mRNA_E-siliculosus-1a_F_contig1096.664.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A6H5KK73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK73_9PHAE) HSP 1 Score: 1485 bits (3844), Expect = 0.000e+0 Identity = 802/857 (93.58%), Postives = 813/857 (94.87%), Query Frame = 2 Query: 461 MVFVDPKLRRKYGHEGEKGRHKRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGVPQRPPRVVLTGRGGGSASCSLAARDLGNSKDGRVSRGGAALCDPDTFASAWNLVAGRHFPRRGTSRGGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVTVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPRVDIVVVYEPSPTNGGXXXXXXXXXX----HTEAQLEALLSSISEAHYLGDSVGITIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPADLVGGSASLATLALRSWMPRGDNEDDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAAVPKPSASDRRPGATAGSRGGVCVPGDARGEAGGGTWLMPAGHWRAAQARCLRNKDGFEGGXXXXXXPGTGCESTGYPQPSERVLCPIVTEPGEALVGRTGADGALLDGSPRGLMENGDALASFVERVLFP 3019
MVFVDPKLRR YGHEGEKGRHKRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSAT+AMSDTTIILN WTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKF G GGGL FVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVET WVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDV+W MQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPT XXXXXXXXXXXXXXXXXXXXXXXXXXX SGVGVPQRPPRVVLTGRGGGSASCSLAARDLGNSKDGR S GGA LCDPDTFASAWNLVAGRHFPR+GTSR GGSGGRDHVLMVDLALGLAGAVSTVKPLAIV+VAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRP+VDIVVVYE XXXXXXXXXX HTEAQLEALL+SISEAHYLGDSVG+TIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPADLVGGSAS ATLALRSWMPRGD E+DSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAA PK S SDR+P A AGSRGGVCVPGDARG+AGGGTWLMPAGHWRAAQARCLRNKDGFEGG PGTGCEST YPQPSERVLCPIVTEPGEALVGRTGADGALLDG P+ LMENGDALASFVERVLFP
Sbjct: 1 MVFVDPKLRRTYGHEGEKGRHKRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATNAMSDTTIILNHWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFGGDRGGGLFFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETGWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVNWKMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---SGVGVPQRPPRVVLTGRGGGSASCSLAARDLGNSKDGRASGGGATLCDPDTFASAWNLVAGRHFPRQGTSRSGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVSVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPQVDIVVVYEXXXXXXXXXXXXXXXXXXXXXHTEAQLEALLNSISEAHYLGDSVGMTIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPADLVGGSASPATLALRSWMPRGDKEEDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAAAPKRSVSDRQPAAAAGSRGGVCVPGDARGKAGGGTWLMPAGHWRAAQARCLRNKDGFEGGGGGR--PGTGCESTIYPQPSERVLCPIVTEPGEALVGRTGADGALLDGWPKDLMENGDALASFVERVLFP 852
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: D8LCA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA3_ECTSI) HSP 1 Score: 1156 bits (2990), Expect = 0.000e+0 Identity = 626/658 (95.14%), Postives = 632/658 (96.05%), Query Frame = 2 Query: 1049 MPGVKTTEKYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGVPQRPPRVVLTGRGGGSASCSLAARDLGNSKDGRVSRGGAALCDPDTFASAWNLVAGRHFPRRGTSRGGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVTVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPRVDIVVVYEPSPTNGGXXXXXXXXXXHTEAQLEALLSSISEAHYLGDSVGITIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPADLVGGSASLATLALRSWMPRGDNEDDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAAVPKPSASDRRPGATA-GSRGGVCVPGDARGEAGGGTWLMPAGHWRAAQARCLRNKDGFEGGXXXXXXPGTGCESTGYPQPSERVLCPIVTEPGEALVGRTGADGALLDGSPRGLMENGDALASFVERVLFP 3019
MPGVKTTEKYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPT XXXXXXXXXXXXXXXXXXXXX GVGVPQRPPRVVLTGRGGGSASCSLAARDLGN+KDGRVSRGGA LCDPDTFASAWNLVAGRHFPR+GTSRGGGSGGRDHVLMVDLALGLAGAVSTVKPLAIV+VAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPRVDIVVVYEPSPTNGGXXXXXXXXXXHTEAQLEALL+SISEAHYLGDSVG+TIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPADLVGGSAS ATLALRSWMPRGD+EDDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAA PKPSASDRRP A A GSRGGVCVPGDA GEAGGGTWLMPAGHWRAAQARCLRNKDGFEGG PGTGCESTGYPQPSERVLCPIVTEPGEALVGRTGADGALLDG PRGLMENGDALASFVERVLFP
Sbjct: 1 MPGVKTTEKYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPTXXXXXXXXXXXXXXXXXXXXXX-----------GVGVPQRPPRVVLTGRGGGSASCSLAARDLGNTKDGRVSRGGATLCDPDTFASAWNLVAGRHFPRQGTSRGGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVSVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPRVDIVVVYEPSPTNGGXXXXXXXXXXHTEAQLEALLNSISEAHYLGDSVGVTIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPADLVGGSASPATLALRSWMPRGDDEDDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAAAPKPSASDRRPAAAAAGSRGGVCVPGDAGGEAGGGTWLMPAGHWRAAQARCLRNKDGFEGGGGG---PGTGCESTGYPQPSERVLCPIVTEPGEALVGRTGADGALLDGWPRGLMENGDALASFVERVLFP 644
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A7S2Y3B8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3B8_9STRA) HSP 1 Score: 310 bits (793), Expect = 3.580e-88 Identity = 176/365 (48.22%), Postives = 228/365 (62.47%), Query Frame = 2 Query: 491 KYGHEGEKGRHKRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYY-SYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEY-FMSLRYASRP-------RPLLLVVDGAFDAQALRALFLVL 1558
KY E+ K L E DM + L+ L+ MPS +D S+TT+ILN W R +L+ QLDA+L V PA VWVCAFNSP+E Y+ VV +YR FA LSF+ASSFNFKYYGRFQ+AL+A+T+YVW++DDD++PG FL L H AGI + GA ALGS+GWIMP + T +Y+ SYR TD+GGL+ PD R+ I L E DLLCS WF++ D VKLLFRE+W T QTGEDY LAYSLR++A S+++PMDL D TWGNVD+ G ATT + + +R+ +WH L RGG+Y F+ R R +L+V+DGA A+A+ L + L
Sbjct: 61 KYAQTRERHNVKTKLLQETRDMQTHQ----YNLRDLLQMPSDFDYK--RRFSNTTVILNHWKRNSLSVQLDAMLAQNVRPAA-VWVCAFNSPQEKYYQKVVNNYRQSFANASVE-LSFIASSFNFKYYGRFQLALRAKTRYVWIVDDDIIPGPKFLAALTHTAGIKQFRGA-------ALGSIGWIMPKLVETSRYFPSYRTPTDRGGLYFPDLRWDIKSDILYEADLLCSQWFLQVDSVKLLFRERWVTYQTGEDYFLAYSLRRYANAPSYIMPMDLEDPATWGNVDIVNGFA--SGNATTTGTMIDVRNDLWHGLVARGGKYQFLLQRQKLREGDQGDGRTSVLVVIDGAGQAKAMDKLMMAL 408
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A7S3XR94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR94_HETAK) HSP 1 Score: 270 bits (690), Expect = 9.320e-77 Identity = 158/325 (48.62%), Postives = 197/325 (60.62%), Query Frame = 2 Query: 575 PLLTLQQLMAMPSSYDPSATH--AMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTE-KYYSYRYHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRP--------LLLVVDG 1516
P TL +L+A+PS+ A S TT+ILN W R +L QL A+ T+ P VWVC FNS R YRA+V+ Y+++F L V S FNFKY+GRFQ ALQA TKYVW+IDDD++PG FL LNH+ GI + +GA GS+GW+MP + + SYR KGGL+ PD RY + L DLLCS WF+ETD V+LLFRE W T +T EDY LAYS+RK A + S+VLPMDL DS TWGNVD+ +Q ATT V +R +W RL +RGG+YF R RPRP LLLV+D
Sbjct: 4 PNYTLPELLALPSAGPLRAKQNGGRSPTTVILNHWKRESLELQLQALAGQTLRPEQ-VWVCLFNSDRVEYYRAIVDRYKAEFDNQ----LYMVISEFNFKYFGRFQFALQASTKYVWIIDDDILPGARFLEILNHVGGIKDLKGA--------FGSIGWLMPHFTEPKLELPSYRDPGLKGGLYFPDMRYRVASQALMAADLLCSQWFLETDSVRLLFREPWVTFETAEDYHLAYSMRKFADLPSYVLPMDLTDSRTWGNVDLQQTLQAVA--ATTTMDMVHVRMALWRRLAQRGGDYFWLRR---RPRPPVIENVGRLLLVIDS 310
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A2K1KTG8_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KTG8_PHYPA) HSP 1 Score: 216 bits (551), Expect = 1.100e-54 Identity = 205/700 (29.29%), Postives = 308/700 (44.00%), Query Frame = 2 Query: 533 LFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQA-RTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYR-YHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRP--LLLVVDGAFDAQALRALFLVLQDSYPPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGVPQRPPRVVLTGRGGGSASCSLAARDLGNSKDGRVSRGGAALCDPDTFASAWNLVAGRHFPRRGTSRGGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVTVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPRVDIVVVYEPSPTNGGXXXXXXXXXXHTEAQLEALLSSISEAHYLGDSVGITIAVASGPVPDSV-GDESFPWPRGRKTVRGGSLFPSKPADLVGGSASLATLALRSWMPRGDNEDDSFVVVLEADRVVSPLFYSWLKVAVLETSY 2617
LF EV + K R TL +LMA+PSS A + T+I+N + R TL QLDA+L T HP +WV AF SP++ + R++VE+Y ++FV S+++FKYYGRFQ+ALQ +V+++DDD++PG+ + + HI GA LGS+G I+P + + SYR + + + G++LPD Y I V + +VD L S WF+ D ++ LF E+ T TGED L+Y L+K+ S+V+P+D + ETWG D + + + + V +RD W R RG +++ A P+ ++ D + +AL L L + + P + V +TG S C AA LG S A C F +F RG SR D + ++ + G + P I+T PS + EA+ + +V LP SA +LW+ + A W+ ++ I ++ + P A L LL+S++ AHYLGD +GIT + S +++ +F WP G KTV K + GG L SW P D D F ++LE D VSP +Y WLK A+L Y
Sbjct: 130 LFNEVMSFQQ-KSRGCETLDELMALPSS------SAGAKVTVIVNHYQRKTLCAQLDALLEQT-HPFHNLWVLAFGSPQQDQLRSIVETYNDSR-------ITFVGSTYDFKYYGRFQLALQTVGADFVYMLDDDMIPGKRMIEIMAHI-------GATDKYRNSVLGSIGRILPFRQKDFTFPSYRKFGSKEAGIYLPDPAYNIVVDRIVQVDFLSSSWFISADLIRSLFIERPFTFVTGEDLHLSYLLQKYMNGGSYVVPVDPRNKETWG--DSEHRLAYVSETTVIHKDIVQVRDNQWWRTMSRG---YVTQWAAMNPQKSDVIFYADTLDEVRALAPLILKFRAT-----------------------------------------PGKKAFVAVTGAP--SCPCEEAATILGWSP---------ASCHERRFKIF-------NFEIRGDSRDKTK--LDPSFINEVFASMKGLMRIHGPSLIMTTNTIAPS-------------VREALTLAVRTINATLVELPP--SAVPYSLWIPDIRSVALHYWNNIKISISIITQTRP-----------------ASLRRLLNSLTNAHYLGDKIGITFNMDSKVDSETLLAIHAFNWPHGPKTV--------KRRIIQGG---LIRAVSESWYPASD---DDFGLLLEDDIEVSPFYYMWLKYALLAYHY 695
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A822YAI6_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822YAI6_NELNU) HSP 1 Score: 197 bits (501), Expect = 4.360e-51 Identity = 123/311 (39.55%), Postives = 177/311 (56.91%), Query Frame = 2 Query: 524 KRHLFMEVHDM-AKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYR-YHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRG 1450
KR L+ EV + +K G TL QLMAM S +D + + T+ILN + R TL QL+++L+ T+ P VWV +F SP+E + +VESY +SF++SS++FKYYGRFQMALQ V+++DDD++PG+ L L+H+AGI + + + LGS+G I+P + + SYR + + + GL+LPD YGI V + +VD L S WF+ + VK LF E T TGED L+Y L+K+ SFVLP+D D ETWG D + + + + V +RD W R G
Sbjct: 137 KRELYNEVLEFQSKTIGTE--TLSQLMAMSSKWDMRGPN-IPKITVILNHFKRKTLCSQLNSLLQQTL-PFHSVWVLSFGSPKELSLKRIVESYNDSR-------ISFISSSYDFKYYGRFQMALQTEADLVYILDDDMIPGKKMLQILSHVAGIDKYKNS-------VLGSIGRILPFRQKDYTFPSYRKFRSKEAGLYLPDPAYGIIVDRIVQVDFLSSSWFLSAELVKTLFIETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWG--DSEHRLAYVSETTVIFKDIVQVRDDQWWRALSTG 427
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A1D1YE56_9ARAE (Alanine--tRNA ligase n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YE56_9ARAE) HSP 1 Score: 200 bits (508), Expect = 3.320e-49 Identity = 124/312 (39.74%), Postives = 175/312 (56.09%), Query Frame = 2 Query: 518 RHKRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYR-YHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRG 1450
R KR L+ EV D + + TL +LMAM S + S+ + ++ T+ILN + R TL QLD++L TV P VWV +F SP E R +VESY +SFV+SS++FKYYGRFQMALQ+ +V+++DDD++PG+ L L+H+ G + + LGS+G I+P + + SYR + + + GL+LPD Y I V + +VD L S WF+ T VK LF E T TGED L+Y L+K+ SFVLP+D D ETWG D + + + + V +RD W R G
Sbjct: 128 RFKRELYDEVLDFQR-RDSGTETLPELMAMKSRWS-SSDNKLAKITVILNHFKRKTLCAQLDSLLHQTV-PFHDVWVLSFGSPNEGSLRRIVESYNDSR-------ISFVSSSYDFKYYGRFQMALQSEADFVYILDDDMIPGKRMLEILSHVGGTDKYHNS-------VLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIAVDRIVQVDFLSSSWFLSTHLVKTLFVETPFTWMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWG--DSEHRLAYVSETTVIFKDIVQVRDEQWWRALSTG 420
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A1J3I729_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I729_NOCCA) HSP 1 Score: 187 bits (476), Expect = 9.150e-49 Identity = 118/310 (38.06%), Postives = 170/310 (54.84%), Query Frame = 2 Query: 524 KRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYR-YHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRG 1450
KR L+ +V K K +L++LM M S + + T+ILN + R TL QLD++L T+ P VWV AF SP EA R + SY +SF++S+++FKYYGRFQ+ALQ V+VIDDD++PG+ L L+H+AG + E + LGS+G I+P + + SYR + + + GL+LPD Y I + + +VD L S WF+ + VK LF EK T TGED L+Y L+K+ SFVLP+D D ETWG D + + + ++ V +RD W + G
Sbjct: 49 KRELYEDVLGFQK-KNLGSESLEELMKMKSKWALNGP-TKPKVTVILNHFKRKTLCAQLDSLLHQTL-PFHHVWVLAFGSPNEASLRRIAGSYNDSR-------ISFISSNYDFKYYGRFQIALQTEADLVYVIDDDMIPGKKMLQMLSHVAGTEKYENS-------VLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITLDRILQVDFLSSSWFLSAELVKALFIEKPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWG--DSEHRLAYVSETTVIFKNIVEVRDNQWWKALSTG 339
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: W9QUG5_9ROSA (Uncharacterized protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QUG5_9ROSA) HSP 1 Score: 199 bits (505), Expect = 1.030e-48 Identity = 122/310 (39.35%), Postives = 170/310 (54.84%), Query Frame = 2 Query: 524 KRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYR-YHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRG 1450
KR L+ EV D K TL QLMAM S +D + T+ILN + R TL QLD++L T+ P VWV +F SP E + +VESY +SF++SS++FKYYGRFQMALQ V+++DDD++PG+ L L+H+AG + A LGS+G I+P + + SYR + + + GL+LPD Y I V + +VD L S WF+ D V+ LF E T TGED L+Y+L+K+ SFVLP+D D ETWG D + + + + V +RD W + G
Sbjct: 180 KRELYNEVLDFQS-KSVGTETLAQLMAMKSKWDLRGPNYRPKVTVILNHFKRKTLCAQLDSLLHQTL-PFHHVWVLSFGSPNEMSLKRIVESYNDSR-------ISFISSSYDFKYYGRFQMALQTEADLVYILDDDMIPGKTMLQILSHVAGTEKYHNA-------VLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVRTLFTETPFTFATGEDLHLSYTLQKYRNAGSFVLPVDANDKETWG--DSEHRLAYVSETTVIFKDVVQVRDDQWWKALSTG 471
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Match: A0A2P5DU09_PARAD (Nucleotide-diphospho-sugar transferase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5DU09_PARAD) HSP 1 Score: 198 bits (503), Expect = 1.520e-48 Identity = 122/310 (39.35%), Postives = 172/310 (55.48%), Query Frame = 2 Query: 524 KRHLFMEVHDMAKVKGRPLLTLQQLMAMPSSYDPSATHAMSDTTIILNQWTRTTLTEQLDAVLRLTVHPAGGVWVCAFNSPREAEYRAVVESYRSKFAGGGGGGLSFVASSFNFKYYGRFQMALQARTKYVWVIDDDVMPGRHFLHQLNHIAGIYEAEGADGTIGPMALGSVGWIMPGVKTTEKYYSYR-YHTDKGGLFLPDKRYGIPVPHLQEVDLLCSHWFVETDWVKLLFREKWETPQTGEDYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRG 1450
KR L+ EV D + K TL QL+AM S +D T+ILN + R TL QLD++L T+ P VWV +F SP +A +R +VESY +SFV+SS++FKYYGRFQMALQ + V+++DDD++PG+ L L+H+AG + A LGS+G I+P + + SYR + + + GL+LPD Y I V + +VD L S WF+ + V+ LF E T TGED L+Y L+K+ SFVLP+D D ETWG D + + + + V +RD W + G
Sbjct: 145 KRELYAEVMDF-QAKNLGSETLAQLLAMKSKWDIRVNPTRPRITVILNHFKRRTLCAQLDSLLHQTL-PFHRVWVLSFGSPNDASFRMIVESYNDTR-------ISFVSSSYDFKYYGRFQMALQTGSDLVYILDDDMIPGKKMLQILSHVAGTDKYSNA-------VLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVRTLFIENPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWG--DSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTG 436 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1096.664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1096.664.1 >prot_E-siliculosus-1a_F_contig1096.664.1 ID=prot_E-siliculosus-1a_F_contig1096.664.1|Name=mRNA_E-siliculosus-1a_F_contig1096.664.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=964bp MMVRRLLLRCRRPGRTFGGGRKRGRSPAFLKLALMATVVLGVVLTLLLGVback to top mRNA from alignment at E-siliculosus-1a_F_contig1096:26406..36117+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1096.664.1 ID=mRNA_E-siliculosus-1a_F_contig1096.664.1|Name=mRNA_E-siliculosus-1a_F_contig1096.664.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9712bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1096:26406..36117+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1096:26406..36117+ >mRNA_E-siliculosus-1a_F_contig1096.664.1 ID=mRNA_E-siliculosus-1a_F_contig1096.664.1|Name=mRNA_E-siliculosus-1a_F_contig1096.664.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5784bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1096:26406..36117+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |