mRNA_E-siliculosus-1a_F_contig1095.658.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: D7G581_ECTSI (Chlorophyll synthase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G581_ECTSI) HSP 1 Score: 836 bits (2159), Expect = 5.070e-306 Identity = 413/426 (96.95%), Postives = 415/426 (97.42%), Query Frame = 1 Query: 1 MVSPWVVASVGALSVGGAGAFHVPVLPSARATPAANRHVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 MVSPWVVASVGALSVGGAGAFHVP LPSARAT AANRHVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTD+ILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ VVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALA+GHHTF Sbjct: 1 MVSPWVVASVGALSVGGAGAFHVPALPSARATAAANRHVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDEILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ---------VVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAMGHHTF 417
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: A0A835YRI7_9STRA (Chlorophyll synthase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI7_9STRA) HSP 1 Score: 563 bits (1452), Expect = 1.710e-198 Identity = 287/394 (72.84%), Postives = 314/394 (79.70%), Query Frame = 1 Query: 97 PAANRHVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFG--GGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHH 1272 PA + ++ + ++ FYPF + APS R A V P +K E GA RQL+G+KGAS TDD+LKIRLQLTKPVTWIPL+WGV+CGAAASGNYH WNP G VS DL KAL CM+L+GPFLTGYTQTINDWYDRDIDAINEPYRPIPSG I+E QV QI FLL GGLA+AYGLD+WAGHD P + LS+ GSFISYIYSAPP+KLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ VV+LTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVE AKW+CV SID TQLGIAAWLY +GEPTYAA+LTALVLPQ++AQFKYFLPDPV NDVKYQATAQPFLVFGILTTALAVG H Sbjct: 33 PARSHGMTMVQHGKERAAPFYPFPDAVAPSAA-----RPRAAVAPLRASK------EDGDGAVRQLLGVKGASDTDDLLKIRLQLTKPVTWIPLLWGVICGAAASGNYHTWNPLAAEGTAVSGADALGDLAKALVCMVLAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGKITEGQVKAQIAFLLGGGLALAYGLDLWAGHDTPTILLLSIFGSFISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ---------VVVLTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDLTQLGIAAWLYSVGEPTYAAVLTALVLPQIYAQFKYFLPDPVENDVKYQATAQPFLVFGILTTALAVGRH 406
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: A0A7S1XSB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSB6_9STRA) HSP 1 Score: 523 bits (1346), Expect = 4.490e-182 Identity = 266/375 (70.93%), Postives = 302/375 (80.53%), Query Frame = 1 Query: 151 SFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGDVSFDLGS--QDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGH 1269 SF+PF++S P P ++ + E+ VT K+ GGA RQL+G+KGAS TD+I KIRLQLTKPVTW+PLIWGV+CGAAASGNYH WNPF D + D+ + +D LKA CMILSGPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIWFLLLGGL +A LD+WAGH+ P VF LS+ GSFISYIYSAPP+KLKQNGW+GNYALGSSYISLPWWCGQAMFGELN Q V ILTLLYSWAGLGIAIVNDFKSVEGDR MGLQSLPVAFGV+KAKW+CV SIDATQ +AA+L Y G+ YAA LTAL+LPQ++ Q K+FL DPV DV+YQA+AQPFLV GIL TALAVGH Sbjct: 69 SFFPFEKSQMPFADPMAVEK-ESTVTLQ------AKKEANDGGAARQLLGVKGASETDNIWKIRLQLTKPVTWVPLIWGVVCGAAASGNYHTWNPF---DATVDVSACTEDALKAFVCMILSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIFQIWFLLLGGLGLAGALDLWAGHETPTVFLLSLFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPWWCGQAMFGELNWQ---------VCILTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGVDKAKWICVASIDATQAAVAAYLAYNGQYGYAAALTALILPQMYFQQKFFLKDPVEYDVQYQASAQPFLVLGILVTALAVGH 424
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: B7G006_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G006_PHATC) HSP 1 Score: 511 bits (1316), Expect = 1.310e-177 Identity = 255/390 (65.38%), Postives = 287/390 (73.59%), Query Frame = 1 Query: 112 HVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 H S K SFYPF S ST+ + + P P E E RQL+GLKGAS +I KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP D + LG +D LK MIL+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIW LLLGGL IAYGLDVWAGH+ P V LS+ GSFISYIYSAPP+KLKQNGW GNYALG+SYISLPWWCGQA+FG L D IL +LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFG++KAKW+C GS+ TQLG+AA+L +GE YA IL AL+LPQ++ Q LPDPV NDVKYQA+AQPFLVFGIL TAL +GHH F Sbjct: 45 HARHKSLRPPKTSSFYPFDESSTTSTKRPTTSGVSLQAKPGPNA-----EAEDGSAGVRQLLGLKGASAESNIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPLDPNDRNVMLGLEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHETPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGASYISLPWWCGQAVFGTL--------DKPVYFILPILYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGIDKAKWICAGSVTLTQLGVAAYLQTLGESLYAGILIALILPQMYFQATLLLPDPVENDVKYQASAQPFLVFGILATALCIGHHDF 421
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: A0A7S1ZAA9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAA9_TRICV) HSP 1 Score: 508 bits (1308), Expect = 2.360e-177 Identity = 254/379 (67.02%), Postives = 288/379 (75.99%), Query Frame = 1 Query: 145 PKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 P+SF PF S T P ++G ++ G RQL+GLKGAS T D KIRLQLTKPVTW+PL+WGV+CGAAASGNYHW WNPF D LG++D LK MIL+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIW LLLGGL IAYGLDVWAGH+FP V ALSV GSFISYIYSAPP+KLKQNGW GN+ALG+SYISLPWWCGQA+FGEL D IL +LYS AGLGIAIVNDFKS+EGDR +GL SLPVAFG++ AK++C GS+ TQLG+A +LY I EPTYAAIL AL+LPQ++ Q LPDPV NDVKYQA++QPFLVFGIL TAL VGHH F Sbjct: 2 PESFSPFADS-------------RRSETSLPASRGPNEKATDGSGDVRQLLGLKGASETTDKWKIRLQLTKPVTWVPLVWGVMCGAAASGNYHWMWNPFDPNDRDVLLGAEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHEFPTVLALSVFGSFISYIYSAPPLKLKQNGWAGNFALGASYISLPWWCGQAVFGEL--------DKPVYWILPILYSIAGLGIAIVNDFKSIEGDRALGLNSLPVAFGIDGAKYICAGSVTLTQLGVAGYLYSINEPTYAAILLALILPQIYFQATLLLPDPVENDVKYQASSQPFLVFGILATALCVGHHDF 359
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: A0A7S2Q1P8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1P8_9STRA) HSP 1 Score: 508 bits (1308), Expect = 1.260e-176 Identity = 259/390 (66.41%), Postives = 296/390 (75.90%), Query Frame = 1 Query: 115 VSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGV-TPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 +S + T ++ SFYPF PST S RL+A T E G+ + RQL+G+KGA+ ++DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNPF D LG +D K MIL+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLDVWAGHDFP V ALS+ GS++SYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL D IL +LYS AGLGIAIVNDFKSVEGDR+MGL SLPVAFG++ AK++C GS+ TQLG+AA+LY IGE YAA L AL+LPQ++ Q LPDPV NDVKYQA++QPF VFGIL TAL +GHH F Sbjct: 37 LSMLPTNNNNEDSFYPF-----PSTESSSNFRLDAKPPTSNDEVTDGSAD-------LRQLLGVKGAAGSEDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVMLGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGEL--------DRPVYFILPILYSIAGLGIAIVNDFKSVEGDRQMGLNSLPVAFGIDGAKYICAGSVTLTQLGVAAYLYSIGETNYAAGLLALLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 406
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: B8C067_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C067_THAPS) HSP 1 Score: 507 bits (1306), Expect = 1.850e-176 Identity = 254/377 (67.37%), Postives = 291/377 (77.19%), Query Frame = 1 Query: 151 SFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 SFYPF + S++ ++P P++ +G RQL+G+KGAS T DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNPF D + LG +D+ K MIL+GPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLDVWAGHDFP V ALS+ GS++SYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL D +L +LYS AGLGIAIVNDFKS+EGDRE+GLQSLPVAFGV+ AK++C GS+ TQLG+AA+L IGE TYAAIL L+LPQ++ Q LPDPV NDVKYQA++QPF VFGIL TAL +GHH F Sbjct: 43 SFYPFDKES--SSKLSAVP---------PKSNEEVSDGSAD---VRQLLGVKGASGTTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRNVMLGLEDMAKGFVAMILAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGEL--------DRPVYFVLPILYSIAGLGIAIVNDFKSIEGDRELGLQSLPVAFGVDGAKYICAGSVTLTQLGVAAYLQSIGETTYAAILLGLLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 397
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: A0A7S2URN7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URN7_9STRA) HSP 1 Score: 506 bits (1302), Expect = 3.290e-175 Identity = 253/380 (66.58%), Postives = 287/380 (75.53%), Query Frame = 1 Query: 151 SFYPFQRS--DAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTD-DILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 SF+PF+ D S + S + G P E G+ RQL+G+KGA + + +I KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNPF D LG +D K L MILSGPFLTG+ QTINDWYDRDIDAINEPYRPIPSG ISE +VI Q WFLLLGGL IAYGLDVW GH+ P V LS+ GSFISYIYSAPP+KLKQNGW GN+ALG+SYISLPWWCGQA+FGEL D +L +LYS AGLGIAIVNDFKS+EGDR MGLQSLPVAFGV+ AKW+C GS+ ATQLG+AA+LY +GEPTYAAIL AL+LPQV+ Q LPDP+ NDVKYQA+AQPFLVFGIL T L VGHH F Sbjct: 75 SFFPFEEDSLDGSSKKSSSALLMAKGDAPNEEASDGSA-------GVRQLLGVKGAGSDETNIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVALGLEDTAKGLVAMILSGPFLTGFCQTINDWYDRDIDAINEPYRPIPSGKISEGEVIFQAWFLLLGGLGIAYGLDVWCGHELPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNFALGASYISLPWWCGQAVFGEL--------DRPVYFVLPILYSIAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGVDTAKWICAGSVTATQLGVAAYLYSLGEPTYAAILLALILPQVYFQATLLLPDPIANDVKYQASAQPFLVFGILATGLCVGHHDF 439
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: A0A6V1M160_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M160_HETAK) HSP 1 Score: 502 bits (1292), Expect = 2.220e-174 Identity = 251/380 (66.05%), Postives = 294/380 (77.37%), Query Frame = 1 Query: 139 DKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFG---GGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGH 1269 DK K+F+PF+ S ST+ L A K E + G +QL+G++GAS TDD+L+IR+QLTKPVTWIPLIWGV+CGAAASGNY W NP G V D G D K + CMIL+GPFLTG+TQTINDWYDR+IDAINEP RPIPSG ISE++VI QIWFLLLGGL +AYG+DVW GHD P VF LSV GSFISYIYSAPP+KLKQ+ W+GNYALG+SYI+LPWWCGQA FGEL +VV+LT+LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFGVEKAKW+CV +ID TQL +AA+LY+ G+PTY +L LVLPQ+ Q KY +PDP+ NDVKYQA+AQPFLVFGILTTALA+GH Sbjct: 40 DKSKTFFPFESSMPSSTQ------LMA--------KKDDSEEKDDRGDLKQLLGIRGASETDDVLRIRIQLTKPVTWIPLIWGVICGAAASGNYEWSNPLTVGMEGHVPLDKGLSDFAKVVTCMILAGPFLTGFTQTINDWYDREIDAINEPNRPIPSGKISEEEVIGQIWFLLLGGLGLAYGIDVWVGHDVPTVFLLSVFGSFISYIYSAPPLKLKQS-WVGNYALGASYIALPWWCGQAAFGELTW---------DVVVLTVLYSLAGLGIAIVNDFKSIEGDRALGLQSLPVAFGVEKAKWICVSTIDVTQLAVAAYLYWSGQPTYGLVLLGLVLPQIALQAKYLIPDPINNDVKYQASAQPFLVFGILTTALAIGH 395
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Match: K0RLR8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RLR8_THAOC) HSP 1 Score: 501 bits (1290), Expect = 8.450e-174 Identity = 254/382 (66.49%), Postives = 284/382 (74.35%), Query Frame = 1 Query: 136 DDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQARAHLDLSNVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1278 D S+YPF S S RL + P++ +G RQL+GLKGAS T DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNPF D LG +D K MIL+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLD WAGHD P V LS+ GSFISYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL D IL +LYS AGLGIAIVNDFKSVEGDR++GLQSLPVAFG++ AKW+C GS+ TQLG+AA+L I E TYAAIL L+LPQ++ Q +PDPV NDVKYQA++QPF VFGIL TAL +GHH F Sbjct: 49 DSTRASYYPFGAST-------SSDRLISLSARPPKSNEEVTDGSAN---VRQLLGLKGASETTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVMLGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIAQIWFLLLGGLGIAYGLDAWAGHDVPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGEL--------DRPVYFILPILYSIAGLGIAIVNDFKSVEGDRQLGLQSLPVAFGIDTAKWICAGSVTVTQLGVAAYLQSINETTYAAILMGLLLPQIYYQATLLIPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 412 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1095.658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1095.658.1 >prot_E-siliculosus-1a_F_contig1095.658.1 ID=prot_E-siliculosus-1a_F_contig1095.658.1|Name=mRNA_E-siliculosus-1a_F_contig1095.658.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=427bp MVSPWVVASVGALSVGGAGAFHVPVLPSARATPAANRHVSRMSTADDKPKback to top mRNA from alignment at E-siliculosus-1a_F_contig1095:31377..36614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1095.658.1 ID=mRNA_E-siliculosus-1a_F_contig1095.658.1|Name=mRNA_E-siliculosus-1a_F_contig1095.658.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5238bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1095:31377..36614- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1095:31377..36614- >mRNA_E-siliculosus-1a_F_contig1095.658.1 ID=mRNA_E-siliculosus-1a_F_contig1095.658.1|Name=mRNA_E-siliculosus-1a_F_contig1095.658.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2562bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1095:31377..36614- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |