Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
D7G6S0_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S0_ECTSI)
HSP 1 Score: 736 bits (1900), Expect = 5.820e-254
Identity = 453/465 (97.42%), Postives = 454/465 (97.63%), Query Frame = 1
Query: 625 MPQQYGQXXXXXXXXXXXXPPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPLQSFYPPSLYGVPPSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXAGGNFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTTHFRQPLLPGHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXXQGDASATEVGIDSGPRGASTGGGDKYGARSNDHPHLAYIYRGRGTAADETGGYPSAGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPASSVGGSAASPDPKGVSRARSSSPSAAANAALPHQSLEHAMQTKLTM 2019
MPQQYGQ XXXX PPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAP+QSFYPPSLYGVP SVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXAGGNFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTTHFRQPLLPGHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXX QGDASATEVGIDSGPRGASTGGGDKYGARSNDHPHLAYIYRGRGTA DETGGYPSAGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPASSVGGSAASPDPKGVSRARSSSPSAAANAALPHQSLEHAMQTKLTM
Sbjct: 1 MPQQYGQQXXXXADGYGGPPPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPMQSFYPPSLYGVPTSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXAGGNFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTTHFRQPLLPGHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXX-QGDASATEVGIDSGPRGASTGGGDKYGARSNDHPHLAYIYRGRGTA-DETGGYPSAGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPASSVGGSAASPDPKGVSRARSSSPSAAANAALPHQSLEHAMQTKLTM 463
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
A0A6H5L5J0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J0_9PHAE)
HSP 1 Score: 531 bits (1368), Expect = 1.770e-176
Identity = 316/328 (96.34%), Postives = 319/328 (97.26%), Query Frame = 1
Query: 1075 TTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTTHFRQPLLPGHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXXQGDASATEVGIDSGPRGASTGGGDKYGARSNDHPHLAYIYRGRGTAADETGGYPSAGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPASSVGGSAASPDPKGVSRARSSSPSAAANAALPHQSLEHAMQTKLTMGGNGSPPSAAQPS 2058
T L GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQT HFRQPLLP HNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXXQGDASAT+VGID+GPRGASTGGGDKYGA SNDHPHLAYIYRGRGTAADETGGYPSAGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAP SSVGGSAASPDPKGVSRARSSSP AAANAALPHQSLEHAMQTKLT+GGNGSPPSAAQPS
Sbjct: 6 TGDGLAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTAHFRQPLLPAHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXXQGDASATDVGIDAGPRGASTGGGDKYGAHSNDHPHLAYIYRGRGTAADETGGYPSAGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPTSSVGGSAASPDPKGVSRARSSSPGAAANAALPHQSLEHAMQTKLTIGGNGSPPSAAQPS 333
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
A0A6H5L539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L539_9PHAE)
HSP 1 Score: 186 bits (472), Expect = 2.120e-50
Identity = 122/149 (81.88%), Postives = 127/149 (85.23%), Query Frame = 1
Query: 682 PPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPLQSFYPPSLYGVPPSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXAGGNFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHI 1128
PPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPLQSFYPPSLYGVPPSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXX GGNFYAG+ + G+P +T LF+ HI
Sbjct: 18 PPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPLQSFYPPSLYGVPPSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXXGGNFYAGE-----DRSIGRPTKTAGKTN-----RLFLIHI 156
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
A0A7S2V9D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9D2_9STRA)
HSP 1 Score: 148 bits (373), Expect = 1.170e-37
Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 1
Query: 1057 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
PG PIQTT QGP+GCNLFVFHIPN+MTN L+ LF +FGNV+SARIMVEK TGRSRGFGF+SYDN SA+ AI MNG+QI HKRLKVQHKKDK
Sbjct: 41 PGAPIQTTPLGQGPEGCNLFVFHIPNSMTNVDLYHLFLRFGNVVSARIMVEKHTGRSRGFGFISYDNAVSAKDAIKGMNGFQIGHKRLKVQHKKDK 136
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
K3WGX7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX7_GLOUD)
HSP 1 Score: 148 bits (374), Expect = 2.060e-36
Identity = 77/109 (70.64%), Postives = 86/109 (78.90%), Query Frame = 1
Query: 1021 YAGQGGYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
YA GYA + PG PIQTT + QGP GCNLFVFHIPN MTN+ LF F+ FGNVISARIMVEK TGRSRGFGFVSYDN SA+ AI+ MNG+Q+ KRLKVQHKK+K
Sbjct: 116 YAQPYGYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIAGMNGFQVGRKRLKVQHKKEK 224
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
A0A8K1CK88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK88_PYTOL)
HSP 1 Score: 147 bits (372), Expect = 3.810e-36
Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 1
Query: 1036 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
GYA + PG PIQTT + QGP GCNLFVFHIPN MTN+ LF F+ +GNVISARIMVEK TGRSRGFGFVSYDN SAE+AI MNG+Q+ KRLKVQHKK+K
Sbjct: 113 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFAPYGNVISARIMVEKETGRSRGFGFVSYDNAASAEQAIKAMNGFQVGRKRLKVQHKKEK 216
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
D0NCQ3_PHYIT (CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phytophthora TaxID=4783 RepID=D0NCQ3_PHYIT)
HSP 1 Score: 147 bits (370), Expect = 1.010e-35
Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 1
Query: 1057 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
PG PIQTT + QGP GCNLFVFHIPN MTN+ LF F+ FGNVISARIMVEK TGRSRGFGFVSYDN SAE AI MNG+Q+ KRLKVQHKK+K
Sbjct: 133 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEK 228
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
A0A024URK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URK9_9STRA)
HSP 1 Score: 147 bits (371), Expect = 1.080e-35
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 1057 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
PG PIQTT + QGP GCNLFVFHIPN MTN+ LF F FGNVISARIMVEK TGRSRGFGFVSYDN SA+ AI MNGYQ+ KRLKVQHKK+K
Sbjct: 159 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFQSFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGYQVGRKRLKVQHKKEK 254
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
G4ZPR3_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPR3_PHYSP)
HSP 1 Score: 147 bits (370), Expect = 1.120e-35
Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 1
Query: 1057 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
PG PIQTT + QGP GCNLFVFHIPN MTN+ LF F+ FGNVISARIMVEK TGRSRGFGFVSYDN SAE AI MNG+Q+ KRLKVQHKK+K
Sbjct: 135 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEK 230
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Match:
H3GBP4_PHYRM (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GBP4_PHYRM)
HSP 1 Score: 147 bits (370), Expect = 1.360e-35
Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 1
Query: 1057 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 1344
PG PIQTT + QGP GCNLFVFHIPN MTN+ LF F+ FGNVISARIMVEK TGRSRGFGFVSYDN SAE AI MNG+Q+ KRLKVQHKK+K
Sbjct: 142 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEK 237
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1095.656.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 5.82e-254 / Id = 97.42 Expect = 1.77e-176 / Id = 96.34 Expect = 2.12e-50 / Id = 81.88 Expect = 1.17e-37 / Id = 76.04 Expect = 2.06e-36 / Id = 70.64 Expect = 3.81e-36 / Id = 72.12 Expect = 1.01e-35 / Id = 76.04 Expect = 1.08e-35 / Id = 76.04 Expect = 1.12e-35 / Id = 76.04 Expect = 1.36e-35 / Id = 76.04 Sequence D7G6S0_ECTSI A0A6H5L5J0_9PHAE A0A6H5L539_9PHAE A0A7S2V9D2_9STRA K3WGX7_GLOUD A0A8K1CK88_PYTOL D0NCQ3_PHYIT A0A024URK9_9STRA G4ZPR3_PHYSP H3GBP4_PHYRM Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1569 Model size 3590 Exons 10 Ec32 ortholog Ec-26_000340.2 Ec32 ortholog description Nucleotide-binding alpha-beta plait domain Hectar predicted targeting category other localisation BRITE ko00000,ko03041 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. E Ec32 ortholog Ec-26_000340.1 EggNOG OGs KOG0144@1,KOG0146@2759 EggNOG free text desc. positive regulation of mRNA splicing, via spliceosome GOs GO:0000003,GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000900,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0008150,GO:0008152,GO:0008380,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019219,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030371,GO:0031047,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0035194,GO:0036002,GO:0040029,GO:0042835,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0045182,GO:0046483,GO:0048468,GO:0048519,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904,GO:2000112,GO:2000113 KEGG ko ko:K13207 Seed eggNOG ortholog 2880.D7G6S0 Seed ortholog evalue 6e-211 Seed ortholog score 740.3 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1095.656.1
>prot_E-siliculosus-1a_F_contig1095.656.1 ID=prot_E-siliculosus-1a_F_contig1095.656.1|Name=mRNA_E-siliculosus-1a_F_contig1095.656.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=523bp
MSYQQQHQGAPDGSRRQQQAPPFPLLGTNGAAAAGRAPAAGVYGMPQQYG back to top mRNA from alignment at E-siliculosus-1a_F_contig1095:7934..19906-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1095.656.1 ID=mRNA_E-siliculosus-1a_F_contig1095.656.1|Name=mRNA_E-siliculosus-1a_F_contig1095.656.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11973bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1095:7934..19906- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)TACAGAAAAACTTTGCCCTGCTGACCTGGGCGGATTGGAGACCAGCCCCA
TCGCACACCTCACCTATTCCCTCCCCATCCCCTTCTACTACAGACCCTCA
GACTTCGGTCACTGCTGTGATCACCCAGCGGGAGAGCGGCAGCAAGCAAG
CAGCAGCGCTTTGCGCACAGAGGACTGTTGTGCCCAAGAAACCTTTCGAC
TCTCTTCTCCCCCAAGCCGAGGCCTTTCTTTTCTGCGCCAAACCAGAAAT
CTCCGCACGACGCACGCCAGCCCCCCAGCCCTCGTAGCCCTCCTACCAAA
CTTGCAATATACCACACTCCAAGCCACACCCAGGCCTGCCTAGCGACCAC
GCGCGGGACAGGGCAGCGCGCCTCTAAGTTTCATATAAGGCACCGGCGAG
GCCCGCGGCTCGCGGCTTGAAGGGGAGGTTTGCAGCGCCTGCATCTCCGA
GCGAAGAGCGGTTAGGTGTGTATCGTAGGAAAAGCAAGAAGC ATGAGCTA
CCAGCAACAACATCAGGGCGCGCCCGATGGCAGCCGGCGGCAACAACAAG
CCCCACCTTTCCCTCTCTTGGGCACAAACGGCGCCGCAGCAGCAGGGCGA
GCACCAGCAGCCGGAGTGTACGGCATGCCACAGCAGTACGGGCAGCAGCA
G GTGACCGTCTGGCTGGCTGGCTCTGGCTTGCGCAGGCTGTCTGTGCATA
TCTTTTGTTGAAGAAAGGAAGGAAGGTCGTGTGTGTCCGCTCTCTCTCTC
TGGGTCCAGCTTGTGTTCCAAGCGATTTGTTGCTCTCCCCCGTGTGTGCA
TGTCCAACTCTTTTTTTTTTGCCGTACACCCCCTGCCCGCCGTCTGCTGC
TCTCTCTCCCTTCAGCAGCAACAAGCTGATGGCTACGGTGGACCCCCTCC
GTCGCCGGTGGTGGCTGGCAGCTGGGGAGAGAGGACGGGCTATGTAGAGG
AAGGGTACATGAGACAGGACCCTAACATCGTCGCGGGGGCGGGAACCCCG
ATCGCATCGACAACCTCTGGGAACGGTGAAGGAACGTTCATGGTGTCCAC
GGGCGG GTGAGCACACACGGTTGAAAGCAGCAGCAGCAGCAGCAGCAGAC
GGGTGATGCTGGCAAGAGCATGTCACCCTTTTGCACAGCAGAGAAGCGTG
CCTGCTTGCGGTGCATATTTATGTAGTGCACACCAGCAGGGTCGTGCACG
GCCTGTTCAGAGATATGTAGTAGATGCGTCCACATCCCGGAGTGAGCGGC
ATGTCGTGTTTTTTGCTTCTCGTGTGATCGTCTTCATAACGACGTGTGTC
GCTCCTATCTGTCCGGATTTTATTATATTTTTCGGTTTTAATTGCTGCCC
GTCTTGTTCTTCTCTCTCTCCGCTGCCTCTCGATCCGACTACCGATGCGC
TCGCGTGTGTGTGTATGATGGCCGCACGGTGGCTGCCCAATCGTTGCTGG
TAGGATCGCGCTCGACGCTCTTCAACAAGATCCATGCCGCCAAAGCCTCT
CCCCCAAAACGGTGTGCTGCACACGCAGCGCCTAACAATGGATTCCGTTC
GCTCCTTTGCGATCTTACTACTTGCTCGATGTGTGTTCGGCTGATACTAT
GGTCCTTGTCCTTGTGTGTTTTTGTAAATTTGTTTTGGCGGCAGCGCGAA
CGCTATGGGAGCGCCGCTGCAGTCGTTCTACCCGCCGTCCTTGTACGGCG
TGCCTCCTTCAGTCTACCCTTACCAGCAGCCTGGAGCGTTCCCTGGGCCT
TACGGTGGCGGGGCGGGCGGCGGCGCGGGAGGCACTGCGGGAGGCGCTGG
GTCAACGGCTGGAGGAAACTTTTACGCCG GTGAGGACAGATCGATCGGTC
GACCGACCACCGAGACACAGCGGGCAAACCAATTGTCTCTTTTTGATCCA
CATCATGTGTTCACGTCCGGTCGGCCGCACGCGGTGCTCGGGAGGACGCT
GCCCCCAGTCCTAGCGCGTGCCACAAACATCCCGATAATCGGAAACCGAT
ACACATCGGTGCAGTTTTGGCGTAACGGAACGGGCAAAAAACTGCCACCC
GGACCGGACTGACACCGGCAGCCGTGGATACAAGTTTGGGGATCGAGGTT
TTTGTAGTTTGTTTCCCGGAAACGAGTGTGACATACATACATACAGTATT
AAGTTTCGCGGACTTGCCGTACCCCCTCTCTGCCTTGCTGCTCTCGGTGT
CCCGCCGGGCGCTAAAAAAAGGGCTTGTGTCTGATCTATGTGCAGTCGGC
AGGCAGATGGGGCGCTGTCGATCGATATATTCGTGATGTGCATGCGACAG
CCGCGGTTGTCCCGGCCGGCCGGACATGTAGACTATTGTCAACTCTATTA
TGTTTTGGTTTTATACTGCACAGCGCGGTCGCGCCCCGCGTGATGAAAAC
AGGCCCCAAAGCTTCGTCGGCAAAAGTTTTGCTGCCGCTGCGTCGTCCAT
ACACGACCATGCATGCCTCCGGCGCCCGCATCACCAACGTACGCCGATTG
TTCGAACATATGCTATACACCACATTTCCACCAAGAATGCCACTGGGTCG
GTTAGCCGCTATTTTTGGCCCATGGCCCTTTTTTGTGCGGTCGGGAGTAG
TGCCACCACCAGCAGCGAAGAGGGTGGAGCTTCGCACCAGGAACATGAAC
TTCTGCTGTCTGTCGCCGTCGGTGAACCAAGGCGTTCGGGAAGGCCGGCT
TGCCCACGGGCCGGTTACGGACCCCGAACCCTGGCTAAAATTTTGTTTAT
TTCCCATTTGTCGTCGTGTGTTTTCTCTCCATACCGTGGCCATCTTTTGG
CTTCGACGACGCCGGCCGGGAGAACAGGCCAGGGTGGTTACGCTAGGAGC
ACTAACCCGGGCCAGCCCATCCAAACCACGACCAACCTCCAAG GTACGAT
ACGAACGATGTATAGATAGGCCAGAGGCATCTATCTTATCTAGGCAGCAG
CTCTTCTTCTTGCGTTTCGTCAGCCGGCAGAATTTTCATTCCGCGTTCGT
TCGTGCGTTGGTTTTTGTTTCCAAACAAAAAAAGAATGCTTGTTGGGTGT
CTACAGTCAAGGCTTATGTTTTCGGGAGGCCGAGGTCTGCGTGCTTGGCT
CCCCACGATTGCGTGATGTACTGTAATTCCGAGGGCAGTCCCTAGTTGAT
TTTGGTCCAAGGACGTTGAGAGTCGTTTAGATTTTTTTCTTCCCGTGGCT
GCATGCAGTCCATGGTCAACCTTATTGCGAGGGAGTGCTTGCTCCCCGGC
CCAAATAATCGTTTTTCCGACGGGTTGTTTGTTGTTCGGGTTCGGGGAAT
ACATTCACATGGACAGAAAAATTAGTTCCTGTTCGAAGAGCGAGAGATAG
ATATACCGACTGAAGGCTTGTGTGTCAAATTGGATTCCAGCTATCATCGC
GCAGCTGGCGACGAATGAATGATGTCGCCCGCGCGTGTACGACGAATTTT
TTCGTGCGAAACATCGACACACTCTTCTTGTGTCCTTTGTGGGTTGGTCA
CCGTCTCATGCCTACATGAGAACACAACGCTCCGCAAACCTTTTGTTCCT
TGCATGCATGCGTGCGATGATGATGATGATGATGATGATGATGGTGATGC
GAGAGCAGCGTTCGTTACTTGTGCGACGAGCGAGCGTTCAGACCTCAAAA
TGCTCCTACAGGAGAGAAGAAAAAGTGATGCGGGGTTGATGTTTTTTCGT
GTGCCGACGACTTGTACATGAAGGTGCAGCACACGGCTTAGTTACGGACT
TTTCCTCGGACAATAATACTCGTGCCTGTGAATGCCCTATACGCGTTTTC
GTGTAGGACCCGAGTACATTCGTACAACGTGCATTTTTGCATCGCAGCGG
TTTCATGGACCCGTTTTGTACCTCGTGCAATTTCATGTTCGTCTTGTATC
TGTCTCGCTTTTCTTTTTATGTCTCCTGCCATGGCCGTCAGAACATTTGT
ACAGCTCTGTACACAGACGTCGCCTGTGGACCCGCCACACTATTGTAGAC
GTAGATTATGAGCCACGCTCACCATTTTGTTAGCACGTGTTGCCTCATTG
TTGGAAGCGTGAGGCAATCAATCATTCAATCAATCGATCGAAACGATTCT
CTATGCTTATACCTACCCGAGAGAGGCATCAATGTTACATTCACATCCGT
CCGTCCTGATGTTGAGATACCCTTTGTTTGTCATGCCACGGCGGCGTTCC
GGTGCATACCACTCCAACGCTGGACGGATTGGCAGGGCCGGACGGGTGCA
ACCTGTTTGTCTTCCACATCCCCAACACCATGACCAACGAAGCCCTGTTC
CGTCTCTTCTCCAAGTTCGGGAACGTCATCAGCGCTCGCATCATGGTCGA
GAAGGCTACGGGCCGCAGCAGGGGCTTCG GTGAGAAAACACACGGCGGAG
CCGACAGAGGCTTTTTATTGGCGGCCGGCCGGGCACCATGCGCCTTTTGT
TTCGCTTTGGTGTTCAGTTGAGCTCGTTTGTGGTACTCAAGGGATCTCGA
CCGCTTACCACTGACGCATGGTTATCCAGCCTCCCCCACCTACGCTTTCG
GAGAGACAGCCAGCACGAAACCGGCCGCCTCGCCTTTGCCGTGGTATCAC
TACATCTACAGGATTGTCATCACATCATCCGTTTTGTGGTACTTCCGCCC
TGGTGCCCGAAAAAAAACACTTGCTGCCTGCGTACCATGCGCGTGCTCTT
CTTCGCGCGTGCATGCGCGCGCGCCTAGTTTTGTGTGTGAGGCAGGCGAC
TTGCTCCCAACCGAAGAAAAATTACGCAATTGTTTAATCGGGATTTGTTT
GCGAATTCCCGTTTCGCCGTGGTGCTTCCGTCTGTCCCCATACGGCCCTT
TCGCCCCCCCCGACGGCTGGCGTGGGGTCTGGTTGGTTTCACCATGTGTG
CATGTGCTACATATCAACCTGTGGTTGGCGACCGGACCGCCAGGGTTTGT
GAGCTACGATAACAGAGACTCCGCGGAGAAGGCTATATCTCAGATGAACG
GGTACCAG GTGTGTGGCTGTGGTTGTGTGTCACGCGCGCGAGACTTGGTA
TGCCCGGACCAGGTCACGCAGCCGTAGAGTAAAGGTTAAGTGTGAATGGT
CTATGGTCTTGGTGGGCAAGTCGAGGAGGGAGGGAGAAGACTGCTGTTTT
GTAGCGCAGGGAGGTAGGTTTATGCGTCCTTGAAAATGTTGAGACAGCAG
TTTCGGTACGCTACTGCTGTGCCGAGGTCCCCACACGCACGTGCACCAAC
GTGAAAAACACGACGTCACGCAGAAAACTGCATGAGAGATGTGCATGCAA
GGAGAGACAACCACATGAGCTACGATGTTGTACCAACAACCGGCGAGACT
TCTGCATCGCATGGGCGGCACCCCTGCTGCGGCCGTGCGCATCATCGGAT
GCTGGTTGGCAGCAAACTTCTCGCAAGAAACGCAATCCTGCGAGCACCGA
ACACCACGATTATTTTTTTGGTGGTATTTACCTACGGACGGTCCGCACGC
AACCACTGGTCGCGTGACTTGTGTCAAGTGAAGATACACATGGTAGATTG
ACTTTTGTCAAGTGAACATCGATGGTGACTTGTGTCTAGTGAACGTGTTC
GCAATTAGACACCAGAAGGAAAATGTCAGGCGTTAATTTATCGCCCGCCC
GCCCAGTTCCTTGGCGCTAGGTTAACCCCCCCCCCCCCCCCCCCCCCCCC
CGCGCCCCCCTCCCCACCGACCCTGCCGCTGCCACGAAATGCGAAACAAA
TAACGATGTTGACAAGATAATCCCTCTCTGGCCTCTCGCCCCTTCCCTCC
CCTTCCCGGGCGAAACCAACCCATAACAGAACTCATCTATGCATCAGATA
TCATCCCATATATTAGTATAGTCAACGATAACTCATCTCTTGGTAGTACT
GTACCACATGGTTATATATAAACTGCTTGTGCTTCACGTGTGTGTCACGC
ATGCATGACAGATCGAACACAAGCGCCTCAAGGTCCAGCACAAGAAGGAC
AAGGAGAGGGAGAGGTACGTGACGGCCCCCTCTCCTCGGATGATGGGACC
GGGCGTCGCCGCTGGCAGGATGCAGCAGACCACCCACTTCCGCCAGCCGC
TCCTGCCCGGGCACAACGCGGGCCTTCGGCACCACCAG GTAAGCGAGCGA
CCTGGCATTGTCTCGAGCGGGGTTGTCCTGAGTACTGCTTGTACCACGTG
GCACAGCAGTAGTTGTTGAGCTGAGCTGAGTCTTGCTGTAAACCTTTGGC
CTTGTTGACGACAAATGGCTCCTCAAGTTTTTTCCACACGGCATGTGTGG
TGCGTGTGCGCACTGCTGGCGCCGCGAAGGTTTGATCACACACACAAGTC
ACGGTGGCCAATGATGATACCGCAATGATGAGACCTTGTGCGTTGTTCGA
CCTGTTTGCACCCGAAGTTATCGGAACCGTATTGGAGTCGTGTTGCTAAT
CAAAGAGATTGTGGTTAACTTGGGTCCGAGTCCTGCCGGAGTGACTTCTG
CTGAAGGAAAGAAAAAGAAAGAGAGTTCCCTCGACAGAAGTCGTCGTGTA
GTGCGAGATGATCGATGAATCGCTGGATGCCCCACGTGATTGTTGCTTGT
GTCGTCAAAAGTTGAAGTAGATCGTGGTTTGCTTGATCTTTGCAGGCAGT
CTGGTGGGTGCCCGCTTTCGAGCGATCCGGAAACTTGGAACAGTATCTCG
GTTTCTTTCTCGCGCGTGACACGTCTTGTGACCTCTTGTCTCGGACGCTA
CATAGAAGCGTAGAACATGACCTTCTCTAGTATTGCACCCGTTAAACCGA
TAACATCCCCCAGTATGTAGAACGAACGCAATGCATGCTGCGGTTGATCT
CACGGTGGTGTTCTATCCGCTCGAGACGATGTTGAAATAGCCTCAAATGC
ATTTGTTATTCCGGAAGGCACGTCGCCCTGTTTGGCGTACGCTCCTGTCT
CTCCTTAGTTTATTCCTCTGCGTCACTCTCAGCGAAAGCTGCTTTGCTCG
CTTCGACGATCTCTAATTATGTTTTTTGTGCTGCTGGTGCTGGTGCTGCT
GCTGGTGCTACCTCGTACACCGGGCTTTTGTTTCACGAAGCCCTGCTGTG
TACCAGCTGCCGTGTACCTGCTGTTCGGTGCATCGCTATTTAGCCACCAG
TGGTATTCAGCAAGTTGGGACACCATCCCCTAACACGGAACCCGAACAAA
TAATTCGCTGACGAGTAGATATATTATATGTTTTAAATGGTTGCCCGGTT
GCCCCGTCTATTTCCCGACGACACGATTCGACAGCAGTACTATGCGAAGA
AATATGTCGAGCATAGCAGCATAGCGCCCCGTTCCGTTTTCCCTGGCGGC
TGCTGACAAAACACACACGCACGTGCACACTTGTTCCACAGGGCGGAGAC
GACAAGCTGCCGCCCCCATCCCCGGCGGCGGACACGGGAGGCGCGGGCGT
CGCGCCGGGCTTCACCGTCTCCGGCGGCGGTGGCGGCGGAGGCGGTGGCG
GCGGCGGCGAGGATGACCACCACCAAGGCGACGCCTCCGCCACCGAGGTG
GGAATCGACTCCGGCCCGCGGGGGGCTAGCACGGGTGGCGGGGACAAGTA
TGGCGCACGCTCGAACGACCACCCGCACCTGGCGTATATTTACCGGGGGC
GGGGCACCGCGGCGGACGAGACCGGCGGGTACCCCTCGGCCGGCGGCGGC
GTCGACGGCAAGGCGGCTGGGGACGAGAAGCCTCAAGACCAG GTGAATAG
ATACCATGCATGGTACCGATATGGGGTAGACAACGACACCGTCAATTTGA
CGCTTGGTAGTGAATACGTAGCACGCGCGTAAAGTGACGCTTGGTGGATG
AGAGGCTGACGTGACGCTCCCCCTCGATGGGGTAGCGGTCTGTCTCCTCT
CCTGAGCCTTTGCGTGAGTGGCATGTGGCATGGGGCATGTCCCGCTTCGG
CGGGTGGTGTGTCGCTCGGCTGCCTTCCGCGAGTTGGTTGCCAATTGTTC
GAAGTGCCGCCCGCCCACCTGTCGCCCACTGTAGTGTGTTGGATGAACGC
GCGCGATGTGCTGGGCTGCTGATTTCCTTGTGCAAGTGATCGGCCGAGTG
TCGAAGTTTCGGACTTCCAGGACCGCTTTTTGCTGGGGAGCTGCGCACAA
CCAACCGTCGATCTTGTACGGGTCTCCGCATGATTGTCTCCCTCTTTCAC
CCTCATCGATTGGGCATCAGTCGCTACTGTTCTACTATTTTCCAACAGCG
CCCAAAAGTGCACATGAGCACTGCTGTCGGTTTTGTCTGAGTGCGTAACT
TCGTTTTTCGACGCTATGAGTATATATTTCAGCGTCCACGCAACCCCCAG
GTCTATCTCAGTCTCGGTTGTTCCTCCCCATATCGGCAAAAAGTGTAGCA
CTTGAATCGTGCACAAGACACGAGTCACAGCTCATGCCTCCTTGCGTGCA
ATCGGGTCACGGCTGTGAGAGACGGACCTAGGGGGTAGCTTCTTTTTTTC
TGAAGTTCGTTTTCAAGATGACGCGATGAGAAGCTCTCTTCCTCACGGCC
GTTGTGATTTCTAGCCCTGCTGACCGTAGCGCATGTGTAGAAGGTAGGTG
CATGTCGGTGCGTCATCTGCACTGCTTTCTTCAATGCGACCCGTGAGACT
CCGCACAGGGACAAGAAAAGGCCGCCAGCATTACCATACTCTGGTCCGGT
CGTCTCCTCAATGCTTTCACGGGCACTCAACGGCAACCCCCCCCCCCCCC
CCCTTCTCCGCCTGCTGCTGCTACCCTTGGCGCCCTCCCTCCCCACCGAC
ACGGTCCGTTCCAGGACTCGGGATACCACGGGCGCGACGACTCGGCGTAC
ATGGCGGCCCCGGCGTCCAGCGTGGGAGGCAGCGCCGCCAGCCCGGACCC
CAAGGGAGTATCGAGGGCCAGGTCTTCAAGCCCTAGCGCGGCGGCGAACG
CTGCTCTGCCGCACCAGTCTCTGGAACACGCTATGCAGACCAAGCTCACG
ATGG GTAAGAGGCGTTGGGAGGCCCAGGGGGCGGGATTTTGTGTGTGTTC
CCCGAAAGGGATCCTGATGCTGGGTACTGTTTCTTTTTGTGTCGTGTAAA
GTGTCTGTGTTGCCTGTTGAAGATCGGAGAGTGCTACTCCCGGTGGAGCA
TTGAGGTGCCCGGAATGCGATCAAGTCGTGGCGCTCCGCTATAAGATCTA
AGAGGGTGGTGTGACAAAAGGCCCTCGACGCTCTTATATCGGAGCCTCCT
CTAATAAGGGAAGAATACTCAGCTATACTAAACGGGTGGAGTCCGTGACA
AGCAAGTTCGATCATGTTGTATCGGTGCCCCCTCTTGTGAGGTACCGTCT
TGTATCTGATGCACGACTGTACCTGGGAACGTGGGGACGCGGTGATGTCG
TGTCTTTTCGTATCGTAGACCCGTGTCGTCATTGTAGGCCTGCGGCGGAC
AGTCGAACGGAGGCAAGACGACTTAACGATAGCCCTGCTAGACTCTCAGG
GCGTGTCTTTACCCCACCTTCCTTCGCAGGCAGGGGATATCATTCGAGAG
TAATTGCCTGATTGACAGCCCCCGATTAATTCGGTTGGTTCCCTTGAAGA
GGTCACGACCCCCCCCCTGCTGCCTCTATTATAGTGTCCCCGCCGCAATG
GACTCGTTCACTTTCCTGAAACGTAGAGGCAGGAGGGAAACGGGCACGAA
AAGGCCCGTATACGTATCTATCTACTTGCCTCTCTGTGCTTCGTGGTGCC
GTGTGGGTCGGGATGATGGATGATGGATGATGGATGATGATGATTAGATT
GTTCTGTATATCGCTGCTACGGCTGTTGGCCGCCATTTCTGCATATCTGC
CATCGGTTTTCAGCGTCAGGGGGCGTTCGAACCCTAGGGTTCGGTTGGAA
GTTAGTCCGAAATTTGTCGGTGACATCACCTCCAGGTTTAGGACTAGTTT
GGGTTGACGACAGGCAGCGCCAAGGCCATTTTCACTCGTGCCGGGCACAT
GCAGCACGCCTTTGCACGCTCTCACTCTCCGTCTGCCTCTGTCTCCTCCA
CTAACGGCATACACTGTGCACCAAAGACCAGTGCAACGCCTACCTACAGC
TAGGCTGGGCATGCTCCCAAGTGGCGCTCATGCGCGTGGTATCGTTCCAT
GCAGCGTGTATGGAGTGCCTGCCTAACTGTGTTGTCGTCGGGTGCGCTAT
GGAATACTCCAACAGGGGAGCAGAGAAGTTCCAAGACCCCTGTTGCTTCT
TGCTGCTTTCCAGATTCAGCTTCGCTACTGAATGCAAGTTGCCGTTAGGT
GACCCCCGATCCCCCGTCTCTCACACTCTTCCCCCCCTCCCGCCCCCTGC
GCTCTTTGGTTGTTTTCTATTTGTTGGTGGGACGGAATCGAATCGAACCT
AAGGAGGGAACGGAAGCCCGCCTTCCGCCGCGCAGCCCTCGTGA TGAGGG
ATGGAGGATGATCAGATAACAAGAGAGAGAAAAGGGGGCCCGAAAGAAGG
GCCGACAACATCACCCCATGCCCCGAGTTGAAGACATTTGAAGACGGCCC
TTGGTATGCTGGCGGCTCTTGTTGCCAGGACGAAACAGGTTGGCCGCAGC
TTTCATCTCGCCCCTCCTTACTTGACTTCCCCCGCCCCGCCGAGCTGTGC
GCTTGAGACGCGATCGATGGATGCGTTGGTGGGCCTTGTGTGCGAGTCAG
AGTCAGAGTCAGAGTCAGGTGTTTACAGTTTAGTTTTGGTGTGTGGTGTG
GTGTTGAGTGCGGGCATGCGGGGTGGGGCGGCGGACGGGTGGTGTTGTTG
TTGATGCCGTTGTCAAAGCAATTGTGCCGGATAAGGGGAGGAGGCGAAGA
AGTGAACTGCGGTGCTGATGCGACCGTTTTCTTTTTTCTTTTTCGGCCGT
CCCTTGCACTCGGAGCGATTTGTTTTTTCGTGCCCCCAAGGGGTGGGGTG
GTGTGAGGTGTAACTCTCTCTTCCCTTGTTCCCTGAATTTTCCTGAATTT
TCCTGACAGTGGTGAACGAAAGTGAGTAGAGGCTATGAGGAAGGCAGGGG
AGATGGGAGATGAGATGCGATCGATGATTTCGCGAAATCCGTCCCGTCCC
GTCCCGTTGTGGTGTCGACGTAGCGCCGCGTGTAGTCTGCCGAGCACGGT
GTGAGGCAAGAGTAGATGAGCGCGGCGCCATTTTCGAATCGACCGCATTT
TTTCCTTTTTGGTTTTTGTGCGTGCAGCGCTCCGTCGCTTTCGGAAACGA
GTCTTTTTTTGTTGTCTTTCAAGACTATTATTGTAGTCGGCCGCCGTTTG
GCTTGTTTCTTTCTCTTCCCTCGTGGAGTGGATGCGCGGGCGGGTTGATC
TGATGAAAATGGTCCATGTTGACTGGGGGGGCGGATAAAGGGGCTCCGTG
AATCATAGTAGCGACGGACACAGGCCGAGCAGCTGAGCAAGTCGCAACGT
ACCTGGCCCGTCCGGTTACGCTGTCCGGCTCTTTTCTATTTTTTTCGTAC
GTCCGGGGACCACATTCCCGAAAGAAAATGAACCGCTGCTGCAGCATTGC
TGCTGCAGTTGTGCTGCTGGTGCTGCTGCTGAGGTGGCGGCTTTTGGGCT
CTATAACCAACGCGGAAGTGTCTCTTGCCTGACATTTGCTCTTGTCTTTT
TCCTTGTTTTGGTGCGATGGTAAAATGTTGCGCGCCCGTACTCTAGAGTG
TACGGTGGGGGCGGATTTGTGAGGTGGTAGTGGGTGGTGTTGCGTTTCGA
AATTTCTTACTCTTACTCTTCATTAGGTTGGCTGGGGTTGATTTTGATCG
GAGCTCTCCGTGTCGAGAAGTAGCGGCGGTGGCGGCCATATGCAGCACCA
CCTGTCTACAGCTTTTGCGAAGTTGTGTTTGTTTGTTATGCGGTGATACC
GAAGCGGTGCCAGAATTGGGACGCCATGGAGAGGTCGTGAGTAGCGACTG
AGGGACTGAGGGTCGAGATGCCG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1095:7934..19906-
>mRNA_E-siliculosus-1a_F_contig1095.656.1 ID=mRNA_E-siliculosus-1a_F_contig1095.656.1|Name=mRNA_E-siliculosus-1a_F_contig1095.656.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3138bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1095:7934..19906- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top