculosus-1a_F_contig10965.665.1 ID=mRNA_E-siliculosus-1a_F_contig10965.665.1|Name=mRNA_E-siliculosus-1a_F_contig10965.665.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10965:1119..1813+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |