mRNA_E-siliculosus-1a_F_contig10951.659.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A6H5KZU9_9PHAE (Protein O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE) HSP 1 Score: 254 bits (650), Expect = 1.920e-76 Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRV NAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG Sbjct: 768 KQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVPNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 891
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A5D6YC07_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC07_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.600e-60 Identity = 92/124 (74.19%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSAR VLD PTRA YGVPED FV CNFNQ+YK+DPA F+TWM++LKRV +A+LWLLRFPP EANIR EA RGV+ +LHFTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 234 RQSARDVLDAAKCPTRAHYGVPEDAFVFCNFNQVYKIDPATFATWMNILKRVPSAILWLLRFPPLAEANIRAEAAARGVKAHRLHFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGG 357
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A7S2BCC6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCC6_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.850e-60 Identity = 96/126 (76.19%), Postives = 109/126 (86.51%), Query Frame = 1 Query: 13 QQSARYVLDRT--LLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QS+RY+LD T TRA YGVPED+FV CNFNQLYK+DPAIF W SVLKRV N++LWLLRFPPAGEANIR EARKRGV+EEQ+ F+DVA KEEHI+RG LA++FLDTP CNAHTTGCDILWSG Sbjct: 350 RQSSRYILDETDSEQKTRADYGVPEDKFVYCNFNQLYKIDPAIFDVWCSVLKRVENSILWLLRFPPAGEANIRAEARKRGVKEEQIFFSDVAPKEEHIRRGKLAEVFLDTPQCNAHTTGCDILWSG 475
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD) HSP 1 Score: 201 bits (510), Expect = 4.650e-60 Identity = 90/124 (72.58%), Postives = 105/124 (84.68%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSAR VLD PTRA YGVPED+FV CNFNQ+YK+DP F+TWM++LKRV N++LWLLRFPP EANIR EA+ RG++ +LHFTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 245 KQSARDVLDVEKCPTRAHYGVPEDKFVFCNFNQVYKIDPQTFTTWMNILKRVPNSILWLLRFPPIAEANIRAEAKARGIKSHRLHFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGG 368
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A2P4Y2W6_9STRA (UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W6_9STRA) HSP 1 Score: 196 bits (497), Expect = 4.340e-59 Identity = 91/125 (72.80%), Postives = 106/125 (84.80%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREE-QLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSA+ VLD PTRA YGVPED+FV CNFNQ+YK+DP F+TWM++LKRV N+VLWLLRFPP EANIR EAR RGV+++ +L FTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 135 KQSAQEVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGG 259
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL) HSP 1 Score: 201 bits (510), Expect = 1.880e-57 Identity = 91/124 (73.39%), Postives = 106/124 (85.48%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSAR VLD P+RA YGVPED+FV CNFNQ+YK+DPA F TWM+VLKRV N++LWLLRFPP EAN+R EAR +GV++ +LHFTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 725 KQSARDVLDVEKCPSRAHYGVPEDKFVFCNFNQVYKIDPATFRTWMNVLKRVPNSILWLLRFPPLAEANLRAEARAQGVKDNRLHFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGG 848
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: D0NXA5_PHYIT (Protein O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NXA5_PHYIT) HSP 1 Score: 197 bits (500), Expect = 4.710e-56 Identity = 92/125 (73.60%), Postives = 106/125 (84.80%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREE-QLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSAR VLD PTRA YGVPED+FV CNFNQ+YK+DP F+TWM++LKRV N+VLWLLRFPP EANIR EAR RGV+++ +L FTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 722 KQSARDVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGG 846
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A0W8DU52_PHYNI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI) HSP 1 Score: 197 bits (500), Expect = 5.150e-56 Identity = 92/125 (73.60%), Postives = 106/125 (84.80%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREE-QLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSAR VLD PTRA YGVPED+FV CNFNQ+YK+DP F+TWM++LKRV N+VLWLLRFPP EANIR EAR RGV+++ +L FTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 716 KQSARDVLDTDKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGG 840
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A2D4BUC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC4_PYTIN) HSP 1 Score: 197 bits (500), Expect = 6.580e-56 Identity = 89/124 (71.77%), Postives = 105/124 (84.68%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QSAR VLD PTRA YGVPE++FV CNFNQ+YK+DPA F TWM++LKRV N++LWLLRFPP EAN+R EAR +GV++ +LHFTDVA K+ H+KRGYLADLFLDTP CNAHTTGCDILW G Sbjct: 733 KQSARDVLDVDKCPTRAHYGVPENQFVFCNFNQVYKIDPATFRTWMNILKRVPNSILWLLRFPPIAEANLRAEARAQGVKDSRLHFTDVAPKDXHLKRGYLADLFLDTPXCNAHTTGCDILWGG 856
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Match: A0A7S0XDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDQ2_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.280e-55 Identity = 83/124 (66.94%), Postives = 99/124 (79.84%), Query Frame = 1 Query: 13 QQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVSNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSG 384 +QS+R V+D+ +PTR YG+ ED FV CNFNQLYK+DP+IF WM +LKRV N++LWLLRFP AGE NI EA RGVR +Q+ FTDVA +EEH+KRG+L DLFLDTP CNAHTT CDILW G Sbjct: 99 RQSSRDVVDKINMPTREQYGISEDAFVFCNFNQLYKIDPSIFDIWMRILKRVPNSILWLLRFPAAGEENIIREALARGVRRDQIIFTDVAPREEHVKRGFLPDLFLDTPVCNAHTTACDILWGG 222 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10951.659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10951.659.1 >prot_E-siliculosus-1a_F_contig10951.659.1 ID=prot_E-siliculosus-1a_F_contig10951.659.1|Name=mRNA_E-siliculosus-1a_F_contig10951.659.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=129bp MLSRQQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMback to top mRNA from alignment at E-siliculosus-1a_F_contig10951:449..1443- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10951.659.1 ID=mRNA_E-siliculosus-1a_F_contig10951.659.1|Name=mRNA_E-siliculosus-1a_F_contig10951.659.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=995bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10951:449..1443- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10951:449..1443- >mRNA_E-siliculosus-1a_F_contig10951.659.1 ID=mRNA_E-siliculosus-1a_F_contig10951.659.1|Name=mRNA_E-siliculosus-1a_F_contig10951.659.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=774bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10951:449..1443- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |