mRNA_E-siliculosus-1a_F_contig1096.662.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1096.662.1
Unique NamemRNA_E-siliculosus-1a_F_contig1096.662.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: D8LCA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA5_ECTSI)

HSP 1 Score: 1197 bits (3098), Expect = 0.000e+0
Identity = 594/624 (95.19%), Postives = 603/624 (96.63%), Query Frame = 1 
Query:    1 MPLNRIRRAVGVLSLLSAEVAHQPAFGADAAWGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTEVEHAVGLLNPISIEYHQEQAGYIPNGCETGCEINAYWQLYKMKAVYRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHRQACVEMFPPHDYRTEGGSEATADDSGEGKNARLVGGEPGGGRELRDGGRGGGEDEQRQPVPTVHHRRDRGEAAWAGAAGGTAPAKTLSFKEATRRVEGVNGNLSDLLGAMRIHVSPTQERLDYYVAHHYPFHHVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDAAAAADGKEDGSPRGPGERRGPAFDRFADEEGKREAASSSSQVYDDGEGTGGRGGGVEDIEENVLVLKTTADEEEGLQAAVDCSLIESLHDVWVSLLDNKFEPSEEICRGPAGPCLHTATPKEAS 1872
            MPL RIRRAVGV+SLLSAEVAHQPAFGADAA GTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQ+TEVEHAVGLLNP+SIEYHQEQAGYIPNGCETGCEINAYWQLYKMKAV+RMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPR FAQSIFGAVSLCYDC+ALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHR ACVEMFPPHDYRTEGGSEATADDSGEGKNARLVGGEPGGGRELRDGGRGG EDEQRQP PTVH  RD GEAAWAGAA GTA AKTLSF+EATRRVEGVNGNLSDLLGAMRIHVSP QERL+YYVAHHYPFH VNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDAAA ADGKE GSPRGPGERRG  FD FADEEG+RE ASSSSQVYDDGEGTGGRGG VEDIEENVLVLKTTADEEEGLQAAV+CSLIE LHDVWVSLLDNKFEPSEEICRGPAGPCLHTATPKEAS
Sbjct:    1 MPLTRIRRAVGVVSLLSAEVAHQPAFGADAASGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGLLNPLSIEYHQEQAGYIPNGCETGCEINAYWQLYKMKAVFRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRMFAQSIFGAVSLCYDCKALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHRHACVEMFPPHDYRTEGGSEATADDSGEGKNARLVGGEPGGGRELRDGGRGGREDEQRQPAPTVHRSRDGGEAAWAGAADGTAAAKTLSFEEATRRVEGVNGNLSDLLGAMRIHVSPMQERLEYYVAHHYPFHQVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDAAATADGKEGGSPRGPGERRGHTFDLFADEEGQREVASSSSQVYDDGEGTGGRGGDVEDIEENVLVLKTTADEEEGLQAAVNCSLIEPLHDVWVSLLDNKFEPSEEICRGPAGPCLHTATPKEAS 624
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.760e-37
Identity = 105/325 (32.31%), Postives = 150/325 (46.15%), Query Frame = 1 
Query:  121 VLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTEVEHAVGLLNPISIEYHQEQAGYIPNGC------------------------ETGCEINAYWQLYKMKAVYRMM--EEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRES---KVPAQVEGLLRVALRRGHGHGAVPFGYYE-FPVAIVRSNEGGVCEV-LHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHRQACVEMFP 999
            + +SG +RSFV P VH S + NLIE ++ D C VDVF +++ ED V +  +  + E        TP  ++VE A+ +L P  + +HQ+QAG IPNGC                              + YWQLYK  A YRM   EE    +G +Y WVIR RLD+AW  P+PPL  F    V+ G +++P+SD F L PR+F+   F AV   Y C        S   +      G     L R      +P+ +Y  F   I R   GGVC++    +   C +L     + P  +         CL+ +  +    C  +FP
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPE-------FTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSR------DHCLEALAEYSDLRCRTLFP 312
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: A0A7S2B5B2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B5B2_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.140e-20
Identity = 87/307 (28.34%), Postives = 129/307 (42.02%), Query Frame = 1 
Query:  109 CRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTEVEHAVGLLNP----ISIEYHQEQAGY-IPNGCETGCEIN-AYWQLYKMKA-VYRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGG---VCEVLHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHRQACVEMF 996
            C   V  SG +RS + P V   H    +E L  + C  ++  H+S   +    +    FE  +         T++E  +  LN     +   Y  + A Y +PN C +G     AY Q YK+ A ++  +   E   G  YTW++RSR D+ W+LP PP+    PTRV+  +N++PL D F + PR+ + + F A++  Y C           P  + G   + L +     +VPF Y +    IVR          E L P  L C           L  +T   Q  SC D  N     AC   F
Sbjct:   99 CLIGVCLSGTMRSMITPSVQ-RHFMAAMEHLAGETCEFELLAHVSTGAKDAATHASNSFEANM---------TQIETTLHALNATGKLVHTTYFDDDAHYAVPNSCPSGDPPPMAYHQAYKVAACLHACVLPREKALGRRYTWLVRSRYDLGWVLPPPPVETLNPTRVHVPYNYWPLFDGFAVVPRQLSDAYFTAINTYYRCYEGSEAPVVWFPPSL-GASDMLLTKHLVEHSVPFSYVDVTTVIVRLRRKAREWCGEQLRPFLLQC-----------LFTSTAEDQARSCQDHNNLGASCACERKF 383
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.380e-18
Identity = 86/299 (28.76%), Postives = 118/299 (39.46%), Query Frame = 1 
Query:   28 VGVLSLLSAEVAHQPAFGADAAWGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTE----VEHAVGLLNPISIEYHQEQAGYIPNGCE-------TG----------CEINA-------------------------------------------YWQLYKMKAVYRMM------EEHEATT-------GLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDC 690
            +G +S+ S E    P   A+       C  AV  SG VRSFV P VHLS +++++E ++ + C VDVF++ S+ DE           D L       QD E    +E  +  L+P  + +HQEQAG IPN C        TG             NA                                           YWQLY+  A YR+       +E EA T          Y W++ +R D+AW   VP L  F    V+     +P+S  F L PR F+   F AV   + C
Sbjct:   15 LGCISVASCEFNQDPTTAAE----IPPCAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDE-----------DLLE-----EQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSKEPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHAC 293
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.120e-17
Identity = 83/301 (27.57%), Postives = 125/301 (41.53%), Query Frame = 1 
Query:  103 ESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTEVEHA--------VGLL---NPISIEYHQEQAGY-------IPNGCETG----CE-----------INAYW-QLYKMKAVYRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYD--CQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASG 897
            E CR AV  SG  R+F  P V  +  +NL+  LE  C VD+F+ I   D+V  R R   F    A         EV  A        V L+    P+     Q  A Y        P  C  G    C            + A W  L  + +   ++   E      Y WVIR+R D+++++P+PPL+      V+  ++  P+SD F + PR +  + F A  LC+   C    A    K     E +L  ALR        P   +++P++IVR+     C+ L   ++ C ++ A G
Sbjct:  474 EVCRVAVCMSGQWRTFAHPLVRQTFHQNLLGALETSCEVDLFLCIKPSDQVAGR-RNEHFSRTTAAPSTREAILEVLRAELPDVLSRVRLVLADEPLPQSNGQTSALYPLDTGTSFPKACANGGGDCCSRSQPSAEVQSALAAAWPSLESVSSCLDLVLREERLRQQDYHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEA----PVQLHDWPLSIVRAPPDSPCQGLPQFQIPCALMTAVG 769
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.940e-16
Identity = 80/299 (26.76%), Postives = 115/299 (38.46%), Query Frame = 1 
Query:   28 VGVLSLLSAEVAHQPAFGADAAWGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTE----VEHAVGLLNPISIEYHQEQAGYIPNGCE-----------------------------TGCEINA-------------------------------YWQLYKMKAVYRMM------EEHEATT-------GLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYDC 690
            +G +S+ S E    P   A+       C  AV  SG VRSFV P +H S +++++E ++ + C VDVF++ S+ DE           D L       QD E    +E  +  L+P  + +HQEQAG IPN C                              TG  +                                 YWQLY+  A YR+       +E EA T          Y W++ +R D+AW   +P    F    V+     +P+S  F L PR F+   F AV   + C
Sbjct:   15 LGCISVASCESNQDPTTAAEI---PPPCAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASLGDE-----------DLLV-----EQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASKEPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHAC 294
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: A0A7S2FD05_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD05_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.840e-14
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 1 
Query:  109 CRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQDTEVEHAVGLLNP----ISIEYHQEQAGY-IPNGCETGCEIN-AYWQLYKMKA-VYRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQF 627
            C   V  SG +RS + P V   H    +E L  + C  ++  H+S   +    +    FE  +         T++E  +  LN     +   Y  + A Y +PN C +G     AY Q YK+ A ++  +   E   G  YTW++RSR D+ W+LP PP+    PTRV+  +N++PL D F
Sbjct:   99 CLIGVCLSGTMRSMITPSVQ-RHFMAAMEHLAGETCEFELLAHVSTGAKDAATHASNSFEANM---------TQIETTLHALNATGKLVHTTYFDDDAHYAVPNSCPSGDPPPMAYHQAYKVAACLHACVLPREKALGRRYTWLVRSRYDLGWVLPPPPVETLNPTRVHVPYNYWPLFDGF 269
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.980e-10
Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = 1 
Query:  505 YTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRRFAQSIFGAVSLCYD--CQALEAHRESKVPAQVEGLLRVALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASG 897
            Y WVIR+R D+++++P+PPL+      V+  ++  P+SD F + PR +  + F A  LC+   C    A    K     E +L  ALR        P   +++P++IVR+     C+ L   ++ C ++ A G
Sbjct:   21 YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARDFPKGAGSTELVLLAALRAAEA----PVQLHDWPLSIVRAPPDSPCQGLPQFQIPCALMTAVG 149
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BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Match: A0A7S0CV21_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CV21_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 1.630e-5
Identity = 54/199 (27.14%), Postives = 90/199 (45.23%), Query Frame = 1 
Query:    7 LNRIRRAVGVLSLLSAEVAHQPAFGADAAWGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQL-EIDCHVDVFMHISVED---------EVPRRYRK---GDFEDALAF---TPHTPQDTEV--EHAVGLLNPISIEYHQEQAGYIPNGCETGCEINAYWQLYK-MKAVYRMMEEHEATTGLSYTWVIRSRLDIAWM 546
            L+++R     L++LS   + +P             + A+LYSGHVRSFV P V  SH +N I+ L E   ++ +F  I  +D          V R   K   G+    + F   +P TP   E+  E   G  N     Y  ++   + N       +  +W  ++ +K VY++  + E T+G+ + +++R R D  WM
Sbjct:   71 LDKVRNLGEDLAILSNTTSSKP----QPKLPRRKLQIALLYSGHVRSFVLPGVRNSHVENFIQPLIERGANITIFASIRYDDFFRGRAPFPSVNRSAAKSWFGELGARVVFETGSPETPNVPELYKERCEGWSN-----YKLQKEQSLQN-------LGRFWNTWRRVKEVYQLATKFEHTSGMRFDYIVRLRPDFLWM 253
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1096.662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LCA5_ECTSI0.000e+095.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FK46_ECTSI1.760e-3732.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B5B2_9STRA1.140e-2028.34Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6H5KVJ6_9PHAE6.380e-1828.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WLT0_9STRA2.120e-1727.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7G5E2_ECTSI2.940e-1626.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FD05_9STRA6.840e-1430.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WMN0_9STRA3.980e-1030.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0CV21_9EUKA1.630e-527.14Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1096contigE-siliculosus-1a_F_contig1096:16752..19903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1875
Model size1875
Exons4
Ec32 orthologEc-14_005480.1
Ec32 ortholog descriptionhypothetical protein
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CY2I@1,2S1H1@2759
Seed eggNOG ortholog2880.D7G5E2
Seed ortholog evalue4.2e-17
Seed ortholog score96.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1096.662.1prot_E-siliculosus-1a_F_contig1096.662.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1096 16752..19903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927598.9068818-CDS-E-siliculosus-1a_F_contig1096:16751..181231622927598.9068818-CDS-E-siliculosus-1a_F_contig1096:16751..18123Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 16752..18123 -
1696318604.5184376-CDS-E-siliculosus-1a_F_contig1096:16751..181231696318604.5184376-CDS-E-siliculosus-1a_F_contig1096:16751..18123Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 16752..18123 -
1622927598.9206564-CDS-E-siliculosus-1a_F_contig1096:18624..187491622927598.9206564-CDS-E-siliculosus-1a_F_contig1096:18624..18749Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 18625..18749 -
1696318604.5290227-CDS-E-siliculosus-1a_F_contig1096:18624..187491696318604.5290227-CDS-E-siliculosus-1a_F_contig1096:18624..18749Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 18625..18749 -
1622927598.9325643-CDS-E-siliculosus-1a_F_contig1096:19155..192921622927598.9325643-CDS-E-siliculosus-1a_F_contig1096:19155..19292Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 19156..19292 -
1696318604.5375273-CDS-E-siliculosus-1a_F_contig1096:19155..192921696318604.5375273-CDS-E-siliculosus-1a_F_contig1096:19155..19292Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 19156..19292 -
1622927598.9435914-CDS-E-siliculosus-1a_F_contig1096:19662..199031622927598.9435914-CDS-E-siliculosus-1a_F_contig1096:19662..19903Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 19663..19903 -
1696318604.5490646-CDS-E-siliculosus-1a_F_contig1096:19662..199031696318604.5490646-CDS-E-siliculosus-1a_F_contig1096:19662..19903Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 19663..19903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1096.662.1

>prot_E-siliculosus-1a_F_contig1096.662.1 ID=prot_E-siliculosus-1a_F_contig1096.662.1|Name=mRNA_E-siliculosus-1a_F_contig1096.662.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=625bp
MPLNRIRRAVGVLSLLSAEVAHQPAFGADAAWGTESCRCAVLYSGHVRSF
VQPRVHLSHKKNLIEQLEIDCHVDVFMHISVEDEVPRRYRKGDFEDALAF
TPHTPQDTEVEHAVGLLNPISIEYHQEQAGYIPNGCETGCEINAYWQLYK
MKAVYRMMEEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGH
NFFPLSDQFLLSPRRFAQSIFGAVSLCYDCQALEAHRESKVPAQVEGLLR
VALRRGHGHGAVPFGYYEFPVAIVRSNEGGVCEVLHPHKLACEMLRASGL
MGPLTAATGGGQPSSCLDMMNRWHRQACVEMFPPHDYRTEGGSEATADDS
GEGKNARLVGGEPGGGRELRDGGRGGGEDEQRQPVPTVHHRRDRGEAAWA
GAAGGTAPAKTLSFKEATRRVEGVNGNLSDLLGAMRIHVSPTQERLDYYV
AHHYPFHHVNPLRRPDRGPLDQIAVIEGYRLSQADFNRLALSFSCFLSDA
AAAADGKEDGSPRGPGERRGPAFDRFADEEGKREAASSSSQVYDDGEGTG
GRGGGVEDIEENVLVLKTTADEEEGLQAAVDCSLIESLHDVWVSLLDNKF
EPSEEICRGPAGPCLHTATPKEAS*
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mRNA from alignment at E-siliculosus-1a_F_contig1096:16752..19903-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1096.662.1 ID=mRNA_E-siliculosus-1a_F_contig1096.662.1|Name=mRNA_E-siliculosus-1a_F_contig1096.662.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3152bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1096:16752..19903- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGCTCAATCGGATACGGCGAGCGGTCGGTGTCCTTAGTCTCCTCTC
TGCTGAGGTCGCTCATCAACCAGCATTTGGTGCCGACGCAGCGTGGGGAA
CGGAGTCATGCAGATGTGCAGTGTTGTACTCGGGGCACGTACGAAGCTTC
GTACAGCCGCGGGTTCACCTTTCTCACAAGAAGAATCTGATCGAGCAACT
GGAGATCGACTGCCATGTGGATGTCTTCATGCACATATCAGGTATACTAC
AGTACACAGACAATCACCCACGTGAAGCCATGTTGGACAGTTCAGTACAC
AGAACAATCACCCACGTGAAGCCATGTTGGACAACATGATGAGAAATTCG
TGGTACCGTGGCAGACACATATGCACATAGAATGGATGTTGTTTTGCAAC
TGTCTTATTTTCTAGACCCTGTCGTAAGCGACAAATTTAACCCTCGGGCC
GGGTGGTATAGTGTTTATTTACCCGCTTTTGCATCCATCCTTAGCGAGGA
ACCCTTCTGGTGTTTTCCGTCCTCGAAACATGATCTTGTGAGAGGCACAG
ATCTCTGACATCTTGTCCCTTGCCGCTGCCCGACCGGGCGAACATACTCC
GTGAGCTACAGTCGAAGACGAGGTTCCGCGCCGGTATCGCAAAGGCGACT
TCGAAGATGCCCTGGCCTTCACCCCTCATACTCCCCAAGATACCGAAGTC
GAGCATGCGGTGGGGCTACTCAACCCAATCTCGATCGAATACCACCAGGT
GCGATACTGTAATGTACGAAGCAAGCCAGCCAAGTGTGATTCGGAACTAA
GATTTGGCTCTACAGCAGTTGAAACTAACTTTGTTTTTCTCGTCAACTAT
CATAATCTAGCCAGGAAATACGATGTTCGGGAGAGAGAGTGGATGGGTGG
GAGACGATGCCATCACGAGCCACAAGCCATCATCTACGAGGGTGGGAAGT
GCAATCGCCCGATGAGACTGTTAATAATCAACGTATTTGTTCATGTAAGA
GCAATTATACGTATGAGCTGCTCTAGCCTGGCGGGTACACACGGATTGAT
GCCAGCATGTTTGTCATTAAAACAGGCGCTGATGATGCTCGGTGTTTTAT
GGTCTTTGCCGCATCAAATTCCCGACGATGCATCACATGCTTCGGACTAC
ATAGGAGCAAGCGGGCTATATCCCCAACGGGTGCGAGACCGGCTGCGAGA
TAAACGCCTACTGGCAACTATACAAAATGAAGGCTGTGTACCGCATGATG
GAGGAGCACGAGGCCACTACTGGACTGTCGTGAGTGACATATGGCATGTT
ATACATGAGACAGACGACGTGCAGGACCATCTTAAGTCGATCTGTGTCGT
ACTACCTCCGGCCAATCATGTTTCGCACTCCACTATTTTGCGCACGATGG
TCAGATATGCGCCACATGGAACATGTGGCCTCTGATGCATCACTCCTCAC
TCCCCGGTGGAATTTCTGTATGGCTCCTGCATTAGATAGCTGCAGCTGAC
CGGAGAAGTGTGCAAAAGCGCTCTTTTGCTGCGTAGACGGCACGCTGTGG
GCTGCGGTTGAAACCTGCGAGAAATCCCCTGTTTACCACCTCCATCAACA
GTCATCGTCAGCACTCAAGATAGATGTGTTCAGCGTATAGGAAAAATTAC
CGTGGTGTTGCATCATTTTCTGGCTTTGGAATACATATAGTACCGGCACT
CATCAACACACCATCGATCGGCCCAGCCGATAAACCTACAGCATCAAACC
CGTCGTTTCGGCCCGATGCTCTCGAACAAGGTACACGTGGGTAATTCGCT
CCAGGCTGGACATCGCGTGGATGCTCCCGGTGCCGCCGTTGAGTCGATTC
CCGCCGACCCGCGTGTACGCGGGCCACAACTTCTTCCCCCTCTCTGATCA
GTTCCTGCTCTCGCCTCGGAGGTTCGCCCAGAGCATATTCGGGGCGGTCA
GCCTGTGCTACGATTGCCAGGCCCTCGAGGCCCACCGTGAGTCCAAGGTG
CCGGCGCAGGTGGAGGGTCTCCTGCGCGTGGCGCTGCGGCGAGGCCACGG
CCACGGCGCCGTCCCGTTCGGGTACTACGAGTTCCCCGTGGCGATCGTGC
GGAGCAACGAGGGCGGCGTCTGCGAGGTGTTGCACCCGCACAAGCTTGCG
TGCGAGATGCTGCGGGCGTCCGGCTTGATGGGACCCTTGACAGCGGCGAC
AGGCGGCGGGCAGCCATCATCGTGCTTGGACATGATGAACCGGTGGCACC
GACAGGCCTGCGTGGAAATGTTCCCACCCCACGACTATCGTACGGAAGGC
GGGTCGGAGGCAACCGCGGACGACAGTGGAGAGGGAAAAAATGCCAGATT
GGTCGGCGGCGAGCCCGGAGGCGGGAGGGAGCTCCGTGATGGCGGGAGGG
GTGGAGGGGAGGATGAGCAACGCCAGCCCGTTCCCACGGTTCACCATCGC
AGGGATAGAGGTGAAGCAGCATGGGCGGGTGCTGCCGGTGGCACTGCTCC
TGCAAAAACCCTGTCCTTCAAAGAGGCCACCCGGCGGGTCGAAGGGGTCA
ACGGCAACCTCAGCGATCTACTCGGAGCGATGAGGATACACGTCTCCCCT
ACGCAAGAACGACTGGATTACTACGTGGCCCACCACTACCCTTTCCACCA
CGTCAACCCCCTCCGCCGGCCCGACCGCGGGCCTCTGGATCAAATCGCAG
TCATCGAGGGCTACCGACTGTCTCAGGCAGACTTCAACCGGCTCGCCCTT
TCTTTCTCGTGCTTCCTGTCGGATGCCGCCGCCGCCGCCGACGGGAAGGA
AGACGGTTCGCCACGAGGACCTGGCGAGAGACGAGGCCCTGCTTTCGATC
GTTTCGCCGACGAAGAGGGAAAAAGGGAGGCCGCATCGTCATCGTCGCAG
GTTTACGATGATGGCGAGGGGACGGGCGGGAGGGGTGGTGGTGTCGAGGA
CATCGAAGAAAACGTTCTGGTGCTGAAAACAACGGCTGACGAAGAGGAAG
GCCTGCAAGCGGCCGTGGACTGCTCTTTGATAGAATCGCTCCATGACGTC
TGGGTGTCGTTGCTGGACAACAAATTCGAGCCATCAGAGGAGATTTGTCG
CGGACCCGCCGGGCCTTGCTTACACACGGCAACGCCGAAAGAAGCCAGCT
AG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1096:16752..19903-

>mRNA_E-siliculosus-1a_F_contig1096.662.1 ID=mRNA_E-siliculosus-1a_F_contig1096.662.1|Name=mRNA_E-siliculosus-1a_F_contig1096.662.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3750bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1096:16752..19903- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGCTCAATCGGATACGGCGAGCGGTCGGTGTCCTTAGTCTCCTCTC
TGCTGAGGTCGCTCATCAACCAGCATTTGGTGCCGACGCAGCGTGGGGAA
CGGAGTCATGCAGATGTGCAGTGTTGTACTCGGGGCACGTACGAAGCTTC
GTACAGCCGCGGGTTCACCTTTCTCACAAGAAGAATCTGATCGAGCAACT
GGAGATCGACTGCCATGTGGATGTCTTCATGCACATATCAGATGCCGCTC
AATCGGATACGGCGAGCGGTCGGTGTCCTTAGTCTCCTCTCTGCTGAGGT
CGCTCATCAACCAGCATTTGGTGCCGACGCAGCGTGGGGAACGGAGTCAT
GCAGATGTGCAGTGTTGTACTCGGGGCACGTACGAAGCTTCGTACAGCCG
CGGGTTCACCTTTCTCACAAGAAGAATCTGATCGAGCAACTGGAGATCGA
CTGCCATGTGGATGTCTTCATGCACATATCAGTCGAAGACGAGGTTCCGC
GCCGGTATCGCAAAGGCGACTTCGAAGATGCCCTGGCCTTCACCCCTCAT
ACTCCCCAAGATACCGAAGTCGAGCATGCGGTGGGGCTACTCAACCCAAT
CTCGATCGAATACCACCAGTCGAAGACGAGGTTCCGCGCCGGTATCGCAA
AGGCGACTTCGAAGATGCCCTGGCCTTCACCCCTCATACTCCCCAAGATA
CCGAAGTCGAGCATGCGGTGGGGCTACTCAACCCAATCTCGATCGAATAC
CACCAGGAGCAAGCGGGCTATATCCCCAACGGGTGCGAGACCGGCTGCGA
GATAAACGCCTACTGGCAACTATACAAAATGAAGGCTGTGTACCGCATGA
TGGAGGAGCACGAGGCCACTACTGGACTGTCGAGCAAGCGGGCTATATCC
CCAACGGGTGCGAGACCGGCTGCGAGATAAACGCCTACTGGCAACTATAC
AAAATGAAGGCTGTGTACCGCATGATGGAGGAGCACGAGGCCACTACTGG
ACTGTCGTACACGTGGGTAATTCGCTCCAGGCTGGACATCGCGTGGATGC
TCCCGGTGCCGCCGTTGAGTCGATTCCCGCCGACCCGCGTGTACGCGGGC
CACAACTTCTTCCCCCTCTCTGATCAGTTCCTGCTCTCGCCTCGGAGGTT
CGCCCAGAGCATATTCGGGGCGGTCAGCCTGTGCTACGATTGCCAGGCCC
TCGAGGCCCACCGTGAGTCCAAGGTGCCGGCGCAGGTGGAGGGTCTCCTG
CGCGTGGCGCTGCGGCGAGGCCACGGCCACGGCGCCGTCCCGTTCGGGTA
CTACGAGTTCCCCGTGGCGATCGTGCGGAGCAACGAGGGCGGCGTCTGCG
AGGTGTTGCACCCGCACAAGCTTGCGTGCGAGATGCTGCGGGCGTCCGGC
TTGATGGGACCCTTGACAGCGGCGACAGGCGGCGGGCAGCCATCATCGTG
CTTGGACATGATGAACCGGTGGCACCGACAGGCCTGCGTGGAAATGTTCC
CACCCCACGACTATCGTACGGAAGGCGGGTCGGAGGCAACCGCGGACGAC
AGTGGAGAGGGAAAAAATGCCAGATTGGTCGGCGGCGAGCCCGGAGGCGG
GAGGGAGCTCCGTGATGGCGGGAGGGGTGGAGGGGAGGATGAGCAACGCC
AGCCCGTTCCCACGGTTCACCATCGCAGGGATAGAGGTGAAGCAGCATGG
GCGGGTGCTGCCGGTGGCACTGCTCCTGCAAAAACCCTGTCCTTCAAAGA
GGCCACCCGGCGGGTCGAAGGGGTCAACGGCAACCTCAGCGATCTACTCG
GAGCGATGAGGATACACGTCTCCCCTACGCAAGAACGACTGGATTACTAC
GTGGCCCACCACTACCCTTTCCACCACGTCAACCCCCTCCGCCGGCCCGA
CCGCGGGCCTCTGGATCAAATCGCAGTCATCGAGGGCTACCGACTGTCTC
AGGCAGACTTCAACCGGCTCGCCCTTTCTTTCTCGTGCTTCCTGTCGGAT
GCCGCCGCCGCCGCCGACGGGAAGGAAGACGGTTCGCCACGAGGACCTGG
CGAGAGACGAGGCCCTGCTTTCGATCGTTTCGCCGACGAAGAGGGAAAAA
GGGAGGCCGCATCGTCATCGTCGCAGGTTTACGATGATGGCGAGGGGACG
GGCGGGAGGGGTGGTGGTGTCGAGGACATCGAAGAAAACGTTCTGGTGCT
GAAAACAACGGCTGACGAAGAGGAAGGCCTGCAAGCGGCCGTGGACTGCT
CTTTGATAGAATCGCTCCATGACGTCTGGGTGTCGTTGCTGGACAACAAA
TTCGAGCCATCAGAGGAGATTTGTCGCGGACCCGCCGGGCCTTGCTTACA
CACGGCAACGCCGAAAGAAGCCAGCTAGGTACACGTGGGTAATTCGCTCC
AGGCTGGACATCGCGTGGATGCTCCCGGTGCCGCCGTTGAGTCGATTCCC
GCCGACCCGCGTGTACGCGGGCCACAACTTCTTCCCCCTCTCTGATCAGT
TCCTGCTCTCGCCTCGGAGGTTCGCCCAGAGCATATTCGGGGCGGTCAGC
CTGTGCTACGATTGCCAGGCCCTCGAGGCCCACCGTGAGTCCAAGGTGCC
GGCGCAGGTGGAGGGTCTCCTGCGCGTGGCGCTGCGGCGAGGCCACGGCC
ACGGCGCCGTCCCGTTCGGGTACTACGAGTTCCCCGTGGCGATCGTGCGG
AGCAACGAGGGCGGCGTCTGCGAGGTGTTGCACCCGCACAAGCTTGCGTG
CGAGATGCTGCGGGCGTCCGGCTTGATGGGACCCTTGACAGCGGCGACAG
GCGGCGGGCAGCCATCATCGTGCTTGGACATGATGAACCGGTGGCACCGA
CAGGCCTGCGTGGAAATGTTCCCACCCCACGACTATCGTACGGAAGGCGG
GTCGGAGGCAACCGCGGACGACAGTGGAGAGGGAAAAAATGCCAGATTGG
TCGGCGGCGAGCCCGGAGGCGGGAGGGAGCTCCGTGATGGCGGGAGGGGT
GGAGGGGAGGATGAGCAACGCCAGCCCGTTCCCACGGTTCACCATCGCAG
GGATAGAGGTGAAGCAGCATGGGCGGGTGCTGCCGGTGGCACTGCTCCTG
CAAAAACCCTGTCCTTCAAAGAGGCCACCCGGCGGGTCGAAGGGGTCAAC
GGCAACCTCAGCGATCTACTCGGAGCGATGAGGATACACGTCTCCCCTAC
GCAAGAACGACTGGATTACTACGTGGCCCACCACTACCCTTTCCACCACG
TCAACCCCCTCCGCCGGCCCGACCGCGGGCCTCTGGATCAAATCGCAGTC
ATCGAGGGCTACCGACTGTCTCAGGCAGACTTCAACCGGCTCGCCCTTTC
TTTCTCGTGCTTCCTGTCGGATGCCGCCGCCGCCGCCGACGGGAAGGAAG
ACGGTTCGCCACGAGGACCTGGCGAGAGACGAGGCCCTGCTTTCGATCGT
TTCGCCGACGAAGAGGGAAAAAGGGAGGCCGCATCGTCATCGTCGCAGGT
TTACGATGATGGCGAGGGGACGGGCGGGAGGGGTGGTGGTGTCGAGGACA
TCGAAGAAAACGTTCTGGTGCTGAAAACAACGGCTGACGAAGAGGAAGGC
CTGCAAGCGGCCGTGGACTGCTCTTTGATAGAATCGCTCCATGACGTCTG
GGTGTCGTTGCTGGACAACAAATTCGAGCCATCAGAGGAGATTTGTCGCG
GACCCGCCGGGCCTTGCTTACACACGGCAACGCCGAAAGAAGCCAGCTAG
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