mRNA_E-siliculosus-1a_F_contig1096.661.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1096.661.1
Unique NamemRNA_E-siliculosus-1a_F_contig1096.661.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI)

HSP 1 Score: 478 bits (1230), Expect = 2.310e-168
Identity = 229/236 (97.03%), Postives = 232/236 (98.31%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWGDQASPAIVPTFRAVAAANSGALFGRKFSSGTEEGRDGVRWVESYLAESSR 708
            GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL+ DEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDA KEMLRRPMPN+FTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTY SGMMVSDEEFFQTVACNPFFPHDTLRVH+DNLRFVNWWGDQASPAIVPTFRAVAAANSGALFGRKFSS TEEGRDGVRWVESYLAESSR
Sbjct:   72 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLK-DEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAHKEMLRRPMPNIFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYSSGMMVSDEEFFQTVACNPFFPHDTLRVHNDNLRFVNWWGDQASPAIVPTFRAVAAANSGALFGRKFSSSTEEGRDGVRWVESYLAESSR 306          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 1.660e-166
Identity = 229/236 (97.03%), Postives = 232/236 (98.31%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWGDQASPAIVPTFRAVAAANSGALFGRKFSSGTEEGRDGVRWVESYLAESSR 708
            GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMR+TGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKS DNQARMLLTYFSGM+VSDEEFFQTVACNPFFPHDTLRVH+DNLRFVNWWGDQASPAIVP FRAVAAANSGALFGRKFSS TEEGRDGVRWVESYLA SSR
Sbjct:  165 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRDTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSRDNQARMLLTYFSGMIVSDEEFFQTVACNPFFPHDTLRVHNDNLRFVNWWGDQASPAIVPPFRAVAAANSGALFGRKFSSSTEEGRDGVRWVESYLAASSR 400          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.440e-45
Identity = 92/215 (42.79%), Postives = 130/215 (60.47%), Query Frame = 1
Query:    4 FTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEM--LRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWG-DQASPAIVPTFRAVAAANSGALFGRKF 639
            F+M L A++GL+ A+ W+++WD++INLS +D+PLL ADE+  +LG           G    P WE  +  DRR  + +DE + R+  R +     I  A K M  + RP P++F V+KGEFWV+LHRS+AEY+H SPDN AR +  Y +   +SDE FFQTVAC+P  P  +  + +D+LRF+ W    +  PA +       A  SGALF RKF
Sbjct:  118 FSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLTADEMRLVLGALSRDRPVSFMGCT-RPDWEQVR-PDRRHTYMDDEGLYRSLPRPRGRLSVIQHAPKPMRGVARPPPDLFDVYKGEFWVVLHRSLAEYIHHSPDNVARSVYLYLAATYISDELFFQTVACHPKLPA-SFHIINDSLRFIRWPPKSRGHPATIDDVLLEEALASGALFARKF 329          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.330e-43
Identity = 92/230 (40.00%), Postives = 126/230 (54.78%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMR-NTGREKRWPWAILDAQKEMLR--RPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNW--------WGDQASPAIVPTFRAVAAANSGALFGRKFSSGTEE 657
            G+++TL A++GL+  + W+  WDYFINLSA+D PLL + E++  +G       +F+TG             +R E++ +D+ + R N  R    P+         +R  RP+PN+FT+ KGEFWV LHR   EYVH+SPDN AR L  YF+   +SDE FFQT  C+P  P     +H+DNLR VNW        W     P  V +        SGALF RKF  GT +
Sbjct:  198 GYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTGSAMMEQ-------NRAELYVDDQGLYRVNETRRAAQPFLQRRQSGPPVRVERPLPNLFTLFKGEFWVALHRDFCEYVHESPDNVARSLQAYFAKFRISDESFFQTTLCHPAAP-SAFPIHNDNLRLVNWPYFDPETEWVLHPDP--VQSKHVTKLMKSGALFARKFELGTSD 417          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.890e-37
Identity = 86/233 (36.91%), Postives = 116/233 (49.79%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFK---YEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNW-------WGDQAS----------PAIVPTFRAVAAANSGALFGRKF 639
            GF++TL  +YG+  AL W+  WDYFINLS SD P++  DE+   LGEH     SF+ G     +E  W+GY          ED+ + R            L      ++R  P  F ++KGEFW   HRS  EY   SPDN AR L  YF+G  +SDE +FQT+AC+P        +H DN RF +W        G +            P  + +   + A++SGALF RKF
Sbjct:  166 GFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGEPMTGFEKRWQGY---------TEDQGLHRRADHHTSVAMQTLGR----IQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHP--EGKVFPIHGDNFRFTSWNEHHRDSHGRKVDANGHILIHPEPLAIASIDKIKASSSGALFARKF 383          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.040e-36
Identity = 87/231 (37.66%), Postives = 114/231 (49.35%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITG---FKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWGDQASP-----------AIVPTFRAVAAAN----SGALFGRKF 639
            GF++TL  +YG+  AL W+  WDYFINLS SD P++  DE+   LGEH     SF+ G     +E  W+GY          ED+ + R            L      ++R  P  F ++KGEFW   HRS  EY   SPDN AR L  YF+G  +SDE +FQT+AC+P        +H DN RF +W                   I P   A+A+ +    SGALF RKF
Sbjct:  226 GFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQGY---------TEDQGLQRRADHHTSVAMQTLGR----IQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHP--EGKVFPIHGDNFRFTSWNEHHRDSHGRKIDANGHILIHPEPLAIASVDKIMSSGALFARKF 441          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 4.620e-35
Identity = 93/264 (35.23%), Postives = 135/264 (51.14%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHD-----------------DNLRFVNWWGDQASPAIVPTFRAV--------------AAANSGALFGRKFSSGTEEGRDGVRWVESYLAE 699
            G+T+TL A++G+   + WN +WD+FINLSASD PLL   E+  +LG++     +F++G   EP  E     +R E+  +D+ + R     K      L   K  L  P  ++FTV+KGEFWV+LHRS  +Y+  SPDN AR L  YFS   +SDE +FQTV C+P  P   ++  +                 DNLRFV+W      P ++     +               A +SGALF RKF   T+  ++    +E  L+E
Sbjct:  244 GYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSG---EPLNER----NRAEVLIDDQGLYREKQSSK--AGRPLKVGKARLP-PSKSMFTVYKGEFWVILHRSFCKYLEASPDNVARSLQAYFSKFRISDESYFQTVLCHPLAPSFLVQPAEKVPIVCLATKRLSCSFTDNLRFVSW------PDVIEGHYVLHPDPITGGASGNVNVAMDSGALFARKFD--TKVSQEAYTVLEKSLSE 489          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A388KN84_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KN84_CHABU)

HSP 1 Score: 94.7 bits (234), Expect = 3.300e-18
Identity = 68/214 (31.78%), Postives = 98/214 (45.79%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWGDQAS-PAIVPTFRAVAAANSGALFGRKF 639
            G TM    ++G++  L   +KWD+FINLSASD PL+  D+   +L     G  +F+      P    YK   R      D A+ R+T  +      +   Q+    R  PN F + +G  WVML  +  EY+    DN  R+ L YF+ ++ S E +F TV CN    H    V+ D L F+ W       P  + +    A  N+   F RKF
Sbjct:  156 GPTMISTTLHGMSIFLRKKSKWDWFINLSASDYPLITQDDFLHVLSSVPRG-LNFLDHTSEIPD---YKMRQRVRSMVVDPAIYRSTKSD------LFFVQET---RATPNAFRLFQGSAWVMLSYNFCEYLIYGWDNLPRLALMYFANVLSSPESYFHTVVCNS-KEHFNTTVNTD-LHFIAWQNPPTQHPLFLNSTFYAAMVNASVPFARKF 354          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A0K9NHY8_ZOSMR (Glycosyltransferase, family GT14 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NHY8_ZOSMR)

HSP 1 Score: 92.8 bits (229), Expect = 1.110e-17
Identity = 70/218 (32.11%), Postives = 101/218 (46.33%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWGD-QASPAIVPTFRAVAAANSGALFGRKFSSGT 651
            G TM  N ++     L+ +  WD+FINLSA+D PL+  D+I  +  +    N +F+       S  G+K  DR      D  +  N            D      +R +P+ F +  G  W+ L R   EY     DN  R LL Y++  + S E +FQTV CN   P     V +++L +++W    Q  PA + T +      SGA F RKFSSGT
Sbjct:  138 GPTMVANTLHACAILLNISKDWDWFINLSAADYPLVSQDDILKMFSKVDR-NMNFVE----HSSNLGWKEWDRGNPLMIDPGLYSNRK---------ADVFFTTEKRELPSQFKLFTGSAWMGLTREFVEYCILGIDNLPRTLLMYYTNFVSSPEGYFQTVICNS--PEFNSTVVNNDLHYISWPDPPQQHPAPILTQQFDVLLASGAPFARKFSSGT 339          
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Match: A0A388K5S3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K5S3_CHABU)

HSP 1 Score: 92.8 bits (229), Expect = 2.970e-17
Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 1
Query:    1 GFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVSDEEFFQTVACN-PFFPHDTLRVHDDNLRFVNWWGDQASPAIV 582
            G TM  + ++G+   L     WD+FINLS SD PL+  DE+  +L      N SFI           +     R   A  E V  + G    +     D  +   +R MP  F + KG  WV L RS AEYV    DN  R+L+ YF+  + S E +FQT  CN P F    + V   +L +V W G    P ++
Sbjct:  386 GATMITSTLHGIAVLLRRKRSWDWFINLSPSDYPLVTQDELLYVLSSVPR-NLSFIA----------HSNKTDRIQRARIEPVFVDPGF---YGTEKSDLIQTNRKRSMPTAFRIFKGSAWVCLSRSFAEYVIWGYDNLPRLLVAYFANFVSSPESYFQTAICNSPDFAGSVVNV---DLHYVQWMGGGQHPMVL 563          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1096.661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCA7_ECTSI2.310e-16897.03Protein xylosyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KJT8_9PHAE1.660e-16697.03Protein xylosyltransferase (Fragment) n=1 Tax=Ecto... [more]
A0A835YZY2_9STRA2.440e-4542.79Core-2/I-branching enzyme-domain-containing protei... [more]
A0A6H5L1U8_9PHAE1.330e-4340.00GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5KBR7_9PHAE1.890e-3736.91GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LDZ1_ECTSI6.040e-3637.66Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus... [more]
A0A6H5L6Q9_9PHAE4.620e-3535.23Protein xylosyltransferase n=2 Tax=Ectocarpus TaxI... [more]
A0A388KN84_CHABU3.300e-1831.78Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0K9NHY8_ZOSMR1.110e-1732.11Glycosyltransferase, family GT14 n=1 Tax=Zostera m... [more]
A0A388K5S3_CHABU2.970e-1733.33Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1096contigE-siliculosus-1a_F_contig1096:807..4665 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size894
Model size903
Exons6
Ec32 orthologEc-14_005460.1
Ec32 ortholog descriptionXylosyltransferase, family GT14
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
CAZyGT14
COG Functional cat.O
EC2.4.2.26
EggNOG OGsKOG0799@1,KOG0799@2759
EggNOG free text desc.acetylglucosaminyltransferase activity
GOsGO:0000003,GO:0000139,GO:0002009,GO:0002119,GO:0002164,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005975,GO:0005996,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006082,GO:0006139,GO:0006725,GO:0006790,GO:0006793,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007610,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009791,GO:0009888,GO:0009987,GO:0010033,GO:0010721,GO:0010975,GO:0010977,GO:0012505,GO:0015012,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016763,GO:0018991,GO:0019098,GO:0019321,GO:0019538,GO:0022008,GO:0022414,GO:0030154,GO:0030158,GO:0030166,GO:0030201,GO:0030202,GO:0030203,GO:0030204,GO:0030206,GO:0030210,GO:0031090,GO:0031224,GO:0031344,GO:0031345,GO:0031984,GO:0032101,GO:0032102,GO:0032501,GO:0032502,GO:0032504,GO:0033319,GO:0033554,GO:0034097,GO:0034605,GO:0034641,GO:0034645,GO:0035252,GO:0040025,GO:0042221,GO:0042285,GO:0042732,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046483,GO:0048513,GO:0048519,GO:0048523,GO:0048569,GO:0048583,GO:0048585,GO:0048609,GO:0048679,GO:0048681,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050650,GO:0050654,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051129,GO:0051239,GO:0051241,GO:0051716,GO:0051960,GO:0051961,GO:0055086,GO:0060284,GO:0060429,GO:0065007,GO:0070555,GO:0070570,GO:0070571,GO:0071704,GO:0080134,GO:0080135,GO:0098588,GO:0098791,GO:0120035,GO:0140096,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903034,GO:1903035,GO:1903510,GO:2000026
KEGG ModuleM00057
KEGG Pathwayko00532,ko00534,ko01100,map00532,map00534,map01100
KEGG ReactionR05925
KEGG koko:K00771
Preferred nameXYLT2
Seed eggNOG ortholog2880.D8LCA7
Seed ortholog evalue3.5e-131
Seed ortholog score474.6
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927598.6811898-UTR-E-siliculosus-1a_F_contig1096:806..8151622927598.6811898-UTR-E-siliculosus-1a_F_contig1096:806..815Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1096 807..815 +
1696318604.4503891-UTR-E-siliculosus-1a_F_contig1096:806..8151696318604.4503891-UTR-E-siliculosus-1a_F_contig1096:806..815Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1096 807..815 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927598.6922922-CDS-E-siliculosus-1a_F_contig1096:815..9201622927598.6922922-CDS-E-siliculosus-1a_F_contig1096:815..920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 816..920 +
1696318604.460629-CDS-E-siliculosus-1a_F_contig1096:815..9201696318604.460629-CDS-E-siliculosus-1a_F_contig1096:815..920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 816..920 +
1622927598.7042131-CDS-E-siliculosus-1a_F_contig1096:1539..16431622927598.7042131-CDS-E-siliculosus-1a_F_contig1096:1539..1643Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 1540..1643 +
1696318604.468004-CDS-E-siliculosus-1a_F_contig1096:1539..16431696318604.468004-CDS-E-siliculosus-1a_F_contig1096:1539..1643Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 1540..1643 +
1622927598.7174606-CDS-E-siliculosus-1a_F_contig1096:2128..22611622927598.7174606-CDS-E-siliculosus-1a_F_contig1096:2128..2261Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 2129..2261 +
1696318604.4783537-CDS-E-siliculosus-1a_F_contig1096:2128..22611696318604.4783537-CDS-E-siliculosus-1a_F_contig1096:2128..2261Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 2129..2261 +
1622927598.727293-CDS-E-siliculosus-1a_F_contig1096:2984..30861622927598.727293-CDS-E-siliculosus-1a_F_contig1096:2984..3086Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 2985..3086 +
1696318604.4858017-CDS-E-siliculosus-1a_F_contig1096:2984..30861696318604.4858017-CDS-E-siliculosus-1a_F_contig1096:2984..3086Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 2985..3086 +
1622927598.8557792-CDS-E-siliculosus-1a_F_contig1096:3444..36991622927598.8557792-CDS-E-siliculosus-1a_F_contig1096:3444..3699Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 3445..3699 +
1696318604.4972517-CDS-E-siliculosus-1a_F_contig1096:3444..36991696318604.4972517-CDS-E-siliculosus-1a_F_contig1096:3444..3699Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 3445..3699 +
1622927598.8673735-CDS-E-siliculosus-1a_F_contig1096:4470..46651622927598.8673735-CDS-E-siliculosus-1a_F_contig1096:4470..4665Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 4471..4665 +
1696318604.5089257-CDS-E-siliculosus-1a_F_contig1096:4470..46651696318604.5089257-CDS-E-siliculosus-1a_F_contig1096:4470..4665Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1096 4471..4665 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1096.661.1prot_E-siliculosus-1a_F_contig1096.661.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1096 816..4665 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1096.661.1

>prot_E-siliculosus-1a_F_contig1096.661.1 ID=prot_E-siliculosus-1a_F_contig1096.661.1|Name=mRNA_E-siliculosus-1a_F_contig1096.661.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=298bp
MTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNT
SFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAQKE
MLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYFSGMMVS
DEEFFQTVACNPFFPHDTLRVHDDNLRFVNWWGDQASPAIVPTFRAVAAA
NSGALFGRKFSSGTEEGRDGVRWVESYLAESSRRPAAAARHSGGGRPPRV
SAAPGTGSLEGKGILGENDDAGRRQQQRRRWRRRRRLVGREGKGGDE*
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mRNA from alignment at E-siliculosus-1a_F_contig1096:807..4665+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1096.661.1 ID=mRNA_E-siliculosus-1a_F_contig1096.661.1|Name=mRNA_E-siliculosus-1a_F_contig1096.661.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3859bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1096:807..4665+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCTTCACAATGACGTTGAACGCTGTGTACGGGCTGACGCAAGCTCTGCA CTGGAACACCAAGTGGGACTACTTCATCAACTTGAGCGCGTCCGACCTCC CTCTGTTGAGAGCGGTGAGAGAACCCCCCCCCCCCCCCGATCACACGACA ACCGACGAGCACGGAATGCTAGCCCACCTTCACTACCCCTGGATAGCTAG CGATCGTGGACAAGTTGGCGGTGAAGAATTTCACGGTGTGATCTTTCCTA TCAGTGTTGCTGTATATAGTCGTGCTCGCCTATCGTGCTGTAGCCGTGCA CTCTCCCCAGGTGCGGTAAGAGGCTCGACAACACGTTGTAAGGGGTCGTC TTGGGTACTGTTTTACATAGGTCATTGTTTTGCGAGAGGGTGGCTCGTTT TTTTCCCCCAAAATTTGTTCACCACTCGAGCGAACTGATTGAGGGAAACC CAGCGGGAGGTATGGCATGCCGTCGTGGCTTTTGTACGTGCTGTGGGCAT CCGACCCTGTCTGGGGTTATCCGACCAAATTACGGTTGTCGTGCTACCCC GACCCCCCTTTTGTGTGCCACCAGGCGCGCCATCTCCCCTTTTTTTTTTT TCCTCCTCTGCGAGGAGAAGCAGAACGTTATTTTTGTGGCGGCGTTTGGC CGGCATGCCTTTCGTCTGGTGCTGATATCTCGTTGCTACTAATTTTCTAA TCTGTTGCTATGTTGTTGGTGCCGGTGATTCAGGACGAGATTGCGGGGAT CCTTGGGGAGCACAAAGCCGGCAACACTTCCTTCATCACCGGTTTCAAGT ATGAACCATCTTGGGAGGGCTACAAATTTGTCGACAGGTGCAAAAACTCA TGCCACGCCGGGTTTGTGCTTGGAGGGAGTTTAGGGAGTTTTTTAGAGCA AGGGGTCGGGGGGGCGTGGATGCCGAAACTTGAAGACACCGAAGCCTTTT CGATTTACTTCATTTTTCTCACTGGAAAAGCTTATGTTTGGATGCCCAAG GCTTATGTTTGCATGCCCAAAGCTTATGTTTGCATGCCCCTCTAACTGCT GTAACCTTGAGCTGTAGTCGAGTCTGACACGCAGAAGCGACAAATCGGAT AGGAAGTTGTCAAGATCTGTTTTTCAGTGTTTTCTGTTTTTGGGTACCTT GGTTTTCGTAGTTTTTGACGTCCTCTCGGCTTTTTTCCCTTTTGGACTTC CTGTTGTGCGCTGCTGCATGTATGTGTGATTGATTCGTAACTCGTGTGTG TTACTGGGCTAAGGTTTTGCCCCTTGCATCTTTTGTGTGTGTGCATGTGC ATATGTTCTTTCGCGCCAACAGGCGAGAGATGTTTGCCGAAGACGAGGCC GTGATGCGAAACACGGGCCGCGAGAAGCGGTGGCCCTGGGCCATCCTAGA CGCCCAGAAGGAGATGCTCCGGCGGCCGATGCCCAACGTCTTCACCGTCC ACAAGGTACGCTTCAATGACGCCTCCAAATATGTTTAGACCCTCTGTCGG ACAAGTTTGAGTTGCCATATTTTCGTGGGTGAAATCGCGTGACACAGACG GAATGGTATTGAAGGGGTTCTGCGTAGTACCAGAATAGTCCAGGTGTTGT CATATGTACAGTACCAGGTTGCCCCGTGTAGGGCCGGCCTTGTCCCTTGG CACTATGCGACCTTATATTGACTAGACTGCTGCGTTGTTGCATGCCCAGC CACCTACTGGTACCTCTGTGGCGCGTAGTGCTGCACGATACCGAGGGGGA TCAACGGAATTGGAGACTTGCCGCGCAGGCCGCACGGTGTTGCGAAGCCG CCTTCCTCAGATAGACTACGCCCAACTCGAGTCCTCGCGCACCACACTTG CATTTCGCACCGAGTACCCAGCCGCCAAGGTAGTAGCCCACTAGTAGACT GCTGCTGCTGCCGAATGTGGTGCCGACCAATCCGAAGGCTGTGGTAGATA GACGGGTGCGGCTAGGATTTACGGACCAGGCGCAGCCCGGCGTTGGAGGG TGAGACAGATGACGCCCCACCCTCCATTTCGATAGAGAAAGCATGTATCC ACAATCATGTCAACAACTCCTCTTAGACTTGAGTAATATACGTTTAAGAC TGAGCAAATACGTTTCGTTATTATTATTATTTTTTGACATTTTTGTTGCC CGCCGTTCGCCCCGCTTCGCGACGGCAGGGGGAGTTCTGGGTAATGCTGC ACAGGTCCATGGCGGAGTACGTGCACAAGTCGCCGGACAACCAGGCGCGG ATGCTGCTCACCTACTTCTCGGGAATGATGGTGAGGGTGGAGATTGGTCG CAACGCTGCTGCCAAGAGCGCGGGAGTCATTGGGCTACTCCCGCCGCCGG TGGTGGGAGAACCCCGGGGGAGCTCGAATAACAGCAGTTTTGGGGGGGAG GGGGGCGGCCGGTAGTGGGTGGGCGTCGTGGCGATGTTTTCGCGATGTGG TGCAGGCGAGCGGACGGAGCGCCAATACGAAAGCGTTATTTAGCTGTAGT GTGATGATGGGTGGTTGCGGCAGTGGTTGCTGTCGTCATCATCTTGGTTC TCTACCGCGGGTGCCCGCCCGACAGACAGCAGACACGTTTGAGTACATAC CCCCACCACTCCCGCCCTTTTTTTTTATCTGTCCCAAGGTGTCCGACGAG GAGTTCTTCCAGACCGTGGCGTGCAACCCGTTCTTCCCCCACGACACCCT GCGAGTCCACGACGACAACCTGCGGTTCGTGAACTGGTGGGGCGACCAGG CCAGCCCGGCCATCGTCCCGACGTTTAGGGCGGTGGCGGCGGCGAACAGC GGGGCTCTGTTTGGCCGGAAGTTTTCGTCGGGCACGGAAGAGGGGAGGGA TGGGGTACGGTGGGTGGAGAGCTATCTCGCCGAATCTTCTCGGGTAAGGG TGCAATGAAGTAATGGTTTGCGGACTCAAATGTATGCTAGTCCTTCACGA TTTTGGCCTCGATTTTGTTGTAACTTGCGCGGGTAATGAGGCTGTGGTTT TTAGCGTCGACGGCCTACATAGAACGACTGCTTGACGCTGATAGACTCCA TCCAGTGTTCGCGAAACAGAACAGACAGGTGGAGACAATTCCTGGGGAAA GTTAGTGTGCATGACAACTGTGCGGCTTTTGTTGCTGCCGTTTCGTGGTG GAAAGAACTGGTTTGTCTTCTCGCAGGTGTTTTTTCCCCTGTATTTTCTC TATTTTTGACGAGATGGCCCGCACATTTTTCGCGCACCCTCCCCCCCCCC TCCCCGTCGCACCCTGACTCCCAGAGTAAAGCACGGGTGGACAGGGTCAA GCGGCGGCTGGAGTCGCGCATGAGCCCAGCGGGGGAGCCCGTAGGCTTTT GCGGGAAGGCGCGAGAGAACAAGCCGCCGGAGGCGTTCTTCGCGGTGGAA GGAGAAGAAGAGGTTGTCCCACCAGGGTTCGAGCCGCAGCCGCCGCGCCG AGGGGGGGGAGGGGGGGGGGAGGAGGGGGGGTTTGCATGGGAGGAGGGCA ACTGGACAGGCGGGGGAGAGGATGACGCCTCAGCAAGAGGAGGAAGACGT CTCGCCGATATGGCATCGATTGCTCCTTTGGAAGGAAGAATCGTTGGGGC GTCAGCAGCAGCAGGAGGGCGGCGGCCCGGGGCCGGGGAGGCTGCGTTGT TAGAAGGGGCGGAGAGGCCGGCGGCAGCAGCGAGACATAGCGGTGGTGGA AGACCCCCTCGCGTGAGCGCTGCGCCCGGAACGGGCTCGCTTGAAGGGAA GGGTATCCTCGGGGAGAACGACGACGCGGGGCGGCGGCAGCAGCAGCGGC GACGATGGCGGCGGCGGCGAAGACTCGTCGGCCGTGAAGGGAAAGGGGGT GATGAGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1096:807..4665+

>mRNA_E-siliculosus-1a_F_contig1096.661.1 ID=mRNA_E-siliculosus-1a_F_contig1096.661.1|Name=mRNA_E-siliculosus-1a_F_contig1096.661.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1096:807..4665+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACGTTGAACGCTGTGTACGGGCTGACGCAAGCTCTGCACTGGAACAC
CAAGTGGGACTACTTCATCAACTTGAGCGCGTCCGACCTCCCTCTGTTGA
GAGCGATGACGTTGAACGCTGTGTACGGGCTGACGCAAGCTCTGCACTGG
AACACCAAGTGGGACTACTTCATCAACTTGAGCGCGTCCGACCTCCCTCT
GTTGAGAGCGGACGAGATTGCGGGGATCCTTGGGGAGCACAAAGCCGGCA
ACACTTCCTTCATCACCGGTTTCAAGTATGAACCATCTTGGGAGGGCTAC
AAATTTGTCGACAGGACGAGATTGCGGGGATCCTTGGGGAGCACAAAGCC
GGCAACACTTCCTTCATCACCGGTTTCAAGTATGAACCATCTTGGGAGGG
CTACAAATTTGTCGACAGGCGAGAGATGTTTGCCGAAGACGAGGCCGTGA
TGCGAAACACGGGCCGCGAGAAGCGGTGGCCCTGGGCCATCCTAGACGCC
CAGAAGGAGATGCTCCGGCGGCCGATGCCCAACGTCTTCACCGTCCACAA
GGCGAGAGATGTTTGCCGAAGACGAGGCCGTGATGCGAAACACGGGCCGC
GAGAAGCGGTGGCCCTGGGCCATCCTAGACGCCCAGAAGGAGATGCTCCG
GCGGCCGATGCCCAACGTCTTCACCGTCCACAAGGGGGAGTTCTGGGTAA
TGCTGCACAGGTCCATGGCGGAGTACGTGCACAAGTCGCCGGACAACCAG
GCGCGGATGCTGCTCACCTACTTCTCGGGAATGATGGGGGAGTTCTGGGT
AATGCTGCACAGGTCCATGGCGGAGTACGTGCACAAGTCGCCGGACAACC
AGGCGCGGATGCTGCTCACCTACTTCTCGGGAATGATGGTGTCCGACGAG
GAGTTCTTCCAGACCGTGGCGTGCAACCCGTTCTTCCCCCACGACACCCT
GCGAGTCCACGACGACAACCTGCGGTTCGTGAACTGGTGGGGCGACCAGG
CCAGCCCGGCCATCGTCCCGACGTTTAGGGCGGTGGCGGCGGCGAACAGC
GGGGCTCTGTTTGGCCGGAAGTTTTCGTCGGGCACGGAAGAGGGGAGGGA
TGGGGTACGGTGGGTGGAGAGCTATCTCGCCGAATCTTCTCGGGTGTCCG
ACGAGGAGTTCTTCCAGACCGTGGCGTGCAACCCGTTCTTCCCCCACGAC
ACCCTGCGAGTCCACGACGACAACCTGCGGTTCGTGAACTGGTGGGGCGA
CCAGGCCAGCCCGGCCATCGTCCCGACGTTTAGGGCGGTGGCGGCGGCGA
ACAGCGGGGCTCTGTTTGGCCGGAAGTTTTCGTCGGGCACGGAAGAGGGG
AGGGATGGGGTACGGTGGGTGGAGAGCTATCTCGCCGAATCTTCTCGGAG
GCCGGCGGCAGCAGCGAGACATAGCGGTGGTGGAAGACCCCCTCGCGTGA
GCGCTGCGCCCGGAACGGGCTCGCTTGAAGGGAAGGGTATCCTCGGGGAG
AACGACGACGCGGGGCGGCGGCAGCAGCAGCGGCGACGATGGCGGCGGCG
GCGAAGACTCGTCGGCCGTGAAGGGAAAGGGGGTGATGAGTGAAGGCCGG
CGGCAGCAGCGAGACATAGCGGTGGTGGAAGACCCCCTCGCGTGAGCGCT
GCGCCCGGAACGGGCTCGCTTGAAGGGAAGGGTATCCTCGGGGAGAACGA
CGACGCGGGGCGGCGGCAGCAGCAGCGGCGACGATGGCGGCGGCGGCGAA
GACTCGTCGGCCGTGAAGGGAAAGGGGGTGATGAGTGA
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